BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.1
(712 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT492391.1|DT492391 WS02550.C21_J07 PT-MB-N-A-15 Populus... 121 4e-026
gb|BI130842.1|BI130842 G111P55Y Populus cambium cDNA librar... 119 2e-025
gb|BI131004.1|BI131004 G113P83Y Populus cambium cDNA librar... 119 2e-025
gb|CK103353.1|CK103353 G113P83.5pR Populus tension wood cDN... 119 2e-025
gb|CN523107.1|CN523107 GQ0121.B3_P07 GQ012 Populus trichoca... 119 2e-025
gb|CN550020.1|CN550020 GQ0244.B3_O09 GQ024 Populus trichoca... 119 2e-025
gb|CV239377.1|CV239377 WS0232.B21_D10 PT-MB-A-13 Populus tr... 119 2e-025
gb|CV257965.1|CV257965 WS0248.B21_C10 PTxD-ICC-N-A-14 Popul... 119 2e-025
gb|CV268022.1|CV268022 WS0204.B21_F12 PTxN-IB-N-A-11 Populu... 119 2e-025
gb|CV270274.1|CV270274 WS0151.B21_I22 PTxN-IB-A-6 Populus t... 119 2e-025
gb|CX658618.1|CX658618 PO01020C01 Poplar SC cDNA library Po... 119 2e-025
gb|CX660139.1|CX660139 PO01018E03 Poplar SC cDNA library Po... 119 2e-025
gb|DT488453.1|DT488453 WS02536.B21_H15 PT-MB-N-A-15 Populus... 119 2e-025
gb|DT490426.1|DT490426 WS02544.B21_O23 PT-MB-N-A-15 Populus... 119 2e-025
gb|DT505387.1|DT505387 WS01810.C21_M15 PTxD-IL-N-A-9 Populu... 119 2e-025
gb|BI131177.1|BI131177 G116P53Y Populus cambium cDNA librar... 111 4e-023
gb|CV268026.1|CV268026 WS0204.B21_F16 PTxN-IB-N-A-11 Populu... 111 4e-023
gb|CB240357.1|CB240357 PopSC00336 Poplar SC cDNA library Po... 105 2e-021
gb|CK093269.1|CK093269 G113P83.3pR Populus tension wood cDN... 105 2e-021
gb|CV269179.1|CV269179 WS0207.B21_I16 PTxN-IB-N-A-11 Populu... 105 2e-021
gb|DT490352.1|DT490352 WS02544.B21_L15 PT-MB-N-A-15 Populus... 105 2e-021
gb|BU873007.1|BU873007 Q050B05 Populus flower cDNA library ... 92 3e-017
gb|AI165103.1|AI165103 A075p26u Hybrid aspen plasmid librar... 60 1e-007
gb|AI164690.1|AI164690 A067P26U Hybrid aspen plasmid librar... 58 5e-007
gb|BI135651.1|BI135651 F056P40Y Populus flower cDNA library... 56 2e-006
gb|CA824755.1|CA824755 R47H01 two-month-old roots from clon... 56 2e-006
gb|CN520341.1|CN520341 GQ0107.B3_N20 GQ010 Populus trichoca... 56 2e-006
gb|CV275354.1|CV275354 WS0176.B21_D04 PTxD-NR-A-8 Populus t... 56 2e-006
gb|CX653837.1|CX653837 PO02007H08 Poplar SC cDNA library Po... 56 2e-006
gb|CX655835.1|CX655835 PO02040G06 Poplar SC cDNA library Po... 56 2e-006
gb|CX658163.1|CX658163 PO01010E03 Poplar SC cDNA library Po... 56 2e-006
gb|DT494631.1|DT494631 WS01118.BR.1_P22 PT-P-FL-A-2 Populus... 56 2e-006
gb|DT496161.1|DT496161 WS01122.BR_J12 PT-P-FL-A-2 Populus t... 56 2e-006
gb|DT496675.1|DT496675 WS01124.BR_B23 PT-P-FL-A-2 Populus t... 56 2e-006
gb|DT499091.1|DT499091 WS0117.BR_E09 PT-P-FL-A-2 Populus tr... 56 2e-006
gb|DT501302.1|DT501302 WS01312.BR_E07 PTxD-IL-FL-A-4 Populu... 56 2e-006
gb|DT501617.1|DT501617 WS01313.BR_H19 PTxD-IL-FL-A-4 Populu... 56 2e-006
gb|DT501677.1|DT501677 WS01313.BR_M02 PTxD-IL-FL-A-4 Populu... 56 2e-006
gb|DT504166.1|DT504166 WS01312.B21_E07 PTxD-IL-FL-A-4 Popul... 56 2e-006
gb|DT504467.1|DT504467 WS01313.B21_H19 PTxD-IL-FL-A-4 Popul... 56 2e-006
gb|DT504537.1|DT504537 WS01313.B21_M02 PTxD-IL-FL-A-4 Popul... 56 2e-006
gb|BU837093.1|BU837093 T094E10 Populus apical shoot cDNA li... 54 7e-006
gb|CV281945.1|CV281945 WS0183.B21_E20 PTxD-IL-N-A-9 Populus... 54 7e-006
gb|BI128605.1|BI128605 G078P83Y Populus cambium cDNA librar... 52 3e-005
gb|CA930093.1|CA930093 MTU2CA.P7.A03 Aspen apex cDNA Librar... 52 3e-005
gb|CN522355.1|CN522355 GQ0124.B3_G19 GQ012 Populus trichoca... 52 3e-005
gb|CV279336.1|CV279336 WS0131.B21_E09 PTxD-IL-FL-A-4 Populu... 52 3e-005
gb|CX653768.1|CX653768 PO02007A04 Poplar SC cDNA library Po... 52 3e-005
gb|CX653937.1|CX653937 PO02010B08 Poplar SC cDNA library Po... 52 3e-005
gb|CX656405.1|CX656405 PO01001C09 Poplar SC cDNA library Po... 52 3e-005
gb|AI165025.1|AI165025 A073p46u Hybrid aspen plasmid librar... 50 1e-004
gb|BI136108.1|BI136108 F063P45Y Populus flower cDNA library... 50 1e-004
gb|CA822753.1|CA822753 R13C07 two-month-old roots from clon... 50 1e-004
gb|AI165639.1|AI165639 A087p56u Hybrid aspen plasmid librar... 48 5e-004
gb|BI135591.1|BI135591 F055P16Y Populus flower cDNA library... 48 5e-004
gb|BI136051.1|BI136051 F062P41Y Populus flower cDNA library... 48 5e-004
gb|BI137331.1|BI137331 F084P40Y Populus flower cDNA library... 48 5e-004
gb|BI137355.1|BI137355 F084P82Y Populus flower cDNA library... 48 5e-004
gb|BI137377.1|BI137377 F085P25Y Populus flower cDNA library... 48 5e-004
gb|BI137510.1|BI137510 F087P38Y Populus flower cDNA library... 48 5e-004
gb|BI137529.1|BI137529 F087P72Y Populus flower cDNA library... 48 5e-004
gb|BI137651.1|BI137651 F091P11Y Populus flower cDNA library... 48 5e-004
gb|BI137654.1|BI137654 F091P20Y Populus flower cDNA library... 48 5e-004
gb|BI137682.1|BI137682 F091P74Y Populus flower cDNA library... 48 5e-004
gb|BI137893.1|BI137893 F095P14Y Populus flower cDNA library... 48 5e-004
gb|BU868351.1|BU868351 M114G11 Populus flower cDNA library ... 48 5e-004
gb|CV247685.1|CV247685 WS01118.B21_P22 PT-P-FL-A-2 Populus ... 48 5e-004
gb|CV263422.1|CV263422 WS02021.B21_I06 PTxN-IB-N-A-11 Popul... 48 5e-004
gb|DT482029.1|DT482029 WS02533.BR_K20 PT-MB-N-A-15 Populus ... 48 5e-004
gb|DT487430.1|DT487430 WS02533.B21_K20 PT-MB-N-A-15 Populus... 48 5e-004
gb|DT492926.1|DT492926 WS02552.C21_N23 PT-MB-N-A-15 Populus... 48 5e-004
gb|DT516467.1|DT516467 WS02431.B21_H20 PTxD-ICC-N-A-14 Popu... 48 5e-004
gb|BI137539.1|BI137539 F087P86Y Populus flower cDNA library... 46 0.002
gb|AI162701.1|AI162701 A022P16U Hybrid aspen plasmid librar... 44 0.007
gb|BU810229.1|BU810229 UL67H05 Populus leaf cDNA library Po... 44 0.007
gb|CV232172.1|CV232172 WS0196.B21_M10 PT-DX-N-A-10 Populus ... 44 0.007
gb|BI135903.1|BI135903 F060P04Y Populus flower cDNA library... 42 0.028
gb|BI136605.1|BI136605 F070P60Y Populus flower cDNA library... 42 0.028
gb|BI137604.1|BI137604 F089P21Y Populus flower cDNA library... 42 0.028
gb|CV257947.1|CV257947 WS0248.B21_B12 PTxD-ICC-N-A-14 Popul... 42 0.028
gb|BI131147.1|BI131147 G116P14Y Populus cambium cDNA librar... 40 0.11
gb|BI135567.1|BI135567 F054P78Y Populus flower cDNA library... 40 0.11
gb|BI135916.1|BI135916 F060P38Y Populus flower cDNA library... 40 0.11
gb|BI137548.1|BI137548 F088P02Y Populus flower cDNA library... 40 0.11
gb|CK116122.1|CK116122 Y020C08 Populus infected leaf substr... 40 0.11
gb|CV247405.1|CV247405 WS01118.B21_A19 PT-P-FL-A-2 Populus ... 40 0.11
gb|CV253836.1|CV253836 WS0223.B21_C20 PTxD-ICC-A-12 Populus... 40 0.11
gb|CV258455.1|CV258455 WS0249.B21_J12 PTxD-ICC-N-A-14 Popul... 40 0.11
gb|CV267416.1|CV267416 WS02031.B21_K24 PTxN-IB-N-A-11 Popul... 40 0.11
gb|DT490725.1|DT490725 WS02545.B21_M09 PT-MB-N-A-15 Populus... 40 0.11
gb|DT494310.1|DT494310 WS01118.BR.1_A19 PT-P-FL-A-2 Populus... 40 0.11
gb|AI161494.1|AI161494 A001P58U Hybrid aspen plasmid librar... 38 0.44
gb|CK087259.1|CK087259 A001P58.3pR Hybrid aspen plasmid lib... 38 0.44
gb|CK098006.1|CK098006 A001P58.5pR Hybrid aspen plasmid lib... 38 0.44
gb|AJ769468.1|AJ769468 AJ769468 Populus euphratica leaf 3-6... 38 0.44
gb|AJ769520.1|AJ769520 AJ769520 Populus euphratica leaf 3-6... 38 0.44
gb|CV262689.1|CV262689 WS0202.B21_D24 PTxN-IB-N-A-11 Populu... 38 0.44
gb|CV268211.1|CV268211 WS0204.B21_N19 PTxN-IB-N-A-11 Populu... 38 0.44
gb|CV269846.1|CV269846 WS0209.B21_G11 PTxN-IB-N-A-11 Populu... 38 0.44
gb|CV271913.1|CV271913 WS0156.B21.1_A15 PTxN-IB-A-6 Populus... 38 0.44
gb|CV272314.1|CV272314 WS0157.B21_E13 PTxN-IB-A-6 Populus t... 38 0.44
gb|CV274680.1|CV274680 WS0174.B21.1_A20 PTxD-NR-A-8 Populus... 38 0.44
gb|CV283479.1|CV283479 WS0187.B21_H06 PTxD-IL-N-A-9 Populus... 38 0.44
gb|CV283885.1|CV283885 WS0188.B21_I24 PTxD-IL-N-A-9 Populus... 38 0.44
gb|CX172697.1|CX172697 C03_69-5_05.ab1 leaf inoculated with... 38 0.44
gb|CX176227.1|CX176227 F05_69-89_11.ab1 leaf inoculated wit... 38 0.44
gb|BP924579.1|BP924579 BP924579 full-length enriched poplar... 38 0.44
gb|DT505548.1|DT505548 WS01811.C21_D16 PTxD-IL-N-A-9 Populu... 38 0.44
gb|DT507161.1|DT507161 WS02417.BR_I08 PTxD-ICC-N-A-14 Popul... 38 0.44
gb|DT511814.1|DT511814 WS02417.B21_I08 PTxD-ICC-N-A-14 Popu... 38 0.44
gb|DT521636.1|DT521636 WS02034.B21_N05 PTxN-IB-N-A-11 Popul... 38 0.44
gb|DT525387.1|DT525387 WS02045.C21_D11 PTxN-IB-N-A-11 Popul... 38 0.44
>gb|DT492391.1|DT492391 WS02550.C21_J07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_J07 3', mRNA sequence
Length = 683
Score = 121 bits (61), Expect = 4e-026
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 65 agggcgagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcc 124
|||| ||||||||||| || |||||||| || |||| || || ||||| ||||| ||||
Sbjct: 645 agggagagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcc 586
Query: 125 tcgagttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaaga 184
| ||||||||| |||| || || ||||||||||| |||||||||||||| |||||||| |
Sbjct: 585 tggagttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaa 526
Query: 185 acgacaccatgatccgcaaggaggtcttc 213
||||||||||||| ||||| || ||||||
Sbjct: 525 acgacaccatgattcgcaaagaagtcttc 497
>gb|BI130842.1|BI130842 G111P55Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 449
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 27 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 86
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 87 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 146
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 147 accatgattcgcaaagaagtcttc 170
Score = 40.1 bits (20), Expect = 0.11
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 378 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 437
Query: 481 ttcaagatcaag 492
||||| ||||||
Sbjct: 438 ttcaaaatcaag 449
>gb|BI131004.1|BI131004 G113P83Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 525
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 26 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 85
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 86 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 145
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 146 accatgattcgcaaagaagtcttc 169
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 377 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 436
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 437 ttcaaaatcaagcc 450
>gb|CK103353.1|CK103353 G113P83.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G113P83 5', mRNA sequence
Length = 535
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 26 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 85
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 86 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 145
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 146 accatgattcgcaaagaagtcttc 169
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 377 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 436
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 437 ttcaaaatcaagcc 450
>gb|CN523107.1|CN523107 GQ0121.B3_P07 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_P07 5', mRNA sequence
Length = 291
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 33 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 92
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 93 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 152
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 153 accatgattcgcaaagaagtcttc 176
>gb|CN550020.1|CN550020 GQ0244.B3_O09 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_O09 5', mRNA sequence
Length = 699
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 60 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 119
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 120 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 179
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 180 accatgattcgcaaagaagtcttc 203
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 411 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 470
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 471 ttcaaaatcaagcc 484
>gb|CV239377.1|CV239377 WS0232.B21_D10 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_D10
3', mRNA sequence
Length = 764
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 714 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 655
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 654 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 595
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 594 accatgattcgcaaagaagtcttc 571
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 363 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 304
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 303 ttcaaaatcaagcc 290
>gb|CV257965.1|CV257965 WS0248.B21_C10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_C10 3', mRNA sequence
Length = 782
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 746 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 687
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 686 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 627
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 626 accatgattcgcaaagaagtcttc 603
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 336
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 335 ttcaaaatcaagcc 322
>gb|CV268022.1|CV268022 WS0204.B21_F12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_F12 3', mRNA sequence
Length = 788
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 780 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 721
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 720 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 661
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 660 accatgattcgcaaagaagtcttc 637
>gb|CV270274.1|CV270274 WS0151.B21_I22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_I22 3', mRNA sequence
Length = 774
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 737 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 678
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 677 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 618
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 617 accatgattcgcaaagaagtcttc 594
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 386 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 327
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 326 ttcaaaatcaagcc 313
>gb|CX658618.1|CX658618 PO01020C01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020C01 5', mRNA sequence
Length = 587
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 44 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 103
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 104 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 163
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 164 accatgattcgcaaagaagtcttc 187
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 454
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 455 ttcaaaatcaagcc 468
>gb|CX660139.1|CX660139 PO01018E03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01018E03 5', mRNA sequence
Length = 727
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 44 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 103
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 104 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 163
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 164 accatgattcgcaaagaagtcttc 187
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 395 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 454
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 455 ttcaaaatcaagcc 468
>gb|DT488453.1|DT488453 WS02536.B21_H15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02536_H15 3', mRNA sequence
Length = 799
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 738 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 679
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 678 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 619
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 618 accatgattcgcaaagaagtcttc 595
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 387 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 328
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 327 ttcaaaatcaagcc 314
>gb|DT490426.1|DT490426 WS02544.B21_O23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_O23 3', mRNA sequence
Length = 730
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 702 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 643
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 642 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 583
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 582 accatgattcgcaaagaagtcttc 559
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 351 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 292
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 291 ttcaaaatcaagcc 278
>gb|DT505387.1|DT505387 WS01810.C21_M15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01810_M15 3', mRNA sequence
Length = 760
Score = 119 bits (60), Expect = 2e-025
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 724 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 665
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 664 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 605
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 604 accatgattcgcaaagaagtcttc 581
>gb|BI131177.1|BI131177 G116P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 445
Score = 111 bits (56), Expect = 4e-023
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||| |||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 17 gagttcgaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 76
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 77 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 136
Query: 190 accatgatccgcaaggaggtcttc 213
|||||||| ||||| || ||||||
Sbjct: 137 accatgattcgcaaagaagtcttc 160
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 370 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 429
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 430 ttcaaaatcaagcc 443
>gb|CV268026.1|CV268026 WS0204.B21_F16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_F16 3', mRNA sequence
Length = 792
Score = 111 bits (56), Expect = 4e-023
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 780 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 721
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 720 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 661
Query: 190 accatgatccgcaaggaggtcttc 213
||||||| ||||| || ||||||
Sbjct: 660 cccatgattcgcaaagaagtcttc 637
>gb|CB240357.1|CB240357 PopSC00336 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00336, mRNA sequence
Length = 445
Score = 105 bits (53), Expect = 2e-021
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 109 ttcgggcacgagttcctcgagttcgagctccgccccgacggcaagctccgctacgccaac 168
||||| ||||| ||||| ||||||||| |||| || || ||||||||||| |||||||||
Sbjct: 2 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 61
Query: 169 aactccaactacaagaacgacaccatgatccgcaaggaggtcttc 213
||||| |||||||| |||||||||||||| ||||| || ||||||
Sbjct: 62 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttc 106
>gb|CK093269.1|CK093269 G113P83.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G113P83 3', mRNA sequence
Length = 764
Score = 105 bits (53), Expect = 2e-021
Identities = 123/145 (84%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
||||||||||| || |||||||| || |||| || || ||||| ||||| ||||| |||
Sbjct: 739 gagttctaccttcgttactacgtaggtcacagaggtaaattcggtcacgaattcctggag 680
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacga- 188
|||||| |||| || || ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 679 ttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaacgac 620
Query: 189 caccatgatccgcaaggaggtcttc 213
||||||||| ||||| || ||||||
Sbjct: 619 caccatgattcgcaaagaagtcttc 595
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 387 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 328
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 327 ttcaaaatcaagcc 314
>gb|CV269179.1|CV269179 WS0207.B21_I16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_I16 3', mRNA sequence
Length = 719
Score = 105 bits (53), Expect = 2e-021
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 109 ttcgggcacgagttcctcgagttcgagctccgccccgacggcaagctccgctacgccaac 168
||||| ||||| ||||| ||||||||| |||| || || ||||||||||| |||||||||
Sbjct: 698 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 639
Query: 169 aactccaactacaagaacgacaccatgatccgcaaggaggtcttc 213
||||| |||||||| |||||||||||||| ||||| || ||||||
Sbjct: 638 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttc 594
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 386 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 327
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 326 ttcaaaatcaagcc 313
>gb|DT490352.1|DT490352 WS02544.B21_L15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_L15 3', mRNA sequence
Length = 731
Score = 105 bits (53), Expect = 2e-021
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 109 ttcgggcacgagttcctcgagttcgagctccgccccgacggcaagctccgctacgccaac 168
||||| ||||| ||||| ||||||||| |||| || || ||||||||||| |||||||||
Sbjct: 704 ttcggtcacgaattcctggagttcgagttccgtccagatggcaagctccgatacgccaac 645
Query: 169 aactccaactacaagaacgacaccatgatccgcaaggaggtcttc 213
||||| |||||||| |||||||||||||| ||||| || ||||||
Sbjct: 644 aactctaactacaaaaacgacaccatgattcgcaaagaagtcttc 600
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 392 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 333
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 332 ttcaaaatcaagcc 319
>gb|BU873007.1|BU873007 Q050B05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 446
Score = 91.7 bits (46), Expect = 3e-017
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 127 gagttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaac 186
||||||||| |||| || || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 54 gagttcgagttccgtccagatggcaagctccgatacgccaacaactctaactacaaaaac 113
Query: 187 gacaccatgatccgcaaggaggtctt 212
||||||||||| ||||| || |||||
Sbjct: 114 gacaccatgattcgcaaagaagtctt 139
>gb|AI165103.1|AI165103 A075p26u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 266
Score = 60.0 bits (30), Expect = 1e-007
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 12 gagttctatcttcgttactacgttggtcacagaggnaaattcggncacgaattcttggaa 71
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 72 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 131
Query: 190 accatgat 197
||||||||
Sbjct: 132 accatgat 139
>gb|AI164690.1|AI164690 A067P26U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 412
Score = 58.0 bits (29), Expect = 5e-007
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 43 gagttctatcttcgntactacgttggtcacagaggtaaattcggtcacgaattcttggaa 102
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 103 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 162
Query: 190 accatgat 197
||||||||
Sbjct: 163 accatgat 170
>gb|BI135651.1|BI135651 F056P40Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 570
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 5 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 64
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 65 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 124
Query: 190 accatgat 197
||||||||
Sbjct: 125 accatgat 132
>gb|CA824755.1|CA824755 R47H01 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 292
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 41 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 100
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 101 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 160
Query: 190 accatgat 197
||||||||
Sbjct: 161 accatgat 168
>gb|CN520341.1|CN520341 GQ0107.B3_N20 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_N20 5', mRNA sequence
Length = 771
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 60 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 119
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 120 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 179
Query: 190 accatgat 197
||||||||
Sbjct: 180 accatgat 187
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 411 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 470
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 471 ttcaaaatcaagcc 484
>gb|CV275354.1|CV275354 WS0176.B21_D04 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0176_D04 3', mRNA sequence
Length = 757
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 733 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 674
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 673 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 614
Query: 190 accatgat 197
||||||||
Sbjct: 613 accatgat 606
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 382 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 323
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 322 ttcaaaatcaagcc 309
>gb|CX653837.1|CX653837 PO02007H08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02007H08 5', mRNA sequence
Length = 385
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 54 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 113
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 114 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 173
Query: 190 accatgat 197
||||||||
Sbjct: 174 accatgat 181
Score = 40.1 bits (20), Expect = 0.11
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 268 atgaaggaggacgacagcaactggcccgagcccgaccgcatcggccgccaggagctcgag 327
|||||||| || |||| ||||||||| ||||| ||||| | || | || ||||| |||
Sbjct: 252 atgaaggaagatgacaacaactggccagagccggaccgggttgggaggcaagagctggag 311
Query: 328 atcgtcatgggcaacgagcacatttcattcac 359
|| || ||||| || ||||| |||||||||||
Sbjct: 312 attgtgatggggaatgagcatatttcattcac 343
>gb|CX655835.1|CX655835 PO02040G06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02040G06 5', mRNA sequence
Length = 230
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 2 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 61
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 62 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 121
Query: 190 accatgat 197
||||||||
Sbjct: 122 accatgat 129
>gb|CX658163.1|CX658163 PO01010E03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01010E03 5', mRNA sequence
Length = 307
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 41 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 100
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 101 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 160
Query: 190 accatgat 197
||||||||
Sbjct: 161 accatgat 168
>gb|DT494631.1|DT494631 WS01118.BR.1_P22 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_P22 5', mRNA sequence
Length = 824
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 79 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 138
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 139 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 198
Query: 190 accatgat 197
||||||||
Sbjct: 199 accatgat 206
>gb|DT496161.1|DT496161 WS01122.BR_J12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_J12 5', mRNA sequence
Length = 764
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 32 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 91
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 92 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 151
Query: 190 accatgat 197
||||||||
Sbjct: 152 accatgat 159
>gb|DT496675.1|DT496675 WS01124.BR_B23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_B23 5', mRNA sequence
Length = 824
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 79 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 138
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 139 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 198
Query: 190 accatgat 197
||||||||
Sbjct: 199 accatgat 206
>gb|DT499091.1|DT499091 WS0117.BR_E09 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0117_E09
5', mRNA sequence
Length = 542
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 38 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 97
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 98 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 157
Query: 190 accatgat 197
||||||||
Sbjct: 158 accatgat 165
>gb|DT501302.1|DT501302 WS01312.BR_E07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_E07 5', mRNA sequence
Length = 598
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 79 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 138
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 139 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 198
Query: 190 accatgat 197
||||||||
Sbjct: 199 accatgat 206
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 430 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 489
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 490 ttcaaaatcaagcc 503
>gb|DT501617.1|DT501617 WS01313.BR_H19 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H19 5', mRNA sequence
Length = 809
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 79 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 138
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 139 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 198
Query: 190 accatgat 197
||||||||
Sbjct: 199 accatgat 206
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 430 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 489
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 490 ttcaaaatcaagcc 503
>gb|DT501677.1|DT501677 WS01313.BR_M02 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_M02 5', mRNA sequence
Length = 809
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 79 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 138
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 139 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 198
Query: 190 accatgat 197
||||||||
Sbjct: 199 accatgat 206
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 430 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 489
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 490 ttcaaaatcaagcc 503
>gb|DT504166.1|DT504166 WS01312.B21_E07 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_E07 3', mRNA sequence
Length = 809
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 731 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 672
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 671 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 612
Query: 190 accatgat 197
||||||||
Sbjct: 611 accatgat 604
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 380 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 321
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 320 ttcaaaatcaagcc 307
>gb|DT504467.1|DT504467 WS01313.B21_H19 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_H19 3', mRNA sequence
Length = 809
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 731 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 672
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 671 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 612
Query: 190 accatgat 197
||||||||
Sbjct: 611 accatgat 604
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 380 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 321
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 320 ttcaaaatcaagcc 307
>gb|DT504537.1|DT504537 WS01313.B21_M02 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_M02 3', mRNA sequence
Length = 809
Score = 56.0 bits (28), Expect = 2e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 731 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 672
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 671 ttcgagttccggcctgatggaaaactccgatacgcaaacaactctaattacaaaaacgac 612
Query: 190 accatgat 197
||||||||
Sbjct: 611 accatgat 604
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 380 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 321
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 320 ttcaaaatcaagcc 307
>gb|BU837093.1|BU837093 T094E10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 579
Score = 54.0 bits (27), Expect = 7e-006
Identities = 177/227 (77%)
Strand = Plus / Plus
Query: 268 atgaaggaggacgacagcaactggcccgagcccgaccgcatcggccgccaggagctcgag 327
|||||||| || |||| ||||||||| ||||| ||||| | || | || ||||| |||
Sbjct: 286 atgaaggaagatgacaacaactggccagagccggaccgggttgggaggcaagagctggag 345
Query: 328 atcgtcatgggcaacgagcacatttcattcaccacttccaagatcggctccctcgtcgat 387
|| || ||||| || ||||| ||||||||||| || || ||||| || || || || |||
Sbjct: 346 attgtgatggggaatgagcatatttcattcactacgtctaagattggatcacttgttgat 405
Query: 388 gtccagtccagcaaggacccggagggcctccggatcttctactaccttgtccaggatctg 447
|| || ||| |||| || || || || || |||||||| || ||||| ||||| ||
Sbjct: 406 gttcacagtagccaggatcctgaagggcttcgcatcttctattatcttgttcaggacttg 465
Query: 448 aagtgtttcgtgttctcgctcatcaaccttcacttcaagatcaagcc 494
||||| || || ||||| |||||| |||||||||||| ||||||||
Sbjct: 466 aagtgctttgttttctctctcatctcccttcacttcaaaatcaagcc 512
Score = 48.1 bits (24), Expect = 5e-004
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 70 gagttctacctgcgctactacgtgggacacaagggcaagttcgggcacgagttcctcgag 129
|||||||| || || |||||||| || |||| || || ||||| ||||| ||| | ||
Sbjct: 88 gagttctatcttcgttactacgttggtcacagaggtaaattcggtcacgaattcttggaa 147
Query: 130 ttcgagctccgccccgacggcaagctccgctacgccaacaactccaactacaagaacgac 189
|||||| |||| || || || || ||||| |||| |||||||| || ||||| ||||||
Sbjct: 148 ttcgagttccggcctgatggaaaactccgatacgtaaacaactctaattacaaaaacgac 207
Query: 190 accatgat 197
||||||||
Sbjct: 208 accatgat 215
>gb|CV281945.1|CV281945 WS0183.B21_E20 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0183_E20 3', mRNA sequence
Length = 884
Score = 54.0 bits (27), Expect = 7e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 167 acaactccaactacaagaacgacaccatgatccgcaaggaggtcttc 213
||||||| |||||||| |||||||||||||| ||||| || ||||||
Sbjct: 884 acaactctaactacaaaaacgacaccatgattcgcaaagaagtcttc 838
Score = 44.1 bits (22), Expect = 0.007
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||||||||| ||||||| || || ||||| |||||| || |||
Sbjct: 630 atcttctattatcttgtccaggacttgaagtgctttgttttctctctcatctctctccac 571
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 570 ttcaaaatcaagcc 557
>gb|BI128605.1|BI128605 G078P83Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 508
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 358 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 299
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 298 ttcaaaatcaagcc 285
>gb|CA930093.1|CA930093 MTU2CA.P7.A03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 664
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 361 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 302
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 301 ttcaaaatcaagcc 288
Score = 48.1 bits (24), Expect = 5e-004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 154 ctccgctacgccaacaactccaactacaagaacgacaccatgat 197
||||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 628 ctccgatacgcaaacaactctaattacaaaaacgacaccatgat 585
>gb|CN522355.1|CN522355 GQ0124.B3_G19 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0124_G19 5', mRNA sequence
Length = 472
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 304 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 363
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 364 ttcaaaatcaagcc 377
Score = 48.1 bits (24), Expect = 5e-004
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 154 ctccgctacgccaacaactccaactacaagaacgacaccatgat 197
||||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 37 ctccgatacgcaaacaactctaattacaaaaacgacaccatgat 80
>gb|CV279336.1|CV279336 WS0131.B21_E09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0131_E09 3', mRNA sequence
Length = 529
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 380 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 321
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 320 ttcaaaatcaagcc 307
>gb|CX653768.1|CX653768 PO02007A04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02007A04 5', mRNA sequence
Length = 613
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 362 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 421
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 422 ttcaaaatcaagcc 435
>gb|CX653937.1|CX653937 PO02010B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02010B08 5', mRNA sequence
Length = 630
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 385 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 444
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 445 ttcaaaatcaagcc 458
Score = 50.1 bits (25), Expect = 1e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 109 ttcgggcacgagttcctcgagttcgagctccgccccgacggcaagctccgctacgccaac 168
||||| ||||| ||| | || |||||| |||| || || || || ||||| ||||| |||
Sbjct: 73 ttcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatacgcaaac 132
Query: 169 aactccaactacaagaacgacaccatgat 197
||||| || ||||| ||||||||||||||
Sbjct: 133 aactctaattacaaaaacgacaccatgat 161
>gb|CX656405.1|CX656405 PO01001C09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001C09 5', mRNA sequence
Length = 445
Score = 52.0 bits (26), Expect = 3e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atcttctactaccttgtccaggatctgaagtgtttcgtgttctcgctcatcaaccttcac 480
|||||||| || ||||| ||||| ||||||| || || ||||| |||||| |||||||
Sbjct: 82 atcttctattatcttgttcaggacttgaagtgctttgttttctctctcatctcccttcac 141
Query: 481 ttcaagatcaagcc 494
||||| ||||||||
Sbjct: 142 ttcaaaatcaagcc 155
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 64,196
Number of Sequences: 369679
Number of extensions: 64196
Number of successful extensions: 16915
Number of sequences better than 0.5: 112
Number of HSP's better than 0.5 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16769
Number of HSP's gapped (non-prelim): 146
length of query: 712
length of database: 203,408,664
effective HSP length: 19
effective length of query: 693
effective length of database: 196,384,763
effective search space: 136094640759
effective search space used: 136094640759
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)