BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.4
(667 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 139 2e-031
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 127 6e-028
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 125 2e-027
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 125 2e-027
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 119 1e-025
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 119 1e-025
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 119 1e-025
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 111 3e-023
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 105 2e-021
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 103 8e-021
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 103 8e-021
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 103 8e-021
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 103 8e-021
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 103 8e-021
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 100 1e-019
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 100 1e-019
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 100 1e-019
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 100 1e-019
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 100 1e-019
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 96 2e-018
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 96 2e-018
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 94 8e-018
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 94 8e-018
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 88 5e-016
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 80 1e-013
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 80 1e-013
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 80 1e-013
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 80 1e-013
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 80 1e-013
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 80 1e-013
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 80 1e-013
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 78 5e-013
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 78 5e-013
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 76 2e-012
gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Po... 74 8e-012
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 74 8e-012
gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid librar... 72 3e-011
gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA librar... 72 3e-011
gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Po... 72 3e-011
gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA librar... 72 3e-011
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 72 3e-011
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 72 3e-011
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 72 3e-011
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 72 3e-011
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 72 3e-011
gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus ... 72 3e-011
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 72 3e-011
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 72 3e-011
gb|DT526486.1|DT526486 WS02048.C21_C18 PTxN-IB-N-A-11 Popul... 72 3e-011
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 72 3e-011
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 72 3e-011
gb|DT469902.1|DT469902 WS01919.C21_E06 PT-DX-N-A-10 Populus... 70 1e-010
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 68 5e-010
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 68 5e-010
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 68 5e-010
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 68 5e-010
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 68 5e-010
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 68 5e-010
gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Po... 66 2e-009
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 64 7e-009
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 64 7e-009
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 64 7e-009
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 64 7e-009
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 64 7e-009
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 62 3e-008
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 62 3e-008
gb|DT469819.1|DT469819 WS01918.C21_P21 PT-DX-N-A-10 Populus... 58 4e-007
gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Popul... 58 4e-007
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 52 3e-005
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 48 4e-004
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 48 4e-004
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 44 0.007
gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library ... 44 0.007
gb|CV225999.1|CV225999 WS0162.B21_P23 PT-DX-A-7 Populus tri... 44 0.007
gb|BU897334.1|BU897334 X055D05 Populus wood cDNA library Po... 42 0.027
gb|CA933471.1|CA933471 MTU5CS.P8.E06 Aspen stem cDNA Librar... 42 0.027
gb|CF118925.1|CF118925 MTU10CS.P11.C02 Aspen stem cDNA Libr... 42 0.027
gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal libra... 42 0.027
gb|AJ534481.1|AJ534481 AJ534481 Populus euphratica root and... 40 0.11
gb|CA924833.1|CA924833 MTU7TL.P10.B12 Aspen leaf cDNA Libra... 38 0.42
gb|CA925020.1|CA925020 MTU7TL.P12.F05 Aspen leaf cDNA Libra... 38 0.42
gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library... 38 0.42
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloide... 38 0.42
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 139 bits (70), Expect = 2e-031
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 397 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 338
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaatt 215
|||||||| || || ||||||||||||||| | ||||||||||||||||||||||| |||
Sbjct: 337 gtccatctttacccgttcctcaaaggtttgatggggaggcaaaacaggacaccgactatt 278
Query: 216 gt 217
||
Sbjct: 277 gt 276
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 127 bits (64), Expect = 6e-028
Identities = 150/179 (83%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 420 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 479
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaatt 215
|||||||| || || |||||||||||| | | ||||||||||||||||||||||| |||
Sbjct: 480 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgactatt 539
Query: 216 gtcatcgtctggtccatcctgctggcttcaatcttctcactcctttgggttcggattga 274
|| | | ||||| || |||||||| |||||||| | |||||||||||||||||
Sbjct: 540 gtggttatatggtcagngctcctggcttccatcttctccttgctttgggttcggattga 598
>gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 486
Score = 125 bits (63), Expect = 2e-027
Identities = 150/179 (83%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 37 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 96
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaatt 215
|||||||| || || |||||||||||| | | ||||||||||||||||||||||| |||
Sbjct: 97 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgactatt 156
Query: 216 gtcatcgtctggtccatcctgctggcttcaatcttctcactcctttgggttcggattga 274
|| | | ||||| | || |||||||| |||||||| | |||||||| ||||||||
Sbjct: 157 gtggttatatggtcagtgctcctggcttccatcttctccttgctttgggtccggattga 215
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 125 bits (63), Expect = 2e-027
Identities = 150/179 (83%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 2883 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 2942
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaatt 215
|||||||| || || |||||||||||| | | ||||||||||||||||||||||| |||
Sbjct: 2943 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgactatt 3002
Query: 216 gtcatcgtctggtccatcctgctggcttcaatcttctcactcctttgggttcggattga 274
|| | | ||||| | || |||||||| |||||||| | |||||||| ||||||||
Sbjct: 3003 gtggttatatggtcagtgctcctggcttccatcttctccttgctttgggtccggattga 3061
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 119 bits (60), Expect = 1e-025
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 394 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 453
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgac 211
|||||||| || || |||||||||||| | | |||||||||||||||||||||||
Sbjct: 454 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgac 509
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 119 bits (60), Expect = 1e-025
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 125 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 184
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgac 211
|||||||| || || |||||||||||| | | |||||||||||||||||||||||
Sbjct: 185 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgac 240
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 119 bits (60), Expect = 1e-025
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 96 aatggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgatt 155
||||| ||| |||||||||| || || |||||||||||||||||||| || |||||||||
Sbjct: 249 aatgggtaccagtcatggggacctctattcgggaagctcttctttgccttctgggtgatt 308
Query: 156 gtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgac 211
|||||||| || || |||||||||||| | | |||||||||||||||||||||||
Sbjct: 309 gtccatctctacccattcctcaaaggtctaatggggaggcaaaacaggacaccgac 364
>gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004B05F1, mRNA sequence
Length = 634
Score = 111 bits (56), Expect = 3e-023
Identities = 98/112 (87%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || |||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 255 agtcatggggacctctattcgggaagctcttctttgccttctgggtgattgtccatctct 314
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 315 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 366
>gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 441
Score = 105 bits (53), Expect = 2e-021
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 52 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 111
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtc 218
| || |||||||||||| | | |||||||||||||||||||| || ||||||
Sbjct: 112 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgtc 164
>gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 490
Score = 103 bits (52), Expect = 8e-021
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 123 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 182
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 183 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 234
>gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 367
Score = 103 bits (52), Expect = 8e-021
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 13 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 72
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 73 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 124
>gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P74 5', mRNA sequence
Length = 389
Score = 103 bits (52), Expect = 8e-021
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 123 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 182
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 183 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 234
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 103 bits (52), Expect = 8e-021
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 416 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 475
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 476 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 527
>gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_B11 3', mRNA sequence
Length = 720
Score = 103 bits (52), Expect = 8e-021
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || || || ||||||||||||||||| || ||||||||||||||||| |
Sbjct: 575 agtcatggggacctctatttgggaagctcttctttgccttctgggtgattgtccatctct 634
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||| | | |||||||||||||||||||| || |||||
Sbjct: 635 acccattcctcaaaggtctaatggggaggcaaaacaggacacccactattgt 686
>gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 3', mRNA sequence
Length = 481
Score = 99.6 bits (50), Expect = 1e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 439 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctttggcaag 380
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
||||||||||| ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 379 ctcttctttgctatttgggtcattgcccatttgtatcctttcctcaagggtttgctgggt 320
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 319 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 282
>gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_K05 3', mRNA sequence
Length = 513
Score = 99.6 bits (50), Expect = 1e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 485 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctttggcaag 426
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
||||||||||| ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 425 ctcttctttgctatttgggtcattgcccatttgtatcctttcctcaagggtttgttgggt 366
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 365 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 328
>gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E11 3', mRNA sequence
Length = 774
Score = 99.6 bits (50), Expect = 1e-019
Identities = 131/158 (82%)
Strand = Plus / Minus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 530 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctttggcaag 471
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
||||||||||| ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 470 ctcttctttgctatttgggtcattgcccatttgtatcctttcctcaagggtttgttgggt 411
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 410 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 373
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 99.6 bits (50), Expect = 1e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 266 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctttggcaag 325
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
||||||||||| ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 326 ctcttctttgctatttgggtcattgcccatttgtatcctttcctcaagggtttgttgggt 385
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 386 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 423
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 99.6 bits (50), Expect = 1e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 3022 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctttggcaag 3081
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
||||||||||| ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 3082 ctcttctttgctatttgggtcattgcccatttgtatcctttcctcaagggtttgctgggt 3141
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 3142 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 3179
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 882
Score = 95.6 bits (48), Expect = 2e-018
Identities = 111/132 (84%)
Strand = Plus / Plus
Query: 98 tggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgt 157
||||||| |||||||||| || ||||| || |||||||||||||| ||||||| ||||
Sbjct: 669 tggataccagtcatggggtcctctctttggcaagctcttctttgctatttgggtcattgc 728
Query: 158 ccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
|||| ||||||| |||||||| |||||| | || ||||||| | || || ||||||||
Sbjct: 729 ccatttgtatcctttcctcaagggtttgttgggtcggcaaaatcgaacgccaacaattgt 788
Query: 218 catcgtctggtc 229
||||||||||||
Sbjct: 789 catcgtctggtc 800
>gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0184_J19 3', mRNA sequence
Length = 573
Score = 95.6 bits (48), Expect = 2e-018
Identities = 111/132 (84%)
Strand = Plus / Minus
Query: 98 tggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgt 157
||||||| |||||||||| || ||||| || |||||||||||||| ||||||| ||||
Sbjct: 456 tggataccagtcatggggtcctctctttggcaagctcttctttgctatttgggtcattgc 397
Query: 158 ccatctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgt 217
|||| ||||||| |||||||| |||||| | || ||||||| | || || ||||||||
Sbjct: 396 ccatttgtatcctttcctcaagggtttgttgggtcggcaaaatcgaacgccaacaattgt 337
Query: 218 catcgtctggtc 229
||||||||||||
Sbjct: 336 catcgtctggtc 325
>gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 3', mRNA sequence
Length = 684
Score = 93.7 bits (47), Expect = 8e-018
Identities = 110/131 (83%)
Strand = Plus / Minus
Query: 99 ggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtc 158
|||||| |||||||||| || ||||| || |||||||||||||| ||||||| |||| |
Sbjct: 575 ggataccagtcatggggtcctctctttggcaagctcttctttgctatttgggtcattgcc 516
Query: 159 catctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtc 218
||| ||||||| |||||||| |||||| | || ||||||| | || || |||||||||
Sbjct: 515 catttgtatcctttcctcaagggtttgctgggtcggcaaaatcgtacgccaacaattgtc 456
Query: 219 atcgtctggtc 229
|||||||||||
Sbjct: 455 atcgtctggtc 445
>gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 5', mRNA sequence
Length = 448
Score = 93.7 bits (47), Expect = 8e-018
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 99 ggatacgagtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtc 158
|||||| |||||||||| || ||||| || |||||||||||||| ||||||| |||| |
Sbjct: 111 ggataccagtcatggggtcctctctttggcaagctcttctttgctatttgggtcattgcc 170
Query: 159 catctgtatcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtc 218
||| ||||||| |||||||| |||||| | || ||||||| | || || |||||||||
Sbjct: 171 catttgtatcctttcctcaagggtttgctgggtcggcaaaatcgtacgccaacaattgtc 230
Query: 219 atcgtctggtc 229
|||||||||||
Sbjct: 231 atcgtctggtc 241
>gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0015_I21 3', mRNA sequence
Length = 667
Score = 87.7 bits (44), Expect = 5e-016
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || ||||| || |||||||||||||| ||||||| |||| |||| |||
Sbjct: 666 agtcatggggtcctctctttggcaagctcttctttgctatttgggtcattgcccatttgt 607
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtcatcgtct 225
|||| |||||||| |||||| | || ||||||| | || || ||||||||||||||||
Sbjct: 606 atcctttcctcaagggtttgttgggtcggcaaaatcgtacgccaacaattgtcatcgtct 547
Query: 226 ggtc 229
||||
Sbjct: 546 ggtc 543
>gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 385
Score = 79.8 bits (40), Expect = 1e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || ||||| || ||||| |||| ||| ||||||| |||| |||| |||
Sbjct: 165 agtcatggggtccactctttggcaagctgttctatgctatttgggtcattgcccatttgt 224
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtcatcgtct 225
|||| |||||||| |||||| | || | ||||| | ||||||||||||||||||||||
Sbjct: 225 atcctttcctcaagggtttgttgggtcgacaaaatcgtacaccgacaattgtcatcgtct 284
Query: 226 ggtc 229
||||
Sbjct: 285 ggtc 288
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 445 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 504
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 505 atgggaaggcaaaacaggactcctacaattgt 536
>gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_D10 5', mRNA sequence
Length = 796
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 585 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 644
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 645 atgggaaggcaaaacaggactcctacaattgt 676
>gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 673
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 258 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 317
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 318 atgggaaggcaaaacaggactcctacaattgt 349
>gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_G07
3', mRNA sequence
Length = 764
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 432 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 373
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 372 atgggaaggcaaaacaggactcctacaattgt 341
>gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_K19
3', mRNA sequence
Length = 883
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 432 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 373
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 372 atgggaaggcaaaacaggactcctacaattgt 341
>gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_A20
3', mRNA sequence
Length = 807
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 434 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 375
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 374 atgggaaggcaaaacaggactcctacaattgt 343
>gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_J02
3', mRNA sequence
Length = 806
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 432 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 373
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 372 atgggaaggcaaaacaggactcctacaattgt 341
>gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_M03
3', mRNA sequence
Length = 823
Score = 79.8 bits (40), Expect = 1e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 420 gggaagctatttttcgctttctgggtcattgtccatctctatcccttcctcaaaggtctg 361
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 360 atgggaaggcaaaacaggactcctacaattgt 329
>gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_D13
3', mRNA sequence
Length = 817
Score = 79.8 bits (40), Expect = 1e-013
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || |||||||| ||||| |||||||| ||||||| |||| |||| |||
Sbjct: 665 agtcatggggtccgctcttcggcaagctgttctttgctatttgggtcattgcccatttgt 606
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtcatcgtct 225
|||| |||||||| |||||| | || | || || | ||||| ||||||||||||||||
Sbjct: 605 atcctttcctcaagggtttgttgggtcgacataatcgtacaccaacaattgtcatcgtct 546
Query: 226 ggtc 229
||||
Sbjct: 545 ggtc 542
>gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_K14 3', mRNA sequence
Length = 799
Score = 79.8 bits (40), Expect = 1e-013
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || ||||| || ||||| |||||||| ||||||| |||| |||| |||
Sbjct: 666 agtcatggggtccgctctttggcaagctgttctttgctatttgggtcattgcccatttgt 607
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtcatcgtct 225
|||| |||||||| |||||| | || | ||||| | ||||| ||||||||||||||||
Sbjct: 606 atcctttcctcaagggtttgttgggtcgacaaaatcgtacaccaacaattgtcatcgtct 547
Query: 226 ggtc 229
||||
Sbjct: 546 ggtc 543
>gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_F16 3', mRNA sequence
Length = 861
Score = 79.8 bits (40), Expect = 1e-013
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||||||||| || ||||| || ||||| |||||||| ||||||| |||| |||| |||
Sbjct: 666 agtcatggggtccgctctttggcaagctgttctttgctatttgggtcattgcccatttgt 607
Query: 166 atcccttcctcaaaggtttggttgggaggcaaaacaggacaccgacaattgtcatcgtct 225
|||| |||||||| |||||| | || | ||||| | ||||| ||||||||||||||||
Sbjct: 606 atcctttcctcaagggtttgttgggtcgacaaaatcgtacaccaacaattgtcatcgtct 547
Query: 226 ggtc 229
||||
Sbjct: 546 ggtc 543
>gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 340
Score = 77.8 bits (39), Expect = 5e-013
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 135 ttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttgggagg 194
|||||||| || ||||||||||||||||| || || |||||||||||| | | ||||||
Sbjct: 1 ttctttgccttctgggtgattgtccatctctacccattcctcaaaggtctaatggggagg 60
Query: 195 caaaacaggacaccgacaattgt 217
|||||||||||||| || |||||
Sbjct: 61 caaaacaggacacccactattgt 83
>gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P58 5', mRNA sequence
Length = 364
Score = 77.8 bits (39), Expect = 5e-013
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 129 aagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggtt 188
|||||||||||||| || |||||||||||||||| || || |||||||||||| | |
Sbjct: 69 aagctcttctttgccttctgggtgattgtccatcactacccattcctcaaaggtctaatg 128
Query: 189 gggaggcaaaacaggacac 207
|||||||||||||||||||
Sbjct: 129 gggaggcaaaacaggacac 147
>gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G101P46 3', mRNA sequence
Length = 831
Score = 75.8 bits (38), Expect = 2e-012
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| ||| |||| || || | ||||||| |||||||||| || ||||| || |||
Sbjct: 748 gctggtgtgtcctatgccataaacagtggataccagtcatggggtcctctctt-ggcaag 690
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttggttggg 191
|||||||| || ||||||| |||| |||| ||||||| |||||||| |||||| | ||
Sbjct: 689 ctcttctt-gctatttgggtcattgcccatttgtatcctttcctcaagggtttgctgggt 631
Query: 192 aggcaaaacaggacaccgacaattgtcatcgtctggtc 229
||||||| | || || ||||||||||||||||||||
Sbjct: 630 cggcaaaatcgtacgccaacaattgtcatcgtctggtc 593
>gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 525
Score = 73.8 bits (37), Expect = 8e-012
Identities = 109/133 (81%)
Strand = Plus / Plus
Query: 85 atgcaatcaataatggatacgagtcatggggccccctcttcgggaagctcttctttgcat 144
||||||| || || ||||| | ||||||||| || | || |||||||| || || || |
Sbjct: 66 atgcaataaacaacggatatgggtcatggggtcctttatttgggaagctatttttcgctt 125
Query: 145 tttgggtgattgtccatctgtatcccttcctcaaaggtttggttgggaggcaaaacagga 204
| ||||| ||||||||||| ||||| |||||||||||| || | || |||||||||||||
Sbjct: 126 tctgggtcattgtccatctctatcctttcctcaaaggtctgatgggaaggcaaaacagga 185
Query: 205 caccgacaattgt 217
| || ||||||||
Sbjct: 186 ctcctacaattgt 198
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 73.8 bits (37), Expect = 8e-012
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 72 gctggtgtttccaatgcaatcaataatggatacgagtcatggggccccctcttcgggaag 131
|||||||| || ||||| || |||||||| || ||||||||||| || || || || |||
Sbjct: 3065 gctggtgtctcgaatgctataaataatgggtatgagtcatgggggcctctgtttggtaag 3124
Query: 132 ctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggttt 184
|| ||||||||||| |||||||| || || || ||||| ||||| ||||||||
Sbjct: 3125 cttttctttgcattctgggtgatagttcacctttatcctttcctgaaaggttt 3177
>gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 416
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 240 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 299
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 300 atgggaaggcaaaacaggactcctacaattgt 331
>gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 440
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 28 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 87
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 88 atgggaaggcaaaacaggactcctacaattgt 119
>gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 550
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 144 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 203
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 204 atgggaaggcaaaacaggactcctacaattgt 235
>gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 620
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 60 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 119
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 120 atgggaaggcaaaacaggactcctacaattgt 151
>gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 403 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 462
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 463 atgggaaggcaaaacaggactcctacaattgt 494
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 71.9 bits (36), Expect = 3e-011
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 106 agtcatggggccccctcttcgggaagctcttctttgcattttgggtgattgtccatctgt 165
|||| |||||||| ||||| || ||||| |||||||| || |||||||| |||||||| |
Sbjct: 369 agtcgtggggcccactctttggcaagcttttctttgccttctgggtgatcgtccatctct 428
Query: 166 atcccttcctcaaaggtttg 185
| || |||||||||||||||
Sbjct: 429 accctttcctcaaaggtttg 448
>gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 744
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 336 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 395
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 396 atgggaaggcaaaacaggactcctacaattgt 427
>gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A064P24 3', mRNA sequence
Length = 673
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 433 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 374
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 373 atgggaaggcaaaacaggactcctacaattgt 342
>gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G109P08 3', mRNA sequence
Length = 783
Score = 71.9 bits (36), Expect = 3e-011
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 126 gggaagctcttctttgcattttgggtgattgtccatctgtatcccttcctcaaaggtttg 185
|||||||| || || || || ||||| ||||||||||| ||||| |||||||||||| ||
Sbjct: 436 gggaagctatttttcgctttctgggtcattgtccatctctatcctttcctcaaaggtctg 377
Query: 186 gttgggaggcaaaacaggacaccgacaattgt 217
| || |||||||||||||| || ||||||||
Sbjct: 376 atgggaaggcaaaacaggactcctacaattgt 345
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 75,445
Number of Sequences: 369679
Number of extensions: 75445
Number of successful extensions: 20578
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 86
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20448
Number of HSP's gapped (non-prelim): 119
length of query: 667
length of database: 203,408,664
effective HSP length: 19
effective length of query: 648
effective length of database: 196,384,763
effective search space: 127257326424
effective search space used: 127257326424
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)