BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.2
(4065 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 351 1e-094
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 206 5e-051
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 206 5e-051
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 178 1e-042
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 167 4e-039
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 163 7e-038
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 163 7e-038
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 159 1e-036
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 151 3e-034
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 151 3e-034
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 149 1e-033
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 147 4e-033
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 145 2e-032
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 143 6e-032
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 143 6e-032
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 139 1e-030
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 137 4e-030
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 135 1e-029
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 129 9e-028
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 129 9e-028
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 129 9e-028
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 127 4e-027
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 121 2e-025
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 119 9e-025
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 117 3e-024
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 115 1e-023
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 115 1e-023
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 115 1e-023
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 113 5e-023
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 107 3e-021
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 107 3e-021
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 107 3e-021
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 103 5e-020
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 103 5e-020
gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA librar... 101 2e-019
gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA librar... 101 2e-019
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 100 8e-019
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 98 3e-018
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 96 1e-017
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 94 5e-017
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 94 5e-017
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 92 2e-016
gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Po... 92 2e-016
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 92 2e-016
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 92 2e-016
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 92 2e-016
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 92 2e-016
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 92 2e-016
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 92 2e-016
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 92 2e-016
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 92 2e-016
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 92 2e-016
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 92 2e-016
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 92 2e-016
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 92 2e-016
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 90 8e-016
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 90 8e-016
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 88 3e-015
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 88 3e-015
gb|CK102126.1|CK102126 G065P23.5pR Populus tension wood cDN... 88 3e-015
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 88 3e-015
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 88 3e-015
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 88 3e-015
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 86 1e-014
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 86 1e-014
gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid librar... 84 5e-014
gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Po... 84 5e-014
gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA librar... 84 5e-014
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 84 5e-014
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 84 5e-014
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 84 5e-014
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 84 5e-014
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 84 5e-014
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 84 5e-014
gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus ... 84 5e-014
gb|CV234604.1|CV234604 WS01215.B21.1_I11 PT-GT-FL-A-3 Popul... 84 5e-014
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 84 5e-014
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 84 5e-014
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 82 2e-013
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 82 2e-013
gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid librar... 80 8e-013
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 80 8e-013
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 80 8e-013
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 80 8e-013
gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium ... 80 8e-013
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 80 8e-013
gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus t... 80 8e-013
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 80 8e-013
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 80 8e-013
gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA librar... 78 3e-012
gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA librar... 78 3e-012
gb|CK098592.1|CK098592 A020P56.5pR Hybrid aspen plasmid lib... 78 3e-012
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 78 3e-012
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 78 3e-012
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 78 3e-012
gb|DT526486.1|DT526486 WS02048.C21_C18 PTxN-IB-N-A-11 Popul... 78 3e-012
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 78 3e-012
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 76 1e-011
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 76 1e-011
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 76 1e-011
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 76 1e-011
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 76 1e-011
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 76 1e-011
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 76 1e-011
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 76 1e-011
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 76 1e-011
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 76 1e-011
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 76 1e-011
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 76 1e-011
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 74 5e-011
gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA libra... 74 5e-011
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 74 5e-011
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 74 5e-011
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 72 2e-010
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 72 2e-010
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 72 2e-010
gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichoca... 72 2e-010
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 72 2e-010
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 72 2e-010
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 72 2e-010
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 72 2e-010
gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library ... 70 7e-010
gb|BP923622.1|BP923622 BP923622 full-length enriched poplar... 70 7e-010
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 68 3e-009
gb|BU895092.1|BU895092 X019B09 Populus wood cDNA library Po... 68 3e-009
gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Po... 68 3e-009
gb|BP931353.1|BP931353 BP931353 full-length enriched poplar... 68 3e-009
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 68 3e-009
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 66 1e-008
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 66 1e-008
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 66 1e-008
gb|BI129778.1|BI129778 G095P49Y Populus cambium cDNA librar... 64 5e-008
gb|BU830997.1|BU830997 T015G10 Populus apical shoot cDNA li... 64 5e-008
gb|BU897151.1|BU897151 X052C02 Populus wood cDNA library Po... 64 5e-008
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 64 5e-008
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 64 5e-008
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 64 5e-008
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 64 5e-008
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 64 5e-008
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 64 5e-008
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 62 2e-007
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 62 2e-007
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 62 2e-007
gb|BI128968.1|BI128968 G084P20Y Populus cambium cDNA librar... 60 7e-007
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 60 7e-007
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 60 7e-007
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 60 7e-007
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 60 7e-007
gb|AI162632.1|AI162632 A020P56U Hybrid aspen plasmid librar... 58 3e-006
gb|CF216196.1|CF216196 PT1004 Hybrid aspen xylem up-regulat... 58 3e-006
gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA li... 58 3e-006
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 58 3e-006
gb|BI132326.1|BI132326 G135P19Y Populus cambium cDNA librar... 56 1e-005
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 56 1e-005
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 56 1e-005
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 56 1e-005
gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal libra... 56 1e-005
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 56 1e-005
gb|DN485869.1|DN485869 N041C05.3pR Populus bark cDNA librar... 56 1e-005
gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library... 54 4e-005
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 52 2e-004
gb|CF232376.1|CF232376 PtaJXO0009G11G1113 Poplar cDNA libra... 52 2e-004
gb|CK117417.1|CK117417 B050P68 Hybrid aspen plasmid library... 52 2e-004
gb|DT469819.1|DT469819 WS01918.C21_P21 PT-DX-N-A-10 Populus... 50 7e-004
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 48 0.003
gb|AI163409.1|AI163409 A041P33U Hybrid aspen plasmid librar... 46 0.011
gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA li... 46 0.011
gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Po... 46 0.011
gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA librar... 46 0.011
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 46 0.011
gb|DT469902.1|DT469902 WS01919.C21_E06 PT-DX-N-A-10 Populus... 46 0.011
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 46 0.011
gb|AI162850.1|AI162850 A025P50U Hybrid aspen plasmid librar... 44 0.042
gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library ... 44 0.042
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 44 0.042
gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal libra... 44 0.042
gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Popul... 44 0.042
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 42 0.17
gb|AC149297.1| Populus trichocarpa clone Pop1-015H07, compl... 42 0.17
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 351 bits (177), Expect = 1e-094
Identities = 522/637 (81%)
Strand = Plus / Minus
Query: 1937 agcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttgggggcat 1996
|||||||||| ||| |||||||||| ||||| | |||||| ||||||||||| || ||||
Sbjct: 2066 agcaccacttaggcaagcagttgcatgtcctcgttggtggtttctttgtttttggagcat 2007
Query: 1997 cataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccct 2056
|||||||||| | || | |||||| || ||||||||||| || ||||| || || || |
Sbjct: 2006 cataaccataaagcgcgtaccttctgaaaacacatccagtcccgacatatataggtcctt 1947
Query: 2057 gaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatatc 2116
|||| ||||| |||||| |||| ||||||||||| || ||| ||||||||| |||||||
Sbjct: 1946 gaatgccatctaaacctctcatattgatatcaaagaatacagtattccggttggcatatc 1887
Query: 2117 ggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttctttc 2176
| ||| | ||||| |||||||| || || |||||||| |||||||| || |||| |
Sbjct: 1886 gatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctcttcc 1827
Query: 2177 ctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgt 2236
| || || || |||||||| |||||||||||||| | | |||||| ||||| |||||||
Sbjct: 1826 caagcaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatgt 1767
Query: 2237 agtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagactcgga 2296
|||||||||||||||| || || | |||||||||||||||||| || |||||||||| ||
Sbjct: 1766 agtgatcacaatccaaattcaaaagatatggagcatttgttagcacggcagagactctga 1707
Query: 2297 ccaatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctctctag 2356
|||| ||||||||||| ||||| || || || || ||| | || |||| || ||||| |
Sbjct: 1706 ccaaagcattcatagctccagcctttttgtggtgattaaatccaggtctcttttctctgg 1647
Query: 2357 aaacataaaccaatcgtggcagttcatttccctcacagtcaaggcctccgctttggccaa 2416
||||||| |||| ||||| | ||| ||||| ||| |||| | ||||| ||||||||||
Sbjct: 1646 aaacatataccagacgtggtaattcgtttccatcagtgtcatgccctccactttggccaa 1587
Query: 2417 ggaagacctgaatcattccaggatgatcacgaacattgtttccaggccagggggttccat 2476
|||| ||||||||||||||||| |||||||| ||||| || |||||||| || || ||||
Sbjct: 1586 ggaaaacctgaatcattccagggtgatcacggacattattcccaggccatggagtaccat 1527
Query: 2477 cttgcattgtccatccttcttcaggaactttctgggctttggcaactaaggcattgattc 2536
| |||||||||||||| ||||| || || || || || |||||||| || |||||||| |
Sbjct: 1526 cctgcattgtccatccatcttctgggaccttatgagccttggcaaccaaagcattgatcc 1467
Query: 2537 tcaccttgaattcctcatactctctcttcattgctct 2573
| || || || |||||||||||||||||||||||
Sbjct: 1466 gaattttaaactcttcatactctctcttcattgctct 1430
Score = 272 bits (137), Expect = 1e-070
Identities = 431/529 (81%)
Strand = Plus / Minus
Query: 2674 cagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgttagc 2733
||||| || ||||||||||||||||||||||||||||| || ||||| ||||| || |||
Sbjct: 1329 cagaatgggacccatttctttgcaaattcagatgtttctgacaatgcctcaaatgtcagc 1270
Query: 2734 attgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccaccgaa 2793
|| ||||||||||||||||||||||| || |||||||| |||||||| ||||| || | |
Sbjct: 1269 atagcagcaccatcatcagaaacataacatgaaaccttgtcaacagggtaatcaactgca 1210
Query: 2794 aggatagatagaacagtatttgttgtgaccaaaggaggttcctttaagggatcaaccgta 2853
|| || || ||||| || |||| || |||| ||| || || || || |||||||| |||
Sbjct: 1209 agaatggacagaaccgtgtttgcggtcaccagagggggctctttcaatggatcaacggta 1150
Query: 2854 ctgacaaagaaatcaattggagcaagttgagatggctggccttccttgtcgaacctcagt 2913
|| ||| | | |||| |||| ||| ||||| |||||||||||| || |||||||
Sbjct: 1149 ctaacatatatgtcaactggacaaagctgagaaacctggccttccttttcatacctcaga 1090
Query: 2914 gacagccggtctaggtaagtctctctctcaatagggaaccactttgggaattgatcaaga 2973
|||| | || || ||||| || || |||||||||| ||||||||||||||||||||||
Sbjct: 1089 gacaatctatcgagataagtttccctgtcaatagggagccactttgggaattgatcaaga 1030
Query: 2974 atccaagacatggcaaaccagatttcacagataacagatatgagccacaaagcaaatgca 3033
||||| || | ||||||||| || |||||||| |||||||| ||||| ||||||||||||
Sbjct: 1029 atccatgaaacggcaaaccaaatctcacagatcacagatataagccataaagcaaatgca 970
Query: 3034 tcattcaccggatgcatcactcggtagtggaagaagaaccccaaaaccacaagccgaata 3093
|||||||| ||||| | ||||| ||||||||||||||||| | ||| || || |||| |
Sbjct: 969 tcattcacaggatgtgtgactcgatagtggaagaagaacccaacaacaacgagtcgaaca 910
Query: 3094 atgataatcatcctatatggattaatctggcttgatggaagtggaattttcctggacagt 3153
||||| ||||| | || ||||| || ||||| || ||||| || ||||| | || |||
Sbjct: 909 atgatgatcattcggtaaggattgatttggctggacggaagaggcatttttcgtgatagt 850
Query: 3154 tgttgtcttgcttcatccattagtggtagatcagcatcgtcaccatcat 3202
|||| ||||| |||||||||| ||| ||||| | ||| ||||||||||
Sbjct: 849 ggttgccttgcctcatccattaatgggagatcgggatcatcaccatcat 801
Score = 121 bits (61), Expect = 2e-025
Identities = 217/269 (80%)
Strand = Plus / Minus
Query: 997 agctctgagaactcctcatcatctccaccctttgatgtcacggtgaagcttgtatcaaca 1056
|||||||||||||| || || ||||| || || || || || |||||| | |||||||||
Sbjct: 2991 agctctgagaactcgtcgtcgtctcctcctttagacgtaacagtgaagttcgtatcaaca 2932
Query: 1057 ccagctatgaccttgagaagtccctggaacacagcaaagaggtgtgaggacacacctcca 1116
||||||| ||||| | ||| ||||||||||| ||||| || |||| || || |||||
Sbjct: 2931 ccagctagaacctttaaaagcccctggaacactgcaaatagatgtgctgatacccctccg 2872
Query: 1117 atgacccagaactgctcattcctccaccagtcatcaattccaacaccactccatctcatt 1176
|| |||||||| || || || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 2871 atcacccagaattgttcgtttctccaccactcgtcaataccaaccccactccatctcatt 2812
Query: 1177 tctaggatgctcgtagcaaaaatgcagataaaaagtgacatgaaccacaggctggcaaca 1236
|| || || || || || ||||| || || ||||| |||| ||||||||||||||| ||
Sbjct: 2811 tccagtatacttgttgcgaaaatacaaatgaaaagagacaaaaaccacaggctggcagca 2752
Query: 1237 ttattcagctctggagtgataaatttccc 1265
|| | ||||| |||||||| || |||||
Sbjct: 2751 ttgctgagctccggagtgatgaacttccc 2723
Score = 89.7 bits (45), Expect = 8e-016
Identities = 294/377 (77%)
Strand = Plus / Minus
Query: 1378 ccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaagagcc 1437
||||| |||||||||||||| || || ||| || || ||||||| || |||||||||
Sbjct: 2610 ccatatccataccaaagaggacagtgccggctcaaaaatatctcaactgatccaagagcc 2551
Query: 1438 caccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaatgca 1497
|| | ||| |||||||| |||||||| |||||||| | || || |||||||| |||||
Sbjct: 2550 catctaaggacctggtgtagacgatcagaaagattaatgggcgccgaacctttaaatgct 2491
Query: 1498 acccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaaccagtt 1557
|| ||| || ||||| ||||| | ||| |||||||| ||||| || || || ||
Sbjct: 2490 ggcctagaaggaatacagtatattgatctccatccatgacagtgcattttaaagcctgtc 2431
Query: 1558 agaatatcttctgtaactgatccatagatccagccaatctcttttccccagtctgtcttg 1617
| ||||| |||||||| || ||||| ||||| || | |||||| ||||| ||||| ||
Sbjct: 2430 aatatatcctctgtaacagaaccataaatccaccctacctctttgccccattctgtttta 2371
Query: 1618 tcttcataaccacaactaatgacatgtatagcttctttcaaaagagaagcaggacttgca 1677
|||||||| ||||| ||||||||||| || |||||||| | ||||| ||||| || |||
Sbjct: 2370 tcttcatagccacagctaatgacatggatggcttctttaagcagagacgcagggctggca 2311
Query: 1678 ctcttcaaggttccaccattctcgagaagtgtggatgtaaccaaaacagaagattggcca 1737
|| |||| | ||||||| ||| || || || || | || || ||||||||||| |||
Sbjct: 2310 cttttcagcgagccaccatcctctagcagggtagacgctacaaacacagaagattgtcca 2251
Query: 1738 aatttcttttctaattt 1754
|| |||||||| |||||
Sbjct: 2250 aacttcttttccaattt 2234
Score = 73.8 bits (37), Expect = 5e-011
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 811 aaacctttgagaaagggataaagatggacaatcacccaaaatgcaaagaatagcttccca 870
|||||||| || || |||||||| || || |||||||| ||||||||||| ||||| |||
Sbjct: 3177 aaacctttcaggaaaggataaaggtgaactatcacccagaatgcaaagaaaagcttacca 3118
Query: 871 aagagggggccccatgactcatatccgttattgatcgcatt 911
|| || || |||||||||||||| || ||||| || |||||
Sbjct: 3117 aacagaggcccccatgactcatacccattatttatagcatt 3077
Score = 54.0 bits (27), Expect = 4e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 3247 tgcttccaattctccatccgttccttccaagcaacactaccatacccatatgcagcaaga 3306
|||||||| ||||||||| |||||||| |||| ||| ||||| ||||| ||||| |
Sbjct: 756 tgcttccagctctccatcctctccttccatgcaatacttccatatccataagcagccaag 697
Query: 3307 tccttggatgggtccatagacctgggttgcacagg 3341
|||||||| || ||||| || || |||||||||||
Sbjct: 696 tccttggaaggatccatggatcttggttgcacagg 662
Score = 46.1 bits (23), Expect = 0.011
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3732 ggggaaggcgcactcgttgcacgccac 3758
||||||||||||||||||||| |||||
Sbjct: 256 ggggaaggcgcactcgttgcaggccac 230
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 206 bits (104), Expect = 5e-051
Identities = 263/316 (83%)
Strand = Plus / Minus
Query: 1937 agcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttgggggcat 1996
|||||||||| ||| |||||||||| ||||| | |||||| ||||||||||| || ||||
Sbjct: 321 agcaccacttaggcaagcagttgcatgtcctcgttggtggtttctttgtttttggagcat 262
Query: 1997 cataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccct 2056
|||||||||| | || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 261 cataaccataaagcgcgtgccttctgaaaacacatccagtcccgacatatataggtcctt 202
Query: 2057 gaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatatc 2116
|||| |||||||||||| |||| ||||||||||| || ||| |||||||| |||||||
Sbjct: 201 gaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggcatatc 142
Query: 2117 ggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttctttc 2176
| ||| | ||||| |||||||| || || |||||||| |||||||| || ||||||
Sbjct: 141 gatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctctttc 82
Query: 2177 ctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgt 2236
| ||||| || |||||||| |||||||||||||| | | |||||| ||||| |||||||
Sbjct: 81 caagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatgt 22
Query: 2237 agtgatcacaatccaa 2252
||||||||||||||||
Sbjct: 21 agtgatcacaatccaa 6
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 206 bits (104), Expect = 5e-051
Identities = 263/316 (83%)
Strand = Plus / Minus
Query: 1937 agcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttgggggcat 1996
|||||||||| ||| |||||||||| ||||| | |||||| ||||||||||| || ||||
Sbjct: 321 agcaccacttaggcaagcagttgcatgtcctcgttggtggtttctttgtttttggagcat 262
Query: 1997 cataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccct 2056
|||||||||| | || |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 261 cataaccataaagcgcgtgccttctgaaaacacatccagtcccgacatatataggtcctt 202
Query: 2057 gaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatatc 2116
|||| |||||||||||| |||| ||||||||||| || ||| |||||||| |||||||
Sbjct: 201 gaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggcatatc 142
Query: 2117 ggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttctttc 2176
| ||| | ||||| |||||||| || || |||||||| |||||||| || ||||||
Sbjct: 141 gatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctctttc 82
Query: 2177 ctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgt 2236
| ||||| || |||||||| |||||||||||||| | | |||||| ||||| |||||||
Sbjct: 81 caagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatgt 22
Query: 2237 agtgatcacaatccaa 2252
||||||||||||||||
Sbjct: 21 agtgatcacaatccaa 6
>gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_A14 5', mRNA sequence
Length = 783
Score = 178 bits (90), Expect = 1e-042
Identities = 267/326 (81%)
Strand = Plus / Minus
Query: 2026 acacatccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgata 2085
|||||||||||||||||||| | ||| || |||| ||||| | |||||||||||| |||
Sbjct: 602 acacatccagtaccaacatatactggcccttgaaccccatctagacctttcatgtttata 543
Query: 2086 tcaaaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctt 2145
||||| || |||||||| || |||||||||| |||||||||||||| |||||||| ||
Sbjct: 542 tcaaagaacacaacattgcgattagcatatctatcatggcgatcaataccatcaaacctc 483
Query: 2146 tgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacatt 2205
|| || ||||| |||||||| | |||||| || ||| || ||||||| ||| |||||
Sbjct: 482 tgcggaaactggacatagcagagcttcttcccaagttggggatccatcaaaaagcacatg 423
Query: 2206 gcttcctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatat 2265
||||| ||| |||||||||||| |||||||| || ||||||||||| || |||| | |
Sbjct: 422 gcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattcaacataaaa 363
Query: 2266 ggagcatttgttagtacagcagagactcggaccaatgcattcatagcaccagctttctta 2325
|| ||||| || || || || |||||||| | || |||||||| ||||| ||||||||
Sbjct: 362 ggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacctgctttcttg 303
Query: 2326 tgatggttatagcctggtcgtttctc 2351
|| |||||||| || |||||||||||
Sbjct: 302 tggtggttatatccaggtcgtttctc 277
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 167 bits (84), Expect = 4e-039
Identities = 264/324 (81%)
Strand = Plus / Minus
Query: 1308 gggaatagatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaattt 1367
|||||| ||||||||||||||||| | ||||| ||||||||||||| |||||| | ||
Sbjct: 2810 gggaatggatgtccaaggatacacaactgagtttatgtaggaaaatcgttccaaccactt 2751
Query: 1368 cagaccgccaccatacccataccaaagagggcaatgattgctgaagaagatctcaataga 1427
|| || || ||||| |||||||||| || || || | |||||||| ||||||| |||
Sbjct: 2750 caatccacccccataaccataccaaattggacagtgtctactgaagaaaatctcaacaga 2691
Query: 1428 cccaagagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacc 1487
|| || ||||||||||| |||||||| ||||||||||| || || | || || || ||
Sbjct: 2690 accgagggcccaccgaagaacctggtgtagacgatctgacaggttaattggagctgaccc 2631
Query: 1488 tttgaatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatctt 1547
||||||||| ||| |||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 2630 cttgaatgcaggccgcttaggtatgcagtaaacagaccgccatccatggcagtgcatctt 2571
Query: 1548 gaaaccagttagaatatcttctgtaactgatccatagatccagccaatctcttttcccca 1607
||| || || | ||||| |||||||| || ||||| |||||||||| || ||||||||
Sbjct: 2570 gaatcctgtcaagatatcctctgtaacagagccatatatccagccaacttcctttcccca 2511
Query: 1608 gtctgtcttgtcttcataaccaca 1631
||||| || ||||||||||||||
Sbjct: 2510 ttctgttttatcttcataaccaca 2487
Score = 133 bits (67), Expect = 6e-029
Identities = 157/187 (83%)
Strand = Plus / Minus
Query: 2402 ctccgctttggccaaggaagacctgaatcattccaggatgatcacgaacattgtttccag 2461
|||| ||||| |||||||| ||||||||||| |||||||| || || |||||||||||||
Sbjct: 1740 ctccactttgaccaaggaaaacctgaatcatgccaggatggtctcgtacattgtttccag 1681
Query: 2462 gccagggggttccatcttgcattgtccatccttcttcaggaactttctgggctttggcaa 2521
|||| || |||||||||||||||||||| || ||||| ||||| || || ||| ||| ||
Sbjct: 1680 gccatggagttccatcttgcattgtccaaccatcttccggaaccttttgtgctgtggaaa 1621
Query: 2522 ctaaggcattgattctcaccttgaattcctcatactctctcttcattgctctcctctccc 2581
| || |||| || ||||| |||||||| ||||| ||||||||||| || | ||| ||||
Sbjct: 1620 ccaacccatttatcctcactttgaattcttcatattctctcttcatggcacgcctttccc 1561
Query: 2582 taacaaa 2588
| |||||
Sbjct: 1560 tgacaaa 1554
Score = 109 bits (55), Expect = 9e-022
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 979 gtccatttgaatgtatatagctctgagaactcctcatcatctccaccctttgatgtcacg 1038
||||| |||||| | || ||||||||||| || |||||||| | || |||||||| ||
Sbjct: 3139 gtccacttgaatatgtaaagctctgagaattctccatcatctgctccttttgatgtaaca 3080
Query: 1039 gtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagcaaagagg 1098
|||||| ||||| ||||||||| | |||||||| | |||||||| | |||||| |||
Sbjct: 3079 gtgaagtttgtactaacaccagccaaaaccttgagcaaaccctggaagagagcaaacagg 3020
Query: 1099 tgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatcaattcca 1158
||||| || ||||||||||| ||||| || || ||||| |||||||||||||| |||||
Sbjct: 3019 tgtgatgaaacacctccaatcacccaaaattgttcatttctccaccagtcatctattccg 2960
Query: 1159 acaccac 1165
|||||||
Sbjct: 2959 acaccac 2953
Score = 87.7 bits (44), Expect = 3e-015
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 1993 gcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattgga 2052
|||||||||||||| | ||| ||||| | ||| ||||| ||||| |||||||| |||||
Sbjct: 2149 gcatcataaccataaagtgcttgcctccgaaaaacacacccagttccaacatatattggt 2090
Query: 2053 ccctgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagca 2112
|| || | |||||| || |||||||| || |||||||| || ||||| || || || |
Sbjct: 2089 ccttgtaaaccatctaatcctttcatatttatatcaaagaatacaacgtttcgattcgag 2030
Query: 2113 tatcggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaac 2168
|||| ||||| |||||||| |||||||||| |||||| ||||| ||||| |||||
Sbjct: 2029 tatctatcatgacgatcaatgccatcaaatcgttgaggaaactgcacataacaaac 1974
Score = 63.9 bits (32), Expect = 5e-008
Identities = 113/140 (80%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||| || |||||||| ||| | ||||||||||| || || || | |||||||| ||
Sbjct: 1471 ttgcaaaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaatgta 1412
Query: 2731 agcattgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccacc 2790
||||| || |||||||| || || |||||||| | ||| ||||| ||||||||||| |||
Sbjct: 1411 agcatggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatcaacc 1352
Query: 2791 gaaaggatagatagaacagt 2810
| || ||||| ||||||||
Sbjct: 1351 gcgagaatagagagaacagt 1332
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 163 bits (82), Expect = 7e-038
Identities = 265/326 (81%)
Strand = Plus / Minus
Query: 2026 acacatccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgata 2085
|||||||||||||||||||| | ||| || |||| ||||| | |||||||||||| |||
Sbjct: 1783 acacatccagtaccaacatatactggcccttgaaccccatctagacctttcatgtttata 1724
Query: 2086 tcaaaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctt 2145
||||| || ||||| || || |||||||||| ||||||||||| || |||||||| ||
Sbjct: 1723 tcaaagaacacaacgttgcgattagcatatctatcatggcgatcgataccatcaaacctc 1664
Query: 2146 tgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacatt 2205
|| || ||||| |||||||| | |||||| || ||| || ||||||| ||| |||||
Sbjct: 1663 tgcggaaactggacatagcagagcttcttcccaagttggggatccatcaaaaagcacatg 1604
Query: 2206 gcttcctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatat 2265
||||| ||| |||||||||||| |||||||| || ||||||||||| || |||| | |
Sbjct: 1603 gcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattcaacataaaa 1544
Query: 2266 ggagcatttgttagtacagcagagactcggaccaatgcattcatagcaccagctttctta 2325
|| ||||| || || || || |||||||| | || |||||||| ||||| ||||||||
Sbjct: 1543 ggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacctgctttcttg 1484
Query: 2326 tgatggttatagcctggtcgtttctc 2351
|| |||||||| || |||||||||||
Sbjct: 1483 tggtggttatatccaggtcgtttctc 1458
Score = 83.8 bits (42), Expect = 5e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| || ||||| ||||||||||| |||||
Sbjct: 3040 gtcctgttttgccttcccatcagacctttgaggaaaggatagagatggacaatgacccag 2981
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 2980 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 2931
Score = 75.8 bits (38), Expect = 1e-011
Identities = 164/206 (79%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacgaacattgtttccaggccagggggttccatcttgc 2481
|||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||
Sbjct: 1387 acctgaatcattccaggatgatcacgggtgatgtttccaggccatggggtaccatcctgc 1328
Query: 2482 attgtccatccttcttcaggaactttctgggctttggcaactaaggcattgattctcacc 2541
|| |||||||||||| || || ||||| || | || || || ||||| || ||
Sbjct: 1327 atcacccatccttcttctggtttcttttgggcctttgacaccaatgcgttgatccttact 1268
Query: 2542 ttgaattcctcatactctctcttcattgctctcctctccctaacaaagtttgctgccacc 2601
|||||||| ||||| ||||| ||||| ||||| | |||| | |||||||| | |||
Sbjct: 1267 ttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcact 1208
Query: 2602 ttgtctttcaagtagtctatcttctg 2627
||||||||||||||||| ||||||||
Sbjct: 1207 ttgtctttcaagtagtcaatcttctg 1182
Score = 73.8 bits (37), Expect = 5e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 1536 acaatgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaat 1595
||||||||||||||| || || || |||||||||||||| || ||||| ||||| ||||
Sbjct: 2294 acaatgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaac 2235
Query: 1596 ctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttc 1652
|||||| ||||| || || || |||||||| || ||||| || ||||| || |||||
Sbjct: 2234 ctctttaccccattccgttttttcttcatacccgcaacttataacatgaatggcttc 2178
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 163 bits (82), Expect = 7e-038
Identities = 265/326 (81%)
Strand = Plus / Minus
Query: 2026 acacatccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgata 2085
|||||||||||||||||||| | ||| || |||| ||||| | |||||||||||| |||
Sbjct: 1855 acacatccagtaccaacatatactggcccttgaaccccatctagacctttcatgtttata 1796
Query: 2086 tcaaaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctt 2145
||||| || ||||| || || |||||||||| ||||||||||| || |||||||| ||
Sbjct: 1795 tcaaagaacacaacgttgcgattagcatatctatcatggcgatcgataccatcaaacctc 1736
Query: 2146 tgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacatt 2205
|| || ||||| |||||||| | |||||| || ||| || ||||||| ||| |||||
Sbjct: 1735 tgcggaaactggacatagcagagcttcttcccaagttggggatccatcaaaaagcacatg 1676
Query: 2206 gcttcctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatat 2265
||||| ||| |||||||||||| |||||||| || ||||||||||| || |||| | |
Sbjct: 1675 gcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattcaacataaaa 1616
Query: 2266 ggagcatttgttagtacagcagagactcggaccaatgcattcatagcaccagctttctta 2325
|| ||||| || || || || |||||||| | || |||||||| ||||| ||||||||
Sbjct: 1615 ggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacctgctttcttg 1556
Query: 2326 tgatggttatagcctggtcgtttctc 2351
|| |||||||| || |||||||||||
Sbjct: 1555 tggtggttatatccaggtcgtttctc 1530
Score = 83.8 bits (42), Expect = 5e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| || ||||| ||||||||||| |||||
Sbjct: 3112 gtcctgttttgccttcccatcagacctttgaggaaaggatagagatggacaatgacccag 3053
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 3052 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 3003
Score = 83.8 bits (42), Expect = 5e-014
Identities = 165/206 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacgaacattgtttccaggccagggggttccatcttgc 2481
|||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||
Sbjct: 1459 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1400
Query: 2482 attgtccatccttcttcaggaactttctgggctttggcaactaaggcattgattctcacc 2541
|| |||||||||||| || || ||||| || | || ||||| ||||| || ||
Sbjct: 1399 atcacccatccttcttctggtttcttttgggcctttgacaccaaggcgttgatccttact 1340
Query: 2542 ttgaattcctcatactctctcttcattgctctcctctccctaacaaagtttgctgccacc 2601
|||||||| ||||| ||||| ||||| ||||| | |||| | |||||||| | |||
Sbjct: 1339 ttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcact 1280
Query: 2602 ttgtctttcaagtagtctatcttctg 2627
||||||||||||||||| ||||||||
Sbjct: 1279 ttgtctttcaagtagtcaatcttctg 1254
Score = 73.8 bits (37), Expect = 5e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 1536 acaatgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaat 1595
||||||||||||||| || || || |||||||||||||| || ||||| ||||| ||||
Sbjct: 2366 acaatgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaac 2307
Query: 1596 ctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttc 1652
|||||| ||||| || || || |||||||| || ||||| || ||||| || |||||
Sbjct: 2306 ctctttaccccattcggttttttcttcatacccgcaacttataacatgaatggcttc 2250
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 159 bits (80), Expect = 1e-036
Identities = 263/324 (81%)
Strand = Plus / Minus
Query: 1308 gggaatagatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaattt 1367
|||||| ||||||||||| ||||| | ||||| ||||||||||||| |||||| | ||
Sbjct: 2844 gggaatggatgtccaagggtacacaactgagtttatgtaggaaaatcgttccaaccactt 2785
Query: 1368 cagaccgccaccatacccataccaaagagggcaatgattgctgaagaagatctcaataga 1427
|| || || ||||| |||||||||| || || || | |||||||| ||||||| |||
Sbjct: 2784 caatccacccccataaccataccaaattggacagtgtctactgaagaaaatctcaacaga 2725
Query: 1428 cccaagagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacc 1487
|| || ||||||||||| |||||||| ||||||||||| || || | || || || ||
Sbjct: 2724 accgagggcccaccgaagaacctggtgtagacgatctgacaggttaattggagctgaccc 2665
Query: 1488 tttgaatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatctt 1547
||||||||| ||| |||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 2664 cttgaatgcaggccgcttaggtatgcagtaaacagaccgccatccatggcagtgcatctt 2605
Query: 1548 gaaaccagttagaatatcttctgtaactgatccatagatccagccaatctcttttcccca 1607
||| || || | ||||| |||||||| || ||||| |||||||||| || ||||||||
Sbjct: 2604 gaatcctgtcaagatatcctctgtaacagagccatatatccagccaacttcctttcccca 2545
Query: 1608 gtctgtcttgtcttcataaccaca 1631
||||| || ||||||||||||||
Sbjct: 2544 ttctgttttatcttcataaccaca 2521
Score = 117 bits (59), Expect = 3e-024
Identities = 155/187 (82%)
Strand = Plus / Minus
Query: 2402 ctccgctttggccaaggaagacctgaatcattccaggatgatcacgaacattgtttccag 2461
|||| ||||| |||||||| ||||| ||||| |||||||| || || |||||||||||||
Sbjct: 1774 ctccactttgaccaaggaaaacctggatcatgccaggatggtctcgtacattgtttccag 1715
Query: 2462 gccagggggttccatcttgcattgtccatccttcttcaggaactttctgggctttggcaa 2521
|||| || |||||||||||||||||||| || ||||| ||||| || || ||| ||| ||
Sbjct: 1714 gccatggagttccatcttgcattgtccaaccatcttccggaaccttttgcgctgtggaaa 1655
Query: 2522 ctaaggcattgattctcaccttgaattcctcatactctctcttcattgctctcctctccc 2581
| || |||| || ||||| ||||| || ||||| ||||||||||| || | ||| ||||
Sbjct: 1654 ccaacccatttatcctcactttgaactcttcatattctctcttcatggcacgcctttccc 1595
Query: 2582 taacaaa 2588
| |||||
Sbjct: 1594 tgacaaa 1588
Score = 101 bits (51), Expect = 2e-019
Identities = 153/187 (81%)
Strand = Plus / Minus
Query: 979 gtccatttgaatgtatatagctctgagaactcctcatcatctccaccctttgatgtcacg 1038
||||| |||||| | || ||||||||||| || |||||||| | || |||||||| ||
Sbjct: 3173 gtccacttgaatatgtaaagctctgagaattctccatcatctgctccttttgatgtaaca 3114
Query: 1039 gtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagcaaagagg 1098
|||||| ||||| ||||||||| | |||||||| | |||||||| | |||||| |||
Sbjct: 3113 gtgaagtttgtactaacaccagccaaaaccttgagcaaaccctggaagagagcaaacagg 3054
Query: 1099 tgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatcaattcca 1158
||||| || ||||||||||| ||||| || || ||||| |||||||||||||| || ||
Sbjct: 3053 tgtgatgaaacacctccaatcacccaaaattgttcatttctccaccagtcatctatcccg 2994
Query: 1159 acaccac 1165
|||||||
Sbjct: 2993 acaccac 2987
Score = 87.7 bits (44), Expect = 3e-015
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 1993 gcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattgga 2052
|||||||||||||| | ||| ||||| | ||| ||||| ||||| |||||||| |||||
Sbjct: 2183 gcatcataaccataaagtgcttgcctccgaaaaacacacccagttccaacatatattggt 2124
Query: 2053 ccctgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagca 2112
|| || | |||||| || |||||||| || |||||||| || ||||| || || || |
Sbjct: 2123 ccttgtaaaccatctaatcctttcatatttatatcaaagaatacaacgtttcgattcgag 2064
Query: 2113 tatcggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaac 2168
|||| ||||| |||||||| |||||||||| |||||| ||||| ||||| |||||
Sbjct: 2063 tatctatcatgacgatcaatgccatcaaatcgttgaggaaactgcacataacaaac 2008
Score = 61.9 bits (31), Expect = 2e-007
Identities = 151/191 (79%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||| || |||||||| ||| | ||||||||||| || || || | |||||||| ||
Sbjct: 1505 ttgcaaaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaatgta 1446
Query: 2731 agcattgcagcaccatcatcagaaacatagcaagaaaccttatcaacaggataatccacc 2790
||||| || |||||||| || || |||||||| | ||| ||||| ||||||||||| |||
Sbjct: 1445 agcatggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatcaacc 1386
Query: 2791 gaaaggatagatagaacagtatttgttgtgaccaaaggaggttcctttaagggatcaacc 2850
| || ||||| || ||||| || | |||| || |||||||| || | |||||||||
Sbjct: 1385 gcgagaatagagagtacagtgttcgcagtgatcagcggaggttctttcataggatcaacc 1326
Query: 2851 gtactgacaaa 2861
||||| |||||
Sbjct: 1325 gtacttacaaa 1315
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 151 bits (76), Expect = 3e-034
Identities = 187/224 (83%)
Strand = Plus / Minus
Query: 1432 agagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttg 1491
|||||||| |||||||| |||| |||||||| |||||||| | ||| ||||| |||||
Sbjct: 659 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 600
Query: 1492 aatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaa 1551
|| || || || || || || |||||||||||||||||| | ||||||||| |||
Sbjct: 599 aaggctgggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaa 540
Query: 1552 ccagttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtct 1611
||||| ||||||||||||||||| || ||||||||||| |||||||| |||||| |||
Sbjct: 539 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 480
Query: 1612 gtcttgtcttcataaccacaactaatgacatgtatagcttcttt 1655
|| ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 479 gttttgtcctcatacccacaactaatgacatgaatagcttcttt 436
Score = 54.0 bits (27), Expect = 4e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 1996 tcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccc 2055
||||||||||| |||||| ||| |||| |||||||||||||| ||||| | || ||
Sbjct: 116 tcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagacaggtcct 57
Query: 2056 tgaataccatccaaacctttcatgttgatatcaaa 2090
||||||||||||| ||| ||| ||| ||||||||
Sbjct: 56 tgaataccatccagacccctcaagtttatatcaaa 22
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 151 bits (76), Expect = 3e-034
Identities = 214/260 (82%)
Strand = Plus / Minus
Query: 1417 atctcaatagacccaagagcccaccgaagcacctggtgaagacgatctgaaagattcaga 1476
||||||| ||| || || ||||| || ||||||||||| |||||||||||||| || |
Sbjct: 2985 atctcaacagatcccagtgcccatcggagcacctggtgtagacgatctgaaaggtttatt 2926
Query: 1477 ggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattgaccgccaaccatga 1536
|| || |||||||| |||||| ||| || |||| || | ||| ||||| |||||
Sbjct: 2925 ggagctgaacctttaaatgcaggtatttttggcgtgcaatacactgatcgccagccatgg 2866
Query: 1537 caatgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaatc 1596
|||||||||||||| ||||||| ||||| || ||||| || ||||| ||||| ||||||
Sbjct: 2865 caatgcatcttgaagccagttaatatatcctcagtaacagagccataaatccacccaatc 2806
Query: 1597 tcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttctttc 1656
||||||||||| || || || |||||||||||||||||||||||||| || |||||||||
Sbjct: 2805 tcttttccccattcagttttatcttcataaccacaactaatgacatgaatggcttctttc 2746
Query: 1657 aaaagagaagcaggacttgc 1676
||||| || |||| ||||||
Sbjct: 2745 aaaagtgatgcagaacttgc 2726
Score = 127 bits (64), Expect = 4e-027
Identities = 157/188 (83%)
Strand = Plus / Minus
Query: 1990 ggggcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaatt 2049
||||||||||| ||||| | ||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2433 ggggcatcatatccataaagtgcttgcctcctaaaaacgcatccagtaccaacatatata 2374
Query: 2050 ggaccctgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggtta 2109
||||| || || |||||||| |||||||| ||||||||||| || |||||||| || ||
Sbjct: 2373 ggaccttgtatgccatccaatcctttcatattgatatcaaagaatacaacattacgattt 2314
Query: 2110 gcatatcggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaacc 2169
| |||| ||||| ||||||||||||||||||||||| || || || ||||| ||||
Sbjct: 2313 gagtatctatcatgacgatcaatcccatcaaatctttgcggaaattgaacataacaaatt 2254
Query: 2170 ttctttcc 2177
||||||||
Sbjct: 2253 ttctttcc 2246
Score = 109 bits (55), Expect = 9e-022
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 2413 ccaaggaagacctgaatcattccaggatgatcacgaacattgtttccaggccagggggtt 2472
|||||||||||||||||||||||||||||||| | ||||| || || ||||| || ||
Sbjct: 2010 ccaaggaagacctgaatcattccaggatgatctctgacattattccctggccatggagtg 1951
Query: 2473 ccatcttgcattgtccatccttcttcaggaactttctgggctttggcaactaaggcattg 2532
||||| ||||||||||| || || |||||||| ||||| || |||||||||| ||||
Sbjct: 1950 ccatcctgcattgtccaaccatcctcaggaaccttctgtgccgtggcaactaacccattt 1891
Query: 2533 attctcaccttgaattcctcatactctctcttcat 2567
|||| || ||||| || |||||||||||||||||
Sbjct: 1890 attcgaactttgaactcttcatactctctcttcat 1856
Score = 95.6 bits (48), Expect = 1e-017
Identities = 108/128 (84%)
Strand = Plus / Minus
Query: 2635 taccactctggagcgcgaggttcaatattgtaccgtttgcagaaaggaacccatttcttt 2694
||||| |||||||| ||||||||||| || ||| ||||||||||| ||||| || ||
Sbjct: 1788 taccattctggagctcgaggttcaatgctgaacctcttgcagaaagggacccactttctt 1729
Query: 2695 gcaaattcagatgtttcagataatgcttcaaacgttagcattgcagcaccatcatcagaa 2754
|||||||||||||| ||||| | |||||||| || ||||| |||||||||||||| ||
Sbjct: 1728 gcaaattcagatgtctcagagatagcttcaaaagtaagcatggcagcaccatcatctgag 1669
Query: 2755 acatagca 2762
||||||||
Sbjct: 1668 acatagca 1661
Score = 75.8 bits (38), Expect = 1e-011
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 1066 accttgagaagtccctggaacacagcaaagaggtgtgaggacacacctccaatgacccag 1125
||||| ||||| |||||||| | |||||| || || || || |||| ||||||||||||
Sbjct: 3336 accttaagaaggccctggaaaagagcaaatagatgagatgaggcaccaccaatgacccag 3277
Query: 1126 aactgctcattcctccaccagtcatcaattccaacacc 1163
||||||||||| ||||||||||||| || ||||||||
Sbjct: 3276 aactgctcatttctccaccagtcatggatgccaacacc 3239
Score = 52.0 bits (26), Expect = 2e-004
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 829 taaagatggacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgac 888
||||| |||||||| ||||| || |||||||||||||| || ||||| || ||||| | |
Sbjct: 3573 taaaggtggacaattacccacaacgcaaagaatagcttaccgaagagcggaccccaagtc 3514
Query: 889 tcatatccgttattgatcgcat 910
|| || || |||||||| ||||
Sbjct: 3513 tcgtaaccattattgatggcat 3492
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 149 bits (75), Expect = 1e-033
Identities = 216/263 (82%)
Strand = Plus / Minus
Query: 2599 accttgtctttcaagtagtctatcttctgttggaagtaccactctggagcgcgaggttca 2658
||||||||||| |||||||| ||||| || ||||||||| |||||||| || || |||
Sbjct: 900 accttgtcttttaagtagtcaatcttttgagcgaagtaccattctggagctcgcggctca 841
Query: 2659 atattgtaccgtttgcagaaaggaacccatttctttgcaaattcagatgtttcagataat 2718
|||| || |||||||||||||||||||| | ||||||||||| ||||||||||
Sbjct: 840 atatcatatttcttgcagaaaggaacccattttctagcaaattcagacgtttcagatatg 781
Query: 2719 gcttcaaacgttagcattgcagcaccatcatcagaaacatagcaagaaaccttatcaaca 2778
|||||||| || | ||| ||||| |||||||| |||||||||||||| || || || ||
Sbjct: 780 gcttcaaatgtcaacatagcagctccatcatctgaaacatagcaagagactttgtcgact 721
Query: 2779 ggataatccaccgaaaggatagatagaacagtatttgttgtgaccaaaggaggttccttt 2838
|| ||||| || | ||| |||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 720 gggtaatctactgcaagaatagatagcacagtattggctgtgaccagtggaggttccttt 661
Query: 2839 aagggatcaaccgtactgacaaa 2861
|| || || || |||||||||||
Sbjct: 660 aaagggtcgactgtactgacaaa 638
Score = 58.0 bits (29), Expect = 3e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 2959 gggaattgatcaagaatccaagacatggcaaaccagatttcacagataacagatatgagc 3018
||||||||||| | ||||| || || |||||||| || ||||||||||||||||| | |
Sbjct: 540 gggaattgatccaatatccatgatattgcaaaccatatctcacagataacagatattaac 481
Query: 3019 cacaaagca 3027
|||||||||
Sbjct: 480 cacaaagca 472
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 147 bits (74), Expect = 4e-033
Identities = 263/326 (80%)
Strand = Plus / Minus
Query: 2026 acacatccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgata 2085
|||||||||||||||||||| | ||| || |||| ||||| | |||||||||||| |||
Sbjct: 1771 acacatccagtaccaacatatactggcccttgaaccccatctagacctttcatgtttata 1712
Query: 2086 tcaaaaaagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctt 2145
||||| || ||||| || || |||||||||| ||||||||||| || |||||||| ||
Sbjct: 1711 tcaaagaacacaacgttgcgattagcatatctatcatggcgatcgataccatcaaacctc 1652
Query: 2146 tgagggaactgtacatagcaaaccttctttcctagtaaagggtccatcataaaacacatt 2205
|| || ||||| |||||||| | |||||| || ||| || ||||||| ||| |||||
Sbjct: 1651 tgcggaaactggacatagcagagcttcttcccaagttggggatccatcaaaaagcacatg 1592
Query: 2206 gcttcctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatat 2265
||||| ||| |||||||||||| |||||||| || ||||||||||| || |||| | |
Sbjct: 1591 gcttctcttacagccttgctgttattgatgtaatggtcacaatccaaattcaacataaaa 1532
Query: 2266 ggagcatttgttagtacagcagagactcggaccaatgcattcatagcaccagctttctta 2325
|| ||||| || || || || ||||| | | || |||||||| ||||| ||||||||
Sbjct: 1531 ggtgcattggtgagcactgctgagacgagaatcagagcattcatggcacctgctttcttg 1472
Query: 2326 tgatggttatagcctggtcgtttctc 2351
|| |||||||| || |||||||||||
Sbjct: 1471 tggtggttatatccaggtcgtttctc 1446
Score = 83.8 bits (42), Expect = 5e-014
Identities = 165/206 (80%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacgaacattgtttccaggccagggggttccatcttgc 2481
|||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||
Sbjct: 1375 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1316
Query: 2482 attgtccatccttcttcaggaactttctgggctttggcaactaaggcattgattctcacc 2541
|| |||||||||||| || || ||||| || | || ||||| ||||| || ||
Sbjct: 1315 atcacccatccttcttctggtttcttttgggcctttgacaccaaggcgttgatccttact 1256
Query: 2542 ttgaattcctcatactctctcttcattgctctcctctccctaacaaagtttgctgccacc 2601
|||||||| ||||| ||||| ||||| ||||| | |||| | |||||||| | |||
Sbjct: 1255 ttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcact 1196
Query: 2602 ttgtctttcaagtagtctatcttctg 2627
||||||||||||||||| ||||||||
Sbjct: 1195 ttgtctttcaagtagtcaatcttctg 1170
Score = 75.8 bits (38), Expect = 1e-011
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
|||||||||||| |||| | || ||||||||| || ||||| ||||||||||| |||||
Sbjct: 3028 gtcctgttttgctttcccatcagacctttgaggaaaggatagagatggacaatgacccag 2969
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 2968 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 2919
Score = 73.8 bits (37), Expect = 5e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 1536 acaatgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaat 1595
||||||||||||||| || || || |||||||||||||| || ||||| ||||| ||||
Sbjct: 2282 acaatgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaac 2223
Query: 1596 ctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttc 1652
|||||| ||||| || || || |||||||| || ||||| || ||||| || |||||
Sbjct: 2222 ctctttaccccattcggttttttcttcatacccgcaacttataacatgaatggcttc 2166
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 145 bits (73), Expect = 2e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 1539 atgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaatctc 1598
|||||||||||| ||||| | ||||||||||||||| || ||||||||||| ||||||||
Sbjct: 137 atgcatcttgaacccagtcaaaatatcttctgtaacagaaccatagatccatccaatctc 78
Query: 1599 ttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttctttcaa 1658
||| ||||| || |||||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 77 tttgccccattcagtcttgtcttcatatccacagctaataacatggatagcttctttcaa 18
Query: 1659 aagag 1663
|||||
Sbjct: 17 aagag 13
Score = 73.8 bits (37), Expect = 5e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 1117 atgacccagaactgctcattcctccaccagtcatcaattccaacaccactccatctcatt 1176
||||||||||| || ||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 559 atgacccagaattgttcattcctccaccagtcttcaataccaactccactccatctaagc 500
Query: 1177 tctaggatgctcgtagcaaaaatgcagataaaaagtgacatgaaccacaggctggca 1233
|| || || | |||||||||||| |||| ||||| |||||||||| |||||||
Sbjct: 499 tcaagtattccagtagcaaaaatggagatgaaaagcagaatgaaccacatgctggca 443
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 143 bits (72), Expect = 6e-032
Identities = 186/224 (83%)
Strand = Plus / Plus
Query: 1432 agagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttg 1491
|||||||| |||||||| |||| |||||||| |||||||| | ||| ||||| |||||
Sbjct: 365 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 424
Query: 1492 aatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaa 1551
|| || || || || || || |||||||||||||||||| | ||||||||| |||
Sbjct: 425 aaggccgggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaa 484
Query: 1552 ccagttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtct 1611
||||| ||||||||||||||||| || ||||||||||| |||||||| |||||| |||
Sbjct: 485 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 544
Query: 1612 gtcttgtcttcataaccacaactaatgacatgtatagcttcttt 1655
|| |||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 545 gttttgttctcatacccacaactaatgacatgaatagcttcttt 588
Score = 79.8 bits (40), Expect = 8e-013
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1108 acacctccaatgacccagaactgctcattcctccaccagtcatcaattccaacaccactc 1167
||||| || |||||||| ||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 41 acaccaccgatgacccaaaactgttcattcctccaccactcatcaatcccaacaccactc 100
Query: 1168 catctcat 1175
|| |||||
Sbjct: 101 cacctcat 108
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 143 bits (72), Expect = 6e-032
Identities = 186/224 (83%)
Strand = Plus / Minus
Query: 1432 agagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttg 1491
|||||||| |||||||| |||| |||||||| |||||||| | ||| ||||| |||||
Sbjct: 487 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 428
Query: 1492 aatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaa 1551
|| || ||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 427 aaggctgggcgtttgggcatgcagtaaattgaccgccaaccacgggcatgcatcttgaat 368
Query: 1552 ccagttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtct 1611
||||| ||||||||||||||||| || ||||||||||| || ||||| |||||| |||
Sbjct: 367 ccagtaagaatatcttctgtaacagaaccatagatccatcctatctcagatccccaatct 308
Query: 1612 gtcttgtcttcataaccacaactaatgacatgtatagcttcttt 1655
|| ||||| || |||||||| || |||||||| ||||| |||||
Sbjct: 307 gttttgtcctcgtaaccacagctgatgacatgaatagcctcttt 264
>gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 429
Score = 139 bits (70), Expect = 1e-030
Identities = 229/282 (81%)
Strand = Plus / Minus
Query: 2070 acctttcatgttgatatcaaaaaagacaacattccggttagcatatcggtcatggcgatc 2129
|||||||||||| |||||||| || ||||| || || |||||||||| |||||||||||
Sbjct: 399 acctttcatgtttatatcaaagaacacaacgttgcgattagcatatctatcatggcgatc 340
Query: 2130 aatcccatcaaatctttgagggaactgtacatagcaaaccttctttcctagtaaagggtc 2189
|| |||||||| || || || ||||| |||||||| | |||||| || ||| || ||
Sbjct: 339 gataccatcaaacctctgcggaaactggacatagcagagcttcttcccaagttggggatc 280
Query: 2190 catcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatcacaatc 2249
||||| ||| ||||| ||||| ||| |||||||||||| |||||||| || ||||||||
Sbjct: 279 catcaaaaagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatc 220
Query: 2250 caagtttaacaaatatggagcatttgttagtacagcagagactcggaccaatgcattcat 2309
||| || |||| | | || ||||| || || || || |||||||| | || ||||||||
Sbjct: 219 caaattcaacataaaaggtgcattggtgagcactgctgagactcgaatcagggcattcat 160
Query: 2310 agcaccagctttcttatgatggttatagcctggtcgtttctc 2351
||||| |||||||| || |||||||| || |||||||||||
Sbjct: 159 ggcacctgctttcttgtggtggttatatccaggtcgtttctc 118
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacg 2447
||||||||||||||||||||||||||
Sbjct: 47 acctgaatcattccaggatgatcacg 22
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 137 bits (69), Expect = 4e-030
Identities = 111/125 (88%)
Strand = Plus / Minus
Query: 1539 atgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaatctc 1598
|||||||||||| || || | ||||||||||||||| || ||||||||||| ||||||||
Sbjct: 367 atgcatcttgaacccggtcaaaatatcttctgtaacggaaccatagatccatccaatctc 308
Query: 1599 ttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttctttcaa 1658
||| ||||| || |||||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 307 tttgccccattcagtcttgtcttcatatccacagctaataacatggatagcttctttcaa 248
Query: 1659 aagag 1663
|||||
Sbjct: 247 aagag 243
Score = 75.8 bits (38), Expect = 1e-011
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 760 agaatggaccagacgatgacaatcgttggtgtcctgttttgccttccaaccaaacctttg 819
||||| ||||||||||||||||| ||||| || | ||||||| || | |||||| |||
Sbjct: 806 agaatagaccagacgatgacaattgttggcgttcgattttgccgacccaacaaacccttg 747
Query: 820 agaaagggataaagatggacaatcacccaaaatgcaaagaatagcttcccaaagaggggg 879
|| || ||||| | |||| |||| ||||||| |||||||| ||||| |||||||| ||
Sbjct: 746 aggaaaggatacaaatgggcaatgacccaaatagcaaagaagagcttgccaaagagagga 687
Query: 880 ccccatgact 889
||||||||||
Sbjct: 686 ccccatgact 677
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 135 bits (68), Expect = 1e-029
Identities = 185/224 (82%)
Strand = Plus / Minus
Query: 1432 agagcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttg 1491
|||||||| |||||||| |||| |||||||| |||||||| | ||| ||||| |||||
Sbjct: 2700 agagcccatcgaagcacttggttcagacgatcagaaagattaataggagcagacccttta 2641
Query: 1492 aatgcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaa 1551
|| || || || || || || ||||||||||||||||| | ||||||||| ||
Sbjct: 2640 aaggctgggcgcttgggcatacaataaattgaccgccaaccccgggcatgcatcttaaac 2581
Query: 1552 ccagttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtct 1611
||||| ||||||||||||||||| || ||||||||||| |||||||| |||||| |||
Sbjct: 2580 ccagtaagaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatct 2521
Query: 1612 gtcttgtcttcataaccacaactaatgacatgtatagcttcttt 1655
|| ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 2520 gttttgtcctcatacccacaactaatgacatgaatagcttcttt 2477
Score = 117 bits (59), Expect = 3e-024
Identities = 410/527 (77%)
Strand = Plus / Minus
Query: 1996 tcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccc 2055
||||||||||| |||||| ||| |||| |||||||||||||| ||||| | || ||
Sbjct: 2157 tcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagacaggtcct 2098
Query: 2056 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatat 2115
||||||||||||| ||| ||| ||| |||||||| || ||| ||| || || ||||||
Sbjct: 2097 tgaataccatccagacccctcaagtttatatcaaagaatacagtattgcgattggcatat 2038
Query: 2116 cggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttcttt 2175
|| |||| | ||||| |||||||||||||| || ||||| |||||||| || | ||
Sbjct: 2037 cgatcattcctgtcaatgccatcaaatctttgtggaaactgaacatagcagacatgtttc 1978
Query: 2176 cctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatg 2235
|| || ||| ||| |||| |||||||| ||||| | | ||||||||| |||| |||
Sbjct: 1977 ccaaggttaggatccttcatgaaacacatagcttctctcaaagccttgctaatgtttatg 1918
Query: 2236 tagtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagactcgg 2295
|||||||||||||| | || ||||| | || |||| ||||| || || || || ||
Sbjct: 1917 tagtgatcacaatcaagattcaacaagaaaggcccattagttagcacggctgatacacga 1858
Query: 2296 accaatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctctcta 2355
|| | || |||||| |||||||||||||| || || | |||| || || || || | |
Sbjct: 1857 acaagtgaattcatggcaccagctttcttgtggtgctggaagccaggacgcttttcacga 1798
Query: 2356 gaaacataaaccaatcgtggcagttcatttccctcacagtcaaggcctccgctttggcca 2415
||||||||||| || || || || ||||| || ||| | ||||| ||||| ||||||||
Sbjct: 1797 gaaacataaactaaccgcggaagctcattaccatcagaatcaagccctccactttggccc 1738
Query: 2416 aggaagacctgaatcattccaggatgatcacgaacattgtttccaggccagggggttcca 2475
| ||| |||||||||||||| ||||| || | || ||||||||||| ||||| |||
Sbjct: 1737 aagaaaacctgaatcattcctggatggtctctggtgttatttccaggccatggggtccca 1678
Query: 2476 tcttgcattgtccatccttcttcaggaactttctgggctttggcaac 2522
|||||||| |||||||||||||||| || || || || ||||||||
Sbjct: 1677 tcttgcataatccatccttcttcaggcaccttttgcgccttggcaac 1631
Score = 85.7 bits (43), Expect = 1e-014
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 2608 ttcaagtagtctatcttctgttggaagtaccactctggagcgcgaggttcaatattgtac 2667
||||||||||| ||||| ||| |||||||| |||||||| ||||| ||||| |||||
Sbjct: 1545 ttcaagtagtcaatcttttgtgcaaagtaccattctggagcccgaggctcaatgctgtac 1486
Query: 2668 cgtttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaac 2727
|||||||| || ||||||||| | | ||| || || || ||||| || ||||||||
Sbjct: 1485 ttcttgcagaagggcacccatttcctggaaaactctgaagtctcagacaaagcttcaaat 1426
Query: 2728 gttagcattgcagcaccatcatcagaaacatagca 2762
|| | ||||||||||||||||||||| ||||||||
Sbjct: 1425 gtcaacattgcagcaccatcatcagagacatagca 1391
Score = 79.8 bits (40), Expect = 8e-013
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1108 acacctccaatgacccagaactgctcattcctccaccagtcatcaattccaacaccactc 1167
||||| || |||||||| ||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 3024 acaccaccgatgacccaaaactgttcattcctccaccactcatcaatcccaacaccactc 2965
Query: 1168 catctcat 1175
|| |||||
Sbjct: 2964 cacctcat 2957
Score = 73.8 bits (37), Expect = 5e-011
Identities = 118/145 (81%)
Strand = Plus / Minus
Query: 745 aagattgaagccagcagaatggaccagacgatgacaatcgttggtgtcctgttttgcctt 804
||||||||||| || ||||| ||||| |||| ||||| || ||||||| ||| || |
Sbjct: 3390 aagattgaagcaaggagaatagaccacacgacaacaatggtgggtgtccggttctggcga 3331
Query: 805 ccaaccaaacctttgagaaagggataaagatggacaatcacccaaaatgcaaagaatagc 864
|| | ||||||||| || || ||||| |||||||| |||||||| || || ||||| |||
Sbjct: 3330 cccatcaaaccttttaggaaaggatagagatggacgatcacccagaaagcgaagaaaagc 3271
Query: 865 ttcccaaagagggggccccatgact 889
|| |||||||| || ||||||||||
Sbjct: 3270 ttgccaaagagtggaccccatgact 3246
>gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 294
Score = 129 bits (65), Expect = 9e-028
Identities = 218/269 (81%)
Strand = Plus / Minus
Query: 997 agctctgagaactcctcatcatctccaccctttgatgtcacggtgaagcttgtatcaaca 1056
|||||||||||||| || || ||||| || || || || || |||||| | |||||||||
Sbjct: 294 agctctgagaactcatcgtcgtctcctcctttagacgtaacagtgaagttcgtatcaaca 235
Query: 1057 ccagctatgaccttgagaagtccctggaacacagcaaagaggtgtgaggacacacctcca 1116
||||||| ||||| | ||| ||||||||||| ||||| || |||| || || |||||
Sbjct: 234 ccagctagaacctttaaaagcccctggaacactgcaaatagatgtgctgatacccctccg 175
Query: 1117 atgacccagaactgctcattcctccaccagtcatcaattccaacaccactccatctcatt 1176
|| ||||| || ||||| || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 174 atcacccaaaattgctcgtttctccaccactcgtcaataccaaccccactccatctcatt 115
Query: 1177 tctaggatgctcgtagcaaaaatgcagataaaaagtgacatgaaccacaggctggcaaca 1236
|| || || || || || ||||| || || ||||| |||| ||||||||||||||| ||
Sbjct: 114 tccagtatacttgttgcgaaaatacaaatgaaaagagacaaaaaccacaggctggcagca 55
Query: 1237 ttattcagctctggagtgataaatttccc 1265
|| | ||||| ||||||||||| |||||
Sbjct: 54 ttgctgagctccggagtgataaacttccc 26
>gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 294
Score = 129 bits (65), Expect = 9e-028
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 997 agctctgagaactcctcatcatctccaccctttgatgtcacggtgaagcttgtatcaaca 1056
|||||||||||||| || || ||||| || || || || || |||||| | |||||||||
Sbjct: 1 agctctgagaactcatcgtcgtctcctcctttagacgtaacagtgaagttcgtatcaaca 60
Query: 1057 ccagctatgaccttgagaagtccctggaacacagcaaagaggtgtgaggacacacctcca 1116
||||||| ||||| | ||| ||||||||||| ||||| || |||| || || |||||
Sbjct: 61 ccagctagaacctttaaaagcccctggaacactgcaaatagatgtgctgatacccctccg 120
Query: 1117 atgacccagaactgctcattcctccaccagtcatcaattccaacaccactccatctcatt 1176
|| ||||| || ||||| || |||||||| || ||||| ||||| |||||||||||||||
Sbjct: 121 atcacccaaaattgctcgtttctccaccactcgtcaataccaaccccactccatctcatt 180
Query: 1177 tctaggatgctcgtagcaaaaatgcagataaaaagtgacatgaaccacaggctggcaaca 1236
|| || || || || || ||||| || || ||||| |||| ||||||||||||||| ||
Sbjct: 181 tccagtatacttgttgcgaaaatacaaatgaaaagagacaaaaaccacaggctggcagca 240
Query: 1237 ttattcagctctggagtgataaatttccc 1265
|| | ||||| ||||||||||| |||||
Sbjct: 241 ttgctgagctccggagtgataaacttccc 269
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 129 bits (65), Expect = 9e-028
Identities = 110/125 (88%)
Strand = Plus / Minus
Query: 1539 atgcatcttgaaaccagttagaatatcttctgtaactgatccatagatccagccaatctc 1598
||||||||| || ||||| | ||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2403 atgcatcttaaacccagtcaaaatatcttctgtaacagacccatagatccatccaatctc 2344
Query: 1599 ttttccccagtctgtcttgtcttcataaccacaactaatgacatgtatagcttctttcaa 1658
||| |||| || |||||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 2343 tttggcccattcagtcttgtcttcatatccacagctaataacatggatagcttctttcaa 2284
Query: 1659 aagag 1663
|||||
Sbjct: 2283 aagag 2279
Score = 93.7 bits (47), Expect = 5e-017
Identities = 125/151 (82%)
Strand = Plus / Minus
Query: 2422 acctgaatcattccaggatgatcacgaacattgtttccaggccagggggttccatcttgc 2481
|||||||||||||| || ||||| | ||| ||||||||||| || |||||||| |||
Sbjct: 1550 acctgaatcattcctgggtgatccctgggattatttccaggccatggagttccatcctgc 1491
Query: 2482 attgtccatccttcttcaggaactttctgggctttggcaactaaggcattgattctcacc 2541
|||||||| |||||||| || | || || ||||||||||| | |||||||| | ||||
Sbjct: 1490 attgtccaaccttcttctggcatcttttgagctttggcaacaagagcattgatccgcacc 1431
Query: 2542 ttgaattcctcatactctctcttcattgctc 2572
|||||||| ||||| ||||| ||||||||||
Sbjct: 1430 ttgaattcttcatattctcttttcattgctc 1400
Score = 79.8 bits (40), Expect = 8e-013
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 1114 ccaatgacccagaactgctcattcctccaccagtcatcaattccaacaccactccatctc 1173
|||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 2828 ccaatgacccagaattgttcattcctccaccagtcttcaataccaactccactccatcta 2769
Query: 1174 atttctaggatgctcgtagcaaaaatgcagataaaaagtgacatgaaccacaggctggca 1233
| || || || | |||||||||||| |||| ||||| |||||||||| |||||||
Sbjct: 2768 agctcaagtattccagtagcaaaaatggagatgaaaagcagaatgaaccacatgctggca 2709
Score = 79.8 bits (40), Expect = 8e-013
Identities = 237/300 (79%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 2032 ccagtaccaacataaattggaccctgaataccatccaaacctttcatgttgatatcaaaa 2091
||||| |||||||| | || ||||| || || |||| ||| |||| ||||||||||||
Sbjct: 1940 ccagttccaacatacacaggcccctggatgccgtccagacccttcaagttgatatcaaag 1881
Query: 2092 aagacaacattccggttagcatatcggtcatggcgatcaatcccatcaaatctttgaggg 2151
|| |||| ||| || || |||||||| || || ||||| |||||||| | ||| |||
Sbjct: 1880 aaaacaatattgcgattggcatatcgatcgtgcaagtcaatgccatcaaaacgttgtggg 1821
Query: 2152 aactgtacatagcaaaccttctttcc-tagtaaagggtccatcataaaacacattgcttc 2210
||||||| |||||| ||||||||| ||| | ||||||||||| |||||||| |||||
Sbjct: 1820 aactgtatatagcatgtcttctttccataggca-gggtccatcatgaaacacatggcttc 1762
Query: 2211 ctttatagccttgctgttgttgatgtagtgatcacaatccaagtttaacaaatatggagc 2270
|| | ||| |||||||| |||| ||||||||||||||| | ||| | | ||| | | |
Sbjct: 1761 tttaagagctttgctgttattgaagtagtgatcacaatcgacgttcagaagataggcacc 1702
Query: 2271 atttgttagtacagcagagactcggaccaatgcattcatagcaccagctttcttatgatg 2330
||| || |||||||| || ||||| | || ||||||||| || || |||||||| |||||
Sbjct: 1701 attggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtgatg 1642
Score = 75.8 bits (38), Expect = 1e-011
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 760 agaatggaccagacgatgacaatcgttggtgtcctgttttgccttccaaccaaacctttg 819
||||| ||||||||||||||||| ||||| || | ||||||| || | |||||| |||
Sbjct: 3185 agaatagaccagacgatgacaattgttggcgtacgattttgccgacccagcaaacccttg 3126
Query: 820 agaaagggataaagatggacaatcacccaaaatgcaaagaatagcttcccaaagaggggg 879
|| || ||||| | |||| |||| ||||||| |||||||| ||||| |||||||| ||
Sbjct: 3125 aggaaaggatacaaatgggcaatgacccaaatagcaaagaagagcttgccaaagagagga 3066
Query: 880 ccccatgact 889
||||||||||
Sbjct: 3065 ccccatgact 3056
Score = 63.9 bits (32), Expect = 5e-008
Identities = 101/124 (81%)
Strand = Plus / Minus
Query: 2956 tttgggaattgatcaagaatccaagacatggcaaaccagatttcacagataacagatatg 3015
||||| || ||||| |||| ||| |||| ||||||||| || ||||||||||||||| |
Sbjct: 1016 tttggaaactgatccagaagccaggacaaggcaaaccaaatctcacagataacagatgtc 957
Query: 3016 agccacaaagcaaatgcatcattcaccggatgcatcactcggtagtggaagaagaacccc 3075
| ||||||| | ||||||| ||||| ||||| | || || || || ||||||||||||
Sbjct: 956 aaccacaaaccgtatgcatctttcactggatgagttacacgatattgtaagaagaacccc 897
Query: 3076 aaaa 3079
||||
Sbjct: 896 aaaa 893
>gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partial cds
Length = 568
Score = 127 bits (64), Expect = 4e-027
Identities = 148/176 (84%)
Strand = Plus / Minus
Query: 1990 ggggcatcataaccatataatgcctgccttctaaatacacatccagtaccaacataaatt 2049
||||||||||| ||||| | ||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 176 ggggcatcatatccataaagtgcttgcctcctaaaaacgcatccagtaccaacatatata 117
Query: 2050 ggaccctgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggtta 2109
||||| || || |||||||| |||||||| ||||||||||| || |||||||| || |
Sbjct: 116 ggaccttgtatgccatccaatcctttcatattgatatcaaagaatacaacattacgatct 57
Query: 2110 gcatatcggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagca 2165
| |||| ||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 56 gagtatctatcatgacgatcaatcccatcaaatctttgtggaaactgaacatagca 1
Score = 103 bits (52), Expect = 5e-020
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1582 tagatccagccaatctcttttccccagtctgtcttgtcttcataaccacaactaatgaca 1641
|||||||| ||||||||||||||||| || || || ||||||||||||||||||||||||
Sbjct: 563 tagatccacccaatctcttttccccactcagttttatcttcataaccacaactaatgaca 504
Query: 1642 tgtatagcttctttcaaaag 1661
|| || ||||||||||||||
Sbjct: 503 tgaatggcttctttcaaaag 484
>gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M04_A09 5', mRNA sequence
Length = 677
Score = 121 bits (61), Expect = 2e-025
Identities = 253/317 (79%)
Strand = Plus / Minus
Query: 1315 gatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccg 1374
||||||||||||||||| | ||||| ||||| ||||||| ||||| | |||| ||
Sbjct: 505 gatgtccaaggatacacaacagagtttatgtaagaaaatcgttccagccacttcaatcca 446
Query: 1375 ccaccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaaga 1434
|| ||||| |||||||||| || || || | || ||||| ||||| | || |||||
Sbjct: 445 cccccataaccataccaaattggacagtgtctactaaagaaaatctcgactgaaccaagg 386
Query: 1435 gcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaat 1494
||||| ||||| |||||||| ||||||||||| || || | ||| || || || || |||
Sbjct: 385 gcccatcgaagaacctggtgtagacgatctgagaggttaataggagctgaccccttaaat 326
Query: 1495 gcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaacca 1554
||| ||| |||||||||||||| | |||||||| ||||| || ||||||||||| ||
Sbjct: 325 gcaggccgcttaggtatgcagtacacagaccgccacccatggcagtgcatcttgaatcct 266
Query: 1555 gttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtctgtc 1614
|| || ||||||||||| || || ||||| |||||||||| || || ||||| ||||||
Sbjct: 265 gtcaggatatcttctgttacagaaccatatatccagccaacttccttgccccattctgtc 206
Query: 1615 ttgtcttcataaccaca 1631
|| ||||||||||||||
Sbjct: 205 ttatcttcataaccaca 189
>gb|AF417485.1| Populus tremuloides cellulose synthase (CesA2) gene, partial cds
Length = 1335
Score = 119 bits (60), Expect = 9e-025
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 1937 agcaccacttgggccagcagttgcaagtccttgatggtggcttctttgttttgggggcat 1996
|||||||||| ||| |||||||||| ||||| | ||||| ||||||||||| || ||||
Sbjct: 314 agcaccacttaggcaagcagttgcatgtcctcgttggtgatttctttgtttttggagcat 255
Query: 1997 cataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccct 2056
|||||||||| | ||| |||||||| || ||||||||||| || ||||| || || || |
Sbjct: 254 cataaccataaagtgcgtgccttctgaaaacacatccagtccctacatatataggtcctt 195
Query: 2057 gaataccatccaaacctttcatgttgat 2084
|||| ||||||||||||||||| |||||
Sbjct: 194 gaatgccatccaaacctttcatattgat 167
>gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 663
Score = 117 bits (59), Expect = 3e-024
Identities = 286/363 (78%)
Strand = Plus / Minus
Query: 1315 gatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccg 1374
||||||||||||||||| | ||||| ||||| |||||| ||||| | |||| ||
Sbjct: 520 gatgtccaaggatacacaacagagtttatgtaagaaaatngttccagccacttcaatcca 461
Query: 1375 ccaccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaaga 1434
|||||||| |||||||||| || || || | | ||||| ||||| | || |||||
Sbjct: 460 ccaccataaccataccaaattggacagtgtctantaaagaaaatctcgantgaaccaagg 401
Query: 1435 gcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaat 1494
|||||| |||| |||||||| ||||||||||| || || | ||| || || || || |||
Sbjct: 400 gcccacngaagaacctggtgtagacgatctgagaggttaataggagccgaccccttaaat 341
Query: 1495 gcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaacca 1554
||| ||| |||||||||||||| | |||||||| || || || ||||||||||| ||
Sbjct: 340 gcaggccgcttaggtatgcagtacacagaccgccacccgtggcagtgcatcttgaatcct 281
Query: 1555 gttagaatatcttctgtaactgatccatagatccagccaatctcttttccccagtctgtc 1614
|| || ||||||||||| || || ||||| |||||||||| || || ||||| ||||||
Sbjct: 280 gtcaggatatcttctgttacagaaccataaatccagccaacttccttgccccattctgtc 221
Query: 1615 ttgtcttcataaccacaactaatgacatgtatagcttctttcaaaagagaagcaggactt 1674
|| |||||||||||||| || || || || || || ||| |||| || || |||||||||
Sbjct: 220 ttatcttcataaccacagctgataacttgaatggcctctctcaacagtgatgcaggactt 161
Query: 1675 gca 1677
|||
Sbjct: 160 gca 158
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 769
Score = 115 bits (58), Expect = 1e-023
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 1081 tggaacacagcaaagaggtgtgaggacacacctccaatgacccagaactgctcattcctc 1140
||||| ||||||||||| || | |||||||||||||| ||||||||||| |||||||||
Sbjct: 342 tggaagacagcaaagagatgagctgacacacctccaataacccagaactgttcattcctc 283
Query: 1141 caccagtcatcaattccaacaccactccatctcatttc 1178
||||| ||||| || |||||||||||||||||||||||
Sbjct: 282 caccattcatcgatcccaacaccactccatctcatttc 245
Score = 61.9 bits (31), Expect = 2e-007
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 778 acaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaagatgg 837
|||||||| ||||| | |||||| | ||| | || ||| ||||| || |||||||||||
Sbjct: 649 acaatcgtaggtgttcggttttggcgtcccatcagacccttgaggaaaggataaagatga 590
Query: 838 acaatcacccaaaatgcaaagaatagcttcccaaagagggggcccca 884
| ||||||||| || |||||||| ||||| |||||||| || |||||
Sbjct: 589 ataatcacccagaaagcaaagaaaagcttgccaaagagaggacccca 543
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 115 bits (58), Expect = 1e-023
Identities = 103/118 (87%)
Strand = Plus / Minus
Query: 2455 tttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctgggct 2514
||||||||||| || |||||||| ||||| ||||| ||||||||||| | ||||| |||
Sbjct: 336 tttccaggccatggagttccatcctgcatcgtccaaccttcttcaggcatcttctgagct 277
Query: 2515 ttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
|||||||| | |||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 276 ttggcaacaagagcattgattcgcaccttgaattcttcatattctctcttcattgctc 219
Score = 52.0 bits (26), Expect = 2e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 2184 agggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatc 2243
|||||||||||| |||||||| |||| ||| | ||| || ||||| |||| |||||||||
Sbjct: 606 agggtccatcatgaaacacatggctt-cttgagagctttactgttattgaagtagtgatc 548
Query: 2244 acaatc 2249
||||||
Sbjct: 547 acaatc 542
Score = 48.1 bits (24), Expect = 0.003
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||||||||| ||||| ||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 120 ttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaatgtc 61
Query: 2731 agcattgcagcaccatcatcagaaacatagca 2762
| |||||| | ||||||||| || ||||||||
Sbjct: 60 aacattgctgaaccatcatctgagacatagca 29
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 115 bits (58), Expect = 1e-023
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 1081 tggaacacagcaaagaggtgtgaggacacacctccaatgacccagaactgctcattcctc 1140
||||| ||||||||||| || | |||||||||||||| ||||||||||| |||||||||
Sbjct: 509 tggaagacagcaaagagatgagctgacacacctccaataacccagaactgttcattcctc 450
Query: 1141 caccagtcatcaattccaacaccactccatctcatttc 1178
||||| ||||| || |||||||||||||||||||||||
Sbjct: 449 caccattcatcgatcccaacaccactccatctcatttc 412
>gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B06F1, mRNA sequence
Length = 575
Score = 113 bits (57), Expect = 5e-023
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 1567 tctgtaactgatccatagatccagccaatctcttttccccagtctgtcttgtcttcataa 1626
|||||||| || ||||||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 575 tctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 516
Query: 1627 ccacaactaatgacatgtatagcttctttcaaaagag 1663
||||| ||||| ||||| |||||||||||||||||||
Sbjct: 515 ccacagctaataacatggatagcttctttcaaaagag 479
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 107 bits (54), Expect = 3e-021
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 2455 tttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctgggct 2514
||||||||||| || |||||||| ||||||||||| |||||||| || | ||||| |||
Sbjct: 330 tttccaggccatggagttccatcctgcattgtccaaccttcttctggcatcttctgagct 271
Query: 2515 ttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
|||||||| | |||||||| | |||||||||||| ||||| ||||||||||||||||
Sbjct: 270 ttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcattgctc 213
Score = 61.9 bits (31), Expect = 2e-007
Identities = 118/147 (80%)
Strand = Plus / Minus
Query: 2184 agggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatc 2243
|||||||||||| | |||||| ||||| || | ||| |||||||| |||| |||||||||
Sbjct: 601 agggtccatcatgacacacatggcttctttaagagctttgctgttattgaagtagtgatc 542
Query: 2244 acaatccaagtttaacaaatatggagcatttgttagtacagcagagactcggaccaatgc 2303
|||||| | ||| | | ||| | | |||| || |||||||| || ||||| | || |||
Sbjct: 541 acaatcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaatcagtgc 482
Query: 2304 attcatagcaccagctttcttatgatg 2330
|||||| || || |||||||| |||||
Sbjct: 481 attcattgctccggctttcttgtgatg 455
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||||||||| ||||| ||| ||||||| || | |||||||| | |||||||||||
Sbjct: 114 ttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaacgtc 55
Query: 2731 agcattgcagcaccatcatcagaaacatagca 2762
| ||| || | ||||||||| |||||||||||
Sbjct: 54 aacatagctgaaccatcatctgaaacatagca 23
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 107 bits (54), Expect = 3e-021
Identities = 102/118 (86%)
Strand = Plus / Minus
Query: 2455 tttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctgggct 2514
||||||||||| || |||||||| ||||||||||| |||||||| || | ||||| |||
Sbjct: 338 tttccaggccacggagttccatcctgcattgtccaaccttcttctggcatcttctgagct 279
Query: 2515 ttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
|||||||| | |||||||| | |||||||||||| ||||| ||||||||||||||||
Sbjct: 278 ttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcattgctc 221
Score = 71.9 bits (36), Expect = 2e-010
Identities = 163/204 (79%), Gaps = 1/204 (0%)
Strand = Plus / Minus
Query: 2128 tcaatcccatcaaatctttgagggaactgtacatagcaaaccttctttcctagtaaaggg 2187
||||| |||||||| | ||| |||||||||||||||| ||||||||| | ||||
Sbjct: 666 tcaatgccatcaaaacgttgtgggaactgtacatagcctgtcttctttccatatgcaggg 607
Query: 2188 tccatcataaaac-acattgcttcctttatagccttgctgttgttgatgtagtgatcaca 2246
|||||||| |||| |||| ||||| |||| ||| |||||||| |||| ||||||||||||
Sbjct: 606 tccatcatgaaacnacatggcttcttttagagctttgctgttattgaagtagtgatcaca 547
Query: 2247 atccaagtttaacaaatatggagcatttgttagtacagcagagactcggaccaatgcatt 2306
||| | ||| | | ||| | | |||| || |||||||| || ||||| | || ||||||
Sbjct: 546 atcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaatcagtgcatt 487
Query: 2307 catagcaccagctttcttatgatg 2330
||| || || |||||||| |||||
Sbjct: 486 cattgctccggctttcttgtgatg 463
Score = 48.1 bits (24), Expect = 0.003
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||||||||| ||||| ||| ||||||| || | |||||||| | |||||||| ||
Sbjct: 122 ttgcagaaaggcacccacttccttgcaaactctgcagtttcagaaagggcttcaaatgtc 63
Query: 2731 agcattgcagcaccatcatcagaaacatagca 2762
| ||| || | ||||||||| |||||||||||
Sbjct: 62 aacatagctgaaccatcatctgaaacatagca 31
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 107 bits (54), Expect = 3e-021
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1105 gacacacctccaatgacccagaactgctcattcctccaccagtcatcaattccaacacca 1164
|||||||||||||| ||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 769 gacacacctccaataacccagaactgctcatttctccaccattcgtcaatcccaacacca 828
Query: 1165 ctccatctcatttc 1178
||||||||||||||
Sbjct: 829 ctccatctcatttc 842
Score = 56.0 bits (28), Expect = 1e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 829 taaagatggacaatcacccaaaatgcaaagaatagcttcccaaagagggggcccca 884
|||||||| | ||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 489 taaagatgaataatcacccagaaagcaaagaaaagcttgccaaagaggggacccca 544
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 103 bits (52), Expect = 5e-020
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 778 acaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaagatgg 837
||||| || ||||||||||||||||| || | |||||||||||| || || |||||||||
Sbjct: 276 acaatagtcggtgtcctgttttgcctccccatcaaacctttgaggaacgggtaaagatgg 335
Query: 838 acaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgact 889
||||||||||| || |||||||| |||||||| || || || ||||||||||
Sbjct: 336 acaatcacccagaaggcaaagaagagcttcccgaatagaggtccccatgact 387
>gb|BP927588.1|BP927588 BP927588 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-073_N03.f 5', mRNA sequence
Length = 403
Score = 103 bits (52), Expect = 5e-020
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 1504 ttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaaccagttagaata 1563
|||||||||||||||| |||||||| ||||| || ||||||||||| || || | |||
Sbjct: 360 ttaggtatgcagtaaacagaccgccatccatggcagtgcatcttgaatcctgtcaagata 301
Query: 1564 tcttctgtaactgatccatagatccagccaatctcttttccccagtctgtcttgtcttca 1623
||||||||||| || ||||| |||||||||| || |||||||| ||||| || ||||||
Sbjct: 300 tcttctgtaacagagccatatatccagccaacttcctttccccattctgttttatcttca 241
Query: 1624 taaccaca 1631
||||||||
Sbjct: 240 taaccaca 233
>gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 101 bits (51), Expect = 2e-019
Identities = 153/187 (81%)
Strand = Plus / Minus
Query: 979 gtccatttgaatgtatatagctctgagaactcctcatcatctccaccctttgatgtcacg 1038
||||| |||||| | || ||||||||||| || |||||||| | || |||||||| ||
Sbjct: 202 gtccacttgaatatgtaaagctctgagaattctccatcatctgctccttttgatgtaaca 143
Query: 1039 gtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagcaaagagg 1098
|||||| ||||| ||||||||| | |||||||| | |||||||| | |||||| |||
Sbjct: 142 gtgaagtttgtactaacaccagccaaaaccttgagcaaaccctggaagagagcaaacagg 83
Query: 1099 tgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatcaattcca 1158
||||| || ||||||||||| ||||| || || ||||| |||||||||||||| || ||
Sbjct: 82 tgtgatgaaacacctccaatcacccaaaattgttcatttctccaccagtcatctatcccg 23
Query: 1159 acaccac 1165
|||||||
Sbjct: 22 acaccac 16
>gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 450
Score = 101 bits (51), Expect = 2e-019
Identities = 153/187 (81%)
Strand = Plus / Minus
Query: 979 gtccatttgaatgtatatagctctgagaactcctcatcatctccaccctttgatgtcacg 1038
||||| |||||| | || ||||||||||| || |||||||| | || |||||||| ||
Sbjct: 202 gtccacttgaatatgtaaagctctgagaattctccatcatctgctccttttgatgtaaca 143
Query: 1039 gtgaagcttgtatcaacaccagctatgaccttgagaagtccctggaacacagcaaagagg 1098
|||||| ||||| ||||||||| | |||||||| | |||||||| | |||||| |||
Sbjct: 142 gtgaagtttgtactaacaccagccaaaaccttgagcaaaccctggaagagagcaaacagg 83
Query: 1099 tgtgaggacacacctccaatgacccagaactgctcattcctccaccagtcatcaattcca 1158
||||| || ||||||||||| ||||| || || ||||| |||||||||||||| || ||
Sbjct: 82 tgtgatgaaacacctccaatcacccaaaattgttcatttctccaccagtcatctatcccg 23
Query: 1159 acaccac 1165
|||||||
Sbjct: 22 acaccac 16
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 99.6 bits (50), Expect = 8e-019
Identities = 101/118 (85%)
Strand = Plus / Minus
Query: 2455 tttccaggccagggggttccatcttgcattgtccatccttcttcaggaactttctgggct 2514
||||||||||| || ||||| || ||||||||||| |||||||| || | ||||| |||
Sbjct: 315 tttccaggccacggagttccgtcctgcattgtccaaccttcttctggcatcttctgagct 256
Query: 2515 ttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
|||||||| | |||||||| | |||||||||||| ||||| ||||||||||||||||
Sbjct: 255 ttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcattgctc 198
Score = 85.7 bits (43), Expect = 1e-014
Identities = 212/267 (79%), Gaps = 1/267 (0%)
Strand = Plus / Minus
Query: 2065 tccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatatcggtcatgg 2124
|||| ||| |||| |||||||||||| || |||| ||| || || |||||||| || ||
Sbjct: 706 tccagacccttcaagttgatatcaaagaaaacaatattgcgattggcatatcgatcgtgc 647
Query: 2125 cgatcaatcccatcaaat-ctttgagggaactgtacatagcaaaccttctttcctagtaa 2183
||||| |||||||| | ||| ||||||||||||||||| ||||||||| |
Sbjct: 646 aagtcaataccatcaaaaacgttgtgggaactgtacatagcatgtcttctttccatatgc 587
Query: 2184 agggtccatcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatc 2243
|||||||||||| |||||||| ||||| |||| ||| |||||||| |||| |||||||||
Sbjct: 586 agggtccatcatgaaacacatggcttcttttagagctttgctgttattgaagtagtgatc 527
Query: 2244 acaatccaagtttaacaaatatggagcatttgttagtacagcagagactcggaccaatgc 2303
|||||| | ||| | | ||| | | |||| || |||||||| || ||||| | || |||
Sbjct: 526 acaatcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaatcagtgc 467
Query: 2304 attcatagcaccagctttcttatgatg 2330
|||||| || || |||||||| |||||
Sbjct: 466 attcattgctccggctttcttgtgatg 440
>gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_F22 3', mRNA sequence
Length = 419
Score = 97.6 bits (49), Expect = 3e-018
Identities = 223/281 (79%)
Strand = Plus / Plus
Query: 1315 gatgtccaaggatacacgatggagttgatgtaggaaaatctttccaaaaatttcagaccg 1374
||||||||||||||||| | ||||| ||||| ||||||| ||||| | |||| ||
Sbjct: 133 gatgtccaaggatacacaacagagtttatgtaagaaaatcgttccagccacttcaatcca 192
Query: 1375 ccaccatacccataccaaagagggcaatgattgctgaagaagatctcaatagacccaaga 1434
|| ||||| |||||||||| || || || | || ||||| ||||| | || |||||
Sbjct: 193 cccccataaccataccaaattggacagtgtctactaaagaaaatctcgactgaaccaagg 252
Query: 1435 gcccaccgaagcacctggtgaagacgatctgaaagattcagaggtgcagaacctttgaat 1494
||||| ||||| |||||||| ||||||||||| || || | ||| || || || || |||
Sbjct: 253 gcccatcgaagaacctggtgtagacgatctgagaggttaataggagctgaccccttaaat 312
Query: 1495 gcaacccgtttaggtatgcagtaaattgaccgccaaccatgacaatgcatcttgaaacca 1554
||| ||| |||||||||||||| | |||||||| ||||| || ||||||||||| ||
Sbjct: 313 gcaggccgcttaggtatgcagtacacagaccgccacccatggcagtgcatcttgaatcct 372
Query: 1555 gttagaatatcttctgtaactgatccatagatccagccaat 1595
|| || ||||||||||| || || ||||| |||||||||||
Sbjct: 373 gtcaggatatcttctgttacagaaccatatatccagccaat 413
>gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 95.6 bits (48), Expect = 1e-017
Identities = 198/248 (79%)
Strand = Plus / Minus
Query: 1408 ctgaagaagatctcaatagacccaagagcccaccgaagcacctggtgaagacgatctgaa 1467
|||||||| ||||||| ||| ||||||||||| |||||||| |||| || ||||||||
Sbjct: 342 ctgaagaaaatctcaacagaaccaagagcccatcgaagcacttggttgagtcgatctgat 283
Query: 1468 agattcagaggtgcagaacctttgaatgcaacccgtttaggtatgcagtaaattgaccgc 1527
||||| | || || || || || |||||| | || || || |||||||| |||| |
Sbjct: 282 agattgatgggagctgagcccttaaatgcagctaactttggcatacagtaaatagacctc 223
Query: 1528 caaccatgacaatgcatcttgaaaccagttagaatatcttctgtaactgatccatagatc 1587
|| ||| ||||||||||||| ||||| || |||||||| ||||| | ||| || || |||
Sbjct: 222 catccacgacaatgcatcttaaaacctgtcagaatatcctctgtgattgaaccgtaaatc 163
Query: 1588 cagccaatctcttttccccagtctgtcttgtcttcataaccacaactaatgacatgtata 1647
||||| | ||| |||||| || |||||||||||||| |||||||| || ||||| ||
Sbjct: 162 cagcccagctcgagtccccattcagtcttgtcttcatacccacaactgatcacatggatg 103
Query: 1648 gcttcttt 1655
||||||||
Sbjct: 102 gcttcttt 95
>gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 441
Score = 93.7 bits (47), Expect = 5e-017
Identities = 104/123 (84%)
Strand = Plus / Minus
Query: 777 gacaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaagatg 836
|||||| || ||||||||||||||||| || | | ||||||||| || || || |||||
Sbjct: 164 gacaatagtgggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatg 105
Query: 837 gacaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactcatatcc 896
|||||||||||| || |||||||| ||||||||||| || || |||||||||| ||| ||
Sbjct: 104 gacaatcacccagaaggcaaagaagagcttcccaaatagaggtccccatgactgataccc 45
Query: 897 gtt 899
|||
Sbjct: 44 gtt 42
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 93.7 bits (47), Expect = 5e-017
Identities = 102/119 (85%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 2455 tttccaggccagggggttccatct-tgcattgtccatccttcttcaggaactttctgggc 2513
||||||||||| || |||||||| ||||||||||| |||||||| || | ||||| ||
Sbjct: 329 tttccaggccatggagttccatccgtgcattgtccaaccttcttctggcatcttctgagc 270
Query: 2514 tttggcaactaaggcattgattctcaccttgaattcctcatactctctcttcattgctc 2572
||||||||| | |||||||| | |||||||||||| ||||| ||||||||||||||||
Sbjct: 269 tttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcattgctc 211
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 2191 atcataaaacacattgcttcctttatagccttgctgttgttgatgtagtgatcacaatc 2249
||||| |||||||| ||||| || | ||| |||||||| |||| |||||||||||||||
Sbjct: 596 atcatgaaacacatggcttctttaagagctttgctgttattgaagtagtgatcacaatc 538
Score = 42.1 bits (21), Expect = 0.17
Identities = 76/93 (81%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 2671 ttgcagaaaggaacccatttctttgcaaattcagatgtttcagataatgcttcaaacgtt 2730
||||||||||| ||||| ||| ||||||| || | |||||||| | |||||||||||
Sbjct: 112 ttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaacgtc 53
Query: 2731 agcattgcagcaccatcatc-agaaacatagca 2762
| ||| || | ||||||||| |||||||||||
Sbjct: 52 aacatagctgaaccatcatcttgaaacatagca 20
>gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 490
Score = 91.7 bits (46), Expect = 2e-016
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 778 acaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaagatgg 837
||||| || ||||||||||||||||| || | | ||||||||| || || || ||||||
Sbjct: 234 acaatagtgggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 175
Query: 838 acaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactcatatccg 897
||||||||||| || |||||||| ||||||||||| || || |||||||||| ||| |||
Sbjct: 174 acaatcacccagaaggcaaagaagagcttcccaaatagaggtccccatgactgatacccg 115
Query: 898 tt 899
||
Sbjct: 114 tt 113
>gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 525
Score = 91.7 bits (46), Expect = 2e-016
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| || ||||| ||||||||||| |||||
Sbjct: 186 gtcctgttttgccttcccatcagacctttgaggaaaggatagagatggacaatgacccag 127
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || ||||||||| ||||||||||
Sbjct: 126 aaagcgaaaaatagcttcccaaataaaggaccccatgacccatatccgtt 77
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 91.7 bits (46), Expect = 2e-016
Identities = 346/446 (77%)
Strand = Plus / Plus
Query: 1996 tcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccc 2055
||||||||||| |||||| ||| |||| ||||||||||| || |||| | || ||
Sbjct: 134 tcataaccatacaatgccgtcctattaaagacacatccagtgcccgcatagacaggtcct 193
Query: 2056 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatat 2115
||||||||||||||||| || ||| |||||||| || ||| ||| || || ||||||
Sbjct: 194 tgaataccatccaaaccccccaagtttatatcaaagaacacagtattgcgattggcatat 253
Query: 2116 cggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttcttt 2175
|| |||| ||||| |||||||||||||| || || || |||||||| || | |||
Sbjct: 254 cgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcagacatgtttt 313
Query: 2176 cctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatg 2235
|| || ||| |||||||| |||||||| ||||| | | ||||||||| ||||| | |
Sbjct: 314 ccaagattaggatccatcatgaaacacatagcttctctcaaagccttgctattgtttacg 373
Query: 2236 tagtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagactcgg 2295
||||||||||| || | || ||||| | || |||| ||||| ||||| || || ||
Sbjct: 374 tagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagctgatacacga 433
Query: 2296 accaatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctctcta 2355
|| | ||||||||| |||||||||||||| || || | ||||||| || || || | |
Sbjct: 434 acaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgcttttcacga 493
Query: 2356 gaaacataaaccaatcgtggcagttcatttccctcacagtcaaggcctccgctttggcca 2415
||||||||||| || |||||||| ||||| || ||| ||||| ||||| ||||| ||
Sbjct: 494 gaaacataaactaaccgtggcagctcattaccatcagtatcaagccctccactttgccct 553
Query: 2416 aggaagacctgaatcattccaggatg 2441
| ||| |||||||||||||| |||||
Sbjct: 554 aagaaaacctgaatcattcctggatg 579
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 91.7 bits (46), Expect = 2e-016
Identities = 347/446 (77%), Gaps = 1/446 (0%)
Strand = Plus / Plus
Query: 1996 tcataaccatataatgcctgccttctaaatacacatccagtaccaacataaattggaccc 2055
||||||||||| |||||| ||| |||| ||||||||||| || ||||| | || ||
Sbjct: 131 tcataaccatacaatgccgtcctattaaagacacatccagtgcccacatagacaggtcct 190
Query: 2056 tgaataccatccaaacctttcatgttgatatcaaaaaagacaacattccggttagcatat 2115
||||||||||||||||| || ||| |||||||| || ||| ||| || || ||||||
Sbjct: 191 tgaataccatccaaaccccccaagtttatatcaaagaacacagtattgcgattggcatat 250
Query: 2116 cggtcatggcgatcaatcccatcaaatctttgagggaactgtacatagcaaaccttcttt 2175
|| |||| ||||| |||||||||||||| || || || |||||||| || | |||
Sbjct: 251 cgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcagacatgtttt 310
Query: 2176 cctagtaaagggtccatcataaaacacattgcttcctttatagccttgctgttgttgatg 2235
|| || ||| |||||||| |||||||| ||||| | | ||||||||| ||||| | |
Sbjct: 311 ccaagattaggatccatcatgaaacacatagcttctctcaaagccttgctattgtttacg 370
Query: 2236 tagtgatcacaatccaagtttaacaaatatggagcatttgttagtacagcagagactcgg 2295
||||||||||| || | || ||||| | || |||| ||||| ||||| || || ||
Sbjct: 371 tagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagctgatacacga 430
Query: 2296 accaatgcattcatagcaccagctttcttatgatggttatagcctggtcgtttctctcta 2355
|| | ||||||||| |||||||||||||| || || | ||||||| || || || | |
Sbjct: 431 acaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgcttttcacga 490
Query: 2356 gaaacataaaccaatcgtggcagttcatttccctcacagtcaaggcctccgctttggcca 2415
||||||||||| || |||||||| ||||| || ||| ||||| ||||| ||||| ||
Sbjct: 491 gaaacataaactaaccgtggcagctcattaccatcagtatcaagccctccactttgccct 550
Query: 2416 aggaagacctgaatcattccaggatg 2441
| ||| |||||||||||||| |||||
Sbjct: 551 aagaa-acctgaatcattcctggatg 575
>gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P74 5', mRNA sequence
Length = 389
Score = 91.7 bits (46), Expect = 2e-016
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 778 acaatcgttggtgtcctgttttgccttccaaccaaacctttgagaaagggataaagatgg 837
||||| || ||||||||||||||||| || | | ||||||||| || || || ||||||
Sbjct: 234 acaatagtgggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 175
Query: 838 acaatcacccaaaatgcaaagaatagcttcccaaagagggggccccatgactcatatccg 897
||||||||||| || |||||||| ||||||||||| || || |||||||||| ||| |||
Sbjct: 174 acaatcacccagaaggcaaagaagagcttcccaaatagaggtccccatgactgatacccg 115
Query: 898 tt 899
||
Sbjct: 114 tt 113
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 91.7 bits (46), Expect = 2e-016
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 524 gtcctgttttgccttcccatcagacctttgaggaagggatagagatggacaatgacccag 465
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 464 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 415
>gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_D10 5', mRNA sequence
Length = 796
Score = 91.7 bits (46), Expect = 2e-016
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 664 gtcctgttttgccttcccatcagacctttgaggaagggatagagatggacaatgacccag 605
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 604 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 555
>gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 673
Score = 91.7 bits (46), Expect = 2e-016
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 337 gtcctgttttgccttcccatcagacctttgaggaagggatagagatggacaatgacccag 278
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 277 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 228
>gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_G07
3', mRNA sequence
Length = 764
Score = 91.7 bits (46), Expect = 2e-016
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 790 gtcctgttttgccttccaaccaaacctttgagaaagggataaagatggacaatcacccaa 849
||||||||||||||||| | || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 353 gtcctgttttgccttcccatcagacctttgaggaagggatagagatggacaatgacccag 412
Query: 850 aatgcaaagaatagcttcccaaagagggggccccatgactcatatccgtt 899
|| || || |||||||||||||| | || |||||||| ||||||||||
Sbjct: 413 aaagcgaaaaatagcttcccaaataaaggaccccatgatccatatccgtt 462
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 575,502
Number of Sequences: 369679
Number of extensions: 575502
Number of successful extensions: 167225
Number of sequences better than 0.5: 179
Number of HSP's better than 0.5 without gapping: 176
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 166479
Number of HSP's gapped (non-prelim): 689
length of query: 4065
length of database: 203,408,664
effective HSP length: 20
effective length of query: 4045
effective length of database: 196,015,084
effective search space: 792881014780
effective search space used: 792881014780
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)