BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV240849.1|CV240849 WS02510.B21_I08 PT-MB-N-A-15 Populus... 188 2e-046
gb|CV250928.1|CV250928 WS0115.B21_E12 PT-P-FL-A-2 Populus t... 188 2e-046
gb|CV252008.1|CV252008 WS0119.B21_A18 PT-P-FL-A-2 Populus t... 188 2e-046
gb|DT498411.1|DT498411 WS0115.BR_E12 PT-P-FL-A-2 Populus tr... 188 2e-046
gb|DT498799.1|DT498799 WS0116.BR_G07 PT-P-FL-A-2 Populus tr... 188 2e-046
gb|BU829510.1|BU829510 K043P03P Populus apical shoot cDNA l... 180 4e-044
gb|BU831822.1|BU831822 T026B10 Populus apical shoot cDNA li... 180 4e-044
gb|BU871697.1|BU871697 Q033D07 Populus flower cDNA library ... 180 4e-044
gb|CA926733.1|CA926733 MTU6CR.P18.E08 Aspen root cDNA Libra... 180 4e-044
gb|CA927336.1|CA927336 MTU6CR.P7.G04 Aspen root cDNA Librar... 180 4e-044
gb|CV253438.1|CV253438 WS0221.B21_P01 PTxD-ICC-A-12 Populus... 180 4e-044
gb|DT495424.1|DT495424 WS01120.BR_G20 PT-P-FL-A-2 Populus t... 180 4e-044
gb|DT501462.1|DT501462 WS01312.BR_O12 PTxD-IL-FL-A-4 Populu... 180 4e-044
gb|DT504322.1|DT504322 WS01312.B21_O12 PTxD-IL-FL-A-4 Popul... 180 4e-044
gb|AJ775223.1|AJ775223 AJ775223 Populus euphratica shoot 3-... 178 2e-043
gb|CX658607.1|CX658607 PO01020A10 Poplar SC cDNA library Po... 176 7e-043
gb|BU819382.1|BU819382 UA43BPA04 Populus tremula cambium cD... 172 1e-041
gb|BU836038.1|BU836038 T081H12 Populus apical shoot cDNA li... 172 1e-041
gb|BU837939.1|BU837939 T107F04 Populus apical shoot cDNA li... 172 1e-041
gb|BU866303.1|BU866303 S065B06 Populus imbibed seed cDNA li... 172 1e-041
gb|BU870350.1|BU870350 Q011D09 Populus flower cDNA library ... 172 1e-041
gb|BU871570.1|BU871570 Q032A06 Populus flower cDNA library ... 172 1e-041
gb|CA926113.1|CA926113 MTU6CR.P10.B09 Aspen root cDNA Libra... 172 1e-041
gb|CA926215.1|CA926215 MTU6CR.P11.D03 Aspen root cDNA Libra... 172 1e-041
gb|CA926740.1|CA926740 MTU6CR.P18.F04 Aspen root cDNA Libra... 172 1e-041
gb|CA928398.1|CA928398 MTU6TR.P2.B11 Aspen root cDNA Librar... 172 1e-041
gb|CA928472.1|CA928472 MTU6TR.P3.B03 Aspen root cDNA Librar... 172 1e-041
gb|CA928815.1|CA928815 MTU6TR.P7.B10 Aspen root cDNA Librar... 172 1e-041
gb|CA934126.1|CA934126 MTU3TS.P3.C03 Aspen stem cDNA Librar... 172 1e-041
gb|CA934660.1|CA934660 MTU5TS.P22.A04 Aspen stem cDNA Libra... 172 1e-041
gb|CA934661.1|CA934661 MTU5TS.P22.A05 Aspen stem cDNA Libra... 172 1e-041
gb|CF231693.1|CF231693 PtaC0024E5E0509 Poplar cDNA library ... 172 1e-041
gb|CF233815.1|CF233815 PtaJXO0027H8H0816 Poplar cDNA librar... 172 1e-041
gb|CV247532.1|CV247532 WS01118.B21_H21 PT-P-FL-A-2 Populus ... 172 1e-041
gb|CV248006.1|CV248006 WS0112.B21_B04 PT-P-FL-A-2 Populus t... 172 1e-041
gb|CX653845.1|CX653845 PO02008A07 Poplar SC cDNA library Po... 172 1e-041
gb|DT494460.1|DT494460 WS01118.BR.1_H21 PT-P-FL-A-2 Populus... 172 1e-041
gb|DT495001.1|DT495001 WS0112.BR_B04 PT-P-FL-A-2 Populus tr... 172 1e-041
gb|DT496342.1|DT496342 WS01123.BR_C05 PT-P-FL-A-2 Populus t... 172 1e-041
gb|DT499168.1|DT499168 WS0117.BR_I03 PT-P-FL-A-2 Populus tr... 172 1e-041
gb|DT499698.1|DT499698 WS9991.BR_B11 PT-P-FL-A-2 Populus tr... 172 1e-041
gb|CA927974.1|CA927974 MTU6TR.P15.C02 Aspen root cDNA Libra... 170 4e-041
gb|CA928358.1|CA928358 MTU6TR.P1.F10 Aspen root cDNA Librar... 170 4e-041
gb|CK097086.1|CK097086 UB38BPE05.3pR Populus active cambium... 170 4e-041
gb|DT499680.1|DT499680 WS9991.BR_A15 PT-P-FL-A-2 Populus tr... 168 2e-040
gb|CA926831.1|CA926831 MTU6CR.P1.F10 Aspen root cDNA Librar... 167 6e-040
gb|AI164495.1|AI164495 A062p17u Hybrid aspen plasmid librar... 165 3e-039
gb|BI129599.1|BI129599 G093P08Y Populus cambium cDNA librar... 165 3e-039
gb|BI130975.1|BI130975 G113P43Y Populus cambium cDNA librar... 165 3e-039
gb|BU824344.1|BU824344 UB63CPC09 Populus tremula cambium cD... 165 3e-039
gb|BU825544.1|BU825544 UK110TA09 Populus apical shoot cDNA ... 165 3e-039
gb|BU826596.1|BU826596 UK122TE06 Populus apical shoot cDNA ... 165 3e-039
gb|BU829344.1|BU829344 K038P86P Populus apical shoot cDNA l... 165 3e-039
gb|BU830280.1|BU830280 T006C08 Populus apical shoot cDNA li... 165 3e-039
gb|BU830918.1|BU830918 T014G07 Populus apical shoot cDNA li... 165 3e-039
gb|BU835454.1|BU835454 T074B04 Populus apical shoot cDNA li... 165 3e-039
gb|BU837841.1|BU837841 T106C06 Populus apical shoot cDNA li... 165 3e-039
gb|BU893734.1|BU893734 P081F09 Populus petioles cDNA librar... 165 3e-039
gb|CA826273.1|CA826273 R75E11 two-month-old roots from clon... 165 3e-039
gb|CF237191.1|CF237191 Ptajxtjxt3B3B0303 Poplar cDNA librar... 165 3e-039
gb|CK087879.1|CK087879 A025P07.3pR Hybrid aspen plasmid lib... 165 3e-039
gb|CK117280.1|CK117280 B031P55 Hybrid aspen plasmid library... 165 3e-039
gb|CN521098.1|CN521098 GQ0107.B3_O14 GQ010 Populus trichoca... 165 3e-039
gb|CV255236.1|CV255236 WS02412.B21_H08 PTxD-ICC-N-A-14 Popu... 165 3e-039
gb|CX186252.1|CX186252 H07_45-104_15.ab1 leaf inoculated wi... 165 3e-039
gb|CX659186.1|CX659186 PO01027E07 Poplar SC cDNA library Po... 165 3e-039
gb|DT470095.1|DT470095 WS01919.C21_N18 PT-DX-N-A-10 Populus... 165 3e-039
gb|DT469252.1|DT469252 WS01917.C21_D13 PT-DX-N-A-10 Populus... 163 1e-038
gb|BI127570.1|BI127570 G062P48Y Populus cambium cDNA librar... 161 4e-038
gb|CV249135.1|CV249135 WS01123.B21_C05 PT-P-FL-A-2 Populus ... 161 4e-038
gb|BU828028.1|BU828028 K014P82P Populus apical shoot cDNA l... 157 6e-037
gb|BU835438.1|BU835438 T073H06 Populus apical shoot cDNA li... 157 6e-037
gb|BU872120.1|BU872120 Q039D11 Populus flower cDNA library ... 157 6e-037
gb|CF227680.1|CF227680 PtaXM0003B2B0204 Poplar cDNA library... 157 6e-037
gb|CF231676.1|CF231676 PtaC0024D11D1107 Poplar cDNA library... 157 6e-037
gb|CV264282.1|CV264282 WS02024.B21_B20 PTxN-IB-N-A-11 Popul... 157 6e-037
gb|CX175958.1|CX175958 H05_69-14-1_15.ab1 leaf inoculated w... 157 6e-037
gb|DT477283.1|DT477283 WS02519.BR_I04 PT-MB-N-A-15 Populus ... 157 6e-037
gb|DT482322.1|DT482322 WS02519.B21_I04 PT-MB-N-A-15 Populus... 157 6e-037
gb|DT525966.1|DT525966 WS02046.C21_M06 PTxN-IB-N-A-11 Popul... 157 6e-037
gb|BU827177.1|BU827177 UK129TD04 Populus apical shoot cDNA ... 155 2e-036
gb|CA925218.1|CA925218 MTU7TL.P15.B06 Aspen leaf cDNA Libra... 155 2e-036
gb|CF232207.1|CF232207 PtaJXO0007F6F0612 Poplar cDNA librar... 155 2e-036
gb|CF230777.1|CF230777 PtaC0012H8H0816 Poplar cDNA library ... 153 1e-035
gb|CV265778.1|CV265778 WS02028.B21_D06 PTxN-IB-N-A-11 Popul... 153 1e-035
gb|CV267986.1|CV267986 WS0204.B21_D22 PTxN-IB-N-A-11 Populu... 153 1e-035
gb|AI166176.1|AI166176 _A013P77U Hybrid aspen plasmid libra... 149 2e-034
gb|BU866705.1|BU866705 S069G10 Populus imbibed seed cDNA li... 149 2e-034
gb|BU881166.1|BU881166 UM59TD12 Populus flower cDNA library... 149 2e-034
gb|CA926169.1|CA926169 MTU6CR.P10.G09 Aspen root cDNA Libra... 149 2e-034
gb|CA934595.1|CA934595 MTU5TS.P21.A10 Aspen stem cDNA Libra... 149 2e-034
gb|CB240414.1|CB240414 PopSC00396 Poplar SC cDNA library Po... 149 2e-034
gb|CF230352.1|CF230352 PtaC0007C11C1105 Poplar cDNA library... 149 2e-034
gb|CK087549.1|CK087549 A013P77.3pR Hybrid aspen plasmid lib... 149 2e-034
gb|CK098677.1|CK098677 A025P07.5pR Hybrid aspen plasmid lib... 149 2e-034
gb|CV249561.1|CV249561 WS01124.B21_J09 PT-P-FL-A-2 Populus ... 149 2e-034
gb|CV250265.1|CV250265 WS0113.B21_A05 PT-P-FL-A-2 Populus t... 149 2e-034
gb|CV251047.1|CV251047 WS0115.B21_K18 PT-P-FL-A-2 Populus t... 149 2e-034
gb|DT495679.1|DT495679 WS01121.BR_C22 PT-P-FL-A-2 Populus t... 149 2e-034
gb|DT497624.1|DT497624 WS0113.BR_A05 PT-P-FL-A-2 Populus tr... 149 2e-034
gb|DT498562.1|DT498562 WS0115.BR_L06 PT-P-FL-A-2 Populus tr... 149 2e-034
gb|DT499236.1|DT499236 WS0117.BR_L03 PT-P-FL-A-2 Populus tr... 149 2e-034
gb|BU873670.1|BU873670 Q058C01 Populus flower cDNA library ... 147 6e-034
gb|AI162826.1|AI162826 A025P07U Hybrid aspen plasmid librar... 145 2e-033
gb|CV249961.1|CV249961 WS01125.B21_O04 PT-P-FL-A-2 Populus ... 145 2e-033
gb|DT497235.1|DT497235 WS01125.BR_O04 PT-P-FL-A-2 Populus t... 145 2e-033
gb|CA927800.1|CA927800 MTU6TR.P13.B02 Aspen root cDNA Libra... 141 4e-032
gb|CA934672.1|CA934672 MTU5TS.P22.B05 Aspen stem cDNA Libra... 141 4e-032
gb|CF231505.1|CF231505 PtaC0022C11C1105 Poplar cDNA library... 141 4e-032
gb|CK106907.1|CK106907 UB38BPE05.5pR Populus active cambium... 137 6e-031
gb|CK098412.1|CK098412 A013P77.5pR Hybrid aspen plasmid lib... 135 2e-030
gb|DT498551.1|DT498551 WS0115.BR_K18 PT-P-FL-A-2 Populus tr... 133 9e-030
gb|CF233788.1|CF233788 PtaJXO0027F4F0412 Poplar cDNA librar... 129 1e-028
gb|CA925470.1|CA925470 MTU7TL.P1.F03 Aspen leaf cDNA Librar... 127 6e-028
gb|CF234691.1|CF234691 PtaJXT0014A12A1202 Poplar cDNA libra... 121 3e-026
gb|CK108050.1|CK108050 G079P65 Populus tension wood cDNA li... 115 2e-024
gb|CV264534.1|CV264534 WS02024.B21_M13 PTxN-IB-N-A-11 Popul... 100 1e-019
gb|CX656078.1|CX656078 PO02046C09 Poplar SC cDNA library Po... 92 3e-017
gb|AI163020.1|AI163020 A029P55U Hybrid aspen plasmid librar... 90 1e-016
gb|CB239581.1|CB239581 RSH13H08 two-month-old roots from cl... 74 7e-012
gb|CK098759.1|CK098759 A029P55.5pR Hybrid aspen plasmid lib... 60 1e-007
gb|BU878760.1|BU878760 V051C02 Populus flower cDNA library ... 46 0.002
gb|CV251566.1|CV251566 WS0117.B21_I03 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV275070.1|CV275070 WS0175.B21_E02 PTxD-NR-A-8 Populus t... 46 0.002
gb|CV282939.1|CV282939 WS0186.B21_A03 PTxD-IL-N-A-9 Populus... 46 0.002
gb|BU836954.1|BU836954 T092H10 Populus apical shoot cDNA li... 42 0.025
gb|CX658232.1|CX658232 PO01011E10 Poplar SC cDNA library Po... 42 0.025
>gb|CV240849.1|CV240849 WS02510.B21_I08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_I08 3', mRNA sequence
Length = 710
Score = 188 bits (95), Expect = 2e-046
Identities = 185/215 (86%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 348 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 407
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 408 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 467
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 468 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 527
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 528 ttcttcggagaaagaccgagaggtccgattttggg 562
>gb|CV250928.1|CV250928 WS0115.B21_E12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0115_E12 3', mRNA sequence
Length = 685
Score = 188 bits (95), Expect = 2e-046
Identities = 185/215 (86%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 346 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 405
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 406 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 465
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 466 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 525
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 526 ttcttcggagaaagaccgagaggtccgattttggg 560
>gb|CV252008.1|CV252008 WS0119.B21_A18 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0119_A18 3', mRNA sequence
Length = 668
Score = 188 bits (95), Expect = 2e-046
Identities = 185/215 (86%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 362 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 421
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 422 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 481
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 482 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 541
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 542 ttcttcggagaaagaccgagaggtccgattttggg 576
>gb|DT498411.1|DT498411 WS0115.BR_E12 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0115_E12
5', mRNA sequence
Length = 696
Score = 188 bits (95), Expect = 2e-046
Identities = 185/215 (86%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 352 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 293
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 292 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 233
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 232 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 173
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 172 ttcttcggagaaagaccgagaggtccgattttggg 138
>gb|DT498799.1|DT498799 WS0116.BR_G07 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_G07
5', mRNA sequence
Length = 479
Score = 188 bits (95), Expect = 2e-046
Identities = 185/215 (86%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 341 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 282
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 281 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 222
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 221 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 162
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 161 ttcttcggagaaagaccgagaggtccgattttggg 127
>gb|BU829510.1|BU829510 K043P03P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 533
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 326 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 267
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 266 aaagctgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 207
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 206 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 147
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 146 ttcttcggagaaagaccgagaggtccgattttggg 112
>gb|BU831822.1|BU831822 T026B10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 511
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 307 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 248
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 247 aaagctgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 188
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 187 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 128
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 127 ttcttcggagaaagaccgagaggtccgattttggg 93
>gb|BU871697.1|BU871697 Q033D07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 547
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 485 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 426
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 425 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 366
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 365 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 306
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 305 ttcttgggggaaagtccgagaggtccgattttggg 271
>gb|CA926733.1|CA926733 MTU6CR.P18.E08 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 442
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 320 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 261
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 260 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 201
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 200 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 141
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 140 ttcttgggggaaagtccgagaggtccgattttggg 106
>gb|CA927336.1|CA927336 MTU6CR.P7.G04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 429
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 302
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 303 ttcttgggggaaagtccgagaggtccgattttggg 337
>gb|CV253438.1|CV253438 WS0221.B21_P01 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_P01 3', mRNA sequence
Length = 716
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 338 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 397
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| || || ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 398 aaagccgcggctgatggcacgacggtgaccttggcctgacggttctggacggtgagcttg 457
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 458 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 517
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 518 ttcttcggagaaagaccgagaggtccgattttggg 552
>gb|DT495424.1|DT495424 WS01120.BR_G20 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_G20 5', mRNA sequence
Length = 719
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 375 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 316
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| || || ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 315 aaagccgcggctgatggcacgacggtgaccttggcctgacggttctggacggtgagcttg 256
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 255 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 196
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 195 ttcttcggagaaagaccgagaggtccgattttggg 161
>gb|DT501462.1|DT501462 WS01312.BR_O12 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_O12 5', mRNA sequence
Length = 661
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 333 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 274
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 273 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 214
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || || ||
Sbjct: 213 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctcctatt 154
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 153 ttcttcggagaaagaccgagaggtccgattttggg 119
>gb|DT504322.1|DT504322 WS01312.B21_O12 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_O12 3', mRNA sequence
Length = 677
Score = 180 bits (91), Expect = 4e-044
Identities = 184/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 345 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 404
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 405 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 464
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || || ||
Sbjct: 465 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctcctatt 524
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 525 ttcttcggagaaagaccgagaggtccgattttggg 559
>gb|AJ775223.1|AJ775223 AJ775223 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300029F01F1, mRNA sequence
Length = 395
Score = 178 bits (90), Expect = 2e-043
Identities = 186/218 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 327 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 268
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 267 aaagccgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 208
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 207 acggtgactcggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 148
Query: 558 ttcttcggggagagaccgagcgggccgatcttgggggc 595
||||| || || || || || || ||||||||||||||
Sbjct: 147 ttcttgggagaaagtccaagaggaccgatcttgggggc 110
>gb|CX658607.1|CX658607 PO01020A10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020A10 5', mRNA sequence
Length = 533
Score = 176 bits (89), Expect = 7e-043
Identities = 179/209 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 321 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 380
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 381 aaagctgcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 440
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 441 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 500
Query: 558 ttcttcggggagagaccgagcgggccgat 586
|||||||| || |||||||| || |||||
Sbjct: 501 ttcttcggagaaagaccgagaggtccgat 529
>gb|BU819382.1|BU819382 UA43BPA04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 606
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 321 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 262
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 261 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 202
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 201 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 142
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 141 ttcttcggagaaagaccgagaggtccgattttggg 107
>gb|BU836038.1|BU836038 T081H12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 366 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 307
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| |||| || |||||||||||| |||||||| ||||||||||||
Sbjct: 306 aaagctgcggctgagggcacgatggtgaccttggcctgacggttctggacggtgagcttg 247
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 246 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 187
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 186 ttcttcggagaaagaccgagaggtccgattttggg 152
>gb|BU837939.1|BU837939 T107F04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 573
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || || || | ||||||||||||
Sbjct: 351 tgctttatgttctttgtcttcttcctgtctctctctggctctttcaacgccttgatgacc 292
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 291 aaagcggcggctgagggaacgacggtgaccttggcctgacggttctggacggtgagcttg 232
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 231 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 172
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || || ||||| || ||||| |||||
Sbjct: 171 ttcttgggagaaagtccgagaggtccgattttggg 137
>gb|BU866303.1|BU866303 S065B06 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 665
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 353 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 294
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 293 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 234
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 233 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 174
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 173 ttcttcggagaaagaccgagaggtccgattttggg 139
>gb|BU870350.1|BU870350 Q011D09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 676
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 365 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 306
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 305 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 246
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 245 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 186
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 185 ttcttcggagaaagaccgagaggtccgattttggg 151
>gb|BU871570.1|BU871570 Q032A06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 694
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 373 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 314
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 313 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 254
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 253 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 194
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 193 ttcttcggagaaagaccgagaggtccgattttggg 159
>gb|CA926113.1|CA926113 MTU6CR.P10.B09 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 437
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggaacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 302
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || || ||||| || ||||| |||||
Sbjct: 303 ttcttgggagaaagtccgagaggtccgattttggg 337
>gb|CA926215.1|CA926215 MTU6CR.P11.D03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 635
Score = 172 bits (87), Expect = 1e-041
Identities = 184/215 (85%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 302
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 303 ttctt-ggggaaagtccgagaggtccgattttggg 336
>gb|CA926740.1|CA926740 MTU6CR.P18.F04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 450
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| |
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatagcc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctccgatt 302
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 303 ttcttgggggaaagtccgagaggtccgattttggg 337
>gb|CA928398.1|CA928398 MTU6TR.P2.B11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 417
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 80 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 139
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 140 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 199
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 200 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 259
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 260 ttcttcggagaaagaccgagaggtccgattttggg 294
>gb|CA928472.1|CA928472 MTU6TR.P3.B03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 422
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 343 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 284
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 283 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 224
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 223 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 164
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 163 ttcttcggagaaagaccgagaggtccgattttggg 129
>gb|CA928815.1|CA928815 MTU6TR.P7.B10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 428
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 349 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 290
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 289 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 230
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 229 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 170
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 169 ttcttcggagaaagaccgagaggtccgattttggg 135
>gb|CA934126.1|CA934126 MTU3TS.P3.C03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 400
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 321 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 262
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 261 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 202
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 201 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 142
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 141 ttcttcggagaaagaccgagaggtccgattttggg 107
>gb|CA934660.1|CA934660 MTU5TS.P22.A04 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 411
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 330 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 271
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 270 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 211
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 210 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 151
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 150 ttcttcggagaaagaccgagaggtccgattttggg 116
>gb|CA934661.1|CA934661 MTU5TS.P22.A05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 411
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 330 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 271
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 270 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 211
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|| ||||| ||||||||||||||||||||||| || || ||||||||||| || |||||
Sbjct: 210 acagtgacacggaggcccttccagtccttggcagtttctttggcgatgtcttctccgatt 151
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 150 ttcttcggagaaagaccgagaggtccgattttggg 116
>gb|CF231693.1|CF231693 PtaC0024E5E0509 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 648
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 351 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 292
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 291 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 232
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || || ||
Sbjct: 231 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctcctatt 172
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || || ||||| || ||||| |||||
Sbjct: 171 ttcttgggagaaagtccgaggggtccgattttggg 137
>gb|CF233815.1|CF233815 PtaJXO0027H8H0816 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 615
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 350 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 291
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 290 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 231
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| |||||||||||||||||||||||||| || ||||||||||| || || ||
Sbjct: 230 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtcttctcctatt 171
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || || ||||| || ||||| |||||
Sbjct: 170 ttcttgggagaaagtccgaggggtccgattttggg 136
>gb|CV247532.1|CV247532 WS01118.B21_H21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_H21 3', mRNA sequence
Length = 660
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 403 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 462
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 463 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 522
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 523 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 582
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 583 ttcttgggagaaagaccaagcggtccgattttggg 617
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 238 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 284
>gb|CV248006.1|CV248006 WS0112.B21_B04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0112_B04 3', mRNA sequence
Length = 725
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 344 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 403
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 404 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 463
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 464 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 523
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 524 ttcttgggagaaagaccaagcggtccgattttggg 558
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 179 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 225
>gb|CX653845.1|CX653845 PO02008A07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02008A07 5', mRNA sequence
Length = 527
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| ||
Sbjct: 335 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgataacc 276
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| |||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 275 aaagccgcggctgagggcacgacggtaaccttggcctgacggttctggacggtgagcttg 216
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||| | || || ||||||||||| || |||||
Sbjct: 215 acggtgacacggaggcccttccagtccttgccagtttctttggcgatgtcttctccgatt 156
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
|||||||| || |||||||| || ||||| |||||
Sbjct: 155 ttcttcggagaaagaccgagaggtccgattttggg 121
>gb|DT494460.1|DT494460 WS01118.BR.1_H21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_H21 5', mRNA sequence
Length = 755
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 353 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 294
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 293 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 234
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 233 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 174
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 173 ttcttgggagaaagaccaagcggtccgattttggg 139
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 518 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 472
>gb|DT495001.1|DT495001 WS0112.BR_B04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0112_B04
5', mRNA sequence
Length = 579
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 353 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 294
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 293 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 234
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 233 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 174
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 173 ttcttgggagaaagaccaagcggtccgattttggg 139
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 518 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 472
>gb|DT496342.1|DT496342 WS01123.BR_C05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_C05 5', mRNA sequence
Length = 667
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 231 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 172
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 171 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 112
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 111 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 52
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 51 ttcttgggagaaagaccaagcggtccgattttggg 17
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 396 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 350
>gb|DT499168.1|DT499168 WS0117.BR_I03 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0117_I03
5', mRNA sequence
Length = 369
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 231 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 172
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 171 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 112
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 111 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 52
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 51 ttcttgggagaaagaccaagcggtccgattttggg 17
>gb|DT499698.1|DT499698 WS9991.BR_B11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01110_H19 5', mRNA sequence
Length = 421
Score = 172 bits (87), Expect = 1e-041
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 353 tgctttatgttcttcgtcttctttctgtctctctctggctccttcaacgccttgataacc 294
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 293 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 234
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 233 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 174
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| ||||| ||||| |||||
Sbjct: 173 ttcttgggagaaagaccaagcggtccgattttggg 139
>gb|CA927974.1|CA927974 MTU6TR.P15.C02 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 422
Score = 170 bits (86), Expect = 4e-041
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
|||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtc 292
>gb|CA928358.1|CA928358 MTU6TR.P1.F10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 651
Score = 170 bits (86), Expect = 4e-041
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 339 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 398
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 399 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 458
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
|||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 459 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtc 508
>gb|CK097086.1|CK097086 UB38BPE05.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB38BPE05 3', mRNA sequence
Length = 645
Score = 170 bits (86), Expect = 4e-041
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 293 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatgacc 352
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 353 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 412
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
|||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 413 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtc 462
>gb|DT499680.1|DT499680 WS9991.BR_A15 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0119_A18
5', mRNA sequence
Length = 334
Score = 168 bits (85), Expect = 2e-040
Identities = 160/185 (86%)
Strand = Plus / Minus
Query: 408 ctctcgggttccttgagcgccttgatgacgagcgccgcggcggaggggacgacggagacc 467
||||| || ||||| | ||||||||| || | |||||||| ||||| ||||||| ||||
Sbjct: 331 ctctctggctccttcaacgccttgataaccaaagccgcggctgagggcacgacggtgacc 272
Query: 468 ttggcctgccggttctgcacggtgagcttgacggtgacgcggaggcccttccagtccttg 527
|||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 271 ttggcctgacggttctggacggtgagcttgacggtgacacggaggcccttccagtccttg 212
Query: 528 gcggtctccttggcgatgtcctcgccgatcttcttcggggagagaccgagcgggccgatc 587
|| || || ||||||||||| || ||||| |||||||| || |||||||| || |||||
Sbjct: 211 gcagtttctttggcgatgtcttctccgattttcttcggagaaagaccgagaggtccgatt 152
Query: 588 ttggg 592
|||||
Sbjct: 151 ttggg 147
>gb|CA926831.1|CA926831 MTU6CR.P1.F10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 451
Score = 167 bits (84), Expect = 6e-040
Identities = 184/216 (85%), Gaps = 1/216 (0%)
Strand = Plus / Plus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | ||||||||| |
Sbjct: 123 tgctttatgttctttgtcttcttcctgtctctctctggctccttcaacgccttgatagcc 182
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| || ||||| ||||| ||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 183 aaagcggcggctgagggcacgacggtgaccttggcctgacggttctggacggtgagcttg 242
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc-tcgccgat 556
|||||||| |||||||||||||||||||||||||| || |||||||||||| || |||||
Sbjct: 243 acggtgacacggaggcccttccagtccttggcggtttctttggcgatgtccttctccgat 302
Query: 557 cttcttcggggagagaccgagcgggccgatcttggg 592
||||| ||||| || ||||| || ||||| |||||
Sbjct: 303 tttcttgggggaaagtccgagaggtccgattttggg 338
>gb|AI164495.1|AI164495 A062p17u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 479
Score = 165 bits (83), Expect = 3e-039
Identities = 182/215 (84%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | |||||||| ||
Sbjct: 246 tgctttatgttcttcgtcttcttcctgtctctctctggctccttcaaagccttgataacc 187
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 186 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 127
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 126 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 67
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| || || ||||| |||||
Sbjct: 66 ttcttgggagaaagaccaagtggtccgattttggg 32
>gb|BI129599.1|BI129599 G093P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 500
Score = 165 bits (83), Expect = 3e-039
Identities = 182/215 (84%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||| ||||| ||||| || ||||| | ||||||||| ||
Sbjct: 318 tgctttatgttcttcgtcttctttctgtctctctccggctccttcaacgccttgataacc 259
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 258 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 199
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 198 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 139
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| || || ||||| |||||
Sbjct: 138 ttcttgggagaaagaccaagtggtccgattttggg 104
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 213 atctcctgctgcaagtccttggggtccttcccatcgacggtgcaccc 259
|||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 483 atctcctgctgcaaatcctttggatctttcccatcgaccgtacaccc 437
>gb|BI130975.1|BI130975 G113P43Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 507
Score = 165 bits (83), Expect = 3e-039
Identities = 182/215 (84%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | |||||||| ||
Sbjct: 315 tgctttatgttcttcgtcttcttcctgtctctctctggctccttcaaagccttgataacc 256
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 255 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 196
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 195 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 136
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| || || ||||| |||||
Sbjct: 135 ttcttgggagaaagaccaagtggtccgattttggg 101
>gb|BU824344.1|BU824344 UB63CPC09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 443
Score = 165 bits (83), Expect = 3e-039
Identities = 182/215 (84%)
Strand = Plus / Minus
Query: 378 tgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttgatgacg 437
||||| |||||||| |||||||||||| ||||| || ||||| | |||||||| ||
Sbjct: 353 tgctttatgttcttcgtcttcttcctgtctctctctggctccttcaaagccttgataacc 294
Query: 438 agcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtgagcttg 497
| ||||| || ||||| ||||||| ||||||||| || |||||||| ||||||||||||
Sbjct: 293 aaagccgctgctgagggcacgacggtgaccttggcttgacggttctggacggtgagcttg 234
Query: 498 acggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcgccgatc 557
|||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 233 acggtgacacggaggcccttccagtccttggctgtctccttggcgatgtcttcaccgatt 174
Query: 558 ttcttcggggagagaccgagcgggccgatcttggg 592
||||| || || ||||| || || ||||| |||||
Sbjct: 173 ttcttgggagaaagaccaagtggtccgattttggg 139
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 53,874
Number of Sequences: 369679
Number of extensions: 53874
Number of successful extensions: 16552
Number of sequences better than 0.5: 127
Number of HSP's better than 0.5 without gapping: 126
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16326
Number of HSP's gapped (non-prelim): 214
length of query: 634
length of database: 203,408,664
effective HSP length: 19
effective length of query: 615
effective length of database: 196,384,763
effective search space: 120776629245
effective search space used: 120776629245
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)