BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738959.2.3
(725 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF229028.1|CF229028 PtaXM0020C6C0606 Poplar cDNA library... 58 5e-007
gb|CB240410.1|CB240410 PopSC00391 Poplar SC cDNA library Po... 56 2e-006
gb|CF231485.1|CF231485 PtaC0022A3A0301 Poplar cDNA library ... 56 2e-006
gb|CV240612.1|CV240612 WS0251.B21_N21 PT-MB-N-A-15 Populus ... 56 2e-006
gb|CX168862.1|CX168862 D09_69-79_07.ab1 leaf inoculated wit... 56 2e-006
gb|CX186838.1|CX186838 A07_45-65_01.ab1 leaf inoculated wit... 56 2e-006
gb|DT476800.1|DT476800 WS01230.B21_O03 PT-GT-FL-A-3 Populus... 56 2e-006
gb|DT477098.1|DT477098 WS01231.B21_P09 PT-GT-FL-A-3 Populus... 56 2e-006
gb|DT482850.1|DT482850 WS02520.B21_P08 PT-MB-N-A-15 Populus... 56 2e-006
gb|DT487763.1|DT487763 WS02534.B21_J13 PT-MB-N-A-15 Populus... 56 2e-006
gb|DT491711.1|DT491711 WS02548.C21_I24 PT-MB-N-A-15 Populus... 56 2e-006
gb|CV267981.1|CV267981 WS0204.B21_D17 PTxN-IB-N-A-11 Populu... 54 8e-006
gb|DT492508.1|DT492508 WS02550.C21_O21 PT-MB-N-A-15 Populus... 54 8e-006
gb|AJ772039.1|AJ772039 AJ772039 Populus euphratica root 3-6... 52 3e-005
gb|AI163474.1|AI163474 A042p49u Hybrid aspen plasmid librar... 50 1e-004
gb|BU872827.1|BU872827 Q047D09 Populus flower cDNA library ... 50 1e-004
gb|BU896113.1|BU896113 X035G02 Populus wood cDNA library Po... 50 1e-004
gb|CF234128.1|CF234128 PtaJXO2H11H1115 Poplar cDNA library ... 50 1e-004
gb|CF234258.1|CF234258 PtaJXO4D2D0208 Poplar cDNA library f... 50 1e-004
gb|CN520650.1|CN520650 GQ0108.B3_J18 GQ010 Populus trichoca... 50 1e-004
gb|CN521035.1|CN521035 GQ0105.B3_B09 GQ010 Populus trichoca... 50 1e-004
gb|CN549606.1|CN549606 GQ0242.B3_P07 GQ024 Populus trichoca... 50 1e-004
gb|CK318368.1|CK318368 B9P08e03 Populus stem seasonal libra... 50 1e-004
gb|AJ774119.1|AJ774119 AJ774119 Populus euphratica shoot 3-... 50 1e-004
gb|CV130512.1|CV130512 X9P09a03 Populus stem seasonal libra... 50 1e-004
gb|CV227544.1|CV227544 WS0167.B21_H19 PT-DX-A-7 Populus tri... 50 1e-004
gb|CV228312.1|CV228312 WS0191.B21_L04 PT-DX-N-A-10 Populus ... 50 1e-004
gb|CV230168.1|CV230168 WS01915.B21_K06 PT-DX-N-A-10 Populus... 50 1e-004
gb|CV230285.1|CV230285 WS01916.B21_A07 PT-DX-N-A-10 Populus... 50 1e-004
gb|CV232800.1|CV232800 WS0198.B21_L10 PT-DX-N-A-10 Populus ... 50 1e-004
gb|CV235666.1|CV235666 WS01221.B21_B12 PT-GT-FL-A-3 Populus... 50 1e-004
gb|CV236976.1|CV236976 WS01226.B21.1_C07 PT-GT-FL-A-3 Popul... 50 1e-004
gb|CV238664.1|CV238664 WS0127.B21.1_I17 PT-GT-FL-A-3 Populu... 50 1e-004
gb|CV238832.1|CV238832 WS0128.B21.1_E01 PT-GT-FL-A-3 Populu... 50 1e-004
gb|CV244675.1|CV244675 WS0255.B21_E22 PT-MB-N-A-15 Populus ... 50 1e-004
gb|CV246898.1|CV246898 WS01116.B21_F08 PT-P-FL-A-2 Populus ... 50 1e-004
gb|CV246902.1|CV246902 WS01116.B21_F15 PT-P-FL-A-2 Populus ... 50 1e-004
gb|CV248085.1|CV248085 WS0112.B21_G03 PT-P-FL-A-2 Populus t... 50 1e-004
gb|CV249280.1|CV249280 WS01123.B21_J21 PT-P-FL-A-2 Populus ... 50 1e-004
gb|CV252609.1|CV252609 PX0015.B21_G13 PT-X-FL-A-1 Populus t... 50 1e-004
gb|CV252768.1|CV252768 PX0015.B21_O15 PT-X-FL-A-1 Populus t... 50 1e-004
gb|CV259441.1|CV259441 WS02011.B21_F23 PTxN-IB-N-A-11 Popul... 50 1e-004
gb|CV263569.1|CV263569 WS02022.B21_D08 PTxN-IB-N-A-11 Popul... 50 1e-004
gb|CV263866.1|CV263866 WS02022.B21_P22 PTxN-IB-N-A-11 Popul... 50 1e-004
gb|CV264510.1|CV264510 WS02024.B21_L13 PTxN-IB-N-A-11 Popul... 50 1e-004
gb|CV268997.1|CV268997 WS0207.B21_A20 PTxN-IB-N-A-11 Populu... 50 1e-004
gb|CX168005.1|CX168005 B08_69-111_04.ab1 leaf inoculated wi... 50 1e-004
gb|CX654901.1|CX654901 PO01002E09 Poplar SC cDNA library Po... 50 1e-004
gb|DT472425.1|DT472425 WS01226.BR.1_J07 PT-GT-FL-A-3 Populu... 50 1e-004
gb|DT472504.1|DT472504 WS01226.BR_C07 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT473029.1|DT473029 WS01228.BR_F15 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT473105.1|DT473105 WS01228.BR_J10 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT473360.1|DT473360 WS01229.BR_G21 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT473469.1|DT473469 WS01229.BR_L20 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT474122.1|DT474122 WS01230.BR_O03 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT474143.1|DT474143 WS01230.BR_P10 PT-GT-FL-A-3 Populus ... 50 1e-004
gb|DT476114.1|DT476114 WS01228.B21_F15 PT-GT-FL-A-3 Populus... 50 1e-004
gb|DT476172.1|DT476172 WS01228.B21_J10 PT-GT-FL-A-3 Populus... 50 1e-004
gb|DT476479.1|DT476479 WS01229.B21_L20 PT-GT-FL-A-3 Populus... 50 1e-004
gb|DT476820.1|DT476820 WS01230.B21_P10 PT-GT-FL-A-3 Populus... 50 1e-004
gb|DT477775.1|DT477775 WS02520.BR_P08 PT-MB-N-A-15 Populus ... 50 1e-004
gb|DT478055.1|DT478055 WS02521.BR_L16 PT-MB-N-A-15 Populus ... 50 1e-004
gb|DT483124.1|DT483124 WS02521.B21_L16 PT-MB-N-A-15 Populus... 50 1e-004
gb|DT486526.1|DT486526 WS02531.B21_D18 PT-MB-N-A-15 Populus... 50 1e-004
gb|DT492785.1|DT492785 WS02552.C21_F09 PT-MB-N-A-15 Populus... 50 1e-004
gb|DT496508.1|DT496508 WS01123.BR_J21 PT-P-FL-A-2 Populus t... 50 1e-004
gb|DT500413.1|DT500413 PX0015.BR_G13 PT-X-FL-A-1 Populus tr... 50 1e-004
gb|DT507862.1|DT507862 WS02419.BR_G18 PTxD-ICC-N-A-14 Popul... 50 1e-004
gb|DT508589.1|DT508589 WS02421.BR_G08 PTxD-ICC-N-A-14 Popul... 50 1e-004
gb|DT511072.1|DT511072 WS02429.BR_H16 PTxD-ICC-N-A-14 Popul... 50 1e-004
gb|DT512490.1|DT512490 WS02419.B21_G18 PTxD-ICC-N-A-14 Popu... 50 1e-004
gb|DT513197.1|DT513197 WS02421.B21_G08 PTxD-ICC-N-A-14 Popu... 50 1e-004
gb|DT515772.1|DT515772 WS02429.B21.1_H16 PTxD-ICC-N-A-14 Po... 50 1e-004
gb|DT523671.1|DT523671 WS02040.B21_F05 PTxN-IB-N-A-11 Popul... 50 1e-004
gb|DT524335.1|DT524335 WS02042.C21.1_F16 PTxN-IB-N-A-11 Pop... 50 1e-004
gb|BI129711.1|BI129711 G094P70Y Populus cambium cDNA librar... 48 5e-004
gb|CX182512.1|CX182512 H09_45-121_15.ab1 leaf inoculated wi... 48 5e-004
gb|CX653431.1|CX653431 PO02001G11 Poplar SC cDNA library Po... 48 5e-004
gb|CF236881.1|CF236881 PtaJXT8D11D1107 Poplar cDNA library ... 46 0.002
gb|CK099674.1|CK099674 A080P20.5pR Hybrid aspen plasmid lib... 46 0.002
gb|AJ774750.1|AJ774750 AJ774750 Populus euphratica shoot 3-... 46 0.002
gb|CV236027.1|CV236027 WS01222.B21_I17 PT-GT-FL-A-3 Populus... 46 0.002
gb|CV264935.1|CV264935 WS02025.B21_O07 PTxN-IB-N-A-11 Popul... 46 0.002
gb|DT493749.1|DT493749 WS01116.BR_F08 PT-P-FL-A-2 Populus t... 46 0.002
gb|AI165272.1|AI165272 A080P20U Hybrid aspen plasmid librar... 44 0.007
gb|BI130649.1|BI130649 G108P73Y Populus cambium cDNA librar... 44 0.007
gb|BU825809.1|BU825809 UK113TD01 Populus apical shoot cDNA ... 44 0.007
gb|BU834862.1|BU834862 T066F04 Populus apical shoot cDNA li... 44 0.007
gb|CA928550.1|CA928550 MTU6TR.P4.A02 Aspen root cDNA Librar... 44 0.007
gb|CA928802.1|CA928802 MTU6TR.P7.A07 Aspen root cDNA Librar... 44 0.007
gb|CF232400.1|CF232400 PtaJXO0010A5H0816 Poplar cDNA librar... 44 0.007
gb|CN549824.1|CN549824 GQ0244.B3_B01 GQ024 Populus trichoca... 44 0.007
gb|BU862387.1|BU862387 S015A11 Populus imbibed seed cDNA li... 42 0.029
gb|CN522526.1|CN522526 GQ0121.B3_F24 GQ012 Populus trichoca... 42 0.029
gb|BI137576.1|BI137576 F088P66Y Populus flower cDNA library... 40 0.11
gb|BI137782.1|BI137782 F093P42Y Populus flower cDNA library... 40 0.11
gb|CK098211.1|CK098211 A007P62.5pR Hybrid aspen plasmid lib... 40 0.11
gb|CV251224.1|CV251224 WS0116.B21_E05 PT-P-FL-A-2 Populus t... 40 0.11
gb|CV277427.1|CV277427 WS0143.B21_I24 PTxD-IL-A-5 Populus t... 40 0.11
gb|DT476310.1|DT476310 WS01229.B21_B21 PT-GT-FL-A-3 Populus... 40 0.11
gb|DT481214.1|DT481214 WS02531.BR_D18 PT-MB-N-A-15 Populus ... 40 0.11
gb|DT487290.1|DT487290 WS02533.B21_E19 PT-MB-N-A-15 Populus... 40 0.11
gb|DT492733.1|DT492733 WS02552.C21_C13 PT-MB-N-A-15 Populus... 40 0.11
gb|DT493756.1|DT493756 WS01116.BR_F15 PT-P-FL-A-2 Populus t... 40 0.11
gb|DT519855.1|DT519855 WS02443.B21_N22 PTxD-ICC-N-A-14 Popu... 40 0.11
gb|CA821665.1|CA821665 RSH05H07 two-month-old roots from cl... 38 0.45
gb|CV227601.1|CV227601 WS0167.B21_K12 PT-DX-A-7 Populus tri... 38 0.45
gb|CV252428.1|CV252428 PX0011.B21_L11 PT-X-FL-A-1 Populus t... 38 0.45
>gb|CF229028.1|CF229028 PtaXM0020C6C0606 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 680
Score = 58.0 bits (29), Expect = 5e-007
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||||||||||| ||||| |||||
Sbjct: 36 caacacttatggacccagaatgaacattgatgatggccgtgttgtcagcaatttcat 92
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 235 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 290
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 313 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 359
>gb|CB240410.1|CB240410 PopSC00391 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00391, mRNA sequence
Length = 478
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 307 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 362
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 385 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 431
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 108 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 164
>gb|CF231485.1|CF231485 PtaC0022A3A0301 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 694
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 473 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 528
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 551 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 597
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 274 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 330
>gb|CV240612.1|CV240612 WS0251.B21_N21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_N21 3', mRNA sequence
Length = 847
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 453 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 398
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 375 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 329
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 652 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 596
>gb|CX168862.1|CX168862 D09_69-79_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 679
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 444 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 389
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 366 gagaacacgccagatgatcctcgccagaggaagccagacatcacaaa 320
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 643 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 587
>gb|CX186838.1|CX186838 A07_45-65_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 687
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 535 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 480
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 457 gagaacacgccagatgatcctcgccagaggaagccagacatcacaaa 411
>gb|DT476800.1|DT476800 WS01230.B21_O03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_O03 3', mRNA sequence
Length = 920
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 358 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 303
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 280 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 234
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 557 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 501
>gb|DT477098.1|DT477098 WS01231.B21_P09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_P09 3', mRNA sequence
Length = 963
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 530 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 475
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 452 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 406
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 729 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 673
>gb|DT482850.1|DT482850 WS02520.B21_P08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_P08 3', mRNA sequence
Length = 800
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 449 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 394
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 371 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 325
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 648 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 592
>gb|DT487763.1|DT487763 WS02534.B21_J13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02534_J13 3', mRNA sequence
Length = 807
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 332 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 277
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 254 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 208
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 531 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 475
>gb|DT491711.1|DT491711 WS02548.C21_I24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02548_I24 3', mRNA sequence
Length = 525
Score = 56.0 bits (28), Expect = 2e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 460 ccaggtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 405
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 382 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 336
>gb|CV267981.1|CV267981 WS0204.B21_D17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_D17 3', mRNA sequence
Length = 373
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 373 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 327
>gb|DT492508.1|DT492508 WS02550.C21_O21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_O21 3', mRNA sequence
Length = 808
Score = 54.0 bits (27), Expect = 8e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || |||||||||||||| |||||||||||
Sbjct: 282 gagaacacaccagatgatcctcgccagaggaagccagacatcacaaa 236
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 559 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 503
Score = 48.1 bits (24), Expect = 5e-004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 206 gtgaattcaccatgctggaacttgctgagaatgtgaaggagttgatcaaccc 257
|||||||||||||| |||| ||||| |||| ||| |||||| | ||||||||
Sbjct: 356 gtgaattcaccatgatggagcttgcggagactgttaaggagcttatcaaccc 305
>gb|AJ772039.1|AJ772039 AJ772039 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600014G07F1, mRNA sequence
Length = 348
Score = 52.0 bits (26), Expect = 3e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 20 atgaacattgatgatggccgtgttgctagcaacttcat 57
||||||||||||||||| ||||||| |||||||||||
Sbjct: 164 atgaacattgatgatggtcgtgttgtcagcaacttcat 201
>gb|AI163474.1|AI163474 A042p49u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 385
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 163 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 219
>gb|BU872827.1|BU872827 Q047D09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 317
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 124 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 180
>gb|BU896113.1|BU896113 X035G02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 764
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 679 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 735
>gb|CF234128.1|CF234128 PtaJXO2H11H1115 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 653
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 233 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 289
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 510 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 556
Score = 42.1 bits (21), Expect = 0.029
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||| ||| ||||||
Sbjct: 432 ccaggtgaattcaccatgatcgagcttgcggagactgttaaggag 476
>gb|CF234258.1|CF234258 PtaJXO4D2D0208 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 709
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 121 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 177
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 398 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 444
Score = 42.1 bits (21), Expect = 0.029
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||| ||| ||||||
Sbjct: 320 ccaggtgaattcaccatgatcgagcttgcggagactgttaaggag 364
>gb|CN520650.1|CN520650 GQ0108.B3_J18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_J18 5', mRNA sequence
Length = 814
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 665 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 721
>gb|CN521035.1|CN521035 GQ0105.B3_B09 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_B09 5', mRNA sequence
Length = 835
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 670 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 726
>gb|CN549606.1|CN549606 GQ0242.B3_P07 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_P07 5', mRNA sequence
Length = 689
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 371 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 427
>gb|CK318368.1|CK318368 B9P08e03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 679
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 226 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 270
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 27 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 83
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 304 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 350
>gb|AJ774119.1|AJ774119 AJ774119 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300008G12F1, mRNA sequence
Length = 644
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 155 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 211
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 432 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 478
Score = 42.1 bits (21), Expect = 0.029
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||| ||| ||||||
Sbjct: 354 ccaggtgaattcaccatgatcgagcttgcagagactgtcaaggag 398
>gb|CV130512.1|CV130512 X9P09a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 796
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 283 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 339
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 560 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 606
Score = 42.1 bits (21), Expect = 0.029
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||| | ||||||
Sbjct: 482 ccaggtgaattcaccatgatcgagcttgcggagaatattaaggag 526
>gb|CV227544.1|CV227544 WS0167.B21_H19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_H19
3', mRNA sequence
Length = 927
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 462 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 506
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 263 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 319
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 540 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 586
>gb|CV228312.1|CV228312 WS0191.B21_L04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0191_L04 3', mRNA sequence
Length = 545
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 75 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 119
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 153 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 199
>gb|CV230168.1|CV230168 WS01915.B21_K06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_K06 3', mRNA sequence
Length = 764
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 671 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 615
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 472 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 428
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 394 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 348
>gb|CV230285.1|CV230285 WS01916.B21_A07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_A07 3', mRNA sequence
Length = 709
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 658 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 602
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 459 ccaggtgaattcaccatgatcgagcttgcagagaatgtcaaggag 415
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 381 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 335
>gb|CV232800.1|CV232800 WS0198.B21_L10 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_L10 3', mRNA sequence
Length = 719
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 667 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 611
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 468 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 424
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 390 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 344
>gb|CV235666.1|CV235666 WS01221.B21_B12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_B12 3', mRNA sequence
Length = 549
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 483 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 439
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 405 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 359
>gb|CV236976.1|CV236976 WS01226.B21.1_C07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_C07 3', mRNA sequence
Length = 897
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 674 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 618
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 475 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 431
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 397 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 351
>gb|CV238664.1|CV238664 WS0127.B21.1_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_I17 3', mRNA sequence
Length = 749
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 666 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 610
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 467 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 423
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 389 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 343
>gb|CV238832.1|CV238832 WS0128.B21.1_E01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_E01 3', mRNA sequence
Length = 639
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 467 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 423
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 389 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 343
>gb|CV244675.1|CV244675 WS0255.B21_E22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0255_E22 3', mRNA sequence
Length = 817
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 670 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 614
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 471 ccaggtgaattcaccatgatcgagcttgcagagaatgtcaaggag 427
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 393 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 347
>gb|CV246898.1|CV246898 WS01116.B21_F08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_F08 3', mRNA sequence
Length = 697
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 675 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 619
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 476 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 432
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 398 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 352
>gb|CV246902.1|CV246902 WS01116.B21_F15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_F15 3', mRNA sequence
Length = 700
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 674 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 618
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 475 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 431
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 397 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 351
>gb|CV248085.1|CV248085 WS0112.B21_G03 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0112_G03 3', mRNA sequence
Length = 753
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 670 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 614
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 471 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 427
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 393 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 347
>gb|CV249280.1|CV249280 WS01123.B21_J21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_J21 3', mRNA sequence
Length = 728
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 671 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 615
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 472 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 428
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 394 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 348
>gb|CV252609.1|CV252609 PX0015.B21_G13 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0015_G13 3', mRNA sequence
Length = 653
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 470 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 426
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 392 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 346
Score = 44.1 bits (22), Expect = 0.007
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 20 atgaacattgatgatggccgtgttgctagcaacttcat 57
||||||||||||||||| ||||||| ||||| |||||
Sbjct: 650 atgaacattgatgatggtcgtgttgtcagcaatttcat 613
>gb|CV252768.1|CV252768 PX0015.B21_O15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0015_O15 3', mRNA sequence
Length = 486
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 471 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 427
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 393 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 347
>gb|CV259441.1|CV259441 WS02011.B21_F23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_F23 3', mRNA sequence
Length = 777
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 675 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 619
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 476 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 432
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 398 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 352
>gb|CV263569.1|CV263569 WS02022.B21_D08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_D08 3', mRNA sequence
Length = 611
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 487 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 443
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 409 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 363
>gb|CV263866.1|CV263866 WS02022.B21_P22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_P22 3', mRNA sequence
Length = 631
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 380 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 336
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 302 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 256
>gb|CV264510.1|CV264510 WS02024.B21_L13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02024_L13 3', mRNA sequence
Length = 897
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 659 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 603
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 460 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 416
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 382 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 336
>gb|CV268997.1|CV268997 WS0207.B21_A20 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_A20 3', mRNA sequence
Length = 683
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 487 ccaggtgaattcaccatgatcgagcttgcggagaatgtcaaggag 443
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 409 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 363
Score = 44.1 bits (22), Expect = 0.007
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 20 atgaacattgatgatggccgtgttgctagcaacttcat 57
||||||||||||||||| ||||||| ||||| |||||
Sbjct: 667 atgaacattgatgatggtcgtgttgtcagcaatttcat 630
>gb|CX168005.1|CX168005 B08_69-111_04.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 700
Score = 50.1 bits (25), Expect = 1e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 202 ccaggtgaattcaccatgctggaacttgctgagaatgtgaaggag 246
|||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct: 341 ccaggtgaattcaccatgatcgagcttgcggagaatgttaaggag 385
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 142 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 198
Score = 46.1 bits (23), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 280 gagaacactcctgatgacccccgccagaggaagccggacatcacaaa 326
|||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 419 gagaacacaccagatgatcctcgtcagaggaagccagacatcacaaa 465
>gb|CX654901.1|CX654901 PO01002E09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01002E09 5', mRNA sequence
Length = 333
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 118 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 174
>gb|DT472425.1|DT472425 WS01226.BR.1_J07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_J07 5', mRNA sequence
Length = 903
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 678 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 734
>gb|DT472504.1|DT472504 WS01226.BR_C07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_C07 5', mRNA sequence
Length = 870
Score = 50.1 bits (25), Expect = 1e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1 caacacctatgggcctaggatgaacattgatgatggccgtgttgctagcaacttcat 57
|||||| ||||| || || ||||||||||||||||| ||||||| ||||| |||||
Sbjct: 709 caacacttatggacccagaatgaacattgatgatggtcgtgttgtcagcaatttcat 765
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 78,154
Number of Sequences: 369679
Number of extensions: 78154
Number of successful extensions: 20098
Number of sequences better than 0.5: 108
Number of HSP's better than 0.5 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19685
Number of HSP's gapped (non-prelim): 413
length of query: 725
length of database: 203,408,664
effective HSP length: 19
effective length of query: 706
effective length of database: 196,384,763
effective search space: 138647642678
effective search space used: 138647642678
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)