BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF230138.1|CF230138 PtaC0004C5C0505 Poplar cDNA library ... 127 6e-028
gb|CV275930.1|CV275930 WS0178.B21.1_B13 PTxD-NR-A-8 Populus... 127 6e-028
gb|CV283222.1|CV283222 WS0186.B21_M03 PTxD-IL-N-A-9 Populus... 127 6e-028
gb|DT497560.1|DT497560 WS01126.BR_N07 PT-P-FL-A-2 Populus t... 127 6e-028
gb|CV131695.1|CV131695 L3P04b12 Populus stem seasonal libra... 121 4e-026
gb|BU813745.1|BU813745 N014E11 Populus bark cDNA library Po... 119 1e-025
gb|BU815727.1|BU815727 N045F12 Populus bark cDNA library Po... 119 1e-025
gb|BU822586.1|BU822586 UB39BPF04 Populus tremula cambium cD... 119 1e-025
gb|BU823752.1|BU823752 UB56BPB07 Populus tremula cambium cD... 119 1e-025
gb|BU826471.1|BU826471 UK121TB01 Populus apical shoot cDNA ... 119 1e-025
gb|BU863933.1|BU863933 S034C10 Populus imbibed seed cDNA li... 119 1e-025
gb|BU870921.1|BU870921 Q019H08 Populus flower cDNA library ... 119 1e-025
gb|BU874609.1|BU874609 Q069H11 Populus flower cDNA library ... 119 1e-025
gb|CK097117.1|CK097117 UB39BPF04.3pR Populus active cambium... 119 1e-025
gb|CK106934.1|CK106934 UB39BPF04.5pR Populus active cambium... 119 1e-025
gb|AJ775279.1|AJ775279 AJ775279 Populus euphratica shoot 3-... 119 1e-025
gb|CV242846.1|CV242846 WS02516.B21.1_D04 PT-MB-N-A-15 Popul... 119 1e-025
gb|CV250072.1|CV250072 WS01126.B21_E06 PT-P-FL-A-2 Populus ... 119 1e-025
gb|CV252914.1|CV252914 PX0019.B21.1_H21 PT-X-FL-A-1 Populus... 119 1e-025
gb|CV252970.1|CV252970 PX0019.B21.1_L03 PT-X-FL-A-1 Populus... 119 1e-025
gb|CV253009.1|CV253009 PX0019.B21.1_N11 PT-X-FL-A-1 Populus... 119 1e-025
gb|CV254330.1|CV254330 WS0224.B21_N16 PTxD-ICC-A-12 Populus... 119 1e-025
gb|CV260622.1|CV260622 WS02014.B21_J02 PTxN-IB-N-A-11 Popul... 119 1e-025
gb|CV262800.1|CV262800 WS0202.B21_I19 PTxN-IB-N-A-11 Populu... 119 1e-025
gb|CV282738.1|CV282738 WS0185.B21_H11 PTxD-IL-N-A-9 Populus... 119 1e-025
gb|DN484401.1|DN484401 I009P52.3pR Populus senescing leaves... 119 1e-025
gb|DN493808.1|DN493808 I009P52.5pR Populus senescing leaves... 119 1e-025
gb|DT478765.1|DT478765 WS02523.BR_L20 PT-MB-N-A-15 Populus ... 119 1e-025
gb|DT483847.1|DT483847 WS02523.B21_L20 PT-MB-N-A-15 Populus... 119 1e-025
gb|DT489965.1|DT489965 WS02543.B21_K18 PT-MB-N-A-15 Populus... 119 1e-025
gb|DT497366.1|DT497366 WS01126.BR_E06 PT-P-FL-A-2 Populus t... 119 1e-025
gb|DT500671.1|DT500671 PX0019.BR.1_H21 PT-X-FL-A-1 Populus ... 119 1e-025
gb|DT500891.1|DT500891 PX0019.BR_L03 PT-X-FL-A-1 Populus tr... 119 1e-025
gb|DT500926.1|DT500926 PX0019.BR_N11 PT-X-FL-A-1 Populus tr... 119 1e-025
gb|DT515395.1|DT515395 WS02427.B21_H04 PTxD-ICC-N-A-14 Popu... 119 1e-025
gb|AJ780036.1|AJ780036 AJ780036 Populus euphratica root 3-6... 115 2e-024
gb|CV250218.1|CV250218 WS01126.B21_N07 PT-P-FL-A-2 Populus ... 113 9e-024
gb|BU824716.1|BU824716 UB68DPB04 Populus tremula cambium cD... 111 4e-023
gb|BU828149.1|BU828149 K017P33P Populus apical shoot cDNA l... 111 4e-023
gb|BU866729.1|BU866729 S070A12 Populus imbibed seed cDNA li... 111 4e-023
gb|BU891920.1|BU891920 P057B03 Populus petioles cDNA librar... 111 4e-023
gb|CV241085.1|CV241085 WS02511.B21_C21 PT-MB-N-A-15 Populus... 111 4e-023
gb|CX657485.1|CX657485 PO02048B06 Poplar SC cDNA library Po... 111 4e-023
gb|BU817057.1|BU817057 UA12BPE04 Populus tremula cambium cD... 105 2e-021
gb|BU828772.1|BU828772 K028P48P Populus apical shoot cDNA l... 103 9e-021
gb|BU834377.1|BU834377 T060D03 Populus apical shoot cDNA li... 103 9e-021
gb|BU834761.1|BU834761 T065D03 Populus apical shoot cDNA li... 103 9e-021
gb|CK116521.1|CK116521 B013P31 Hybrid aspen plasmid library... 103 9e-021
gb|BU837098.1|BU837098 T094F04 Populus apical shoot cDNA li... 101 3e-020
gb|BU878440.1|BU878440 V047C04 Populus flower cDNA library ... 96 2e-018
gb|CV242394.1|CV242394 WS02514.B21.1_P02 PT-MB-N-A-15 Popul... 96 2e-018
gb|BU830907.1|BU830907 T014F04 Populus apical shoot cDNA li... 70 1e-010
gb|CV248326.1|CV248326 WS01120.B21_E20 PT-P-FL-A-2 Populus ... 68 5e-010
gb|BU833058.1|BU833058 T041C12 Populus apical shoot cDNA li... 54 7e-006
gb|BU861578.1|BU861578 S003H08 Populus imbibed seed cDNA li... 52 3e-005
gb|BU822445.1|BU822445 UB37DPG08 Populus tremula cambium cD... 42 0.027
>gb|CF230138.1|CF230138 PtaC0004C5C0505 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 635
Score = 127 bits (64), Expect = 6e-028
Identities = 205/252 (81%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 407 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 348
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 347 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 288
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
|||||||| || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 287 tcgatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 228
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 227 ctgggtattatttttgacactcatcatcagaacagagagcggcccggtgctgaattcctc 168
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 167 ctcctcattctt 156
>gb|CV275930.1|CV275930 WS0178.B21.1_B13 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_B13 3', mRNA sequence
Length = 603
Score = 127 bits (64), Expect = 6e-028
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 223 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 282
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 283 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 342
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
|||||||| || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 343 tcgatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 402
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 403 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 462
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 463 ctcctcattctt 474
>gb|CV283222.1|CV283222 WS0186.B21_M03 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_M03 3', mRNA sequence
Length = 662
Score = 127 bits (64), Expect = 6e-028
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 265 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 324
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 325 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 384
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
|||||||| || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 385 tcgatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 444
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 445 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 504
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 505 ctcctcattctt 516
>gb|DT497560.1|DT497560 WS01126.BR_N07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_N07 5', mRNA sequence
Length = 695
Score = 127 bits (64), Expect = 6e-028
Identities = 205/252 (81%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 384 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 325
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 324 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 265
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
|||||||| || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 264 tcgatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 205
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 204 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 145
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 144 ctcctcattctt 133
>gb|CV131695.1|CV131695 L3P04b12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 607
Score = 121 bits (61), Expect = 4e-026
Identities = 208/257 (80%)
Strand = Plus / Minus
Query: 329 cccctgaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttg 388
|||| ||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| |||
Sbjct: 439 ccccggaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttg 380
Query: 389 cccttgccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgtta 448
|| || ||||| || || ||||| ||||||||||||| || || || || ||||||||
Sbjct: 379 cctttcccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttg 320
Query: 449 cagtggcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatg 508
|| || ||||| || || | || || ||||| |||||||||||||||||||| || ||
Sbjct: 319 caatgtcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaatt 260
Query: 509 agaacctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaat 568
|| |||||||| || || || ||||||||||| || || || || || || ||||| |||
Sbjct: 259 agtacctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaat 200
Query: 569 tcctcttcctctttctt 585
||||| ||||| |||||
Sbjct: 199 tcctcctcctcattctt 183
>gb|BU813745.1|BU813745 N014E11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 615
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 391 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 332
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 331 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 272
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 271 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 212
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 211 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 152
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 151 ctcctcattctt 140
>gb|BU815727.1|BU815727 N045F12 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 550
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 392 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 333
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 332 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 273
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 272 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 213
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 212 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 153
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 152 ctcctcattctt 141
>gb|BU822586.1|BU822586 UB39BPF04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 477
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 409 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 350
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 349 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 290
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 289 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 230
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 229 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 170
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 169 ctcctcattctt 158
>gb|BU823752.1|BU823752 UB56BPB07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 479
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 408 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 349
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 348 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 289
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 288 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 229
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 228 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 169
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 168 ctcctcattctt 157
>gb|BU826471.1|BU826471 UK121TB01 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 598
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 409 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 350
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 349 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 290
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 289 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 230
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 229 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 170
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 169 ctcctcattctt 158
>gb|BU863933.1|BU863933 S034C10 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 551
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 417 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 358
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 357 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 298
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 297 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 238
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 237 ctgggtattatttttgacactcatcatcaggacagagagcggcccagtgctgaattcctc 178
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 177 ctcctcattctt 166
>gb|BU870921.1|BU870921 Q019H08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 612
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 407 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 348
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 347 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 288
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 287 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 228
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 227 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 168
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 167 ctcctcattctt 156
>gb|BU874609.1|BU874609 Q069H11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 649
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 421 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 362
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 361 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 302
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 301 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 242
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 241 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 182
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 181 ctcctcattctt 170
>gb|CK097117.1|CK097117 UB39BPF04.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB39BPF04 3', mRNA sequence
Length = 550
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 141 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 200
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 201 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 260
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 261 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 320
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 321 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 380
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 381 ctcctcattctt 392
>gb|CK106934.1|CK106934 UB39BPF04.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB39BPF04 5', mRNA sequence
Length = 481
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 411 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 352
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 351 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 292
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 291 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 232
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 231 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 172
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 171 ctcctcattctt 160
>gb|AJ775279.1|AJ775279 AJ775279 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030E02F1, mRNA sequence
Length = 466
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 370 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 311
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 310 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 251
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 250 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 191
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 190 ctgggtattatttttgacactcatcatcagaacagaaagcggcccagtgctgaattcctc 131
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 130 ctcctcattctt 119
>gb|CV242846.1|CV242846 WS02516.B21.1_D04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_D04 3', mRNA sequence
Length = 635
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 269 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 328
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 329 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 388
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 389 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 448
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 449 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 508
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 509 ctcctcattctt 520
>gb|CV250072.1|CV250072 WS01126.B21_E06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_E06 3', mRNA sequence
Length = 542
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 193 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 252
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 253 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 312
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 313 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 372
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 373 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 432
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 433 ctcctcattctt 444
>gb|CV252914.1|CV252914 PX0019.B21.1_H21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H21 3', mRNA sequence
Length = 606
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 264 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 323
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 324 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 383
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 384 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 443
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 444 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 503
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 504 ctcctcattctt 515
>gb|CV252970.1|CV252970 PX0019.B21.1_L03 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L03 3', mRNA sequence
Length = 639
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 264 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 323
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 324 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 383
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 384 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 443
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 444 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 503
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 504 ctcctcattctt 515
>gb|CV253009.1|CV253009 PX0019.B21.1_N11 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_N11 3', mRNA sequence
Length = 639
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 264 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 323
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 324 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 383
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 384 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 443
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 444 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 503
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 504 ctcctcattctt 515
>gb|CV254330.1|CV254330 WS0224.B21_N16 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_N16 3', mRNA sequence
Length = 677
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 266 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 325
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 326 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 385
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 386 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 445
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 446 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 505
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 506 ctcctcattctt 517
>gb|CV260622.1|CV260622 WS02014.B21_J02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02014_J02 3', mRNA sequence
Length = 598
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 223 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 282
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 283 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 342
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 343 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 402
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 403 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 462
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 463 ctcctcattctt 474
>gb|CV262800.1|CV262800 WS0202.B21_I19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_I19 3', mRNA sequence
Length = 634
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 238 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 297
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 298 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 357
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 358 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 417
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 418 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 477
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 478 ctcctcattctt 489
>gb|CV282738.1|CV282738 WS0185.B21_H11 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_H11 3', mRNA sequence
Length = 586
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 211 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 270
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 271 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 330
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 331 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 390
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 391 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 450
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 451 ctcctcattctt 462
>gb|DN484401.1|DN484401 I009P52.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I009P52 3', mRNA sequence
Length = 594
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 307 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 366
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 367 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 426
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 427 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 486
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 487 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 546
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 547 ctcctcattctt 558
>gb|DN493808.1|DN493808 I009P52.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I009P52 5', mRNA sequence
Length = 745
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 427 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 368
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 367 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 308
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 307 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 248
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 247 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 188
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 187 ctcctcattctt 176
>gb|DT478765.1|DT478765 WS02523.BR_L20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_L20 5', mRNA sequence
Length = 610
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 373 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 314
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 313 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 254
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 253 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 194
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 193 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 134
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 133 ctcctcattctt 122
>gb|DT483847.1|DT483847 WS02523.B21_L20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_L20 3', mRNA sequence
Length = 610
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 238 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 297
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 298 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 357
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 358 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 417
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 418 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 477
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 478 ctcctcattctt 489
>gb|DT489965.1|DT489965 WS02543.B21_K18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_K18 3', mRNA sequence
Length = 628
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 259 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 318
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 319 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 378
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 379 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 438
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 439 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 498
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 499 ctcctcattctt 510
>gb|DT497366.1|DT497366 WS01126.BR_E06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_E06 5', mRNA sequence
Length = 574
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 384 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 325
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 324 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 265
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 264 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 205
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 204 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 145
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 144 ctcctcattctt 133
>gb|DT500671.1|DT500671 PX0019.BR.1_H21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H21 5', mRNA sequence
Length = 642
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 390 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 331
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 330 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 271
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 270 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 211
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 210 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 151
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 150 ctcctcattctt 139
>gb|DT500891.1|DT500891 PX0019.BR_L03 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_L03
5', mRNA sequence
Length = 553
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 390 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 331
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 330 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 271
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 270 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 211
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 210 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 151
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 150 ctcctcattctt 139
>gb|DT500926.1|DT500926 PX0019.BR_N11 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_N11
5', mRNA sequence
Length = 595
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 390 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 331
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 330 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 271
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 270 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 211
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 210 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 151
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 150 ctcctcattctt 139
>gb|DT515395.1|DT515395 WS02427.B21_H04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_H04 3', mRNA sequence
Length = 743
Score = 119 bits (60), Expect = 1e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 341 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 400
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 401 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 460
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 461 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 520
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 521 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 580
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 581 ctcctcattctt 592
>gb|AJ780036.1|AJ780036 AJ780036 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800011A06F1, mRNA sequence
Length = 578
Score = 115 bits (58), Expect = 2e-024
Identities = 202/250 (80%)
Strand = Plus / Minus
Query: 336 ggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttgc 395
||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| || |
Sbjct: 412 ggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgcctttcc 353
Query: 396 cagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtggc 455
|||| || || ||||| ||||||||||||| || || || || |||||||| || || |
Sbjct: 352 cagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatgtc 293
Query: 456 gatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacct 515
|||| || || | || || ||||| |||||||||||||||||||| || || || ||||
Sbjct: 292 gatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtacct 233
Query: 516 gggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctctt 575
|||| || || || ||||||||||| || || || || || || ||||| |||||||| |
Sbjct: 232 gggtattatttttgacactcatcatcagaacagaaagcggcccagtgctgaattcctcct 173
Query: 576 cctctttctt 585
|||| |||||
Sbjct: 172 cctcattctt 163
>gb|CV250218.1|CV250218 WS01126.B21_N07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_N07 3', mRNA sequence
Length = 645
Score = 113 bits (57), Expect = 9e-024
Identities = 205/253 (81%), Gaps = 1/253 (0%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 312 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 371
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 372 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 431
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
|||||||| || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 432 tcgatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 491
Query: 514 ct-gggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcct 572
|| |||| || || || ||||||||||| || || || || || || ||||| |||||||
Sbjct: 492 ctggggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcct 551
Query: 573 cttcctctttctt 585
| ||||| |||||
Sbjct: 552 cctcctcattctt 564
>gb|BU824716.1|BU824716 UB68DPB04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 558
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 411 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 352
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 351 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 292
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || | || ||
Sbjct: 291 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttagttagtac 232
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 231 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 172
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 171 ctcctcattctt 160
>gb|BU828149.1|BU828149 K017P33P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 111 bits (56), Expect = 4e-023
Identities = 204/252 (80%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 392 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 333
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 332 cccagtttttggcacctcagtccacatctccc-tacattttcaagaaccatgttgcaatg 274
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 273 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 214
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 213 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 154
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 153 ctcctcattctt 142
>gb|BU866729.1|BU866729 S070A12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 625
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| | ||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 418 gaggaacatttcgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 359
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 358 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 299
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 298 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 239
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 238 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 179
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 178 ctcctcattctt 167
>gb|BU891920.1|BU891920 P057B03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 628
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 407 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 348
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||| | ||||||||||||| || || || || |||||||| || ||
Sbjct: 347 cccagtttttggcaccccagtccacatctccctaacattttcaagaaccatgttgcaatg 288
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 287 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 228
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 227 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 168
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 167 ctcctcattctt 156
>gb|CV241085.1|CV241085 WS02511.B21_C21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02511_C21 3', mRNA sequence
Length = 573
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 222 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 281
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 282 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 341
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||| ||||||| || || || ||
Sbjct: 342 tcgatcgaatgccctcacacgtccaagaagcttcttgttgctgcggcagttaattagtac 401
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 402 ctgggtattatttttgacactcatcatcagaacagagagcggtccagtgctgaattcctc 461
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 462 ctcctcattctt 473
>gb|CX657485.1|CX657485 PO02048B06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048B06 5', mRNA sequence
Length = 538
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 337 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 278
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 277 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 218
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 217 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 158
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| | || || || || || ||||| ||||||||
Sbjct: 157 ctgggtattatttttgacactcatcatcaaaacagagagcggcccagtgctgaattcctc 98
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 97 ctcctcattctt 86
>gb|BU817057.1|BU817057 UA12BPE04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 417
Score = 105 bits (53), Expect = 2e-021
Identities = 202/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 409 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 350
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 349 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 290
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| | || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 289 tcgatcgnatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 230
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
| |||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 229 ccgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 170
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 169 ctcctcattctt 158
>gb|BU828772.1|BU828772 K028P48P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 495
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 331 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 272
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| || |||||||||| || || || || |||||||| || ||
Sbjct: 271 cccagtttttggcacctcagtacacatctccctaacattttcaagaaccatgttgcaatg 212
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 211 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 152
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || | ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 151 ctgggtattatttatgacactcatcatcagaacagagagcggcccagtgctgaattcctc 92
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 91 ctcctcattctt 80
>gb|BU834377.1|BU834377 T060D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 559
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 373 gaggaacattttgctgatgaatctatctttgttgactggctgagctttcttcttgccttt 314
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || |||| ||||||||||||| | || || || |||||||| || ||
Sbjct: 313 cccagtttttggcgcctcagtccacatctccctagcattttcaagaaccatgttgcaatg 254
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 253 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 194
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 193 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 134
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 133 ctcctcattctt 122
>gb|BU834761.1|BU834761 T065D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 631
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| || ||| ||| ||||| ||||| ||
Sbjct: 408 gaggaacattttgctgatgaatctatctttgttgactggctgagttttcttcttgccttt 349
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 348 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 289
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 288 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 229
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || |||| ||||||||
Sbjct: 228 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgccgaattcctc 169
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 168 ctcctcattctt 157
>gb|CK116521.1|CK116521 B013P31 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B013P31 5', mRNA sequence
Length = 479
Score = 103 bits (52), Expect = 9e-021
Identities = 203/252 (80%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||||||||| ||||| | ||| |||| ||||| ||||| ||
Sbjct: 378 gaggaacattttgctgatgaatctatctttgttg-ctggctgagctttcttcttgccttt 320
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
||||| || || ||||| ||||||||||||| || || || || |||||||| || ||
Sbjct: 319 cccagtttttggcacctcagtccacatctccctaacattttcaagaaccatgttgcaatg 260
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
||||| || || | || || ||||| |||||||||||||||||||| || || || ||
Sbjct: 259 tcgatcgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtac 200
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 199 ctgggtattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctc 140
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 139 ctcctcattctt 128
>gb|BU837098.1|BU837098 T094F04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 480
Score = 101 bits (51), Expect = 3e-020
Identities = 198/247 (80%)
Strand = Plus / Minus
Query: 339 acatcttgctgatgaatctatccttgttcacaggcagagccttctttttgcccttgccag 398
|||| ||||||||| ||||||| ||||| || ||| |||| ||||| ||||| || ||||
Sbjct: 414 acattttgctgatggatctatctttgttgactggctgagctttcttcttgcctttcccag 355
Query: 399 tcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtggcgat 458
| || || ||||| ||||||||||||| || || || || |||||||| || || ||||
Sbjct: 354 tttttggcacctcagtccacatctccctgacattttcaagaaccatgttgcaatgtcgat 295
Query: 459 caaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaacctggg 518
| || || | || || ||||| |||||||||||||||||||| || || || |||||||
Sbjct: 294 cgaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattagtacctggg 235
Query: 519 tgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctcttcct 578
| || || || ||||||||||| || || || || || || ||||| |||||||| ||||
Sbjct: 234 tattatttttgacactcatcatcagaacagagagcggcccagtgctgaattcctcctcct 175
Query: 579 ctttctt 585
| |||||
Sbjct: 174 cattctt 168
>gb|BU878440.1|BU878440 V047C04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 613
Score = 95.6 bits (48), Expect = 2e-018
Identities = 201/252 (79%)
Strand = Plus / Minus
Query: 334 gaggaacatcttgctgatgaatctatccttgttcacaggcagagccttctttttgccctt 393
||||||||| ||||||||||| ||||| ||||| || ||| |||| ||||| ||||| ||
Sbjct: 395 gaggaacattttgctgatgaacctatctttgttgactggctgagctttcttcttgccttt 336
Query: 394 gccagtcttggggacctctgtccacatctcccgcacgttctcgagcaccatgttacagtg 453
|| || || || ||||| |||||||| |||| || ||||| || |||||||| || ||
Sbjct: 335 cccggtttttggcacctcagtccacatttccctgacattctcaagaaccatgttgcaatg 276
Query: 454 gcgatcaaaagcacgaacccggccaagcagcttcttgttgttgcggcaattgatgagaac 513
| |||||| || | || || ||||| |||||||||||||||||||| || || | ||
Sbjct: 275 tctatcaaatgccctcacacgtccaagaagcttcttgttgttgcggcagttaattaatac 216
Query: 514 ctgggtgttgttcttaacactcatcattagtactgacagagggcctgtgctaaattcctc 573
|||||| || || || ||||||||||| || || || || || || ||||| ||||||||
Sbjct: 215 ctgggtattattttttacactcatcatcagaacagagagtggcccagtgctgaattcctc 156
Query: 574 ttcctctttctt 585
||||| |||||
Sbjct: 155 ctcctcgttctt 144
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 72,568
Number of Sequences: 369679
Number of extensions: 72568
Number of successful extensions: 19490
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19383
Number of HSP's gapped (non-prelim): 61
length of query: 687
length of database: 203,408,664
effective HSP length: 19
effective length of query: 668
effective length of database: 196,384,763
effective search space: 131185021684
effective search space used: 131185021684
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)