BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.707
(919 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU881242.1|BU881242 UM60TD01 Populus flower cDNA library... 74 1e-011
gb|CA821293.1|CA821293 RSH01B03 two-month-old roots from cl... 74 1e-011
gb|CV247551.1|CV247551 WS01118.B21_I19 PT-P-FL-A-2 Populus ... 74 1e-011
gb|CV266391.1|CV266391 WS02029.B21_O08 PTxN-IB-N-A-11 Popul... 74 1e-011
gb|CV277556.1|CV277556 WS0143.B21_O15 PTxD-IL-A-5 Populus t... 74 1e-011
gb|CX177002.1|CX177002 B04_69-56_04.ab1 leaf inoculated wit... 74 1e-011
gb|DT478054.1|DT478054 WS02521.BR_L15 PT-MB-N-A-15 Populus ... 74 1e-011
gb|DT483123.1|DT483123 WS02521.B21_L15 PT-MB-N-A-15 Populus... 74 1e-011
gb|DT494481.1|DT494481 WS01118.BR.1_I19 PT-P-FL-A-2 Populus... 74 1e-011
gb|DT510310.1|DT510310 WS02426.BR_D01 PTxD-ICC-N-A-14 Popul... 74 1e-011
gb|DT514936.1|DT514936 WS02426.B21_D01 PTxD-ICC-N-A-14 Popu... 74 1e-011
gb|BU837772.1|BU837772 T105F05 Populus apical shoot cDNA li... 66 3e-009
gb|CV265723.1|CV265723 WS02028.B21_A20 PTxN-IB-N-A-11 Popul... 62 4e-008
gb|BU831077.1|BU831077 T016H08 Populus apical shoot cDNA li... 58 6e-007
gb|BU833614.1|BU833614 T050D03 Populus apical shoot cDNA li... 58 6e-007
gb|BU833931.1|BU833931 T054D10 Populus apical shoot cDNA li... 58 6e-007
gb|BU885729.1|BU885729 R035C09 Populus root cDNA library Po... 58 6e-007
gb|CX659954.1|CX659954 PO01016C07 Poplar SC cDNA library Po... 58 6e-007
gb|DN483963.1|DN483963 PSO205A01 Populus tomentiglandulosa ... 56 2e-006
gb|DN483987.1|DN483987 PSO205C01 Populus tomentiglandulosa ... 56 2e-006
gb|CA926570.1|CA926570 MTU6CR.P16.E11 Aspen root cDNA Libra... 52 4e-005
gb|CA926819.1|CA926819 MTU6CR.P1.E06 Aspen root cDNA Librar... 52 4e-005
gb|BU829368.1|BU829368 K039P33P Populus apical shoot cDNA l... 50 2e-004
gb|BU831219.1|BU831219 T019A08 Populus apical shoot cDNA li... 50 2e-004
gb|BU831320.1|BU831320 T020B07 Populus apical shoot cDNA li... 50 2e-004
gb|BU891143.1|BU891143 P046E05 Populus petioles cDNA librar... 50 2e-004
gb|CK087928.1|CK087928 A026P69.3pR Hybrid aspen plasmid lib... 50 2e-004
gb|BU815077.1|BU815077 N036H04 Populus bark cDNA library Po... 48 6e-004
gb|AI162912.1|AI162912 A026P69U Hybrid aspen plasmid librar... 46 0.002
gb|BI129166.1|BI129166 G086P76Y Populus cambium cDNA librar... 46 0.002
gb|BU831781.1|BU831781 T025F12 Populus apical shoot cDNA li... 46 0.002
gb|BU836658.1|BU836658 T089C11 Populus apical shoot cDNA li... 46 0.002
gb|CA925763.1|CA925763 MTU7TL.P5.F01 Aspen leaf cDNA Librar... 46 0.002
gb|CA927219.1|CA927219 MTU6CR.P6.D10 Aspen root cDNA Librar... 46 0.002
gb|CA927242.1|CA927242 MTU6CR.P6.F10 Aspen root cDNA Librar... 46 0.002
gb|CA927922.1|CA927922 MTU6TR.P14.F02 Aspen root cDNA Libra... 46 0.002
gb|CA928149.1|CA928149 MTU6TR.P17.C10 Aspen root cDNA Libra... 46 0.002
gb|CA928233.1|CA928233 MTU6TR.P18.C04 Aspen root cDNA Libra... 46 0.002
gb|CA928554.1|CA928554 MTU6TR.P4.A06 Aspen root cDNA Librar... 46 0.002
gb|CA928668.1|CA928668 MTU6TR.P5.D09 Aspen root cDNA Librar... 46 0.002
gb|CK117266.1|CK117266 B031P40 Hybrid aspen plasmid library... 46 0.002
gb|CX172711.1|CX172711 A02_69-122_02.ab1 leaf inoculated wi... 46 0.002
gb|CX173246.1|CX173246 B11_69-30_03.ab1 leaf inoculated wit... 46 0.002
gb|CX176307.1|CX176307 E01_69-114_09.ab1 leaf inoculated wi... 46 0.002
gb|CX177585.1|CX177585 D05_45-51_07.ab1 leaf inoculated wit... 46 0.002
gb|DT469436.1|DT469436 WS01917.C21_M05 PT-DX-N-A-10 Populus... 46 0.002
gb|DT502705.1|DT502705 WS0133.BR_O21 PTxD-IL-FL-A-4 Populus... 46 0.002
gb|CA928602.1|CA928602 MTU6TR.P4.F02 Aspen root cDNA Librar... 44 0.009
gb|CX177348.1|CX177348 B02_45-117_04.ab1 leaf inoculated wi... 44 0.009
gb|CX178752.1|CX178752 H02_45-119_16.ab1 leaf inoculated wi... 44 0.009
gb|CX180170.1|CX180170 B05_45-52_03.ab1 leaf inoculated wit... 44 0.009
gb|CF233107.1|CF233107 PtaJXO0019D4D0408 Poplar cDNA librar... 42 0.037
gb|AJ534481.1|AJ534481 AJ534481 Populus euphratica root and... 40 0.15
gb|CA933471.1|CA933471 MTU5CS.P8.E06 Aspen stem cDNA Librar... 40 0.15
gb|CF118925.1|CF118925 MTU10CS.P11.C02 Aspen stem cDNA Libr... 40 0.15
>gb|BU881242.1|BU881242 UM60TD01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 558
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 434 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 375
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 374 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 317
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 316 ggtcttggttgtagcaagaaccacagc 290
>gb|CA821293.1|CA821293 RSH01B03 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 579
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 446 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 387
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 386 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 329
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 328 ggtcttggttgtagcaagaaccacagc 302
>gb|CV247551.1|CV247551 WS01118.B21_I19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_I19 3', mRNA sequence
Length = 646
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 332 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 391
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 392 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 449
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 450 ggtcttggttgtagcaagaaccacagc 476
>gb|CV266391.1|CV266391 WS02029.B21_O08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_O08 3', mRNA sequence
Length = 720
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 424 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 365
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 364 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 307
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 306 ggtcttggttgtagcaagaaccacagc 280
>gb|CV277556.1|CV277556 WS0143.B21_O15 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_O15 3', mRNA sequence
Length = 805
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 385 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 444
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 445 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 502
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 503 ggtcttggttgtagcaagaaccacagc 529
>gb|CX177002.1|CX177002 B04_69-56_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 636
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 459 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 400
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 399 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 342
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 341 ggtcttggttgtagcaagaaccacagc 315
>gb|DT478054.1|DT478054 WS02521.BR_L15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_L15 5', mRNA sequence
Length = 452
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 256 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 315
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 316 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 373
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 374 ggtcttggttgtagcaagaaccacagc 400
>gb|DT483123.1|DT483123 WS02521.B21_L15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_L15 3', mRNA sequence
Length = 450
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 195 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 136
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 135 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 78
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 77 ggtcttggttgtagcaagaaccacagc 51
>gb|DT494481.1|DT494481 WS01118.BR.1_I19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_I19 5', mRNA sequence
Length = 770
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 437 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 378
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 377 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 320
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 319 ggtcttggttgtagcaagaaccacagc 293
>gb|DT510310.1|DT510310 WS02426.BR_D01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_D01 5', mRNA sequence
Length = 723
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 415 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 356
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 355 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 298
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 297 ggtcttggttgtagcaagaaccacagc 271
>gb|DT514936.1|DT514936 WS02426.B21_D01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_D01 3', mRNA sequence
Length = 723
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/147 (82%), Gaps = 4/147 (2%)
Strand = Plus / Plus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 309 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccatgcggc 368
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || |||| |||||| ||||||||||||
Sbjct: 369 tgaactccttcttcatgacagacttgtgaagcaaagct--gcaggtttgttctgcttctt 426
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 427 ggtcttggttgtagcaagaaccacagc 453
>gb|BU837772.1|BU837772 T105F05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 680
Score = 65.9 bits (33), Expect = 3e-009
Identities = 120/147 (81%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 442 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 383
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| |||||||||||||
Sbjct: 382 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtacgttctgcttctt 325
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 324 ggtcttggttgtagcaagaaccacagc 298
>gb|CV265723.1|CV265723 WS02028.B21_A20 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_A20 3', mRNA sequence
Length = 687
Score = 61.9 bits (31), Expect = 4e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccat 526
|||||||||||||||||| ||| || ||||||||||| |||||||||||||||
Sbjct: 408 tcagatcaggcctgtagttgttatctgcaacctggttttccacagccttggccat 354
>gb|BU831077.1|BU831077 T016H08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 58.0 bits (29), Expect = 6e-007
Identities = 119/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 245 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 186
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 185 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 128
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 127 ggtcttggttgtagcaagaaccacagc 101
>gb|BU833614.1|BU833614 T050D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 619
Score = 58.0 bits (29), Expect = 6e-007
Identities = 119/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 454 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 395
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 394 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 337
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 336 ggtcttggttgtagcaagaaccacagc 310
>gb|BU833931.1|BU833931 T054D10 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 688
Score = 58.0 bits (29), Expect = 6e-007
Identities = 119/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 371 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 312
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 311 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 254
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 253 ggtcttggttgtagcaagaaccacagc 227
>gb|BU885729.1|BU885729 R035C09 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 607
Score = 58.0 bits (29), Expect = 6e-007
Identities = 119/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 439 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 380
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 379 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 322
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 321 ggtcttggttgtagcaagaaccacagc 295
>gb|CX659954.1|CX659954 PO01016C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01016C07 5', mRNA sequence
Length = 656
Score = 58.0 bits (29), Expect = 6e-007
Identities = 119/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 326 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 267
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 266 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 209
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 208 ggtcttggttgtagcaagaaccacagc 182
>gb|DN483963.1|DN483963 PSO205A01 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1305
Score = 56.0 bits (28), Expect = 2e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 460 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 401
Query: 532 ggaactccttgcgcatcacagacttgtg 559
||||||||| ||| |||||||||||
Sbjct: 400 tgaactccttcttcatgacagacttgtg 373
>gb|DN483987.1|DN483987 PSO205C01 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 1317
Score = 56.0 bits (28), Expect = 2e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||||||| ||||||||||||||| ||
Sbjct: 461 tcagatcaggcctgtaattgttatctgcaacctggttttccacagccttggccatgcggc 402
Query: 532 ggaactccttgcgcatcacagacttgtg 559
||||||||| ||| |||||||||||
Sbjct: 401 tgaactccttcttcatgacagacttgtg 374
>gb|CA926570.1|CA926570 MTU6CR.P16.E11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 52.0 bits (26), Expect = 4e-005
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaa 459
|||||||||||||||||||||| |||| ||||| || ||| | |||| ||| ||||
Sbjct: 401 tcttcttgacaccggacttggctaccttaaggctcctgtgcacagcactcaaccttgcaa 342
Query: 460 gagctggcttggtcagatcaggcctgtagtagtt 493
|||||| || |||||||||||||||| |||||
Sbjct: 341 gagctgctttcttcagatcaggcctgtaatagtt 308
>gb|CA926819.1|CA926819 MTU6CR.P1.E06 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 448
Score = 52.0 bits (26), Expect = 4e-005
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaa 459
|||||||||||||||||||||| |||| || || || ||| | |||| ||| ||||
Sbjct: 397 tcttcttgacaccggacttggctaccttaagactcctgtgcacagcactcaaccttgcaa 338
Query: 460 gagctggcttggtcagatcaggcctgtagtagtt 493
|||||| || ||||||||||||||||||||||
Sbjct: 337 gagctgctttcttcagatcaggcctgtagtagtt 304
>gb|BU829368.1|BU829368 K039P33P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 604
Score = 50.1 bits (25), Expect = 2e-004
Identities = 97/119 (81%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||
Sbjct: 323 aacctggttttccacagccttggccatgcggctgaactccttcttcatgacagacttgtg 264
Query: 560 --gctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagc 616
|| ||| |||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 263 aagcaaagc--agcaggtttgttctgcttcttggtcttggttgtagcaagaaccacagc 207
>gb|BU831219.1|BU831219 T019A08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 755
Score = 50.1 bits (25), Expect = 2e-004
Identities = 97/119 (81%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||
Sbjct: 430 aacctggttttccacagccttggccatgcggctgaactccttcttcatgacagacttgtg 371
Query: 560 --gctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagc 616
|| ||| |||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 370 aagcaaagc--agcaggtttgttctgcttcttggtcttggttgtagcaagaaccacagc 314
>gb|BU831320.1|BU831320 T020B07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 694
Score = 50.1 bits (25), Expect = 2e-004
Identities = 118/147 (80%), Gaps = 4/147 (2%)
Strand = Plus / Minus
Query: 472 tcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgc 531
|||||||||||||||| | ||| || ||||||| ||| ||||||||||||||| ||
Sbjct: 457 tcagatcaggcctgtaattgttatctgcaacctggatttccacagccttggccatgcggc 398
Query: 532 ggaactccttgcgcatcacagacttgtg--gctgagcttcgcaggtgcgttctgcttctt 589
||||||||| ||| ||||||||||| || ||| |||||| ||||||||||||
Sbjct: 397 tgaactccttcttcatgacagacttgtgaagcaaagc--agcaggtttgttctgcttctt 340
Query: 590 ggtcttggtagtagagaggaccacagc 616
||||||||| |||| || ||||||||
Sbjct: 339 ggtcttggttgtagcaagaaccacagc 313
>gb|BU891143.1|BU891143 P046E05 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 556
Score = 50.1 bits (25), Expect = 2e-004
Identities = 97/119 (81%), Gaps = 4/119 (3%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||
Sbjct: 326 aacctggttttccacagccttggccatgcggctgaactccttcttcatgacagacttgtg 267
Query: 560 --gctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagc 616
|| ||| |||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 266 aagcaaagc--agcaggtttgttctgcttcttggtcttggttgtagcaagaaccacagc 210
>gb|CK087928.1|CK087928 A026P69.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A026P69 3', mRNA sequence
Length = 735
Score = 50.1 bits (25), Expect = 2e-004
Identities = 97/119 (81%), Gaps = 4/119 (3%)
Strand = Plus / Plus
Query: 500 aacctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||
Sbjct: 373 aacctggttttccacagccttggccatgcggctgaactccttcttcatgacagacttgtg 432
Query: 560 --gctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagc 616
|| ||| |||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 433 aagcaaagc--agcaggtttgttctgcttcttggtcttggttgtagcaagaaccacagc 489
>gb|BU815077.1|BU815077 N036H04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 572
Score = 48.1 bits (24), Expect = 6e-004
Identities = 87/106 (82%), Gaps = 4/106 (3%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
||||||||||| ||||||||||||||| || ||||||||| ||| |||||||||||
Sbjct: 172 aacctggttttccacagccttggccatgcggctgaactccttcttcatgacagacttgtg 113
Query: 560 --gctgagcttcgcaggtgcgttctgcttcttggtcttggtagtag 603
|| ||| |||||| ||||||||||||||||||||| ||||
Sbjct: 112 aagcaaagca--gcaggtttgttctgcttcttggtcttggttgtag 69
>gb|AI162912.1|AI162912 A026P69U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 392
Score = 46.1 bits (23), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 578 gttctgcttcttggtcttggtagtagagaggaccacagc 616
||||||||||||||||||||| |||| || ||||||||
Sbjct: 279 gttctgcttcttggtcttggttgtagcaagaaccacagc 241
>gb|BI129166.1|BI129166 G086P76Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 46.1 bits (23), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 578 gttctgcttcttggtcttggtagtagagaggaccacagc 616
||||||||||||||||||||| |||| || ||||||||
Sbjct: 331 gttctgcttcttggtcttggttgtagcaagaaccacagc 293
>gb|BU831781.1|BU831781 T025F12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 685
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccat 526
||||||||||| |||||||||||||||
Sbjct: 431 aacctggttttccacagccttggccat 405
Score = 46.1 bits (23), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 578 gttctgcttcttggtcttggtagtagagaggaccacagc 616
||||||||||||||||||||| |||| || ||||||||
Sbjct: 353 gttctgcttcttggtcttggttgtagcaagaaccacagc 315
>gb|BU836658.1|BU836658 T089C11 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 455
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 500 aacctggtttttcacagccttggccat 526
||||||||||| |||||||||||||||
Sbjct: 91 aacctggttttccacagccttggccat 65
>gb|CA925763.1|CA925763 MTU7TL.P5.F01 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CA927219.1|CA927219 MTU6CR.P6.D10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CA927242.1|CA927242 MTU6CR.P6.F10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CA927922.1|CA927922 MTU6TR.P14.F02 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CA928149.1|CA928149 MTU6TR.P17.C10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CA928233.1|CA928233 MTU6TR.P18.C04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 52 tcttcttgacaccggacttggctacct 78
>gb|CA928554.1|CA928554 MTU6TR.P4.A06 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 52 tcttcttgacaccggacttggctacct 78
>gb|CA928668.1|CA928668 MTU6TR.P5.D09 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 452
Score = 46.1 bits (23), Expect = 0.002
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacct 426
|||||||||||||||||||||| ||||
Sbjct: 401 tcttcttgacaccggacttggctacct 375
>gb|CK117266.1|CK117266 B031P40 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B031P40 5', mRNA sequence
Length = 266
Score = 46.1 bits (23), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 578 gttctgcttcttggtcttggtagtagagaggaccacagc 616
||||||||||||||||||||| |||| || ||||||||
Sbjct: 248 gttctgcttcttggtcttggttgtagcaagaaccacagc 210
>gb|CX172711.1|CX172711 A02_69-122_02.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 715
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 437 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 378
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 377 ttctccacagccttagccatgcggcggaactcctt 343
>gb|CX173246.1|CX173246 B11_69-30_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 576
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 438 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 379
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 378 ttctccacagccttagccatgcggcggaactcctt 344
>gb|CX176307.1|CX176307 E01_69-114_09.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 693
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 435 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 376
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 375 ttctccacagccttagccatgcggcggaactcctt 341
>gb|CX177585.1|CX177585 D05_45-51_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 618
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 356 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 297
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 296 ttctccacagccttagccatgcggcggaactcctt 262
>gb|DT469436.1|DT469436 WS01917.C21_M05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_M05 3', mRNA sequence
Length = 776
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 421 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 362
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 361 ttctccacagccttagccatgcggcggaactcctt 327
>gb|DT502705.1|DT502705 WS0133.BR_O21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0133_O21 5', mRNA sequence
Length = 758
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 447 ctcagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctgg 506
|||| ||| |||||||||| || |||||||||||||||| |||||| | ||||||
Sbjct: 437 ctcaaccttgcaagagctgctttcttcagatcaggcctgtaatagttgccttctacctgg 378
Query: 507 tttttcacagccttggccatcttgcggaactcctt 541
|| | ||||||||| ||||| ||||||||||||
Sbjct: 377 ttctccacagccttagccatgcggcggaactcctt 343
>gb|CA928602.1|CA928602 MTU6TR.P4.F02 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 455
Score = 44.1 bits (22), Expect = 0.009
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 400 tcttcttgacaccggacttggc 421
||||||||||||||||||||||
Sbjct: 52 tcttcttgacaccggacttggc 73
>gb|CX177348.1|CX177348 B02_45-117_04.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 689
Score = 44.1 bits (22), Expect = 0.009
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 393 ctgttcttcttcttgacaccggacttggcaacct 426
|||||| ||||||||||||| |||||||| ||||
Sbjct: 501 ctgttcctcttcttgacaccagacttggctacct 468
>gb|CX178752.1|CX178752 H02_45-119_16.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 689
Score = 44.1 bits (22), Expect = 0.009
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 393 ctgttcttcttcttgacaccggacttggcaacct 426
|||||| ||||||||||||| |||||||| ||||
Sbjct: 480 ctgttcctcttcttgacaccagacttggctacct 447
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 123,294
Number of Sequences: 369679
Number of extensions: 123294
Number of successful extensions: 31062
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30864
Number of HSP's gapped (non-prelim): 183
length of query: 919
length of database: 203,408,664
effective HSP length: 19
effective length of query: 900
effective length of database: 196,384,763
effective search space: 176746286700
effective search space used: 176746286700
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)