BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB833334.1|CB833334 R01F11 two-month-old roots from clon... 70 1e-010
gb|BU826919.1|BU826919 UK126TD03 Populus apical shoot cDNA ... 68 5e-010
gb|BU836413.1|BU836413 T086C06 Populus apical shoot cDNA li... 68 5e-010
gb|CF235767.1|CF235767 PtaJXT0026G1G0113 Poplar cDNA librar... 68 5e-010
gb|CK098094.1|CK098094 A004P24.5pR Hybrid aspen plasmid lib... 68 5e-010
gb|AJ774940.1|AJ774940 AJ774940 Populus euphratica shoot 3-... 68 5e-010
gb|AJ774951.1|AJ774951 AJ774951 Populus euphratica shoot 3-... 68 5e-010
gb|CX656298.1|CX656298 PO02052H03 Poplar SC cDNA library Po... 68 5e-010
gb|CX657459.1|CX657459 PO02047B05 Poplar SC cDNA library Po... 66 2e-009
gb|CF230316.1|CF230316 PtaC0006G12G1214 Poplar cDNA library... 64 8e-009
gb|BU878135.1|BU878135 V043E09 Populus flower cDNA library ... 60 1e-007
gb|CA926082.1|CA926082 MTU7TL.P9.H06 Aspen leaf cDNA Librar... 60 1e-007
gb|CV247703.1|CV247703 WS01119.B21_A23 PT-P-FL-A-2 Populus ... 60 1e-007
gb|CV270181.1|CV270181 WS0151.B21_F01 PTxN-IB-A-6 Populus t... 60 1e-007
gb|DT494652.1|DT494652 WS01119.BR_A23 PT-P-FL-A-2 Populus t... 60 1e-007
gb|DT495928.1|DT495928 WS01121.BR_O10 PT-P-FL-A-2 Populus t... 60 1e-007
gb|DT526529.1|DT526529 WS02048.C21_E14 PTxN-IB-N-A-11 Popul... 60 1e-007
gb|AI165478.1|AI165478 A084P59U Hybrid aspen plasmid librar... 58 5e-007
gb|BI124057.1|BI124057 I035P13P Populus leaf cDNA library P... 58 5e-007
gb|BI129513.1|BI129513 G091P71Y Populus cambium cDNA librar... 58 5e-007
gb|BU808908.1|BU808908 UL51PD07 Populus leaf cDNA library P... 58 5e-007
gb|BU809500.1|BU809500 UL58TE04 Populus leaf cDNA library P... 58 5e-007
gb|BU809921.1|BU809921 UL63PG03 Populus leaf cDNA library P... 58 5e-007
gb|BU811543.1|BU811543 UL85TF09 Populus leaf cDNA library P... 58 5e-007
gb|BU812096.1|BU812096 UL92TB11 Populus leaf cDNA library P... 58 5e-007
gb|BU815251.1|BU815251 N039B06 Populus bark cDNA library Po... 58 5e-007
gb|BU816987.1|BU816987 UA11BPE09 Populus tremula cambium cD... 58 5e-007
gb|BU819478.1|BU819478 UA44BPA11 Populus tremula cambium cD... 58 5e-007
gb|BU819638.1|BU819638 UA45BPG08 Populus tremula cambium cD... 58 5e-007
gb|BU823183.1|BU823183 UB49DPA05 Populus tremula cambium cD... 58 5e-007
gb|BU823654.1|BU823654 UB55BPA10 Populus tremula cambium cD... 58 5e-007
gb|BU824626.1|BU824626 UB67DPA09 Populus tremula cambium cD... 58 5e-007
gb|BU825392.1|BU825392 UK108TB10 Populus apical shoot cDNA ... 58 5e-007
gb|BU825884.1|BU825884 UK114TC02 Populus apical shoot cDNA ... 58 5e-007
gb|BU828079.1|BU828079 K016P02P Populus apical shoot cDNA l... 58 5e-007
gb|BU829430.1|BU829430 K040P63P Populus apical shoot cDNA l... 58 5e-007
gb|BU832723.1|BU832723 T037E05 Populus apical shoot cDNA li... 58 5e-007
gb|BU834482.1|BU834482 T061G02 Populus apical shoot cDNA li... 58 5e-007
gb|BU837044.1|BU837044 T094A04 Populus apical shoot cDNA li... 58 5e-007
gb|BU868639.1|BU868639 M118D03 Populus flower cDNA library ... 58 5e-007
gb|BU875839.1|BU875839 V012B02 Populus flower cDNA library ... 58 5e-007
gb|BU877557.1|BU877557 V036B11 Populus flower cDNA library ... 58 5e-007
gb|BU881425.1|BU881425 UM62TE04 Populus flower cDNA library... 58 5e-007
gb|BU882204.1|BU882204 UM74TA08 Populus flower cDNA library... 58 5e-007
gb|BU884725.1|BU884725 R014F10 Populus root cDNA library Po... 58 5e-007
gb|BU889040.1|BU889040 P015H10 Populus petioles cDNA librar... 58 5e-007
gb|BU889467.1|BU889467 P021D10 Populus petioles cDNA librar... 58 5e-007
gb|BU892322.1|BU892322 P062B09 Populus petioles cDNA librar... 58 5e-007
gb|CA927715.1|CA927715 MTU6TR.P12.B06 Aspen root cDNA Libra... 58 5e-007
gb|CA927776.1|CA927776 MTU6TR.P12.G12 Aspen root cDNA Libra... 58 5e-007
gb|CA927997.1|CA927997 MTU6TR.P15.E07 Aspen root cDNA Libra... 58 5e-007
gb|CA928946.1|CA928946 MTU6TR.P8.F12 Aspen root cDNA Librar... 58 5e-007
gb|CA931171.1|CA931171 MTU2TA.P3.C07 Aspen apex cDNA Librar... 58 5e-007
gb|CB240487.1|CB240487 PopSC00510 Poplar SC cDNA library Po... 58 5e-007
gb|CA821706.1|CA821706 RSH06D05 two-month-old roots from cl... 58 5e-007
gb|CA822275.1|CA822275 R05H06 two-month-old roots from clon... 58 5e-007
gb|CA825619.1|CA825619 R63E05 two-month-old roots from clon... 58 5e-007
gb|CA825697.1|CA825697 R64H05 two-month-old roots from clon... 58 5e-007
gb|CB239704.1|CB239704 RSH15F01 two-month-old roots from cl... 58 5e-007
gb|CF228366.1|CF228366 PtaXM0012B4B0404 Poplar cDNA library... 58 5e-007
gb|CK094491.1|CK094491 I035P13.3pR Populus senescing leaves... 58 5e-007
gb|CK099794.1|CK099794 A084P59.5pR Hybrid aspen plasmid lib... 58 5e-007
gb|CK104452.1|CK104452 I035P13.5pR Populus senescing leaves... 58 5e-007
gb|CK110253.1|CK110253 N054H03 Populus bark cDNA library Po... 58 5e-007
gb|CK113586.1|CK113586 UR109TC11 Populus root cDNA library ... 58 5e-007
gb|CN522660.1|CN522660 GQ0123.B3_A22 GQ012 Populus trichoca... 58 5e-007
gb|CV246706.1|CV246706 WS01111.B21_K11 PT-P-FL-A-2 Populus ... 58 5e-007
gb|CV248981.1|CV248981 WS01122.B21_K03 PT-P-FL-A-2 Populus ... 58 5e-007
gb|CV249565.1|CV249565 WS01124.B21_J16 PT-P-FL-A-2 Populus ... 58 5e-007
gb|CV251146.1|CV251146 WS0115.B21_P23 PT-P-FL-A-2 Populus t... 58 5e-007
gb|CV259038.1|CV259038 WS02010.B21_D06 PTxN-IB-N-A-11 Popul... 58 5e-007
gb|CV263899.1|CV263899 WS02023.B21_B09 PTxN-IB-N-A-11 Popul... 58 5e-007
gb|CV275779.1|CV275779 WS0177.B21_J10 PTxD-NR-A-8 Populus t... 58 5e-007
gb|CX654458.1|CX654458 PO02007B10 Poplar SC cDNA library Po... 58 5e-007
gb|CX656592.1|CX656592 PO02019G08 Poplar SC cDNA library Po... 58 5e-007
gb|CX659579.1|CX659579 PO01032D07 Poplar SC cDNA library Po... 58 5e-007
gb|DT496816.1|DT496816 WS01124.BR_J16 PT-P-FL-A-2 Populus t... 58 5e-007
gb|DT499868.1|DT499868 WS9991.BR_J06 PT-P-FL-A-2 Populus tr... 58 5e-007
gb|DT506555.1|DT506555 WS0189.C21_O06 PTxD-IL-N-A-9 Populus... 58 5e-007
gb|BU830876.1|BU830876 T014C02 Populus apical shoot cDNA li... 56 2e-006
gb|CA928978.1|CA928978 MTU6TR.P9.A12 Aspen root cDNA Librar... 52 3e-005
gb|CX657326.1|CX657326 PO02041D05 Poplar SC cDNA library Po... 52 3e-005
gb|BU814021.1|BU814021 N024A03 Populus bark cDNA library Po... 50 1e-004
gb|BU871096.1|BU871096 Q026G09 Populus flower cDNA library ... 50 1e-004
gb|BU875595.1|BU875595 V009A04 Populus flower cDNA library ... 50 1e-004
gb|BU879864.1|BU879864 UM38TD12 Populus flower cDNA library... 50 1e-004
gb|CV228878.1|CV228878 WS01911.B21_I06 PT-DX-N-A-10 Populus... 50 1e-004
gb|CV279091.1|CV279091 WS0148.B21_F22 PTxD-IL-A-5 Populus t... 50 1e-004
gb|BU823895.1|BU823895 UB57BPH03 Populus tremula cambium cD... 48 5e-004
gb|BU825804.1|BU825804 UK113TC08 Populus apical shoot cDNA ... 48 5e-004
gb|BU827707.1|BU827707 K007P54P Populus apical shoot cDNA l... 48 5e-004
gb|BU829183.1|BU829183 K036P22P Populus apical shoot cDNA l... 48 5e-004
gb|BU829722.1|BU829722 K046P95P Populus apical shoot cDNA l... 48 5e-004
gb|BU830653.1|BU830653 T011C06 Populus apical shoot cDNA li... 48 5e-004
gb|BU831732.1|BU831732 T025A10 Populus apical shoot cDNA li... 48 5e-004
gb|BU831809.1|BU831809 T026A08 Populus apical shoot cDNA li... 48 5e-004
gb|BU831827.1|BU831827 T026C03 Populus apical shoot cDNA li... 48 5e-004
gb|BU834711.1|BU834711 T064G09 Populus apical shoot cDNA li... 48 5e-004
gb|BU836816.1|BU836816 T091C06 Populus apical shoot cDNA li... 48 5e-004
gb|BU837615.1|BU837615 T103G10 Populus apical shoot cDNA li... 48 5e-004
gb|BU838031.1|BU838031 T108G05 Populus apical shoot cDNA li... 48 5e-004
gb|BU863050.1|BU863050 S023C03 Populus imbibed seed cDNA li... 48 5e-004
gb|BU863773.1|BU863773 S032B08 Populus imbibed seed cDNA li... 48 5e-004
gb|BU866230.1|BU866230 S064C06 Populus imbibed seed cDNA li... 48 5e-004
gb|BU869723.1|BU869723 Q003G10 Populus flower cDNA library ... 48 5e-004
gb|BU871248.1|BU871248 Q028E02 Populus flower cDNA library ... 48 5e-004
gb|BU873359.1|BU873359 Q054D12 Populus flower cDNA library ... 48 5e-004
gb|BU873368.1|BU873368 Q054E12 Populus flower cDNA library ... 48 5e-004
gb|BU873827.1|BU873827 Q060D05 Populus flower cDNA library ... 48 5e-004
gb|BU874282.1|BU874282 Q066D02 Populus flower cDNA library ... 48 5e-004
gb|BU876099.1|BU876099 V016B04 Populus flower cDNA library ... 48 5e-004
gb|BU881476.1|BU881476 UM63TC04 Populus flower cDNA library... 48 5e-004
gb|BU884397.1|BU884397 R010B05 Populus root cDNA library Po... 48 5e-004
gb|BU885617.1|BU885617 R033G04 Populus root cDNA library Po... 48 5e-004
gb|BU895179.1|BU895179 X020D01 Populus wood cDNA library Po... 48 5e-004
gb|CA927018.1|CA927018 MTU6CR.P3.H10 Aspen root cDNA Librar... 48 5e-004
gb|CA928466.1|CA928466 MTU6TR.P3.A09 Aspen root cDNA Librar... 48 5e-004
gb|CA928531.1|CA928531 MTU6TR.P3.G06 Aspen root cDNA Librar... 48 5e-004
gb|CA928543.1|CA928543 MTU6TR.P3.H07 Aspen root cDNA Librar... 48 5e-004
gb|CF235059.1|CF235059 PtaJXT0018D4D0408 Poplar cDNA librar... 48 5e-004
gb|CK099347.1|CK099347 A063P45.5pR Hybrid aspen plasmid lib... 48 5e-004
gb|CK109244.1|CK109244 K055P90 Populus apical shoot cDNA li... 48 5e-004
gb|CK112783.1|CK112783 T058B11 Populus shoot meristem cDNA ... 48 5e-004
gb|CN519132.1|CN519132 GQ0103.B3_A07 GQ010 Populus trichoca... 48 5e-004
gb|CN521814.1|CN521814 GQ0113.B3_H05 GQ011 Populus trichoca... 48 5e-004
gb|AJ768578.1|AJ768578 AJ768578 Populus euphratica leaf adu... 48 5e-004
gb|AJ773180.1|AJ773180 AJ773180 Populus euphratica leaf 3-6... 48 5e-004
gb|AJ777328.1|AJ777328 AJ777328 Populus euphratica root 3-6... 48 5e-004
gb|CV228744.1|CV228744 WS01911.B21_B18 PT-DX-N-A-10 Populus... 48 5e-004
gb|CV236003.1|CV236003 WS01222.B21_H06 PT-GT-FL-A-3 Populus... 48 5e-004
gb|CV243816.1|CV243816 WS0252.B21_O21 PT-MB-N-A-15 Populus ... 48 5e-004
gb|CV254292.1|CV254292 WS0224.B21_L05 PTxD-ICC-A-12 Populus... 48 5e-004
gb|CV259686.1|CV259686 WS02012.B21_A04 PTxN-IB-N-A-11 Popul... 48 5e-004
gb|CV271028.1|CV271028 WS0153.B21_J15 PTxN-IB-A-6 Populus t... 48 5e-004
gb|CV271274.1|CV271274 WS0154.B21_E03 PTxN-IB-A-6 Populus t... 48 5e-004
gb|CV271598.1|CV271598 WS0155.B21_C09 PTxN-IB-A-6 Populus t... 48 5e-004
gb|CV274514.1|CV274514 WS0173.B21_I07 PTxD-NR-A-8 Populus t... 48 5e-004
gb|CV274713.1|CV274713 WS0174.B21.1_C08 PTxD-NR-A-8 Populus... 48 5e-004
gb|CV278206.1|CV278206 WS0145.B21_M05 PTxD-IL-A-5 Populus t... 48 5e-004
gb|CV281342.1|CV281342 WS0181.B21_K17 PTxD-IL-N-A-9 Populus... 48 5e-004
gb|CX178031.1|CX178031 E05_45-107_09.ab1 leaf inoculated wi... 48 5e-004
gb|CX184280.1|CX184280 G01_45-122_13.ab1 leaf inoculated wi... 48 5e-004
gb|CX654125.1|CX654125 PO02013D12 Poplar SC cDNA library Po... 48 5e-004
gb|CX654786.1|CX654786 PO02059F08 Poplar SC cDNA library Po... 48 5e-004
gb|DN487401.1|DN487401 Q024E09.3pR Populus dormant bud cDNA... 48 5e-004
gb|DN488084.1|DN488084 R031G04.3pR Populus root cDNA librar... 48 5e-004
gb|DN497017.1|DN497017 Q024E09.5pR Populus dormant bud cDNA... 48 5e-004
gb|DT479628.1|DT479628 WS02526.BR_H09 PT-MB-N-A-15 Populus ... 48 5e-004
gb|DT484804.1|DT484804 WS02526.B21_H09 PT-MB-N-A-15 Populus... 48 5e-004
gb|DT506076.1|DT506076 WS01812.C21_K02 PTxD-IL-N-A-9 Populu... 48 5e-004
gb|AI165793.1|AI165793 A091p57u Hybrid aspen plasmid librar... 46 0.002
gb|AI166233.1|AI166233 a063p45u Hybrid aspen plasmid librar... 46 0.002
gb|AI166818.1|AI166818 xylem.est.612 Poplar xylem Lambda ZA... 46 0.002
gb|BU811060.1|BU811060 UL79TE01 Populus leaf cDNA library P... 46 0.002
gb|BU828833.1|BU828833 K029P55P Populus apical shoot cDNA l... 46 0.002
gb|BU831221.1|BU831221 T019A10 Populus apical shoot cDNA li... 46 0.002
gb|BU833308.1|BU833308 T044H10 Populus apical shoot cDNA li... 46 0.002
gb|BU834647.1|BU834647 T064A05 Populus apical shoot cDNA li... 46 0.002
gb|BU871465.1|BU871465 Q030H08 Populus flower cDNA library ... 46 0.002
gb|CA930946.1|CA930946 MTU2TA.P12.F07 Aspen apex cDNA Libra... 46 0.002
gb|CA823849.1|CA823849 R32C09 two-month-old roots from clon... 46 0.002
gb|CK089128.1|CK089128 A091P57.3pR Hybrid aspen plasmid lib... 46 0.002
gb|CK099954.1|CK099954 A091P57.5pR Hybrid aspen plasmid lib... 46 0.002
gb|CV225921.1|CV225921 WS0162.B21_M10 PT-DX-A-7 Populus tri... 46 0.002
gb|CV238292.1|CV238292 WS0126.B21_A20 PT-GT-FL-A-3 Populus ... 46 0.002
gb|CV238681.1|CV238681 WS0127.B21.1_J22 PT-GT-FL-A-3 Populu... 46 0.002
gb|CV246478.1|CV246478 WS01110.B21_K15 PT-P-FL-A-2 Populus ... 46 0.002
gb|CV250327.1|CV250327 WS0113.B21_D11 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV251774.1|CV251774 WS0118.B21_A08 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV251786.1|CV251786 WS0118.B21_B07 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV268723.1|CV268723 WS0206.B21_E09 PTxN-IB-N-A-11 Populu... 46 0.002
gb|CV275067.1|CV275067 WS0175.B21_D22 PTxD-NR-A-8 Populus t... 46 0.002
gb|DT475112.1|DT475112 WS0126.BR_A20 PT-GT-FL-A-3 Populus t... 46 0.002
gb|DT475598.1|DT475598 WS0127.BR_J22 PT-GT-FL-A-3 Populus t... 46 0.002
gb|DT497695.1|DT497695 WS0113.BR_D11 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT499337.1|DT499337 WS0118.BR_A08 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT499355.1|DT499355 WS0118.BR_B07 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT499778.1|DT499778 WS9991.BR_F05 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT507422.1|DT507422 WS02418.BR_D13 PTxD-ICC-N-A-14 Popul... 46 0.002
gb|DT512050.1|DT512050 WS02418.B21_D13 PTxD-ICC-N-A-14 Popu... 46 0.002
gb|DT524362.1|DT524362 WS02042.C21.1_G22 PTxN-IB-N-A-11 Pop... 46 0.002
gb|DT525920.1|DT525920 WS02046.C21_K08 PTxN-IB-N-A-11 Popul... 46 0.002
gb|AI161628.1|AI161628 A004P24U Hybrid aspen plasmid librar... 44 0.007
gb|BI070140.1|BI070140 C014P61U Populus strain T89 leaves P... 44 0.007
gb|BU102234.1|BU102234 mep49 Poplar developing cambium Popu... 44 0.007
gb|BU833026.1|BU833026 T040H06 Populus apical shoot cDNA li... 44 0.007
gb|CA931981.1|CA931981 MTU4TA.P25.D06 Aspen apex cDNA Libra... 44 0.007
gb|CV236047.1|CV236047 WS01222.B21_K02 PT-GT-FL-A-3 Populus... 44 0.007
gb|CV276109.1|CV276109 WS0178.B21.1_K17 PTxD-NR-A-8 Populus... 42 0.028
gb|BU862757.1|BU862757 S019F07 Populus imbibed seed cDNA li... 40 0.11
gb|BU878601.1|BU878601 V049C09 Populus flower cDNA library ... 40 0.11
gb|BU892736.1|BU892736 P068G10 Populus petioles cDNA librar... 40 0.11
gb|DN497764.1|DN497764 R031G04.5pR Populus root cDNA librar... 40 0.11
gb|BU832056.1|BU832056 T028H08 Populus apical shoot cDNA li... 38 0.44
gb|BU880942.1|BU880942 UM56TG09 Populus flower cDNA library... 38 0.44
gb|BU892348.1|BU892348 P062E07 Populus petioles cDNA librar... 38 0.44
gb|BU893597.1|BU893597 P079H01 Populus petioles cDNA librar... 38 0.44
gb|CA928372.1|CA928372 MTU6TR.P1.H03 Aspen root cDNA Librar... 38 0.44
gb|CN520241.1|CN520241 GQ0105.B3_A05 GQ010 Populus trichoca... 38 0.44
>gb|CB833334.1|CB833334 R01F11 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 521
Score = 69.9 bits (35), Expect = 1e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 309 catctggggcaaggtcgcccgcccgcatggcaactccggcgtcgtccgcgc 359
|||||||||||||||| ||||||| || |||||||||||||| ||||||||
Sbjct: 283 catctggggcaaggtcacccgccctcacggcaactccggcgttgtccgcgc 333
>gb|BU826919.1|BU826919 UK126TD03 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 67.9 bits (34), Expect = 5e-010
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 191 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 249
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || |||||||| |||||||||||||||||||||
Sbjct: 250 ctacaaggccaaggtgaagaagaatggaacccactatcgctgcatctggggcaaggtc 307
>gb|BU836413.1|BU836413 T086C06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 574
Score = 67.9 bits (34), Expect = 5e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacccactaccgc 306
|||||||| ||||| |||||||||||||||||| |||| || || |||||||| |||
Sbjct: 226 gggaagcgtatggcatacatctacaaggccaaggtgaagaacaatggaacccactatcgc 285
Query: 307 tgcatctggggcaaggtc 324
||||| ||||||||||||
Sbjct: 286 tgcatttggggcaaggtc 303
>gb|CF235767.1|CF235767 PtaJXT0026G1G0113 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 617
Score = 67.9 bits (34), Expect = 5e-010
Identities = 99/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 196 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 254
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || |||||||| |||||||||||||||||||||
Sbjct: 255 ctacaaggccaaggtgaagaagaatggaacccactatcgctgcatctggggcaaggtc 312
>gb|CK098094.1|CK098094 A004P24.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A004P24 5', mRNA sequence
Length = 486
Score = 67.9 bits (34), Expect = 5e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacccactaccgc 306
|||||||| ||||| |||||||||||||||||| |||| || || |||||||| |||
Sbjct: 212 gggaagcgtatggcatacatctacaaggccaaggtgaagaacaatggaacccactatcgc 271
Query: 307 tgcatctggggcaaggtc 324
||||| ||||||||||||
Sbjct: 272 tgcatttggggcaaggtc 289
>gb|AJ774940.1|AJ774940 AJ774940 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026A07F1, mRNA sequence
Length = 560
Score = 67.9 bits (34), Expect = 5e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacccactaccgc 306
|||||||| ||||| |||||||||||||||||| |||| | || |||||||| |||
Sbjct: 218 gggaagcgtatggcatacatctacaaggccaaggtgaagaagaatggaacccactatcgc 277
Query: 307 tgcatctggggcaaggtc 324
||||||||||||||||||
Sbjct: 278 tgcatctggggcaaggtc 295
>gb|AJ774951.1|AJ774951 AJ774951 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026B07F1, mRNA sequence
Length = 508
Score = 67.9 bits (34), Expect = 5e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacccactaccgc 306
|||||||| ||||| |||||||||||||||||| |||| | || |||||||| |||
Sbjct: 218 gggaagcgtatggcatacatctacaaggccaaggtgaagaagaatggaacccactatcgc 277
Query: 307 tgcatctggggcaaggtc 324
||||||||||||||||||
Sbjct: 278 tgcatctggggcaaggtc 295
>gb|CX656298.1|CX656298 PO02052H03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02052H03 5', mRNA sequence
Length = 444
Score = 67.9 bits (34), Expect = 5e-010
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaagaccaagagcagcggcacccactaccgc 306
|||||||| ||||| |||||||||||||||||| |||| | || |||||||| |||
Sbjct: 33 gggaagcgtatggcatacatctacaaggccaaggtgaagaagaatggaacccactatcgc 92
Query: 307 tgcatctggggcaaggtc 324
||||||||||||||||||
Sbjct: 93 tgcatctggggcaaggtc 110
>gb|CX657459.1|CX657459 PO02047B05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02047B05 5', mRNA sequence
Length = 602
Score = 65.9 bits (33), Expect = 2e-009
Identities = 109/132 (82%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 179 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 237
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtcgc 326
||||||||||||| |||| | || |||||||| || |||||||||||||||||| |
Sbjct: 238 ctacaaggccaaggtgaagaagaatggaacccactatcgntgcatctggggcaaggtcac 297
Query: 327 ccgcccgcatgg 338
| |||| |||||
Sbjct: 298 cagccctcatgg 309
>gb|CF230316.1|CF230316 PtaC0006G12G1214 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 603
Score = 63.9 bits (32), Expect = 8e-009
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 188 gagggagtcaacaccaaggangaggttgcatggta-tgctgggaagcgtatggcatacat 246
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| || | | || |||||||| |||||||||||||||||||||
Sbjct: 247 ctacaaggccaaggtgaanaagaatggaacccactatcgctgcatctggggcaaggtc 304
>gb|BU878135.1|BU878135 V043E09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 506
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 173 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 231
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 232 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 289
>gb|CA926082.1|CA926082 MTU7TL.P9.H06 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 520
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 226 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 168
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || |||||||| ||| |||||||||||||||||
Sbjct: 167 ctacaaggccaaggtgaagaagaatggaacccactatcgccgcatctggggcaaggtc 110
>gb|CV247703.1|CV247703 WS01119.B21_A23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_A23 3', mRNA sequence
Length = 714
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 568 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 510
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 509 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 452
>gb|CV270181.1|CV270181 WS0151.B21_F01 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_F01 3', mRNA sequence
Length = 864
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 532 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 474
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 473 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 416
>gb|DT494652.1|DT494652 WS01119.BR_A23 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_A23 5', mRNA sequence
Length = 736
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 197 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 255
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 256 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 313
>gb|DT495928.1|DT495928 WS01121.BR_O10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_O10 5', mRNA sequence
Length = 657
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 200 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 258
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 259 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 316
>gb|DT526529.1|DT526529 WS02048.C21_E14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_E14 3', mRNA sequence
Length = 582
Score = 60.0 bits (30), Expect = 1e-007
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 208 gagggggtgaacaccaaggaggacgtcgcgtggtactgc-gggaagcggatggcctacat 266
||||| || ||||||||||| || || || ||||| ||| |||||||| ||||| |||||
Sbjct: 177 gagggagtcaacaccaaggaagaggttgcatggta-tgctgggaagcgtatggcatacat 235
Query: 267 ctacaaggccaagaccaagagcagcggcacccactaccgctgcatctggggcaaggtc 324
||||||||||||| |||| | || ||||||| |||||||||||||||||||||
Sbjct: 236 ctacaaggccaaggtgaagaagaatggatcccactatcgctgcatctggggcaaggtc 293
>gb|AI165478.1|AI165478 A084P59U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 311
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 159 gggaagcggatggcatacatctacaaggccaag 191
>gb|BI124057.1|BI124057 I035P13P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 488
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 178 gggaagcggatggcatacatctacaaggccaag 210
>gb|BI129513.1|BI129513 G091P71Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 448
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 205 gggaagcggatggcatacatctacaaggccaag 237
>gb|BU808908.1|BU808908 UL51PD07 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 470
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 208 gggaagcggatggcatacatctacaaggccaag 240
>gb|BU809500.1|BU809500 UL58TE04 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 228 gggaagcggatggcatacatctacaaggccaag 260
>gb|BU809921.1|BU809921 UL63PG03 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 504
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 234 gggaagcggatggcatacatctacaaggccaag 266
>gb|BU811543.1|BU811543 UL85TF09 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 567
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 227 gggaagcggatggcatacatctacaaggccaag 259
>gb|BU812096.1|BU812096 UL92TB11 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 573
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 229 gggaagcggatggcatacatctacaaggccaag 261
>gb|BU815251.1|BU815251 N039B06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 663
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 238 gggaagcggatggcatacatctacaaggccaag 270
>gb|BU816987.1|BU816987 UA11BPE09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 430
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 228 gggaagcggatggcatacatctacaaggccaag 260
>gb|BU819478.1|BU819478 UA44BPA11 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 533
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 194 gggaagcggatggcatacatctacaaggccaag 226
>gb|BU819638.1|BU819638 UA45BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 620
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 195 gggaagcggatggcatacatctacaaggccaag 227
>gb|BU823183.1|BU823183 UB49DPA05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 489
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 228 gggaagcggatggcatacatctacaaggccaag 260
>gb|BU823654.1|BU823654 UB55BPA10 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 424
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU824626.1|BU824626 UB67DPA09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 496
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU825392.1|BU825392 UK108TB10 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 588
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU825884.1|BU825884 UK114TC02 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 569
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU828079.1|BU828079 K016P02P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 236
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 14 gggaagcggatggcatacatctacaaggccaag 46
>gb|BU829430.1|BU829430 K040P63P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 437
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 220 gggaagcggatggcatacatctacaaggccaag 252
>gb|BU832723.1|BU832723 T037E05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 612
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 228 gggaagcggatggcatacatctacaaggccaag 260
>gb|BU834482.1|BU834482 T061G02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 547
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 221 gggaagcggatggcatacatctacaaggccaag 253
>gb|BU837044.1|BU837044 T094A04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 265
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 227 gggaagcggatggcatacatctacaaggccaag 259
>gb|BU868639.1|BU868639 M118D03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 590
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 208 gggaagcggatggcatacatctacaaggccaag 240
>gb|BU875839.1|BU875839 V012B02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 561
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 210 gggaagcggatggcatacatctacaaggccaag 242
>gb|BU877557.1|BU877557 V036B11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 544
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 210 gggaagcggatggcatacatctacaaggccaag 242
>gb|BU881425.1|BU881425 UM62TE04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 570
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU882204.1|BU882204 UM74TA08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 601
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 230 gggaagcggatggcatacatctacaaggccaag 262
>gb|BU884725.1|BU884725 R014F10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 571
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 210 gggaagcggatggcatacatctacaaggccaag 242
>gb|BU889040.1|BU889040 P015H10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 531
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 228 gggaagcggatggcatacatctacaaggccaag 260
>gb|BU889467.1|BU889467 P021D10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 538
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 229 gggaagcggatggcatacatctacaaggccaag 261
>gb|BU892322.1|BU892322 P062B09 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 650
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 231 gggaagcggatggcatacatctacaaggccaag 263
>gb|CA927715.1|CA927715 MTU6TR.P12.B06 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 327
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 158 gggaagcggatggcatacatctacaaggccaag 126
>gb|CA927776.1|CA927776 MTU6TR.P12.G12 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 263
Score = 58.0 bits (29), Expect = 5e-007
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 247 gggaagcggatggcctacatctacaaggccaag 279
|||||||||||||| ||||||||||||||||||
Sbjct: 156 gggaagcggatggcatacatctacaaggccaag 124
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 64,340
Number of Sequences: 369679
Number of extensions: 64340
Number of successful extensions: 18108
Number of sequences better than 0.5: 199
Number of HSP's better than 0.5 without gapping: 193
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 17578
Number of HSP's gapped (non-prelim): 437
length of query: 708
length of database: 203,408,664
effective HSP length: 19
effective length of query: 689
effective length of database: 196,384,763
effective search space: 135309101707
effective search space used: 135309101707
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)