BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= C4H2
(1794 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE187484.1|BE187484 NXNV_98_G10_F Nsf Xylem Normal wood ... 188 5e-046
gb|CF395486.1|CF395486 RTDS2_11_B10.g1_A021 Drought-stresse... 188 5e-046
gb|CF399839.1|CF399839 RTWW1_1_H11.g1_A015 Well-watered lob... 188 5e-046
gb|CF400053.1|CF400053 RTWW1_2_B07.g1_A015 Well-watered lob... 188 5e-046
gb|CF401178.1|CF401178 RTWW1_10_F06.g1_A015 Well-watered lo... 188 5e-046
gb|CF402326.1|CF402326 RTWW1_19_E10.g1_A015 Well-watered lo... 188 5e-046
gb|CF476223.1|CF476223 RTWW2_21_H07.g1_A021 Well-watered lo... 188 5e-046
gb|CF477426.1|CF477426 RTWW3_7_H02.g1_A022 Well-watered lob... 188 5e-046
gb|CF664576.1|CF664576 RTCNT1_10_E07.g1_A029 Root control P... 188 5e-046
gb|CO158422.1|CO158422 FLD1_6_G03.g1_A029 Root flooded Pinu... 188 5e-046
gb|CO161408.1|CO161408 FLD1_28_D03.g1_A029 Root flooded Pin... 188 5e-046
gb|CO172000.1|CO172000 NDL1_26_H11.b1_A029 Needles control ... 188 5e-046
gb|CO199878.1|CO199878 GEO2_4_C04.b1_A032 Root gravitropism... 188 5e-046
gb|CO199955.1|CO199955 GEO2_4_C04.g1_A032 Root gravitropism... 188 5e-046
gb|CO368135.1|CO368135 RTK1_38_G08.g1_A029 Roots minus pota... 188 5e-046
gb|CO369202.1|CO369202 RTK1_45_D02.g1_A029 Roots minus pota... 188 5e-046
gb|CV032008.1|CV032008 RTNACL1_5_D05.b1_A029 Roots plus add... 188 5e-046
gb|CX645269.1|CX645269 COLD1_1_C08.g1_A029 Root cold Pinus ... 188 5e-046
gb|CX648337.1|CX648337 COLD1_28_B08.b1_A029 Root cold Pinus... 188 5e-046
gb|DR010857.1|DR010857 HEAT1_1_F06.g1_A029 Root at 37 C for... 188 5e-046
gb|DR020355.1|DR020355 STRS1_36_H06.b1_A034 Shoot tip pitch... 188 5e-046
gb|DR020425.1|DR020425 STRS1_36_H06.g1_A034 Shoot tip pitch... 188 5e-046
gb|DR022465.1|DR022465 STRS1_51_F01.b1_A034 Shoot tip pitch... 188 5e-046
gb|DR053466.1|DR053466 RTCA1_11_G10.b1_A029 Roots minus cal... 188 5e-046
gb|DR069623.1|DR069623 RTDK1_8_H09.b1_A029 Roots, dark Pinu... 188 5e-046
gb|DR069742.1|DR069742 RTDK1_9_D10.b1_A029 Roots, dark Pinu... 188 5e-046
gb|DR077997.1|DR077997 RTFEPL1_1_G01.b1_A029 Roots plus add... 188 5e-046
gb|DR078053.1|DR078053 RTFEPL1_1_D06.g1_A029 Roots plus add... 188 5e-046
gb|DR078079.1|DR078079 RTFEPL1_1_G01.g1_A029 Roots plus add... 188 5e-046
gb|DR098259.1|DR098259 STRR1_40_E06.b1_A033 Stem Response R... 188 5e-046
gb|DR120850.1|DR120850 RTMG1_32_H05.b1_A029 Roots minus mag... 188 5e-046
gb|DR178053.1|DR178053 RTMNUT1_9_B04.b1_A029 Roots minus mi... 188 5e-046
gb|DR179407.1|DR179407 RTMNUT1_22_A02.b2_A029 Roots minus m... 188 5e-046
gb|DR180812.1|DR180812 RTMNUT1_35_B03.b1_A029 Roots minus m... 188 5e-046
gb|DR385097.1|DR385097 RTHG1_6_D02.g1_A029 Roots plus added... 188 5e-046
gb|CF387281.1|CF387281 RTDR1_11_A09.g1_A015 Loblolly pine r... 184 8e-045
gb|CF389398.1|CF389398 RTDR2_7_E10.b1_A021 Loblolly pine ro... 184 8e-045
gb|CF402842.1|CF402842 RTWW1_23_D03.b1_A015 Well-watered lo... 184 8e-045
gb|CF471221.1|CF471221 RTDS1_2_D09.b1_A015 Drought-stressed... 184 8e-045
gb|CF471858.1|CF471858 RTDS1_7_G12.b1_A015 Drought-stressed... 184 8e-045
gb|CF669934.1|CF669934 RTCNT1_47_B04.b1_A029 Root control P... 184 8e-045
gb|CO198057.1|CO198057 GEO1_11_A08.b1_A029 Root gravitropis... 184 8e-045
gb|DR022529.1|DR022529 STRS1_51_F01.g1_A034 Shoot tip pitch... 184 8e-045
gb|DR059327.1|DR059327 RTNIT1_17_C03.b1_A029 Roots minus ni... 184 8e-045
gb|DR101584.1|DR101584 STRR1_74_H05.b1_A033 Stem Response R... 184 8e-045
gb|DR743699.1|DR743699 RTCU1_17_D07.g1_A029 Roots plus adde... 184 8e-045
gb|DR744974.1|DR744974 RTCU1_26_D05.b1_A029 Roots plus adde... 184 8e-045
gb|DR745352.1|DR745352 RTCU1_28_E12.g1_A029 Roots plus adde... 184 8e-045
gb|CF400856.1|CF400856 RTWW1_8_G10.g1_A015 Well-watered lob... 183 3e-044
gb|AI812771.1|AI812771 18H4 Pine Lambda Zap Xylem library P... 181 1e-043
gb|CF473126.1|CF473126 RTDS1_1_A10.g1_A015 Drought-stressed... 181 1e-043
gb|CO160429.1|CO160429 FLD1_20_H12.g1_A029 Root flooded Pin... 181 1e-043
gb|CX650723.1|CX650723 COLD1_47_E04.g1_A029 Root cold Pinus... 181 1e-043
gb|DR023030.1|DR023030 STRS1_55_B12.b1_A034 Shoot tip pitch... 181 1e-043
gb|AW290024.1|AW290024 NXNV009G04F Nsf Xylem Normal wood Ve... 179 5e-043
gb|CD026691.1|CD026691 NXNV009G04 Nsf Xylem Normal wood Ver... 179 5e-043
gb|CF666119.1|CF666119 RTCNT1_21_A01.b1_A029 Root control P... 177 2e-042
gb|AI812842.1|AI812842 20F6 Pine Lambda Zap Xylem library P... 175 7e-042
gb|CF470481.1|CF470481 RTDS1_17_C04.g1_A015 Drought-stresse... 175 7e-042
gb|DR180889.1|DR180889 RTMNUT1_35_B03.g1_A029 Roots minus m... 175 7e-042
dbj|BD224279.1| Materials and methods for the modification ... 175 7e-042
gb|BQ699741.1|BQ699741 NXRV128_C09_F NXRV (Nsf Xylem Root w... 173 3e-041
gb|CF386137.1|CF386137 RTDR1_8_D09.g1_A015 Loblolly pine ro... 173 3e-041
gb|CF386488.1|CF386488 RTDR1_14_G02.g1_A015 Loblolly pine r... 173 3e-041
gb|CF477477.1|CF477477 RTWW3_8_G12.b1_A022 Well-watered lob... 173 3e-041
gb|CF479694.1|CF479694 RTWW3_11_A12.g1_A022 Well-watered lo... 173 3e-041
gb|CF669075.1|CF669075 RTCNT1_40_B01.g1_A029 Root control P... 173 3e-041
gb|CF669355.1|CF669355 RTCNT1_42_F10.g1_A029 Root control P... 173 3e-041
gb|CF672446.1|CF672446 RTCNT1_63_D08.g1_A029 Root control P... 173 3e-041
gb|BX681070.1|BX681070 BX681070 RS Pinus pinaster cDNA clon... 173 3e-041
gb|CO198374.1|CO198374 GEO1_13_E11.b1_A029 Root gravitropis... 173 3e-041
gb|CO366112.1|CO366112 RTK1_25_H12.g1_A029 Roots minus pota... 173 3e-041
gb|CO367203.1|CO367203 RTK1_32_G09.g1_A029 Roots minus pota... 173 3e-041
gb|CV137016.1|CV137016 EST848225 Sequencing ESTs from loblo... 173 3e-041
gb|CV137537.1|CV137537 EST848746 Sequencing ESTs from loblo... 173 3e-041
gb|CV145292.1|CV145292 EST856501 Sequencing ESTs from loblo... 173 3e-041
gb|CV148003.1|CV148003 EST859212 Sequencing ESTs from loblo... 173 3e-041
gb|DN458423.1|DN458423 EST954222 Sequencing ESTs from loblo... 173 3e-041
gb|DN459149.1|DN459149 EST954948 Sequencing ESTs from loblo... 173 3e-041
gb|DN459740.1|DN459740 EST955539 Sequencing ESTs from loblo... 173 3e-041
gb|DN460431.1|DN460431 EST956230 Sequencing ESTs from loblo... 173 3e-041
gb|DR048562.1|DR048562 RTBOR1_9_E10.g1_A029 Roots plus adde... 173 3e-041
gb|DR051105.1|DR051105 RTBOR1_27_E08.g1_A029 Roots plus add... 173 3e-041
gb|DR081268.1|DR081268 RTFEPL1_28_B04.g1_A029 Roots plus ad... 173 3e-041
gb|DR097597.1|DR097597 STRR1_35_F09.g4_A033 Stem Response R... 173 3e-041
gb|DR099653.1|DR099653 STRR1_57_D07.b1_A033 Stem Response R... 173 3e-041
gb|DR742942.1|DR742942 RTCU1_8_B04.g2_A029 Roots plus added... 173 3e-041
gb|AF096998.1| Pinus taeda trans-cinnamate 4-hydroxylase (T... 173 3e-041
dbj|BD224324.1| Materials and methods for the modification ... 173 3e-041
dbj|BD224400.1| Materials and methods for the modification ... 173 3e-041
dbj|BD272995.1| Materials and methods for the modification ... 173 3e-041
gb|CF400820.1|CF400820 RTWW1_8_G10.b1_A015 Well-watered lob... 171 1e-040
gb|AW042602.1|AW042602 ST23G12 Pine TriplEx shoot tip libra... 169 5e-040
gb|BF777569.1|BF777569 NXSI_070_A12_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|BG039758.1|BG039758 NXSI_103_F12_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|BG040113.1|BG040113 NXSI_106_F02_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|BG275516.1|BG275516 NXSI_139_E05_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|BG276019.1|BG276019 NXSI_147_E12_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|BQ702414.1|BQ702414 NXSI_128_D03_F NXSI (Nsf Xylem Side ... 169 5e-040
gb|CF471315.1|CF471315 RTDS1_2_D09.g1_A015 Drought-stressed... 169 5e-040
gb|CF473017.1|CF473017 RTDS1_1_A10.b1_A015 Drought-stressed... 169 5e-040
gb|CF670004.1|CF670004 RTCNT1_47_B04.g1_A029 Root control P... 169 5e-040
gb|CV137929.1|CV137929 EST849138 Sequencing ESTs from loblo... 169 5e-040
gb|DR010779.1|DR010779 HEAT1_1_F06.b1_A029 Root at 37 C for... 169 5e-040
gb|DR743628.1|DR743628 RTCU1_17_D07.b1_A029 Roots plus adde... 169 5e-040
gb|CF664502.1|CF664502 RTCNT1_10_E07.b1_A029 Root control P... 167 2e-039
gb|BX254863.1|BX254863 BX254863 Pinus pinaster differenciat... 165 7e-039
gb|BQ696484.1|BQ696484 NXPV_041_G06_F NXPV (Nsf Xylem Plani... 165 7e-039
gb|BQ699654.1|BQ699654 NXRV125_B02_F NXRV (Nsf Xylem Root w... 165 7e-039
gb|CF402046.1|CF402046 RTWW1_16_D12.g1_A015 Well-watered lo... 165 7e-039
gb|DR101658.1|DR101658 STRR1_74_H05.g1_A033 Stem Response R... 165 7e-039
gb|DR385324.1|DR385324 RTHG1_8_A11.b1_A029 Roots plus added... 165 7e-039
emb|BX784398.1| Pinus pinaster STS PPC4HP1, sequence tagged... 165 7e-039
gb|AA556941.1|AA556941 783 Loblolly pine C Pinus taeda cDNA... 163 3e-038
gb|AW888069.1|AW888069 NXNV_126_H07_F Nsf Xylem Normal wood... 163 3e-038
gb|BX252947.1|BX252947 BX252947 Pinus pinaster differenciat... 161 1e-037
gb|BF778666.1|BF778666 NXSI_090_D08_F NXSI (Nsf Xylem Side ... 161 1e-037
gb|BM427766.1|BM427766 NXRV_003_A06_F NXRV (Nsf Xylem Root ... 161 1e-037
gb|BQ701255.1|BQ701255 NXSI_061_D08_F NXSI (Nsf Xylem Side ... 161 1e-037
gb|CF398102.1|CF398102 RTDS3_21_C08.b1_A022 Drought-stresse... 161 1e-037
gb|CF399422.1|CF399422 RTDS3_28_D06.g1_A022 Drought-stresse... 161 1e-037
gb|DR388680.1|DR388680 RTHG1_29_G06.g1_A029 Roots plus adde... 161 1e-037
gb|BX251949.1|BX251949 BX251949 Pinus pinaster differenciat... 159 4e-037
gb|BX254605.1|BX254605 BX254605 Pinus pinaster differenciat... 157 2e-036
gb|BX254943.1|BX254943 BX254943 Pinus pinaster differenciat... 157 2e-036
gb|DR095332.1|DR095332 STRR1_20_H02.b1_A033 Stem Response R... 157 2e-036
gb|CF395618.1|CF395618 RTDS2_12_H02.g1_A021 Drought-stresse... 155 7e-036
gb|BQ699307.1|BQ699307 NXRV126_A09_F NXRV (Nsf Xylem Root w... 153 3e-035
gb|CO159587.1|CO159587 FLD1_14_B09.g1_A029 Root flooded Pin... 153 3e-035
gb|BG275289.1|BG275289 NXSI_142_A01_F NXSI (Nsf Xylem Side ... 151 1e-034
gb|CX648893.1|CX648893 COLD1_31_D03.g1_A029 Root cold Pinus... 151 1e-034
gb|BG276034.1|BG276034 NXSI_147_H11_F NXSI (Nsf Xylem Side ... 145 7e-033
gb|BG319095.1|BG319095 NXPV_023_F10_F NXPV (Nsf Xylem Plani... 145 7e-033
gb|DR088359.1|DR088359 RTAL1_1_D08.b1_A029 Roots plus added... 145 7e-033
gb|BF221256.1|BF221256 NXCI_156_F01_F NXCI (Nsf Xylem Compr... 143 3e-032
gb|BF609556.1|BF609556 NXSI_046_B06_F NXSI (Nsf Xylem Side ... 143 3e-032
gb|BQ702923.1|BQ702923 NXSI_134_C08_F NXSI (Nsf Xylem Side ... 141 1e-031
gb|CF387165.1|CF387165 RTDR1_11_A09.b1_A015 Loblolly pine r... 141 1e-031
gb|DN614015.1|DN614015 EST967065 Subtracted pine embryo lib... 141 1e-031
gb|DT629014.1|DT629014 EST1155584 Subtracted pine embryo li... 141 1e-031
gb|CF388062.1|CF388062 RTDR1_17_F06.g1_A015 Loblolly pine r... 139 4e-031
gb|CF391909.1|CF391909 RTDR3_10_A12.g1_A022 Loblolly pine r... 139 4e-031
gb|CF667497.1|CF667497 RTCNT1_30_D11.g1_A029 Root control P... 139 4e-031
gb|CF669309.1|CF669309 RTCNT1_42_F10.b1_A029 Root control P... 139 4e-031
gb|CF670337.1|CF670337 RTCNT1_49_C10.g1_A029 Root control P... 139 4e-031
gb|DN454332.1|DN454332 EST950131 Sequencing ESTs from loblo... 139 4e-031
gb|DN456247.1|DN456247 EST952046 Sequencing ESTs from loblo... 139 4e-031
gb|DR016895.1|DR016895 STRS1_12_G05.g1_A034 Shoot tip pitch... 139 4e-031
gb|DR385758.1|DR385758 RTHG1_10_E04.g1_A029 Roots plus adde... 139 4e-031
gb|CF476268.1|CF476268 RTWW2_22_D04.b1_A021 Well-watered lo... 137 2e-030
gb|CF394836.1|CF394836 RTDS2_8_G08.b1_A021 Drought-stressed... 135 7e-030
gb|CF472357.1|CF472357 RTDS1_9_G03.b1_A015 Drought-stressed... 135 7e-030
gb|CF477602.1|CF477602 RTWW3_8_G12.g1_A022 Well-watered lob... 135 7e-030
gb|CF665311.1|CF665311 RTCNT1_15_F02.b1_A029 Root control P... 135 7e-030
gb|DR078405.1|DR078405 RTFEPL1_4_A11.b1_A029 Roots plus add... 135 7e-030
gb|DR094342.1|DR094342 STRR1_14_A07.b1_A033 Stem Response R... 135 7e-030
gb|DR388433.1|DR388433 RTHG1_28_F03.b1_A029 Roots plus adde... 135 7e-030
gb|BE186963.1|BE186963 NXNV_158_G09_F Nsf Xylem Normal wood... 133 3e-029
gb|DN615192.1|DN615192 EST968242 Subtracted pine embryo lib... 133 3e-029
gb|DT629571.1|DT629571 EST1156141 Subtracted pine embryo li... 133 3e-029
gb|BE762259.1|BE762259 NXCI_067_C10_F NXCI (Nsf Xylem Compr... 131 1e-028
gb|BE762275.1|BE762275 NXCI_067_E07_F NXCI (Nsf Xylem Compr... 131 1e-028
gb|BF517288.1|BF517288 NXSI_012_F04_F NXSI (Nsf Xylem Side ... 131 1e-028
gb|CF385486.1|CF385486 RTDR1_4_A06.b1_A015 Loblolly pine ro... 131 1e-028
gb|CO367943.1|CO367943 RTK1_37_D12.g1_A029 Roots minus pota... 131 1e-028
gb|CV035647.1|CV035647 RTNACL1_41_B03.g1_A029 Roots plus ad... 131 1e-028
gb|CV035656.1|CV035656 RTNACL1_41_C03.g1_A029 Roots plus ad... 131 1e-028
gb|CX648414.1|CX648414 COLD1_28_B08.g1_A029 Root cold Pinus... 131 1e-028
gb|DR069698.1|DR069698 RTDK1_8_H09.g1_A029 Roots, dark Pinu... 131 1e-028
gb|DR069823.1|DR069823 RTDK1_9_D10.g1_A029 Roots, dark Pinu... 131 1e-028
gb|DR081652.1|DR081652 RTFEPL1_31_E09.b1_A029 Roots plus ad... 131 1e-028
gb|DR091337.1|DR091337 RTAL1_20_H12.g1_A029 Roots plus adde... 131 1e-028
gb|DR099065.1|DR099065 STRR1_52_H11.b1_A033 Stem Response R... 131 1e-028
gb|DR385406.1|DR385406 RTHG1_8_A11.g1_A029 Roots plus added... 131 1e-028
gb|BE761856.1|BE761856 NXCI_070_F06_F NXCI (Nsf Xylem Compr... 129 4e-028
gb|CF394939.1|CF394939 RTDS2_8_G08.g1_A021 Drought-stressed... 129 4e-028
gb|BI644029.1|BI644029 NXPV_127_B12_F NXPV (Nsf Xylem Plani... 127 2e-027
gb|CF397587.1|CF397587 RTDS3_4_B03.g1_A022 Drought-stressed... 127 2e-027
gb|DR049736.1|DR049736 RTBOR1_18_E10.g1_A029 Roots plus add... 127 2e-027
gb|AH014354.1|SEG_AY764801S Pinus taeda isolate 16 cinnamat... 127 2e-027
gb|AY764801.1|AY764801S1 Pinus taeda isolate 16 cinnamate 4... 127 2e-027
gb|AH014355.1|SEG_AY764805S Pinus taeda isolate 6 cinnamate... 127 2e-027
gb|AY764805.1|AY764805S1 Pinus taeda isolate 6 cinnamate 4-... 127 2e-027
gb|AH014356.1|SEG_AY764809S Pinus taeda isolate 4 cinnamate... 127 2e-027
gb|AY764809.1|AY764809S1 Pinus taeda isolate 4 cinnamate 4-... 127 2e-027
gb|AH014357.1|SEG_AY764813S Pinus taeda isolate 26 cinnamat... 127 2e-027
gb|AY764813.1|AY764813S1 Pinus taeda isolate 26 cinnamate 4... 127 2e-027
gb|AH014358.1|SEG_AY764817S Pinus taeda isolate 9 cinnamate... 127 2e-027
gb|AY764817.1|AY764817S1 Pinus taeda isolate 9 cinnamate 4-... 127 2e-027
gb|AH014359.1|SEG_AY764821S Pinus taeda isolate 23 cinnamat... 127 2e-027
gb|AY764821.1|AY764821S1 Pinus taeda isolate 23 cinnamate 4... 127 2e-027
gb|AH014360.1|SEG_AY764825S Pinus taeda isolate 22 cinnamat... 127 2e-027
gb|AY764825.1|AY764825S1 Pinus taeda isolate 22 cinnamate 4... 127 2e-027
gb|AH014361.1|SEG_AY764829S Pinus taeda isolate 32 cinnamat... 127 2e-027
gb|AY764829.1|AY764829S1 Pinus taeda isolate 32 exon 1 ; an... 127 2e-027
gb|AH014362.1|SEG_AY764833S Pinus taeda isolate 18 cinnamat... 127 2e-027
gb|AY764833.1|AY764833S1 Pinus taeda isolate 18 exon 1 ; an... 127 2e-027
gb|AH014363.1|SEG_AY764837S Pinus taeda isolate 21 cinnamat... 127 2e-027
gb|AY764837.1|AY764837S1 Pinus taeda isolate 21 exon 1 ; an... 127 2e-027
gb|AH014364.1|SEG_AY764841S Pinus taeda isolate 31 cinnamat... 127 2e-027
gb|AY764841.1|AY764841S1 Pinus taeda isolate 31 cinnamate 4... 127 2e-027
gb|AH014365.1|SEG_AY764845S Pinus taeda isolate 5 cinnamate... 127 2e-027
gb|AY764845.1|AY764845S1 Pinus taeda isolate 5 exon 1 ; and... 127 2e-027
gb|AH014366.1|SEG_AY764849S Pinus taeda isolate 15 cinnamat... 127 2e-027
gb|AY764849.1|AY764849S1 Pinus taeda isolate 15 cinnamate 4... 127 2e-027
gb|AH014367.1|SEG_AY764853S Pinus taeda isolate 20 cinnamat... 127 2e-027
gb|AY764853.1|AY764853S1 Pinus taeda isolate 20 cinnamate 4... 127 2e-027
gb|AH014368.1|SEG_AY764857S Pinus taeda isolate 12 cinnamat... 127 2e-027
gb|AY764857.1|AY764857S1 Pinus taeda isolate 12 cinnamate 4... 127 2e-027
gb|AH014369.1|SEG_AY764861S Pinus taeda isolate 24 cinnamat... 127 2e-027
gb|AY764861.1|AY764861S1 Pinus taeda isolate 24 cinnamate 4... 127 2e-027
gb|AH014370.1|SEG_AY764865S Pinus taeda isolate 11 cinnamat... 127 2e-027
gb|AY764865.1|AY764865S1 Pinus taeda isolate 11 cinnamate 4... 127 2e-027
gb|AH014371.1|SEG_AY764869S Pinus taeda isolate 7 cinnamate... 127 2e-027
gb|AY764869.1|AY764869S1 Pinus taeda isolate 7 cinnamate 4-... 127 2e-027
gb|AH014372.1|SEG_AY764873S Pinus taeda isolate 25 cinnamat... 127 2e-027
gb|AY764873.1|AY764873S1 Pinus taeda isolate 25 cinnamate 4... 127 2e-027
gb|AH014373.1|SEG_AY764877S Pinus taeda isolate 13 cinnamat... 127 2e-027
gb|AY764877.1|AY764877S1 Pinus taeda isolate 13 cinnamate 4... 127 2e-027
gb|AH014374.1|SEG_AY764881S Pinus taeda isolate 30 cinnamat... 127 2e-027
gb|AY764881.1|AY764881S1 Pinus taeda isolate 30 cinnamate 4... 127 2e-027
gb|AH014375.1|SEG_AY764885S Pinus taeda isolate 14 cinnamat... 127 2e-027
gb|AY764885.1|AY764885S1 Pinus taeda isolate 14 cinnamate 4... 127 2e-027
gb|AH014376.1|SEG_AY764889S Pinus taeda isolate 10 cinnamat... 127 2e-027
gb|AY764889.1|AY764889S1 Pinus taeda isolate 10 cinnamate 4... 127 2e-027
gb|AH014377.1|SEG_AY764893S Pinus taeda isolate 2 cinnamate... 127 2e-027
gb|AY764893.1|AY764893S1 Pinus taeda isolate 2 cinnamate 4-... 127 2e-027
gb|AH014378.1|SEG_AY764897S Pinus taeda isolate 3 cinnamate... 127 2e-027
gb|AY764897.1|AY764897S1 Pinus taeda isolate 3 cinnamate 4-... 127 2e-027
gb|AH014379.1|SEG_AY764901S Pinus taeda isolate 19 cinnamat... 127 2e-027
gb|AY764901.1|AY764901S1 Pinus taeda isolate 19 cinnamate 4... 127 2e-027
gb|AH014380.1|SEG_AY764905S Pinus taeda isolate 28 cinnamat... 127 2e-027
gb|AY764905.1|AY764905S1 Pinus taeda isolate 28 cinnamate 4... 127 2e-027
gb|AH014381.1|SEG_AY764909S Pinus taeda isolate 8 cinnamate... 127 2e-027
gb|AY764909.1|AY764909S1 Pinus taeda isolate 8 cinnamate 4-... 127 2e-027
gb|AH014382.1|SEG_AY764913S Pinus taeda isolate 17 cinnamat... 127 2e-027
gb|AY764913.1|AY764913S1 Pinus taeda isolate 17 cinnamate 4... 127 2e-027
gb|AH014383.1|SEG_AY764917S Pinus taeda isolate 1 cinnamate... 127 2e-027
gb|AY764917.1|AY764917S1 Pinus taeda isolate 1 cinnamate 4-... 127 2e-027
gb|AH014384.1|SEG_AY764921S Pinus taeda isolate 29 cinnamat... 127 2e-027
gb|AY764921.1|AY764921S1 Pinus taeda isolate 29 cinnamate 4... 127 2e-027
gb|AH014385.1|SEG_AY764925S Pinus taeda isolate 27 cinnamat... 127 2e-027
gb|AY764925.1|AY764925S1 Pinus taeda isolate 27 cinnamate 4... 127 2e-027
gb|BF610527.1|BF610527 NXSI_059_F06_F NXSI (Nsf Xylem Side ... 125 6e-027
gb|BQ701829.1|BQ701829 NXSI_121_A07_F NXSI (Nsf Xylem Side ... 125 6e-027
gb|BX678712.1|BX678712 BX678712 RS Pinus pinaster cDNA clon... 125 6e-027
gb|BX249390.1|BX249390 BX249390 Pinus pinaster differenciat... 123 2e-026
gb|BX254757.1|BX254757 BX254757 Pinus pinaster differenciat... 123 2e-026
gb|BX254922.1|BX254922 BX254922 Pinus pinaster differenciat... 123 2e-026
gb|CF670152.1|CF670152 RTCNT1_48_A01.g1_A029 Root control P... 123 2e-026
dbj|BD224278.1| Materials and methods for the modification ... 123 2e-026
dbj|BD224368.1| Materials and methods for the modification ... 123 2e-026
gb|CF385572.1|CF385572 RTDR1_4_A06.g1_A015 Loblolly pine ro... 119 4e-025
gb|CO166855.1|CO166855 FLD1_65_B06.b1_A029 Root flooded Pin... 119 4e-025
gb|BF186455.1|BF186455 NXCI_137_F12_F NXCI (Nsf Xylem Compr... 117 2e-024
gb|BQ290684.1|BQ290684 NXRV048_D03_F NXRV (Nsf Xylem Root w... 117 2e-024
gb|CF472453.1|CF472453 RTDS1_9_G03.g1_A015 Drought-stressed... 117 2e-024
gb|DR016415.1|DR016415 STRS1_10_A08.b1_A034 Shoot tip pitch... 117 2e-024
gb|DR178124.1|DR178124 RTMNUT1_9_B04.g1_A029 Roots minus mi... 117 2e-024
gb|CF387668.1|CF387668 RTDR1_19_A10.b1_A015 Loblolly pine r... 115 6e-024
gb|CF395347.1|CF395347 RTDS2_11_B10.b1_A021 Drought-stresse... 115 6e-024
gb|CF401106.1|CF401106 RTWW1_10_F06.b1_A015 Well-watered lo... 115 6e-024
gb|CX649036.1|CX649036 COLD1_32_B09.g1_A029 Root cold Pinus... 115 6e-024
gb|DR016492.1|DR016492 STRS1_10_A08.g1_A034 Shoot tip pitch... 115 6e-024
gb|DR098077.1|DR098077 STRR1_39_A09.b1_A033 Stem Response R... 115 6e-024
gb|BE241204.1|BE241204 NXNV_180_D03_F Nsf Xylem Normal wood... 113 2e-023
gb|BF609865.1|BF609865 NXSI_051_H12_F NXSI (Nsf Xylem Side ... 113 2e-023
gb|AW758584.1|AW758584 NXNV_075_B10_F Nsf Xylem Normal wood... 111 1e-022
gb|CD020765.1|CD020765 NXNV_075_B08_F Nsf Xylem Normal wood... 111 1e-022
gb|CF476197.1|CF476197 RTWW2_21_B01.g1_A021 Well-watered lo... 111 1e-022
gb|BQ702116.1|BQ702116 NXSI_125_B04_F NXSI (Nsf Xylem Side ... 109 4e-022
gb|DN455881.1|DN455881 EST951680 Sequencing ESTs from loblo... 109 4e-022
gb|BE458069.1|BE458069 NXCI_005_E12_F NXCI (Nsf Xylem Compr... 107 1e-021
gb|CF473488.1|CF473488 RTWW2_3_G09.b2_A021 Well-watered lob... 107 1e-021
gb|AI812674.1|AI812674 17G2 Pine Lambda Zap Xylem library P... 105 6e-021
gb|BF609785.1|BF609785 NXSI_050_D04_F NXSI (Nsf Xylem Side ... 105 6e-021
gb|BG275633.1|BG275633 NXSI_144_B02_F NXSI (Nsf Xylem Side ... 105 6e-021
gb|BX252751.1|BX252751 BX252751 Pinus pinaster differenciat... 101 9e-020
gb|CD021604.1|CD021604 NXNV_156_C06_F Nsf Xylem Normal wood... 101 9e-020
gb|CF387404.1|CF387404 RTDR1_12_C07.g1_A015 Loblolly pine r... 101 9e-020
gb|CF387868.1|CF387868 RTDR1_18_A04.g1_A015 Loblolly pine r... 101 9e-020
gb|CF400054.1|CF400054 RTWW1_2_F08.g1_A015 Well-watered lob... 101 9e-020
gb|CF401119.1|CF401119 RTWW1_10_E09.b1_A015 Well-watered lo... 101 9e-020
gb|CF401623.1|CF401623 RTWW1_13_H09.g1_A015 Well-watered lo... 101 9e-020
gb|CF402320.1|CF402320 RTWW1_19_F11.g1_A015 Well-watered lo... 101 9e-020
gb|CF470397.1|CF470397 RTDS1_17_C04.b1_A015 Drought-stresse... 101 9e-020
gb|CF470644.1|CF470644 RTDS1_13_G10.g1_A015 Drought-stresse... 101 9e-020
gb|CF477753.1|CF477753 RTWW3_9_C03.g1_A022 Well-watered lob... 101 9e-020
gb|CF667804.1|CF667804 RTCNT1_32_D04.g1_A029 Root control P... 101 9e-020
gb|CF670072.1|CF670072 RTCNT1_48_A01.b1_A029 Root control P... 101 9e-020
gb|CF671508.1|CF671508 RTCNT1_57_C07.g1_A029 Root control P... 101 9e-020
gb|CF672794.1|CF672794 RTCNT1_74_B01.b1_A029 Root control P... 101 9e-020
gb|CO159507.1|CO159507 FLD1_14_B09.b1_A029 Root flooded Pin... 101 9e-020
gb|DT625214.1|DT625214 EST1159489 Sequencing ESTs from lobl... 101 9e-020
gb|AY764803.1|AY764801S3 Pinus taeda isolate 16 cinnamate 4... 101 9e-020
gb|AY764807.1|AY764805S3 Pinus taeda isolate 6 cinnamate 4-... 101 9e-020
gb|AY764811.1|AY764809S3 Pinus taeda isolate 4 cinnamate 4-... 101 9e-020
gb|AY764815.1|AY764813S3 Pinus taeda isolate 26 cinnamate 4... 101 9e-020
gb|AY764819.1|AY764817S3 Pinus taeda isolate 9 cinnamate 4-... 101 9e-020
gb|AY764823.1|AY764821S3 Pinus taeda isolate 23 cinnamate 4... 101 9e-020
gb|AY764827.1|AY764825S3 Pinus taeda isolate 22 cinnamate 4... 101 9e-020
gb|AY764831.1|AY764829S3 Pinus taeda isolate 32 cinnamate 4... 101 9e-020
gb|AY764835.1|AY764833S3 Pinus taeda isolate 18 cinnamate 4... 101 9e-020
gb|AY764839.1|AY764837S3 Pinus taeda isolate 21 cinnamate 4... 101 9e-020
gb|AY764843.1|AY764841S3 Pinus taeda isolate 31 cinnamate 4... 101 9e-020
gb|AY764847.1|AY764845S3 Pinus taeda isolate 5 cinnamate 4-... 101 9e-020
gb|AY764851.1|AY764849S3 Pinus taeda isolate 15 cinnamate 4... 101 9e-020
gb|AY764855.1|AY764853S3 Pinus taeda isolate 20 cinnamate 4... 101 9e-020
gb|AY764859.1|AY764857S3 Pinus taeda isolate 12 cinnamate 4... 101 9e-020
gb|AY764863.1|AY764861S3 Pinus taeda isolate 24 cinnamate 4... 101 9e-020
gb|AY764867.1|AY764865S3 Pinus taeda isolate 11 cinnamate 4... 101 9e-020
gb|AY764871.1|AY764869S3 Pinus taeda isolate 7 cinnamate 4-... 101 9e-020
gb|AY764875.1|AY764873S3 Pinus taeda isolate 25 cinnamate 4... 101 9e-020
gb|AY764879.1|AY764877S3 Pinus taeda isolate 13 cinnamate 4... 101 9e-020
gb|AY764883.1|AY764881S3 Pinus taeda isolate 30 cinnamate 4... 101 9e-020
gb|AY764887.1|AY764885S3 Pinus taeda isolate 14 cinnamate 4... 101 9e-020
gb|AY764891.1|AY764889S3 Pinus taeda isolate 10 cinnamate 4... 101 9e-020
gb|AY764895.1|AY764893S3 Pinus taeda isolate 2 cinnamate 4-... 101 9e-020
gb|AY764899.1|AY764897S3 Pinus taeda isolate 3 cinnamate 4-... 101 9e-020
gb|AY764903.1|AY764901S3 Pinus taeda isolate 19 cinnamate 4... 101 9e-020
gb|AY764907.1|AY764905S3 Pinus taeda isolate 28 cinnamate 4... 101 9e-020
gb|AY764911.1|AY764909S3 Pinus taeda isolate 8 cinnamate 4-... 101 9e-020
gb|AY764915.1|AY764913S3 Pinus taeda isolate 17 cinnamate 4... 101 9e-020
gb|AY764919.1|AY764917S3 Pinus taeda isolate 1 cinnamate 4-... 101 9e-020
gb|AY764923.1|AY764921S3 Pinus taeda isolate 29 cinnamate 4... 101 9e-020
gb|AY764927.1|AY764925S3 Pinus taeda isolate 27 cinnamate 4... 101 9e-020
gb|DR386950.1|DR386950 RTHG1_18_A04.g1_A029 Roots plus adde... 100 4e-019
gb|CF402889.1|CF402889 RTWW1_23_D03.g1_A015 Well-watered lo... 98 1e-018
gb|BQ699081.1|BQ699081 NXRV119_C01_F NXRV (Nsf Xylem Root w... 96 6e-018
gb|CF473580.1|CF473580 RTWW2_3_G09.g1_A021 Well-watered lob... 96 6e-018
gb|CF474252.1|CF474252 RTWW2_17_C11.g1_A021 Well-watered lo... 96 6e-018
gb|CF477371.1|CF477371 RTWW3_7_H02.b1_A022 Well-watered lob... 96 6e-018
gb|CO413403.1|CO413403 EST843788 Sequencing ESTs from loblo... 96 6e-018
gb|DR683978.1|DR683978 EST1074054 Normalized pine embryo li... 96 6e-018
gb|BX252744.1|BX252744 BX252744 Pinus pinaster differenciat... 94 2e-017
gb|CD016854.1|CD016854 NXCI_062_C09_F NXCI (Nsf Xylem Compr... 94 2e-017
gb|CF387741.1|CF387741 RTDR1_19_A10.g1_A015 Loblolly pine r... 94 2e-017
gb|CF396545.1|CF396545 RTDS2_22_E05.g1_A021 Drought-stresse... 94 2e-017
gb|CO165865.1|CO165865 FLD1_57_E01.g1_A029 Root flooded Pin... 94 2e-017
gb|CV146907.1|CV146907 EST858116 Sequencing ESTs from loblo... 94 2e-017
gb|CX652948.1|CX652948 COLD1_62_B02.g1_A029 Root cold Pinus... 94 2e-017
gb|DR098329.1|DR098329 STRR1_40_E06.g1_A033 Stem Response R... 94 2e-017
gb|DR099765.1|DR099765 STRR1_58_G09.b1_A033 Stem Response R... 94 2e-017
gb|CF398799.1|CF398799 RTDS3_16_E11.b1_A022 Drought-stresse... 92 9e-017
gb|CX648959.1|CX648959 COLD1_32_B09.b1_A029 Root cold Pinus... 92 9e-017
gb|CF397305.1|CF397305 RTDS3_2_F01.g1_A022 Drought-stressed... 90 4e-016
gb|CF479268.1|CF479268 RTWW3_23_E07.b1_A022 Well-watered lo... 90 4e-016
gb|CF389425.1|CF389425 RTDR2_7_E10.g1_A021 Loblolly pine ro... 88 1e-015
gb|CO198126.1|CO198126 GEO1_11_A08.g1_A029 Root gravitropis... 86 6e-015
gb|DR077974.1|DR077974 RTFEPL1_1_D06.b1_A029 Roots plus add... 86 6e-015
gb|CF390012.1|CF390012 RTDR2_11_H02.g1_A021 Loblolly pine r... 84 2e-014
gb|DR743926.1|DR743926 RTCU1_19_C07.b1_A029 Roots plus adde... 84 2e-014
gb|CF476104.1|CF476104 RTWW2_21_H07.b1_A021 Well-watered lo... 82 9e-014
gb|CV137192.1|CV137192 EST848401 Sequencing ESTs from loblo... 82 9e-014
gb|DR743784.1|DR743784 RTCU1_18_D07.b1_A029 Roots plus adde... 82 9e-014
gb|BX251017.1|BX251017 BX251017 Pinus pinaster differenciat... 80 3e-013
gb|BE997078.1|BE997078 NXCI_098_F08_F NXCI (Nsf Xylem Compr... 80 3e-013
gb|BF060586.1|BF060586 NXCI_117_C04_F NXCI (Nsf Xylem Compr... 80 3e-013
gb|CF393821.1|CF393821 RTDS2_1_E11.g1_A021 Drought-stressed... 80 3e-013
gb|CF478231.1|CF478231 RTWW3_19_B02.g1_A022 Well-watered lo... 80 3e-013
gb|CF478379.1|CF478379 RTWW3_18_E03.g1_A022 Well-watered lo... 80 3e-013
gb|BX678013.1|BX678013 BX678013 RN Pinus pinaster cDNA clon... 80 3e-013
gb|CR354679.1|CR354679 CR354679 Pinus pinaster differenciat... 80 3e-013
gb|CN784142.1|CN784142 EST782833 Sequencing ESTs from loblo... 80 3e-013
gb|CO158342.1|CO158342 FLD1_6_G03.b1_A029 Root flooded Pinu... 80 3e-013
gb|CO165799.1|CO165799 FLD1_57_E01.b1_A029 Root flooded Pin... 80 3e-013
gb|CO410556.1|CO410556 EST840941 Sequencing ESTs from loblo... 80 3e-013
gb|CO412560.1|CO412560 EST842945 Sequencing ESTs from loblo... 80 3e-013
gb|CO364291.1|CO364291 RTK1_14_G10.g1_A029 Roots minus pota... 80 3e-013
gb|CX715394.1|CX715394 RTPQ1_33_H02.g1_A032 Roots treated w... 80 3e-013
gb|DN449749.1|DN449749 EST945548 Sequencing ESTs from loblo... 80 3e-013
gb|DN449945.1|DN449945 EST945744 Sequencing ESTs from loblo... 80 3e-013
gb|DN455811.1|DN455811 EST951610 Sequencing ESTs from loblo... 80 3e-013
gb|DN456679.1|DN456679 EST952478 Sequencing ESTs from loblo... 80 3e-013
gb|DN465027.1|DN465027 EST960826 Sequencing ESTs from loblo... 80 3e-013
gb|DR014011.1|DR014011 HEAT1_22_H03.g1_A029 Root at 37 C fo... 80 3e-013
gb|DR022327.1|DR022327 STRS1_50_G11.b1_A034 Shoot tip pitch... 80 3e-013
gb|DR024815.1|DR024815 STRS1_67_D06.g1_A034 Shoot tip pitch... 80 3e-013
gb|DR047818.1|DR047818 RTBOR1_3_F06.g1_A029 Roots plus adde... 80 3e-013
gb|DR089050.1|DR089050 RTAL1_6_F04.b1_A029 Roots plus added... 80 3e-013
gb|DR089135.1|DR089135 RTAL1_6_F04.g1_A029 Roots plus added... 80 3e-013
gb|DR097814.1|DR097814 STRR1_37_E08.b1_A033 Stem Response R... 80 3e-013
gb|DR097886.1|DR097886 STRR1_37_E08.g1_A033 Stem Response R... 80 3e-013
gb|DR100503.1|DR100503 STRR1_64_D06.g1_A033 Stem Response R... 80 3e-013
gb|DR101946.1|DR101946 STRR1_76_H05.g1_A033 Stem Response R... 80 3e-013
gb|DR117513.1|DR117513 RTMG1_7_A05.g1_A029 Roots minus magn... 80 3e-013
gb|DR385683.1|DR385683 RTHG1_10_E04.b1_A029 Roots plus adde... 80 3e-013
gb|DT625816.1|DT625816 EST1157740 Sequencing ESTs from lobl... 80 3e-013
gb|AY670364.1| Pinus taeda isolate 4 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670365.1| Pinus taeda isolate 26 trans-cinnamate 4-hyd... 80 3e-013
gb|AY670369.1| Pinus taeda isolate 32 trans-cinnamate 4-hyd... 80 3e-013
gb|AY670373.1| Pinus taeda isolate 31 trans-cinnamate 4-hyd... 80 3e-013
gb|AY670374.1| Pinus taeda isolate 5 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670378.1| Pinus taeda isolate 11 trans-cinnamate 4-hyd... 80 3e-013
gb|AY670379.1| Pinus taeda isolate 7 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670385.1| Pinus taeda isolate 2 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670386.1| Pinus taeda isolate 3 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670387.1| Pinus taeda isolate 19 trans-cinnamate 4-hyd... 80 3e-013
gb|AY670389.1| Pinus taeda isolate 8 trans-cinnamate 4-hydr... 80 3e-013
gb|AY670392.1| Pinus taeda isolate 29 trans-cinnamate 4-hyd... 80 3e-013
gb|CD022968.1|CD022968 NXPV_097_D04_F NXPV (Nsf Xylem Plani... 76 5e-012
gb|CO171166.1|CO171166 NDL1_19_D03.g1_A029 Needles control ... 76 5e-012
gb|DR017352.1|DR017352 STRS1_15_F03.g1_A034 Shoot tip pitch... 76 5e-012
gb|DR024734.1|DR024734 STRS1_67_D06.b1_A034 Shoot tip pitch... 76 5e-012
gb|AW290693.1|AW290693 NXNV045D12F Nsf Xylem Normal wood Ve... 74 2e-011
gb|CD027355.1|CD027355 NXNV045D12 Nsf Xylem Normal wood Ver... 74 2e-011
gb|CF392486.1|CF392486 RTDR3_6_E04.b1_A022 Loblolly pine ro... 74 2e-011
gb|CF476554.1|CF476554 RTWW3_2_B01.b1_A022 Well-watered lob... 74 2e-011
gb|BE187217.1|BE187217 NXNV_160_G02_F Nsf Xylem Normal wood... 72 8e-011
gb|BE187218.1|BE187218 NXNV_160_G03_F Nsf Xylem Normal wood... 72 8e-011
gb|BE643912.1|BE643912 NXCI_048_H09_F NXCI (Nsf Xylem Compr... 72 8e-011
gb|BE996954.1|BE996954 NXCI_093_B07_F NXCI (Nsf Xylem Compr... 72 8e-011
gb|BQ700232.1|BQ700232 NXRV103_A02_F NXRV (Nsf Xylem Root w... 72 8e-011
gb|CF387928.1|CF387928 RTDR1_17_F06.b1_A015 Loblolly pine r... 72 8e-011
gb|CF399964.1|CF399964 RTWW1_2_F08.b1_A015 Well-watered lob... 72 8e-011
gb|CF471814.1|CF471814 RTDS1_6_C12.g1_A015 Drought-stressed... 72 8e-011
gb|CF472578.1|CF472578 RTDS1_10_F09.g1_A015 Drought-stresse... 72 8e-011
gb|CF476072.1|CF476072 RTWW2_16_C01.g1_A021 Well-watered lo... 72 8e-011
gb|CF478190.1|CF478190 RTWW3_19_H01.g1_A022 Well-watered lo... 72 8e-011
gb|CF478212.1|CF478212 RTWW3_19_H02.g1_A022 Well-watered lo... 72 8e-011
gb|CF666477.1|CF666477 RTCNT1_23_C09.g1_A029 Root control P... 72 8e-011
gb|CO166924.1|CO166924 FLD1_65_B06.g1_A029 Root flooded Pin... 72 8e-011
gb|CO170915.1|CO170915 NDL1_17_G01.g1_A029 Needles control ... 72 8e-011
gb|CO173509.1|CO173509 NDL1_36_D11.g1_A029 Needles control ... 72 8e-011
gb|CO198271.1|CO198271 GEO1_12_B07.g1_A029 Root gravitropis... 72 8e-011
gb|CO367375.1|CO367375 RTK1_33_H10.g1_A029 Roots minus pota... 72 8e-011
gb|CX650793.1|CX650793 COLD1_48_D10.b1_A029 Root cold Pinus... 72 8e-011
gb|CX650872.1|CX650872 COLD1_48_D10.g1_A029 Root cold Pinus... 72 8e-011
gb|CX714349.1|CX714349 RTPQ1_20_G01.g1_A032 Roots treated w... 72 8e-011
gb|DR097090.1|DR097090 STRR1_32_A04.g1_A033 Stem Response R... 72 8e-011
gb|DR102377.1|DR102377 STRR1_80_E01.g1_A033 Stem Response R... 72 8e-011
gb|AY670362.1| Pinus taeda isolate 16 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670363.1| Pinus taeda isolate 6 trans-cinnamate 4-hydr... 72 8e-011
gb|AY670366.1| Pinus taeda isolate 9 trans-cinnamate 4-hydr... 72 8e-011
gb|AY670367.1| Pinus taeda isolate 23 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670368.1| Pinus taeda isolate 22 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670370.1| Pinus taeda isolate 12 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670371.1| Pinus taeda isolate 18 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670372.1| Pinus taeda isolate 21 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670375.1| Pinus taeda isolate 15 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670376.1| Pinus taeda isolate 20 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670377.1| Pinus taeda isolate 24 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670380.1| Pinus taeda isolate 25 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670381.1| Pinus taeda isolate 13 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670382.1| Pinus taeda isolate 30 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670383.1| Pinus taeda isolate 14 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670384.1| Pinus taeda isolate 10 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670388.1| Pinus taeda isolate 28 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670390.1| Pinus taeda isolate 17 trans-cinnamate 4-hyd... 72 8e-011
gb|AY670391.1| Pinus taeda isolate 1 trans-cinnamate 4-hydr... 72 8e-011
gb|AY670393.1| Pinus taeda isolate 27 trans-cinnamate 4-hyd... 72 8e-011
gb|BE643861.1|BE643861 NXCI_048_C02_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BE762045.1|BE762045 NXCI_076_D03_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BE762243.1|BE762243 NXCI_083_H11_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BE997017.1|BE997017 NXCI_097_F09_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BF049831.1|BF049831 NXCI_111_E01_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BF169900.1|BF169900 NXCI_127_G11_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BF609655.1|BF609655 NXSI_047_G02_F NXSI (Nsf Xylem Side ... 70 3e-010
gb|CF385565.1|CF385565 RTDR1_4_A02.g1_A015 Loblolly pine ro... 70 3e-010
gb|CF402941.1|CF402941 RTWW1_23_C03.g1_A015 Well-watered lo... 70 3e-010
gb|CF471924.1|CF471924 RTDS1_7_G12.g1_A015 Drought-stressed... 70 3e-010
gb|CF474751.1|CF474751 RTWW2_7_D12.g1_A021 Well-watered lob... 70 3e-010
gb|CF665390.1|CF665390 RTCNT1_15_F02.g1_A029 Root control P... 70 3e-010
gb|DR098151.1|DR098151 STRR1_39_A09.g1_A033 Stem Response R... 70 3e-010
gb|DR388516.1|DR388516 RTHG1_28_F03.g1_A029 Roots plus adde... 70 3e-010
gb|BF518351.1|BF518351 NXSI_038_D05_F NXSI (Nsf Xylem Side ... 68 1e-009
gb|BG275454.1|BG275454 NXSI_139_A03_F NXSI (Nsf Xylem Side ... 68 1e-009
gb|CO367289.1|CO367289 RTK1_33_H10.b1_A029 Roots minus pota... 68 1e-009
gb|DR053547.1|DR053547 RTCA1_11_G10.g1_A029 Roots minus cal... 66 5e-009
gb|DR015432.1|DR015432 STRS1_3_B04.g1_A034 Shoot tip pitch ... 64 2e-008
gb|AI812813.1|AI812813 19E5 Pine Lambda Zap Xylem library P... 62 8e-008
gb|BX255059.1|BX255059 BX255059 Pinus pinaster differenciat... 62 8e-008
gb|BF049652.1|BF049652 NXCI_108_F05_F NXCI (Nsf Xylem Compr... 62 8e-008
gb|BF220551.1|BF220551 NXCI_148_D07_F NXCI (Nsf Xylem Compr... 62 8e-008
gb|CD025167.1|CD025167 NXSI_025_B09_F NXSI (Nsf Xylem Side ... 62 8e-008
gb|CO175438.1|CO175438 NDL1_54_F03.g1_A029 Needles control ... 62 8e-008
gb|CO198441.1|CO198441 GEO1_13_E11.g1_A029 Root gravitropis... 60 3e-007
gb|AW290771.1|AW290771 NXNV046G04F Nsf Xylem Normal wood Ve... 58 1e-006
gb|BF049678.1|BF049678 NXCI_109_C08_F NXCI (Nsf Xylem Compr... 58 1e-006
gb|CD027435.1|CD027435 NXNV046G04 Nsf Xylem Normal wood Ver... 58 1e-006
gb|CF474204.1|CF474204 RTWW2_17_C11.b1_A021 Well-watered lo... 58 1e-006
gb|BE209291.1|BE209291 NXNV_165_H05_F Nsf Xylem Normal wood... 56 5e-006
gb|BE656771.1|BE656771 NXCI_056_F12_F NXCI (Nsf Xylem Compr... 56 5e-006
gb|BF610369.1|BF610369 NXSI_049_E11_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|CD024164.1|CD024164 NXRV_034_H10_F NXRV (Nsf Xylem Root ... 54 2e-005
gb|CF385356.1|CF385356 RTDR1_3_A03.g1_A015 Loblolly pine ro... 54 2e-005
gb|CF388060.1|CF388060 RTDR1_17_B12.g1_A015 Loblolly pine r... 54 2e-005
gb|DR053536.1|DR053536 RTCA1_11_F10.g1_A029 Roots minus cal... 54 2e-005
gb|DR079331.1|DR079331 RTFEPL1_10_C11.g1_A029 Roots plus ad... 54 2e-005
gb|DR166133.1|DR166133 RTPHOS1_9_E01.g2_A029 Roots minus ph... 54 2e-005
gb|BG275390.1|BG275390 NXSI_141_C04_F NXSI (Nsf Xylem Side ... 52 8e-005
gb|BX676842.1|BX676842 BX676842 RN Pinus pinaster cDNA clon... 48 0.001
gb|AY764870.1|AY764869S2 Pinus taeda isolate 7 cinnamate 4-... 48 0.001
gb|AY764874.1|AY764873S2 Pinus taeda isolate 25 cinnamate 4... 48 0.001
gb|AY764882.1|AY764881S2 Pinus taeda isolate 30 cinnamate 4... 48 0.001
gb|BE758686.1|BE758686 NXCI_062_D10_F NXCI (Nsf Xylem Compr... 46 0.005
gb|CD025384.1|CD025384 NXSI_050_E07_F NXSI (Nsf Xylem Side ... 46 0.005
gb|BE452086.1|BE452086 NXCI_009_E02_F NXCI (Nsf Xylem Compr... 44 0.019
gb|BE496441.1|BE496441 NXCI_018_B06_F NXCI (Nsf Xylem Compr... 44 0.019
gb|BF010655.1|BF010655 NXCI_087_F07_F NXCI (Nsf Xylem Compr... 44 0.019
>gb|BE187484.1|BE187484 NXNV_98_G10_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_98_G10 5' similar to Arabidopsis thaliana sequence
At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 614
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 24 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 83
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 84 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 143
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 144 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 203
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 204 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 263
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 264 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 323
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 324 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 383
Query: 1502 gggcag 1507
||||||
Sbjct: 384 gggcag 389
>gb|CF395486.1|CF395486 RTDS2_11_B10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_B10_A021 5', mRNA sequence
Length = 741
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 57 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 116
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 117 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 176
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 177 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 236
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 237 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 296
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 297 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 356
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 357 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 416
Query: 1502 gggcag 1507
||||||
Sbjct: 417 gggcag 422
>gb|CF399839.1|CF399839 RTWW1_1_H11.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_1_H11_A015 5', mRNA sequence
Length = 817
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 328 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 387
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 388 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 447
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 448 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 507
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 508 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 567
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 568 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 627
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 628 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 687
Query: 1502 gggcag 1507
||||||
Sbjct: 688 gggcag 693
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 159 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 218
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 219 aatagcggagctggtgaaccacc 241
>gb|CF400053.1|CF400053 RTWW1_2_B07.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_2_B07_A015 5', mRNA sequence
Length = 701
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 242 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 301
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 302 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 361
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 362 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 421
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 422 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 481
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 482 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 541
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 542 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 601
Query: 1502 gggcag 1507
||||||
Sbjct: 602 gggcag 607
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 73 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 132
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 133 aatagcggagctggtgaaccacc 155
>gb|CF401178.1|CF401178 RTWW1_10_F06.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_10_F06_A015 5', mRNA sequence
Length = 753
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 321 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 380
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 381 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 440
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 441 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 500
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 501 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 560
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 561 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 620
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 621 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 680
Query: 1502 gggcag 1507
||||||
Sbjct: 681 gggcag 686
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 152 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 211
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 212 aatagcggagctggtgaaccacc 234
>gb|CF402326.1|CF402326 RTWW1_19_E10.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_19_E10_A015 5', mRNA sequence
Length = 799
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 242 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 301
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 302 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 361
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 362 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 421
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 422 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 481
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 482 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 541
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 542 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 601
Query: 1502 gggcag 1507
||||||
Sbjct: 602 gggcag 607
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 73 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 132
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 133 aatagcggagctggtgaaccacc 155
>gb|CF476223.1|CF476223 RTWW2_21_H07.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_21_H07_A021 5', mRNA sequence
Length = 682
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 603 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 544
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 543 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 484
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 483 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 424
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 423 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 364
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 363 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 304
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 303 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 244
Query: 1502 gggcag 1507
||||||
Sbjct: 243 gggcag 238
>gb|CF477426.1|CF477426 RTWW3_7_H02.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_7_H02_A022 5', mRNA sequence
Length = 742
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 264 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 323
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 324 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 383
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 384 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 443
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 444 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 503
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 504 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 563
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 564 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 623
Query: 1502 gggcag 1507
||||||
Sbjct: 624 gggcag 629
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 95 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 154
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 155 aatagcggagctggtgaaccacc 177
>gb|CF664576.1|CF664576 RTCNT1_10_E07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_10_E07_A029 5', mRNA sequence
Length = 722
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 648 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 589
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 588 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 529
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 528 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 469
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 468 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 409
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 408 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 349
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 348 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 289
Query: 1502 gggcag 1507
||||||
Sbjct: 288 gggcag 283
>gb|CO158422.1|CO158422 FLD1_6_G03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_G03_A029 5', mRNA sequence
Length = 754
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 196 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 255
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 256 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 315
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 316 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 375
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 376 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 435
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 436 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 495
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 496 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 555
Query: 1502 gggcag 1507
||||||
Sbjct: 556 gggcag 561
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 27 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 86
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 87 aatagcggagctggtgaaccacc 109
>gb|CO161408.1|CO161408 FLD1_28_D03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_D03_A029 5', mRNA sequence
Length = 882
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 228 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 287
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 288 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 347
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 348 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 407
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 408 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 467
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 468 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 527
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 528 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 587
Query: 1502 gggcag 1507
||||||
Sbjct: 588 gggcag 593
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 59 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 118
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 119 aatagcggagctggtgaaccacc 141
>gb|CO172000.1|CO172000 NDL1_26_H11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_26_H11_A029 3', mRNA sequence
Length = 752
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 121 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 180
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 181 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 240
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 241 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 300
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 301 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 360
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 361 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 420
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 421 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 480
Query: 1502 gggcag 1507
||||||
Sbjct: 481 gggcag 486
>gb|CO199878.1|CO199878 GEO2_4_C04.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_4_C04_A032 3', mRNA sequence
Length = 885
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 155 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 214
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 215 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 274
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 275 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 334
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 335 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 394
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 395 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 454
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 455 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 514
Query: 1502 gggcag 1507
||||||
Sbjct: 515 gggcag 520
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 989 aacgttgcagcgatcgagaccacgctgtggtcgat 1023
||||||||||| || ||||| ||||||||||||||
Sbjct: 3 aacgttgcagcaattgagacaacgctgtggtcgat 37
>gb|CO199955.1|CO199955 GEO2_4_C04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_4_C04_A032 5', mRNA sequence
Length = 751
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 203 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 262
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 263 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 322
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 323 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 382
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 383 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 442
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 443 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 502
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 503 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 562
Query: 1502 gggcag 1507
||||||
Sbjct: 563 gggcag 568
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 34 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 93
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 94 aatagcggagctggtgaaccacc 116
>gb|CO368135.1|CO368135 RTK1_38_G08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_38_G08_A029 5', mRNA sequence
Length = 857
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 619 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 560
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 559 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 500
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 499 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 440
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 439 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 380
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 379 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 320
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 319 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 260
Query: 1502 gggcag 1507
||||||
Sbjct: 259 gggcag 254
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 788 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 729
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 728 aatagcggagctggtgaaccacc 706
>gb|CO369202.1|CO369202 RTK1_45_D02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_45_D02_A029 5', mRNA sequence
Length = 775
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 663 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 604
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 603 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 544
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 543 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 484
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 483 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 424
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 423 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 364
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 363 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 304
Query: 1502 gggcag 1507
||||||
Sbjct: 303 gggcag 298
>gb|CV032008.1|CV032008 RTNACL1_5_D05.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_5_D05_A029 3', mRNA sequence
Length = 828
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 170 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 229
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 230 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 289
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 290 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 349
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 350 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 409
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 410 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 469
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 470 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 529
Query: 1502 gggcag 1507
||||||
Sbjct: 530 gggcag 535
Score = 62.0 bits (31), Expect = 8e-008
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgat 1023
|||||| |||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 2 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgat 52
>gb|CX645269.1|CX645269 COLD1_1_C08.g1_A029 Root cold Pinus taeda cDNA clone COLD1_1_C08_A029
5', mRNA sequence
Length = 781
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 602 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 543
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 542 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 483
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 482 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 423
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 422 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 363
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 362 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 303
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 302 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 243
Query: 1502 gggcag 1507
||||||
Sbjct: 242 gggcag 237
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 771 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 712
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 711 aatagcggagctggtgaaccacc 689
>gb|CX648337.1|CX648337 COLD1_28_B08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B08_A029 3', mRNA sequence
Length = 803
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 147 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 206
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 207 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 266
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 267 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 326
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 327 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 386
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 387 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 446
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 447 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 506
Query: 1502 gggcag 1507
||||||
Sbjct: 507 gggcag 512
Score = 40.2 bits (20), Expect = 0.30
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1004 gagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacc 1055
||||| |||||||||||||| || |||| | || ||||||||||||||||
Sbjct: 9 gagacaacgctgtggtcgatggaatggggaatagcggagctggtgaaccacc 60
>gb|DR010857.1|DR010857 HEAT1_1_F06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F06_A029 5', mRNA sequence
Length = 742
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 455 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 396
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 395 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 336
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 335 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 276
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 275 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 216
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 215 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 156
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 155 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 96
Query: 1502 gggcag 1507
||||||
Sbjct: 95 gggcag 90
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 624 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 565
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 564 aatagcggagctggtgaaccacc 542
>gb|DR020355.1|DR020355 STRS1_36_H06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H06_A034 3', mRNA sequence
Length = 762
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 105 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 164
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 165 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 224
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 225 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 284
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 285 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 344
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 345 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 404
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 405 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 464
Query: 1502 gggcag 1507
||||||
Sbjct: 465 gggcag 470
>gb|DR020425.1|DR020425 STRS1_36_H06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_36_H06_A034 5', mRNA sequence
Length = 622
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 75 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 134
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 135 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 194
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 195 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 254
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 255 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 314
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 315 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 374
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 375 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 434
Query: 1502 gggcag 1507
||||||
Sbjct: 435 gggcag 440
>gb|DR022465.1|DR022465 STRS1_51_F01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_51_F01_A034 3', mRNA sequence
Length = 831
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 206 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 265
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 266 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 325
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 326 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 385
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 386 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 445
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 446 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 505
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 506 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 565
Query: 1502 gggcag 1507
||||||
Sbjct: 566 gggcag 571
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 37 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 96
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 97 aatagcggagctggtgaaccacc 119
>gb|DR053466.1|DR053466 RTCA1_11_G10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_11_G10_A029 3', mRNA sequence
Length = 720
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 59 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 118
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 119 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 178
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 179 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 238
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 239 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 298
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 299 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 358
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 359 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 418
Query: 1502 gggcag 1507
||||||
Sbjct: 419 gggcag 424
>gb|DR069623.1|DR069623 RTDK1_8_H09.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_H09_A029 3', mRNA sequence
Length = 879
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 218 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 277
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 278 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 337
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 338 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 397
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 398 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 457
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 458 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 517
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 518 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 577
Query: 1502 gggcag 1507
||||||
Sbjct: 578 gggcag 583
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 49 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 108
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 109 aatagcggagctggtgaaccacc 131
>gb|DR069742.1|DR069742 RTDK1_9_D10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_D10_A029 3', mRNA sequence
Length = 834
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 136 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 195
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 196 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 255
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 256 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 315
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 316 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 375
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 376 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 435
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 436 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 495
Query: 1502 gggcag 1507
||||||
Sbjct: 496 gggcag 501
Score = 36.2 bits (18), Expect = 4.7
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 1010 acgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacc 1055
|||||||||||||| || |||| | || ||||||||||||||||
Sbjct: 4 acgctgtggtcgatggaatggggaatagcggagctggtgaaccacc 49
>gb|DR077997.1|DR077997 RTFEPL1_1_G01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_G01_A029 3', mRNA sequence
Length = 798
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 148 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 207
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 208 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 267
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 268 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 327
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 328 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 387
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 388 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 447
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 448 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 507
Query: 1502 gggcag 1507
||||||
Sbjct: 508 gggcag 513
Score = 42.2 bits (21), Expect = 0.076
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 995 gcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccac 1054
||||| || ||||| |||||||||||||| || |||| | || |||||||||||||||
Sbjct: 1 gcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaaccac 60
Query: 1055 c 1055
|
Sbjct: 61 c 61
>gb|DR078053.1|DR078053 RTFEPL1_1_D06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_D06_A029 5', mRNA sequence
Length = 810
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 614 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 555
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 554 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 495
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 494 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 435
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 434 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 375
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 374 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 315
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 314 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 255
Query: 1502 gggcag 1507
||||||
Sbjct: 254 gggcag 249
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 783 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 724
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 723 aatagcggagctggtgaaccacc 701
>gb|DR078079.1|DR078079 RTFEPL1_1_G01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_G01_A029 5', mRNA sequence
Length = 824
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 297 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 356
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 357 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 416
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 417 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 476
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 477 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 536
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 537 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 596
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 597 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 656
Query: 1502 gggcag 1507
||||||
Sbjct: 657 gggcag 662
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 128 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 187
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 188 aatagcggagctggtgaaccacc 210
>gb|DR098259.1|DR098259 STRR1_40_E06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_40_E06_A033 3', mRNA sequence
Length = 875
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 229 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 288
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 289 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 348
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 349 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 408
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 409 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 468
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 469 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 528
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 529 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 588
Query: 1502 gggcag 1507
||||||
Sbjct: 589 gggcag 594
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 60 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 119
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 120 aatagcggagctggtgaaccacc 142
>gb|DR120850.1|DR120850 RTMG1_32_H05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_32_H05_A029 3', mRNA sequence
Length = 778
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 121 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 180
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 181 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 240
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 241 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 300
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 301 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 360
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 361 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 420
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 421 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 480
Query: 1502 gggcag 1507
||||||
Sbjct: 481 gggcag 486
>gb|DR178053.1|DR178053 RTMNUT1_9_B04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_9_B04_A029 3', mRNA sequence
Length = 776
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 120 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 179
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 180 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 239
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 240 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 299
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 300 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 359
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 360 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 419
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 420 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 479
Query: 1502 gggcag 1507
||||||
Sbjct: 480 gggcag 485
>gb|DR179407.1|DR179407 RTMNUT1_22_A02.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_22_A02_A029 3', mRNA sequence
Length = 856
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 155 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 214
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 215 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 274
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 275 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 334
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 335 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 394
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 395 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 454
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 455 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 514
Query: 1502 gggcag 1507
||||||
Sbjct: 515 gggcag 520
Score = 56.0 bits (28), Expect = 5e-006
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 989 aacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtg 1048
||||||||||| || ||||| |||||||||||||| || |||| | || |||||||||
Sbjct: 2 aacgttgcagcaattgagacaacgctgtggtcgatggaatgggnaatagcggagctggtg 61
Query: 1049 aaccacc 1055
|||||||
Sbjct: 62 aaccacc 68
>gb|DR180812.1|DR180812 RTMNUT1_35_B03.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_35_B03_A029 3', mRNA sequence
Length = 768
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 109 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 168
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 169 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 228
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 229 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 288
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 289 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 348
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 349 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 408
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 409 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 468
Query: 1502 gggcag 1507
||||||
Sbjct: 469 gggcag 474
>gb|DR385097.1|DR385097 RTHG1_6_D02.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_6_D02_A029 5', mRNA sequence
Length = 873
Score = 188 bits (95), Expect = 5e-046
Identities = 297/366 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 637 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 578
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 577 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 518
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 517 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 458
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 457 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 398
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 397 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 338
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 337 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 278
Query: 1502 gggcag 1507
||||||
Sbjct: 277 gggcag 272
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 806 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 747
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 746 aatagcggagctggtgaaccacc 724
>gb|CF387281.1|CF387281 RTDR1_11_A09.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_11_A09_A015 5', mRNA
sequence
Length = 748
Score = 184 bits (93), Expect = 8e-045
Identities = 295/364 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 385 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 444
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 445 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 504
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 505 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 564
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 565 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 624
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 625 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 684
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 685 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 744
Query: 1502 gggc 1505
||||
Sbjct: 745 gggc 748
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 216 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 275
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 276 aatagcggagctggtgaaccacc 298
>gb|CF389398.1|CF389398 RTDR2_7_E10.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_E10_A021 3', mRNA sequence
Length = 618
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 3 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 62
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 63 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 122
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 123 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 182
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 183 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 242
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 243 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 302
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 303 caccttctgccgccgcccgggcag 326
>gb|CF402842.1|CF402842 RTWW1_23_D03.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_23_D03_A015 3', mRNA sequence
Length = 618
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 3 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 62
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 63 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 122
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 123 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 182
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 183 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 242
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 243 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 302
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 303 caccttctgccgccgcccgggcag 326
>gb|CF471221.1|CF471221 RTDS1_2_D09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_D09_A015 3', mRNA sequence
Length = 645
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 37 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 96
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 97 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 156
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 157 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 216
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 217 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 276
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 277 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 336
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 337 caccttctgccgccgcccgggcag 360
>gb|CF471858.1|CF471858 RTDS1_7_G12.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_G12_A015 3', mRNA sequence
Length = 620
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 5 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 64
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 65 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 124
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 125 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 184
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 185 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 244
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 245 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 304
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 305 caccttctgccgccgcccgggcag 328
>gb|CF669934.1|CF669934 RTCNT1_47_B04.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_B04_A029 3', mRNA sequence
Length = 627
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 7 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 66
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 67 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 126
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 127 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 186
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 187 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 246
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 247 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 306
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 307 caccttctgccgccgcccgggcag 330
>gb|CO198057.1|CO198057 GEO1_11_A08.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_A08_A029 3', mRNA sequence
Length = 662
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 3 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 62
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 63 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 122
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 123 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 182
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 183 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 242
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 243 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 302
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 303 caccttctgccgccgcccgggcag 326
>gb|DR022529.1|DR022529 STRS1_51_F01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_51_F01_A034 5', mRNA sequence
Length = 720
Score = 184 bits (93), Expect = 8e-045
Identities = 295/364 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 357 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 416
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 417 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 476
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 477 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 536
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 537 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 596
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 597 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 656
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 657 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 716
Query: 1502 gggc 1505
||||
Sbjct: 717 gggc 720
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 188 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 247
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 248 aatagcggagctggtgaaccacc 270
>gb|DR059327.1|DR059327 RTNIT1_17_C03.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_17_C03_A029 3', mRNA sequence
Length = 762
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Minus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 493 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 434
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 433 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 374
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 373 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 314
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 313 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 254
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 253 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 194
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 193 caccttctgccgccgcccgggcag 170
Score = 62.0 bits (31), Expect = 8e-008
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgat 1023
|||||| |||||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 711 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgat 661
>gb|DR101584.1|DR101584 STRR1_74_H05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H05_A033 3', mRNA sequence
Length = 836
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 192 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 251
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 252 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 311
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 312 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 371
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 372 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 431
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 432 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 491
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 492 caccttctgccgccgcccgggcag 515
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 991 cgttgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaa 1050
||||||||| || ||||| |||||||||||||| || |||| | || |||||||||||
Sbjct: 1 cgttgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaa 60
Query: 1051 ccacc 1055
|||||
Sbjct: 61 ccacc 65
>gb|DR743699.1|DR743699 RTCU1_17_D07.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_D07_A029 5', mRNA sequence
Length = 771
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Minus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 435 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 376
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 375 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 316
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 315 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 256
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 255 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 196
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 195 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 136
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 135 caccttctgccgccgcccgggcag 112
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 646 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 587
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 586 aatagcggagctggtgaaccacc 564
>gb|DR744974.1|DR744974 RTCU1_26_D05.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_26_D05_A029 3', mRNA sequence
Length = 620
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 5 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 64
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 65 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 124
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 125 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 184
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 185 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 244
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 245 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 304
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 305 caccttctgccgccgcccgggcag 328
>gb|DR745352.1|DR745352 RTCU1_28_E12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_28_E12_A029 5', mRNA sequence
Length = 600
Score = 184 bits (93), Expect = 8e-045
Identities = 265/324 (81%)
Strand = Plus / Minus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 594 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 535
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 534 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 475
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 474 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 415
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 414 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 355
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || |||||||||
Sbjct: 354 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttc 295
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 294 caccttctgccgccgcccgggcag 271
>gb|CF400856.1|CF400856 RTWW1_8_G10.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_8_G10_A015 5', mRNA sequence
Length = 783
Score = 183 bits (92), Expect = 3e-044
Identities = 296/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 294 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 353
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||| ||||||| || ||||| || || || ||||||
Sbjct: 354 gtcccccacatgaatctccacgacgccnagctcgggggctacgatattccggcagagagc 413
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 414 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 473
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 474 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 533
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 534 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 593
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 594 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 653
Query: 1502 gggcag 1507
||||||
Sbjct: 654 gggcag 659
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 125 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 184
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 185 aatagcggagctggtgaaccacc 207
>gb|AI812771.1|AI812771 18H4 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 518
Score = 181 bits (91), Expect = 1e-043
Identities = 296/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 56 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 115
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 116 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 175
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 176 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 235
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 236 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 295
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 296 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 355
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||| ||||||
Sbjct: 356 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgcctccgccc 415
Query: 1502 gggcag 1507
||||||
Sbjct: 416 gggcag 421
>gb|CF473126.1|CF473126 RTDS1_1_A10.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_A10_A015 5', mRNA sequence
Length = 701
Score = 181 bits (91), Expect = 1e-043
Identities = 296/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 145 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 204
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 205 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 264
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 265 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 324
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 325 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 384
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|| | | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 385 tttaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 444
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 445 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 504
Query: 1502 gggcag 1507
||||||
Sbjct: 505 gggcag 510
Score = 40.2 bits (20), Expect = 0.30
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1004 gagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacc 1055
||||| |||||||||||||| || |||| | || ||||||||||||||||
Sbjct: 7 gagacaacgctgtggtcgatggaatggggaatagcggagctggtgaaccacc 58
>gb|CO160429.1|CO160429 FLD1_20_H12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_20_H12_A029 5', mRNA sequence
Length = 785
Score = 181 bits (91), Expect = 1e-043
Identities = 296/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 127 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 186
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||| ||||||| || ||||| || || || ||||||
Sbjct: 187 gtcccccacatgaatctccacgacgcctagctcgggggctacgatattccggcagagagc 246
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 247 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 306
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 307 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 366
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 367 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 426
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 427 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 486
Query: 1502 gggcag 1507
||||||
Sbjct: 487 gggcag 492
>gb|CX650723.1|CX650723 COLD1_47_E04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_47_E04_A029 5', mRNA sequence
Length = 711
Score = 181 bits (91), Expect = 1e-043
Identities = 296/366 (80%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 614 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 555
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| ||||| |||||||||||||| || ||||| || || || ||||||
Sbjct: 554 gtcccccacatgaatctccatgacgccaagctcgggggctacgatattccggcagagagc 495
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 494 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 435
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 434 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 375
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 374 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 315
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 314 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 255
Query: 1502 gggcag 1507
||||||
Sbjct: 254 gggcag 249
>gb|DR023030.1|DR023030 STRS1_55_B12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_B12_A034 3', mRNA sequence
Length = 767
Score = 181 bits (91), Expect = 1e-043
Identities = 296/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 117 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 176
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 177 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 236
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 237 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 296
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||| | ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 297 gagttccgccccgagtggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 356
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 357 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 416
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 417 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 476
Query: 1502 gggcag 1507
||||||
Sbjct: 477 gggcag 482
>gb|AW290024.1|AW290024 NXNV009G04F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009G04 5', mRNA sequence
Length = 438
Score = 179 bits (90), Expect = 5e-043
Identities = 264/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 41 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 100
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 101 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 160
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 161 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 220
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 221 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 280
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || | |||||||
Sbjct: 281 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcngaacttc 340
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 341 caccttctgccgccgcccgggcag 364
>gb|CD026691.1|CD026691 NXNV009G04 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009G04 5' similar to Arabidopsis thaliana sequence
At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 438
Score = 179 bits (90), Expect = 5e-043
Identities = 264/324 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 41 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 100
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 101 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 160
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 161 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 220
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 221 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 280
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| || ||||||| | || || | |||||||
Sbjct: 281 ggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcngaacttc 340
Query: 1484 gagctgctgccgccgcccgggcag 1507
| || ||||||||||||||||||
Sbjct: 341 caccttctgccgccgcccgggcag 364
>gb|CF666119.1|CF666119 RTCNT1_21_A01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_21_A01_A029 3', mRNA sequence
Length = 600
Score = 177 bits (89), Expect = 2e-042
Identities = 246/300 (82%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
|||||||| |||||||||||||||||||| || ||||| || || || ||||||||||||
Sbjct: 9 cacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagcaagatc 68
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggagttc 1327
|| || |||||||||| | ||||||||||||| || |||| | ||||||||||||
Sbjct: 69 ctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgaggagttc 128
Query: 1328 cggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcagg 1387
|| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||
Sbjct: 129 cgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgacttcaaa 188
Query: 1388 tacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatc 1447
| |||||||||||| || || | ||||||||||| || ||||| || || ||||| ||
Sbjct: 189 ttcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctc 248
Query: 1448 ctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|||| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 249 ctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 308
>gb|AI812842.1|AI812842 20F6 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 539
Score = 175 bits (88), Expect = 7e-042
Identities = 297/367 (80%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 71 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 130
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 131 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 190
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 191 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 250
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 251 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 310
Query: 1382 ttcaggtacctgcccttcgg-cgtcggccgcaggagctgccccgggatcatcctcgccct 1440
|||| | |||||||||||| || || | ||||||||||| || ||||| || || ||
Sbjct: 311 ttcaaattcctgcccttcggttgtggggaggaggagctgcccgggaatcattctggcgct 370
Query: 1441 gcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcc 1500
||| |||||| || ||||||| | || || ||||||||| | || |||||||||||
Sbjct: 371 gcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcc 430
Query: 1501 cgggcag 1507
|||||||
Sbjct: 431 cgggcag 437
>gb|CF470481.1|CF470481 RTDS1_17_C04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_C04_A015 5', mRNA sequence
Length = 744
Score = 175 bits (88), Expect = 7e-042
Identities = 297/367 (80%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 80 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 139
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 140 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 199
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 200 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 259
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 260 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 319
Query: 1382 ttcaggtacctgcccttcggcgt-cggccgcaggagctgccccgggatcatcctcgccct 1440
|||| | |||||||||||| || || | ||||||||||| || ||||| || || ||
Sbjct: 320 ttcaaattcctgcccttcggtgtgggggaggaggagctgcccgggaatcattctggcgct 379
Query: 1441 gcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcc 1500
||| |||||| || ||||||| | || || ||||||||| | || |||||||||||
Sbjct: 380 gcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcc 439
Query: 1501 cgggcag 1507
|||||||
Sbjct: 440 cgggcag 446
>gb|DR180889.1|DR180889 RTMNUT1_35_B03.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_35_B03_A029 5', mRNA sequence
Length = 836
Score = 175 bits (88), Expect = 7e-042
Identities = 238/290 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 509 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 568
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 569 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 628
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 629 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 688
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 689 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 748
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 749 ttcaaattcctgcccttcggtgtggggaggaggagctgcccnggaatcat 798
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 340 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 399
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 400 aatagcggagctggtgaaccacc 422
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 37 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 96
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 97 gagctttgagtacaattatggggatttcattcccat 132
>dbj|BD224279.1| Materials and methods for the modification of plant lignin content
Length = 940
Score = 175 bits (88), Expect = 7e-042
Identities = 296/366 (80%), Gaps = 1/366 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 211 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 270
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 271 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 330
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 331 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 390
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 391 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 450
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||| ||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 451 ttcaaattcctgnccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 510
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
| | |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 511 ctc-tcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 569
Query: 1502 gggcag 1507
||||||
Sbjct: 570 gggcag 575
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 42 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 101
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 102 aatagcggagctggtgaaccacc 124
>gb|BQ699741.1|BQ699741 NXRV128_C09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV128_C09 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 560
Score = 173 bits (87), Expect = 3e-041
Identities = 296/367 (80%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 114 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 173
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 174 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 233
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 234 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 293
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 294 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 353
Query: 1382 ttcaggtacctgcccttcggcgtcggcc-gcaggagctgccccgggatcatcctcgccct 1440
|||| | |||||||||||| || | | ||||||||||| || ||||| || || ||
Sbjct: 354 ttcaaattcctgcccttcggtgtggnnnaggaggagctgcccgggaatcattctggcgct 413
Query: 1441 gcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcc 1500
||| |||||| || ||||||| | || || ||||||||| | || |||||||||||
Sbjct: 414 gcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcc 473
Query: 1501 cgggcag 1507
|||||||
Sbjct: 474 cgggcag 480
>gb|CF386137.1|CF386137 RTDR1_8_D09.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_8_D09_A015 5', mRNA
sequence
Length = 707
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 46 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 105
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 106 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 165
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 166 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 220
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 311 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 370
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 371 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 430
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 431 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 490
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 491 gggtacctgaagatctgcaaggaggt 516
Score = 71.9 bits (36), Expect = 8e-011
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 608 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 667
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcg 1004
|| |||| |||||| ||||||||||| |||||||| ||||
Sbjct: 668 gtcctctacatcgtggagaacattaatgttgcagcaatcg 707
>gb|CF386488.1|CF386488 RTDR1_14_G02.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_14_G02_A015 5', mRNA
sequence
Length = 682
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 25 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 84
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 85 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 144
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 145 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 199
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 290 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 349
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 350 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 409
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 410 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 469
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 470 gggtacctgaagatctgcaaggaggt 495
Score = 69.9 bits (35), Expect = 3e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 587 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 646
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagc 999
|| |||| |||||| ||||||||||| ||||||||
Sbjct: 647 gtcctctacatcgtggagaacattaatgttgcagc 681
>gb|CF477477.1|CF477477 RTWW3_8_G12.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_8_G12_A022 3', mRNA sequence
Length = 601
Score = 173 bits (87), Expect = 3e-041
Identities = 244/298 (81%)
Strand = Plus / Plus
Query: 1210 catgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatcct 1269
|||||| |||||||||||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 1 catgaatctccacgacgccaagctcgggggctacgatattccggcagagagcaagatcct 60
Query: 1270 cgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggagttccg 1329
|| |||||||||| | ||||||||||||| || |||| | ||||||||||||||
Sbjct: 61 ggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgaggagttccg 120
Query: 1330 gcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggta 1389
|||||||| ||| ||||||||||||||||| ||| ||||| ||||||||||||| |
Sbjct: 121 ccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgacttcaaatt 180
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 181 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 240
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 241 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 298
>gb|CF479694.1|CF479694 RTWW3_11_A12.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_A12_A022 5', mRNA sequence
Length = 584
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 39 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 98
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 99 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 158
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 159 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 213
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 304 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 363
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 364 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 423
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 424 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 483
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 484 gggtacctgaagatctgcaaggaggt 509
>gb|CF669075.1|CF669075 RTCNT1_40_B01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_40_B01_A029 5', mRNA sequence
Length = 634
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 290 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 350 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 409
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 410 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 464
Score = 64.0 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 555 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 614
Query: 668 agcatggacgacccgctctt 687
||| |||||||||||||||
Sbjct: 615 agcgaggacgacccgctctt 634
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 144 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 187
>gb|CF669355.1|CF669355 RTCNT1_42_F10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_F10_A029 5', mRNA sequence
Length = 765
Score = 173 bits (87), Expect = 3e-041
Identities = 238/290 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 432 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 491
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 492 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 551
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 552 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 611
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 612 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 671
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 672 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcat 721
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 263 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 322
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 323 aatagcggagctggtgaaccacc 345
>gb|CF672446.1|CF672446 RTCNT1_63_D08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_63_D08_A029 5', mRNA sequence
Length = 720
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 292 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 351
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 352 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 411
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 412 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 466
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 557 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 616
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 617 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 676
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 677 gcccagagcttcgagtataactatggtgacttcat 711
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 146 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 189
>gb|BX681070.1|BX681070 BX681070 RS Pinus pinaster cDNA clone RS52G08, mRNA sequence
Length = 250
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 20 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 79
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 80 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 139
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 140 gatgcggcggatcatgacagtgcccttctttaccaacaaggtcgtccagcagtac 194
>gb|CO198374.1|CO198374 GEO1_13_E11.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_E11_A029 3', mRNA sequence
Length = 805
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 514 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 455
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 454 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 395
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 394 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 340
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Minus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 249 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 190
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 189 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 130
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 129 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 70
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 69 gggtacctgaagatctgcaaggaggt 44
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 660 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 617
>gb|CO366112.1|CO366112 RTK1_25_H12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_25_H12_A029 5', mRNA sequence
Length = 766
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 74 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 133
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 134 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 193
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 194 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 248
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 339 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 398
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 399 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 458
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 459 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 518
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 519 gggtacctgaagatctgcaaggaggt 544
Score = 79.8 bits (40), Expect = 3e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 636 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 695
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagac 1008
|| |||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 696 gtcctctacatcgtggagaacattaatgttgcagcaatcgagac 739
>gb|CO367203.1|CO367203 RTK1_32_G09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_G09_A029 5', mRNA sequence
Length = 832
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 294 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 353
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 354 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 413
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 414 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 468
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 559 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 618
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 619 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 678
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 679 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 738
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 739 gggtacctgaagatctgcaaggaggt 764
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 148 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 191
>gb|CV137016.1|CV137016 EST848225 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAJ16 5' end, mRNA sequence
Length = 806
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 327 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 386
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 387 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 446
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 447 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 501
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 592 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 651
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 652 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 711
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 712 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 771
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 772 gggtacctgaagatctgcaaggaggt 797
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 181 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 224
>gb|CV137537.1|CV137537 EST848746 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAP73 5' end, mRNA sequence
Length = 481
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 7 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 66
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 67 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 126
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 127 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 181
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 272 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 331
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 332 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 391
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 392 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 451
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 452 gggtacctgaagatctgcaaggaggt 477
>gb|CV145292.1|CV145292 EST856501 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDG68 5' end, mRNA sequence
Length = 912
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 531 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 590
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 591 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 650
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 651 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 705
Score = 97.7 bits (49), Expect = 1e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 796 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 855
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgc 724
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||
Sbjct: 856 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgc 912
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 385 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 428
>gb|CV148003.1|CV148003 EST859212 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIED52 5' end, mRNA sequence
Length = 752
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 325 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 384
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 385 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 444
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 445 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 499
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 590 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 649
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 650 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 709
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 710 gcccagagcttcgagtataactatggtgacttcat 744
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 179 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 222
>gb|DN458423.1|DN458423 EST954222 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHB77 5' end, mRNA sequence
Length = 923
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 327 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 386
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 387 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 446
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 447 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 501
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 592 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 651
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 652 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 711
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 712 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 771
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 772 gggtacctgaagatctgcaaggaggt 797
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 181 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 224
>gb|DN459149.1|DN459149 EST954948 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHJ89 5' end, mRNA sequence
Length = 918
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 327 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 386
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 387 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 446
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 447 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 501
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 592 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 651
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 652 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 711
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 712 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 771
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 772 gggtacctgaagatctgcaaggaggt 797
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 181 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 224
>gb|DN459740.1|DN459740 EST955539 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHQ49 5' end, mRNA sequence
Length = 848
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 268 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 327
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 328 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 387
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 388 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 442
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 533 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 592
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 593 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 652
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 653 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 712
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 713 gggtacctgaagatctgcaaggaggt 738
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 122 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 165
>gb|DN460431.1|DN460431 EST956230 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHY47 5' end, mRNA sequence
Length = 780
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 107 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 166
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 167 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 226
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 227 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 281
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 372 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 431
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 432 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 491
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 492 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 551
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 552 gggtacctgaagatctgcaaggaggt 577
Score = 71.9 bits (36), Expect = 8e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || || || ||||||| || |||||||| |||||
Sbjct: 669 aagtgcgctattgatcacatcttcgaagctgaggagaagggcgaaatcaacgaagacaat 728
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagac 1008
|| |||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 729 gtcctctacatcgtggagaacattaatgttgcagcaatcgagac 772
>gb|DR048562.1|DR048562 RTBOR1_9_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_9_E10_A029 5', mRNA sequence
Length = 376
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 186 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 245
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 246 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 305
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 306 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 360
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 40 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 83
>gb|DR051105.1|DR051105 RTBOR1_27_E08.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_27_E08_A029 5', mRNA sequence
Length = 686
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 632 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 573
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 572 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 513
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 512 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 458
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Minus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 367 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 308
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 307 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 248
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 247 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 188
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 187 gggtacctgaagatctgcaaggaggt 162
>gb|DR081268.1|DR081268 RTFEPL1_28_B04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_B04_A029 5', mRNA sequence
Length = 736
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 315 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 374
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 375 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 434
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 435 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 489
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 580 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 639
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 640 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 699
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 700 gcccagagcttcgagtataactatggtgacttcat 734
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 169 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 212
>gb|DR097597.1|DR097597 STRR1_35_F09.g4_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_35_F09_A033 5', mRNA sequence
Length = 881
Score = 173 bits (87), Expect = 3e-041
Identities = 238/290 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 525 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 584
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 585 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 644
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 645 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 704
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 705 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 764
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 765 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcat 814
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 356 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 415
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 416 aatagcggagctggtgaaccacc 438
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 53 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 112
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 113 gagctttgagtacaattatggggatttcattcccat 148
>gb|DR099653.1|DR099653 STRR1_57_D07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_D07_A033 3', mRNA sequence
Length = 528
Score = 173 bits (87), Expect = 3e-041
Identities = 238/290 (82%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 329 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 270
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 269 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 210
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 209 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 150
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 149 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 90
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 89 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcat 40
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 498 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 439
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 438 aatagcggagctggtgaaccacc 416
>gb|DR742942.1|DR742942 RTCU1_8_B04.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_8_B04_A029 5', mRNA sequence
Length = 517
Score = 173 bits (87), Expect = 3e-041
Identities = 238/290 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 212 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 271
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 272 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 331
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 332 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 391
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 392 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 451
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 452 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcat 501
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 43 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 102
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 103 aatagcggagctggtgaaccacc 125
>gb|AF096998.1| Pinus taeda trans-cinnamate 4-hydroxylase (TC4H) mRNA, complete cds
Length = 1996
Score = 173 bits (87), Expect = 3e-041
Identities = 153/175 (87%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 344 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 403
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 404 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 463
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 464 gatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagcagtac 518
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 609 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 668
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 669 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 728
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 729 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 788
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 789 gggtacctgaagatctgcaaggaggt 814
Score = 93.7 bits (47), Expect = 2e-017
Identities = 310/398 (77%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || || || ||||||| || |||||||| |||||
Sbjct: 906 aagtgcgctattgatcacatcttcgaagctgaggagaagggcgaaatcaacgaagacaat 965
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 966 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 1025
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 1026 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 1085
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 1086 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 1145
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 1146 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcgattcccctgcttgtg 1205
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
|| ||||||||||| ||| | |||||||||||||| |||||||| || ||||| |||||
Sbjct: 1206 cctcacatgaaccttcaccaggccaagctcggcggctacgacattccggccgaaagcaaa 1265
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccga 1302
|| || || || ||||||| || |||||||| |||||
Sbjct: 1266 atactggtgaatgcctggtttctggccaacaatcccga 1303
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 198 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 241
Score = 40.2 bits (20), Expect = 0.30
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1475 cagaacttcgagctgctgccgccgcccgggca 1506
|||||||| ||||||||||| ||||| |||||
Sbjct: 1473 cagaactttgagctgctgcctccgcctgggca 1504
>dbj|BD224324.1| Materials and methods for the modification of plant lignin content
Length = 1785
Score = 173 bits (87), Expect = 3e-041
Identities = 296/366 (80%), Gaps = 1/366 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 1056 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 1115
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 1116 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 1175
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 1176 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 1235
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 1236 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 1295
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||| ||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 1296 ttcaaattcctg-ccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 1354
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 1355 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 1414
Query: 1502 gggcag 1507
||||||
Sbjct: 1415 gggcag 1420
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| ||||| || || || ||||| |||||||| |||||
Sbjct: 253 ggaggtcctgcacacccagggcgtcgagtttgggtctcgaacccggaacgtggtgttcga 312
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 313 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 372
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 373 gatgcgcaggatcatgactgtgcctttctt 402
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 887 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 946
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 947 aatagcggagctggtgaaccacc 969
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 583 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 642
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 643 gagctttgagtacaattatggggatttcattcccat 678
>dbj|BD224400.1| Materials and methods for the modification of plant lignin content
Length = 1659
Score = 173 bits (87), Expect = 3e-041
Identities = 295/366 (80%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 929 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 988
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 989 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 1048
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 1049 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 1108
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 1109 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 1168
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||| | ||| || || | ||||||||||| || ||||| || || |||
Sbjct: 1169 ttcaaattcctgccttgcggtgtggggaggaggagctgcccgggaatcattctggcgctg 1228
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 1229 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 1288
Query: 1502 gggcag 1507
||||||
Sbjct: 1289 gggcag 1294
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| ||||| || || || ||||| |||||||| |||||
Sbjct: 127 ggaggtcctgcacacccagggcgtcgagtttgggtctcgaacccggaacgtggtgttcga 186
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 187 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 246
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 247 gatgcgcaggatcatgactgtgcctttctt 276
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 760 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 819
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 820 aatagcggagctggtgaaccacc 842
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 457 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 516
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 517 gagctttgagtacaattatggggatttcattcccat 552
>dbj|BD272995.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1785
Score = 173 bits (87), Expect = 3e-041
Identities = 296/366 (80%), Gaps = 1/366 (0%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 1056 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 1115
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 1116 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 1175
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 1176 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 1235
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 1236 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 1295
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||| ||||||| || || | ||||||||||| || ||||| || || |||
Sbjct: 1296 ttcaaattcctg-ccttcggtgtggggaggaggagctgcccgggaatcattctggcgctg 1354
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| || ||||||| | || || ||||||||| | || ||||||||||||
Sbjct: 1355 cctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccc 1414
Query: 1502 gggcag 1507
||||||
Sbjct: 1415 gggcag 1420
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| ||||| || || || ||||| |||||||| |||||
Sbjct: 253 ggaggtcctgcacacccagggcgtcgagtttgggtctcgaacccggaacgtggtgttcga 312
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 313 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 372
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 373 gatgcgcaggatcatgactgtgcctttctt 402
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 887 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 946
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 947 aatagcggagctggtgaaccacc 969
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 583 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 642
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 643 gagctttgagtacaattatggggatttcattcccat 678
>gb|CF400820.1|CF400820 RTWW1_8_G10.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_8_G10_A015 3', mRNA sequence
Length = 641
Score = 171 bits (86), Expect = 1e-040
Identities = 265/325 (81%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 5 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 64
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 65 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 124
Query: 1304 -agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgt 1362
| |||| | |||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 125 caactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacac 184
Query: 1363 cgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccc 1422
||| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 185 cgaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgccc 244
Query: 1423 cgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaactt 1482
|| ||||| || || ||||| |||||| || ||||||| | || || ||||||||
Sbjct: 245 gggaatcattctggcgctgcctctcctcgcactctccatcggaagacttgttcagaactt 304
Query: 1483 cgagctgctgccgccgcccgggcag 1507
| | || ||||||||||||||||||
Sbjct: 305 ccaccttctgccgccgcccgggcag 329
>gb|AW042602.1|AW042602 ST23G12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST23G12, mRNA sequence
Length = 478
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 121 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 180
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 181 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 240
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 241 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 300
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 301 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 360
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 361 ttcaaattcctgcccttcgg 380
>gb|BF777569.1|BF777569 NXSI_070_A12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_070_A12 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 318
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 55 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 114
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 115 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 174
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 175 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 234
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 235 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 294
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 295 ttcaaattcctgcccttcgg 314
>gb|BG039758.1|BG039758 NXSI_103_F12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_103_F12 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 322
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 63 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 122
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 123 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 182
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 183 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 242
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 243 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 302
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 303 ttcaaattcctgcccttcgg 322
>gb|BG040113.1|BG040113 NXSI_106_F02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_F02 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 326
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 63 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 122
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 123 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 182
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 183 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 242
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 243 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 302
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 303 ttcaaattcctgcccttcgg 322
>gb|BG275516.1|BG275516 NXSI_139_E05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_139_E05 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 417
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 130 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 189
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 190 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 249
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 250 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 309
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 310 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 369
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 370 ttcaaattcctgcccttcgg 389
>gb|BG276019.1|BG276019 NXSI_147_E12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_147_E12 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 343
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 58 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 117
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 118 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 177
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 178 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 237
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 238 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 297
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 298 ttcaaattcctgcccttcgg 317
>gb|BQ702414.1|BQ702414 NXSI_128_D03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_128_D03 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 447
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 63 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 122
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 123 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 182
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 183 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 242
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 243 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 302
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 303 ttcaaattcctgcccttcgg 322
>gb|CF471315.1|CF471315 RTDS1_2_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_D09_A015 5', mRNA sequence
Length = 650
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 296 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 355
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 356 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 415
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 416 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 475
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 476 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 535
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 536 ttcaaattcctgcccttcgg 555
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 127 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 186
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 187 aatagcggagctggtgaaccacc 209
>gb|CF473017.1|CF473017 RTDS1_1_A10.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_1_A10_A015 3', mRNA sequence
Length = 618
Score = 169 bits (85), Expect = 5e-040
Identities = 245/300 (81%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
|||||||| |||||||||||||||||||| || ||||| || || || ||||||||||||
Sbjct: 6 cacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagcaagatc 65
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggagttc 1327
|| || |||||||||| | ||||||||||||| || |||| | ||||||||||||
Sbjct: 66 ctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgaggagttc 125
Query: 1328 cggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcagg 1387
|| |||||||| ||| ||||||||||||||||| ||| ||||| ||||||||||| |
Sbjct: 126 cgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgactttaaa 185
Query: 1388 tacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatc 1447
| |||||||||||| || || | ||||||||||| || ||||| || || ||||| ||
Sbjct: 186 ttcctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctc 245
Query: 1448 ctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|||| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 246 ctcgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 305
>gb|CF670004.1|CF670004 RTCNT1_47_B04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_B04_A029 5', mRNA sequence
Length = 757
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 444 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 503
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 504 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 563
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 564 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 623
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 624 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 683
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 684 ttcaaattcctgcccttcgg 703
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 275 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 334
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 335 aatagcggagctggtgaaccacc 357
>gb|CV137929.1|CV137929 EST849138 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAW43 5' end, mRNA sequence
Length = 945
Score = 169 bits (85), Expect = 5e-040
Identities = 142/161 (88%)
Strand = Plus / Plus
Query: 353 cacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacg 412
||||||||||| ||||||||||| || || || || |||||||| |||||||| ||||||
Sbjct: 54 cacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcgacatattcacg 113
Query: 413 gacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgc 472
| ||||||||||||||||||||||| ||||||||||| || ||||| |||||||| ||
Sbjct: 114 gggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaagatgcggcgg 173
Query: 473 atcatgaccgtgcccttcttcaccaacaaggtcgtgcagca 513
|||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 174 atcatgacggtgcccttctttaccaacaaggtcgtccagca 214
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 309 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 368
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 369 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 428
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 429 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 488
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 489 gggtacctgaagatctgcaaggaggt 514
Score = 73.9 bits (37), Expect = 2e-011
Identities = 264/340 (77%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || || ||||| |||||
Sbjct: 606 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaataaacgaagacaat 665
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 666 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 725
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 726 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 785
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 786 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 845
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 846 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcaattcccctgcttgtg 905
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacg 1244
|| ||||||||||| ||| | |||||||||||||| ||||
Sbjct: 906 cctcacatgaaccttcaccaggccaagctcggcggctacg 945
>gb|DR010779.1|DR010779 HEAT1_1_F06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_1_F06_A029 3', mRNA sequence
Length = 731
Score = 169 bits (85), Expect = 5e-040
Identities = 215/260 (82%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 324 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 265
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 264 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 205
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 204 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 145
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 144 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 85
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 84 ttcaaattcctgcccttcgg 65
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 493 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 434
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 433 aatagcggagctggtgaaccacc 411
>gb|DR743628.1|DR743628 RTCU1_17_D07.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_D07_A029 3', mRNA sequence
Length = 820
Score = 169 bits (85), Expect = 5e-040
Identities = 206/248 (83%)
Strand = Plus / Minus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 280 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 221
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 220 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 161
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 160 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 101
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 100 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 41
Query: 1424 gggatcat 1431
|| |||||
Sbjct: 40 ggaatcat 33
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 491 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 432
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 431 aatagcggagctggtgaaccacc 409
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Minus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 794 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 735
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 734 gagctttgagtacaattatggggatttcattcccat 699
>gb|CF664502.1|CF664502 RTCNT1_10_E07.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_10_E07_A029 3', mRNA sequence
Length = 666
Score = 167 bits (84), Expect = 2e-039
Identities = 237/290 (81%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 351 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 292
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||| ||||||| || ||||| || || || ||||||
Sbjct: 291 gtcccccacatgaatctccacgacgccnagctcgggggctacgatattccggcagagagc 232
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 231 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 172
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 171 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 112
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| || || | ||||||||||| || |||||
Sbjct: 111 ttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcat 62
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 520 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 461
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 460 aatagcggagctggtgaaccacc 438
>gb|BX254863.1|BX254863 BX254863 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP106C08 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 672
Score = 165 bits (83), Expect = 7e-039
Identities = 329/413 (79%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 118 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 177
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 178 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 237
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | |||||||| |||| || |||| | ||||||
Sbjct: 238 aagatcctggtgaacgcctggtggttggccaacaatcccgccaactggaagaaccccgag 297
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||| |||||| || ||| ||||| |||||||||
Sbjct: 298 gagttccgccccgagcggttcttcgaggaagagaagaacaccgaagccaatggcaacgac 357
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| ||||| | ||||||||||| || ||||| || || |||
Sbjct: 358 ttcaaattcctgcccttcggtgtcgggaggaggagctgcccgggaatcattctggcgctg 417
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| | ||||||| | || || ||||||||| | || ||||| ||||||
Sbjct: 418 cctctcctcgcactttccatcggaagacttgttcagaacttccaccttctgcccccgccc 477
Query: 1502 gggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacat 1554
|||||| ||| || ||| ||| |||||||| || |||||||| || |||||
Sbjct: 478 gggcagagcaaagtggacgtcactgagaagggcgggcagttcagccttcacat 530
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1040 gagctggtgaaccacccggagat 1062
|||||||||||||||| ||||||
Sbjct: 16 gagctggtgaaccaccaggagat 38
>gb|BQ696484.1|BQ696484 NXPV_041_G06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_041_G06 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 247
Score = 165 bits (83), Expect = 7e-039
Identities = 183/218 (83%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 20 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 79
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 80 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 139
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 140 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 199
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcgg 1401
|| ||||| ||||||||||||| | ||||||||||||
Sbjct: 200 gaagccaatggcaacgacttcaaattcctgcccttcgg 237
>gb|BQ699654.1|BQ699654 NXRV125_B02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV125_B02 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 308
Score = 165 bits (83), Expect = 7e-039
Identities = 183/218 (83%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 62 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 121
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 122 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 181
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 182 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 241
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcgg 1401
|| ||||| ||||||||||||| | ||||||||||||
Sbjct: 242 gaagccaatggcaacgacttcaaattcctgcccttcgg 279
>gb|CF402046.1|CF402046 RTWW1_16_D12.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_16_D12_A015 5', mRNA sequence
Length = 702
Score = 165 bits (83), Expect = 7e-039
Identities = 213/258 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 445 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 504
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 505 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 564
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 565 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 624
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 625 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 684
Query: 1382 ttcaggtacctgcccttc 1399
|||| | ||||||||||
Sbjct: 685 ttcaaattcctgcccttc 702
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 276 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 335
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 336 aatagcggagctggtgaaccacc 358
>gb|DR101658.1|DR101658 STRR1_74_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_H05_A033 5', mRNA sequence
Length = 797
Score = 165 bits (83), Expect = 7e-039
Identities = 183/218 (83%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 565 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 624
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 625 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 684
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 685 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 744
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcgg 1401
|| ||||| ||||||||||||| | ||||||||||||
Sbjct: 745 gaagccaatggcaacgacttcaaattcctgcccttcgg 782
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 356 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 415
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 416 aatagcggagctggtgaaccacc 438
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 53 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 112
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 113 gagctttgagtacaattatggggatttcattcccat 148
>gb|DR385324.1|DR385324 RTHG1_8_A11.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_A11_A029 3', mRNA sequence
Length = 610
Score = 165 bits (83), Expect = 7e-039
Identities = 258/318 (81%)
Strand = Plus / Plus
Query: 1190 atcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatc 1249
|||||| |||| || || |||||||| |||||||||||||||||||| || ||||| ||
Sbjct: 1 atcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctacgatatt 60
Query: 1250 cccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytgg 1309
|| || |||||||||||||| || |||||||||| | ||||||||||||| || |||
Sbjct: 61 ccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactgg 120
Query: 1310 aggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggcc 1369
| | |||||||||||||| |||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 121 aagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagcc 180
Query: 1370 aacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatc 1429
|| ||||||||||||| | |||||||||||| || || | ||||||| ||| || |||
Sbjct: 181 aatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctccccgggaatc 240
Query: 1430 atcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctg 1489
|| || || ||||| |||||| || |||| || | || || ||||||||| | ||
Sbjct: 241 attctggcgctgcctctcctcgcactctccatgggaagacttgttcagaacttccacctt 300
Query: 1490 ctgccgccgcccgggcag 1507
||||||||||||||||||
Sbjct: 301 ctgccgccgcccgggcag 318
>emb|BX784398.1| Pinus pinaster STS PPC4HP1, sequence tagged site
Length = 550
Score = 165 bits (83), Expect = 7e-039
Identities = 152/175 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||||||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 299 ggaggttctgcacacgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 358
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct: 359 tatattcacggggaaggggcaggatatggtgttcacggtgtacggcgagcattggcggaa 418
Query: 463 gatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
|||||| || |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 419 gatgcggcggatcatgacagtgcccttctttaccaacaaggtcgtccagcagtac 473
Score = 64.0 bits (32), Expect = 2e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 153 gtgcccgtcttcgggaactggctgcaggtgggggacgatctcaa 196
>gb|AA556941.1|AA556941 783 Loblolly pine C Pinus taeda cDNA clone 7C7B, mRNA sequence
Length = 678
Score = 163 bits (82), Expect = 3e-038
Identities = 214/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 191 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 250
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || ||| |||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 251 gtcccccacntgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 310
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 311 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 370
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 371 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 430
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 431 ttcaaattcctgcccttcgg 450
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 22 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 81
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 82 aatagcggagctggtgaaccacc 104
>gb|AW888069.1|AW888069 NXNV_126_H07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_126_H07 5' similar to Arabidopsis thaliana sequence
At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 353
Score = 163 bits (82), Expect = 3e-038
Identities = 213/259 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 74 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 133
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 134 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 193
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 194 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 253
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| || ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 254 gagttccgccccgagcgnntcttcgaggaggagaagcacaccgaagccaatggcaacgac 313
Query: 1382 ttcaggtacctgcccttcg 1400
|||| | |||||||||||
Sbjct: 314 ttcaaattcctgcccttcg 332
>gb|BX252947.1|BX252947 BX252947 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP075D08 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 596
Score = 161 bits (81), Expect = 1e-037
Identities = 297/371 (80%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 13 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 72
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | |||||||| |||| |
Sbjct: 73 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaatcccgcc 132
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||| |||||| || |
Sbjct: 133 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaagagaagaacacc 192
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| ||||| | |||||||||||
Sbjct: 193 gaagccaatggcaacgacttcaaattcctgcccttcggtgtcgggaggaggagctgcccg 252
Query: 1424 gggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttc 1483
|| ||||| || || ||||| |||||| | ||||||| | || || |||||||||
Sbjct: 253 ggaatcattctggcgctgcctctcctcgcactttccatcggaagacttgttcagaacttc 312
Query: 1484 gagctgctgccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttc 1543
| || ||||| |||||||||||| ||| || ||| ||| |||||||| || ||||||
Sbjct: 313 caccttctgcccccgcccgggcagagcaaagtggacgtcactgagaagggcgggcagttc 372
Query: 1544 agtctccacat 1554
|| || |||||
Sbjct: 373 agccttcacat 383
>gb|BF778666.1|BF778666 NXSI_090_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_090_D08 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 440
Score = 161 bits (81), Expect = 1e-037
Identities = 202/244 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 55 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 114
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 115 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 174
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 175 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 234
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 235 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 294
Query: 1382 ttca 1385
||||
Sbjct: 295 ttca 298
>gb|BM427766.1|BM427766 NXRV_003_A06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_003_A06 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 561
Score = 161 bits (81), Expect = 1e-037
Identities = 205/248 (82%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||| ||||| || |||
Sbjct: 35 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaatctcgggggctac 94
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 95 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 154
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| ||||||||||||||||| |
Sbjct: 155 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacacc 214
Query: 1364 gaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgcccc 1423
|| ||||| ||||||||||||| | |||||||||||| || || | |||||||||||
Sbjct: 215 gaagccaatggcaacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccg 274
Query: 1424 gggatcat 1431
|| |||||
Sbjct: 275 ggaatcat 282
>gb|BQ701255.1|BQ701255 NXSI_061_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_061_D08 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 316
Score = 161 bits (81), Expect = 1e-037
Identities = 202/244 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 63 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 122
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 123 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 182
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 183 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 242
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 243 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 302
Query: 1382 ttca 1385
||||
Sbjct: 303 ttca 306
>gb|CF398102.1|CF398102 RTDS3_21_C08.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_21_C08_A022 3', mRNA sequence
Length = 758
Score = 161 bits (81), Expect = 1e-037
Identities = 213/259 (82%)
Strand = Plus / Minus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 460 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 401
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||| ||||||| || ||||| || || || ||||||
Sbjct: 400 gtcccccacatgaatctccacgacgccnagctcgggggctacgatattccggcagagagc 341
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 340 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 281
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 280 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 221
Query: 1382 ttcaggtacctgcccttcg 1400
|||| | |||||||||||
Sbjct: 220 ttcaaattcctgcccttcg 202
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 629 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 570
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 569 aatagcggagctggtgaaccacc 547
>gb|CF399422.1|CF399422 RTDS3_28_D06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_28_D06_A022 5', mRNA sequence
Length = 560
Score = 161 bits (81), Expect = 1e-037
Identities = 202/244 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 305 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 364
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 365 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 424
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 425 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 484
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 485 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 544
Query: 1382 ttca 1385
||||
Sbjct: 545 ttca 548
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 136 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 195
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 196 aatagcggagctggtgaaccacc 218
>gb|DR388680.1|DR388680 RTHG1_29_G06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_29_G06_A029 5', mRNA sequence
Length = 760
Score = 161 bits (81), Expect = 1e-037
Identities = 214/260 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 488 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 547
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 548 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 607
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 608 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 667
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||| | |||||||||
Sbjct: 668 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagcccatggcaacgac 727
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 728 ttcaaattcctgcccttcgg 747
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 319 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 378
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 379 aatagcggagctggtgaaccacc 401
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 16 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 75
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 76 gagctttgagtacaattatggggatttcattcccat 111
>gb|BX251949.1|BX251949 BX251949 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP057F03 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 672
Score = 159 bits (80), Expect = 4e-037
Identities = 328/413 (79%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 210 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 269
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 270 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 329
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | |||||||| |||| || |||| | ||||||
Sbjct: 330 aagatcctggtgaacgcctggtggttggccaacaatcccgccaactggaagaaccccgag 389
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||| |||||| || ||| ||||| |||||||||
Sbjct: 390 gagttccgccccgagcggttcttcgaggaagagaagaacaccgaagccaatggcaacgac 449
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctg 1441
|||| | |||||||||||| ||||| | ||||||||||| || ||||| || || |||
Sbjct: 450 ttcaaattcctgcccttcggtgtcgggaggaggagctgcccgggaatcattctggcgctg 509
Query: 1442 cccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgccc 1501
|| |||||| | ||||||| | || || ||||||||| | || ||||| ||||||
Sbjct: 510 cctctcctcgcactttccatcggaagacttgttcagaacttccaccttctgcccccgccc 569
Query: 1502 gggcaggacaaggtngacaccaccgagaagggaggccagttcagtctccacat 1554
|||||| || || ||| ||| |||||||| || |||||||| || |||||
Sbjct: 570 gggcagagcanagtggacgtcactgagaagggcgggcagttcagccttcacat 622
Score = 75.9 bits (38), Expect = 5e-012
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 41 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 100
Query: 1033 ggtcgctgagctggtgaaccacccggagat 1062
| || |||||||||||||||| ||||||
Sbjct: 101 aatagcggagctggtgaaccaccaggagat 130
>gb|BX254605.1|BX254605 BX254605 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP101A11 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 634
Score = 157 bits (79), Expect = 2e-036
Identities = 292/365 (80%)
Strand = Plus / Plus
Query: 1190 atcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatc 1249
|||||| |||| || || |||||||| |||||||||||||||||||| || ||||| ||
Sbjct: 4 atcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctacgatatt 63
Query: 1250 cccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytgg 1309
|| || |||||||||||||| || |||||||||| | |||||||| |||| || |||
Sbjct: 64 ccggcagagagcaagatcctggtgaacgcctggtggttggccaacaatcccgccaactgg 123
Query: 1310 aggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggcc 1369
| | |||||||||||||| |||||||| ||| ||||||| |||||| || ||| |||
Sbjct: 124 aagaaccccgaggagttccgccccgagcggttcttcgaggaagagaagaacaccgaagcc 183
Query: 1370 aacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatc 1429
|| ||||||||||||| | |||||||||||| ||||| | ||||||||||| || |||
Sbjct: 184 aatggcaacgacttcaaattcctgcccttcggtgtcgggaggaggagctgcccgggaatc 243
Query: 1430 atcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctg 1489
|| || || ||||| |||||| | ||||||| | || || ||||||||| | ||
Sbjct: 244 attctggcgctgcctctcctcgcactttccatcggaagacttgttcagaacttccacctt 303
Query: 1490 ctgccgccgcccgggcaggacaaggtngacaccaccgagaagggaggccagttcagtctc 1549
||||| |||||||||||| ||| || ||| ||| |||||||| || |||||||| ||
Sbjct: 304 ctgcccccgcccgggcagagcaaagtggacgtcactgagaagggcgggcagttcagcctt 363
Query: 1550 cacat 1554
|||||
Sbjct: 364 cacat 368
>gb|BX254943.1|BX254943 BX254943 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107H04 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 443
Score = 157 bits (79), Expect = 2e-036
Identities = 236/290 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 144 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 203
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 204 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 263
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | |||||||| |||| || |||| | ||||||
Sbjct: 264 aagatcctggtgaacgcctggtggttggccaacaatcccgccaactggaagaaccccgag 323
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||| |||||| || ||| ||||| |||||||||
Sbjct: 324 gagttccgccccgagcggttcttcgaggaagagaagaacaccgaagccaatggcaacgac 383
Query: 1382 ttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcat 1431
|||| | |||||||||||| ||||| | ||||||||||| || |||||
Sbjct: 384 ttcaaattcctgcccttcggtgtcgggaggaggagctgcccgggaatcat 433
Score = 46.1 bits (23), Expect = 0.005
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 1004 gagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacccggagat 1062
||||| |||||||||||||| || |||| | || |||||||||||||||| ||||||
Sbjct: 6 gagacaacgctgtggtcgatggaatggggaatagcggagctggtgaaccaccaggagat 64
>gb|DR095332.1|DR095332 STRR1_20_H02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_H02_A033 3', mRNA sequence
Length = 757
Score = 157 bits (79), Expect = 2e-036
Identities = 257/318 (80%)
Strand = Plus / Plus
Query: 1190 atcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatc 1249
|||||| |||| || || |||||||| ||||| |||||||||||||| || ||||| ||
Sbjct: 127 atcccgttgctcgtcccccacatgaatctccaagacgccaagctcgggggctacgatatt 186
Query: 1250 cccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytgg 1309
|| || |||||||||||||| || |||||||||| ||||||||||||| || |||
Sbjct: 187 ccggcagagagcaagatcctggtgaacgcctggtggtcggccaacaaccccgccaactgg 246
Query: 1310 aggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggcc 1369
| | |||||||||||||| |||||||| ||| ||||||||||||||||| ||| |||
Sbjct: 247 aagaaccccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagcc 306
Query: 1370 aacggcaacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatc 1429
|| ||||||||||||| | |||||| ||||| || || | ||||||||||| || |||
Sbjct: 307 aatggcaacgacttcaaattcctgcctttcggtgtggggaggaggagctgcccgggaatc 366
Query: 1430 atcctcgccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctg 1489
|| || || ||||| |||||| || ||||||| | || || ||||||||| | ||
Sbjct: 367 attctggcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccacctt 426
Query: 1490 ctgccgccgcccgggcag 1507
||||||||||||||||||
Sbjct: 427 ctgccgccgcccgggcag 444
>gb|CF395618.1|CF395618 RTDS2_12_H02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_H02_A021 5', mRNA sequence
Length = 700
Score = 155 bits (78), Expect = 7e-036
Identities = 201/244 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 446 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 505
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||| ||||||| || ||||| || || || ||||||
Sbjct: 506 gtcccccacatgaatctccacgacgccnagctcgggggctacgatattccggcagagagc 565
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 566 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 625
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 626 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 685
Query: 1382 ttca 1385
||||
Sbjct: 686 ttca 689
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 277 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 336
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 337 aatagcggagctggtgaaccacc 359
>gb|BQ699307.1|BQ699307 NXRV126_A09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV126_A09 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 346
Score = 153 bits (77), Expect = 3e-035
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 82 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 141
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || | |||
Sbjct: 142 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagnnagc 201
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 202 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 261
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| |||| |||||||||
Sbjct: 262 gagttccgccccgagcggttcttcgaggaggagaagcacaccgannccaatggcaacgac 321
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 322 ttcaaattcctgcccttcgg 341
>gb|CO159587.1|CO159587 FLD1_14_B09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_B09_A029 5', mRNA sequence
Length = 784
Score = 153 bits (77), Expect = 3e-035
Identities = 134/153 (87%)
Strand = Plus / Plus
Query: 365 gtggagttcggctcccgcacccgcaacgtggtcttcgacatcttcacggacaaggggcag 424
||||||||||| || || || || |||||||| ||||| || ||||||| |||||||||
Sbjct: 216 gtggagttcgggtcgcggactcggaacgtggtgttcgatatattcacggggaaggggcag 275
Query: 425 gacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtg 484
|||||||||||||| ||||||||||| || ||||| |||||||| || |||||||| |||
Sbjct: 276 gacatggtgttcacggtgtacggcgagcattggcggaagatgcggcggatcatgacggtg 335
Query: 485 cccttcttcaccaacaaggtcgtgcagcagtac 517
|||||||| |||||||||||||| |||||||||
Sbjct: 336 cccttctttaccaacaaggtcgtccagcagtac 368
Score = 131 bits (66), Expect = 1e-028
Identities = 171/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 459 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 518
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 519 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 578
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| | |||||||| || | ||| | ||||||||| |
Sbjct: 579 gcccagagcttcgagtataactatgctgacttcattcctgttctcaggccgttcctcaga 638
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 639 gggtacctgaagatctgcaaggaggt 664
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 197 gtgcccgtcttcgggaactggctgcaggtcggcgacgacctcaa 240
|||||| |||||||||||||||||||||| || ||||| |||||
Sbjct: 32 gtgcccatcttcgggaactggctgcaggtgggggacgatctcaa 75
>gb|BG275289.1|BG275289 NXSI_142_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_142_A01 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 321
Score = 151 bits (76), Expect = 1e-034
Identities = 212/260 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 55 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 114
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 115 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 174
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||| ||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 175 aagancctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 234
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||| || ||| ||||| |||||||||
Sbjct: 235 gagttccgccccgagcggttcttcgaggaggagaannacaccgaagccaatggcaacgac 294
Query: 1382 ttcaggtacctgcccttcgg 1401
|||| | ||||||||||||
Sbjct: 295 ttcaaattcctgcccttcgg 314
>gb|CX648893.1|CX648893 COLD1_31_D03.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_D03_A029 5', mRNA sequence
Length = 518
Score = 151 bits (76), Expect = 1e-034
Identities = 149/172 (86%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtg-gagttcggctcccgcacccgcaacgtggtcttcg 401
|||||| || ||||||||||| ||| |||||||| || || || || |||||||| ||||
Sbjct: 124 ggaggttctgcacacgcagggggtgtgagttcgggtcgcggactcggaacgtggtgttcg 183
Query: 402 acatcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgca 461
| || ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| |
Sbjct: 184 atatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcgga 243
Query: 462 agatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtgcagca 513
||||||| || |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 244 agatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtccagca 295
Score = 89.8 bits (45), Expect = 4e-016
Identities = 109/129 (84%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggat-catgttcgaccggcgcttcga 666
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| ||||||||||
Sbjct: 390 cgcctgcagctggtgatgtataacatcatgtacaggatgtatgtttgacaggcgcttcga 449
Query: 667 gagcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcct 726
|||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 450 gagcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcct 509
Query: 727 cgcgcagag 735
|| |||||
Sbjct: 510 ggcccagag 518
>gb|BG276034.1|BG276034 NXSI_147_H11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_147_H11 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 339
Score = 145 bits (73), Expect = 7e-033
Identities = 115/129 (89%)
Strand = Plus / Plus
Query: 389 aacgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggc 448
|||||||| ||||| || ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 13 aacgtggtgttcgatatattcacggggaaggggcaggacatggtgttcacggtgtacggc 72
Query: 449 gaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtg 508
|| || ||||| |||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 73 gagcattggcggaagatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtc 132
Query: 509 cagcagtac 517
|||||||||
Sbjct: 133 cagcagtac 141
Score = 64.0 bits (32), Expect = 2e-008
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 609 gcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgaga 668
|||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||
Sbjct: 233 gcctgcagctggtgatgtataacatcatgtacnggatgatgtttgacannngcttcgaga 292
Query: 669 gcatggacgacccgctcttcctccgcctcagggcgctcaacggcg 713
|| | ||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 293 gcgngnncgacccgctcttcctccgcctcaaggctctcaatggcg 337
>gb|BG319095.1|BG319095 NXPV_023_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_023_F10 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 406
Score = 145 bits (73), Expect = 7e-033
Identities = 115/129 (89%)
Strand = Plus / Plus
Query: 389 aacgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggc 448
|||||||| ||||| || ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 16 aacgtggtgttcgatatattcacggggaaggggcaggacatggtgttcacggtgtacggc 75
Query: 449 gaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtg 508
|| || ||||| |||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 76 gagcattggcggaagatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtc 135
Query: 509 cagcagtac 517
|||||||||
Sbjct: 136 cagcagtac 144
Score = 75.9 bits (38), Expect = 5e-012
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| | ||||||||
Sbjct: 235 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacnngngcttcgag 294
Query: 668 agcatggacgacccgctcttcctccgcctca 698
||| ||||||||||||||||||||||||||
Sbjct: 295 agcgaggacgacccgctcttcctccgcctca 325
>gb|DR088359.1|DR088359 RTAL1_1_D08.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_1_D08_A029 3', mRNA sequence
Length = 585
Score = 145 bits (73), Expect = 7e-033
Identities = 234/288 (81%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1221 acgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcct 1280
|||||||||||||||| || ||||| || || || |||||||||||||| || |||||||
Sbjct: 1 acgacgccaagctcgggggctacgatattccggcagagagcaagatcctggtgaacgcct 60
Query: 1281 ggtacctcgccaacaaccccgac-agytggaggcggcccgaggagttccggcccgagcga 1339
||| | ||||||||||||| | | |||| | |||||||||||||| ||||||||
Sbjct: 61 ggtggttggccaacaaccccgcccaactggaagaaccccgaggagttccgccccgagcgg 120
Query: 1340 ttcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttc 1399
||| ||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||||
Sbjct: 121 ttcttcgaggaggagaagcacaccgaagccaatggcaacgacttcaaattcctgcccttc 180
Query: 1400 ggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcacc 1459
|| || || | ||||||||||| || ||||| || || ||||| |||||| || ||
Sbjct: 181 ggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcctcgcactctcc 240
Query: 1460 atcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 241 atcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 288
>gb|BF221256.1|BF221256 NXCI_156_F01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_156_F01 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 391
Score = 143 bits (72), Expect = 3e-032
Identities = 181/219 (82%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 141 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 200
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 201 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 260
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 261 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 320
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcac 1360
|||||||| |||||||| ||| |||||||||||||||||
Sbjct: 321 gagttccgccccgagcggttcttcgaggaggagaagcac 359
Score = 40.2 bits (20), Expect = 0.30
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1004 gagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaaccacc 1055
||||| |||||||||||||| || |||| | || ||||||||||||||||
Sbjct: 3 gagacaacgctgtggtcgatggaatggggaatagcggagctggtgaaccacc 54
>gb|BF609556.1|BF609556 NXSI_046_B06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_046_B06 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 329
Score = 143 bits (72), Expect = 3e-032
Identities = 197/241 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 63 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 122
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 123 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 182
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||| || || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 183 aagannctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 242
Query: 1322 gagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgac 1381
|||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 243 gagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgac 302
Query: 1382 t 1382
|
Sbjct: 303 t 303
>gb|BQ702923.1|BQ702923 NXSI_134_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_134_C08 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 487
Score = 141 bits (71), Expect = 1e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 172 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 231
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 232 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 291
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 292 gcccagagcttcgagtataactatggtgacttcattcctgttctcagnccgttcctcaga 351
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 352 gggtacctgaagatctgcaaggaggt 377
Score = 91.7 bits (46), Expect = 9e-017
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 440 gtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaac 499
||||||||||| || ||||| |||||||| || |||||||| ||||||||||| ||||||
Sbjct: 4 gtgtacggcgagcattggcggaagatgcggcggatcatgacggtgcccttctttaccaac 63
Query: 500 aaggtcgtgcagcagtac 517
|||||||| |||||||||
Sbjct: 64 aaggtcgtccagcagtac 81
>gb|CF387165.1|CF387165 RTDR1_11_A09.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_11_A09_A015 3', mRNA
sequence
Length = 574
Score = 141 bits (71), Expect = 1e-031
Identities = 235/290 (81%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1219 ccacgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgc 1278
|||||||||||||||||| || ||||| || || || |||||||||||||| || |||||
Sbjct: 1 ccacgacgccaagctcgggggctacgatattccggcagagagcaagatcctggtgaacgc 60
Query: 1279 ctggtacctcgccaacaacccc-gacagytggaggcggcccgaggagttccggcccgagc 1337
||||| | |||||||||||| | || ||| | |||||||||||||| |||||||
Sbjct: 61 ctggtggttggccaacaacccccgccactgggaagaaccccgaggagttccgccccgagc 120
Query: 1338 gattcytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgccct 1397
| ||| ||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||
Sbjct: 121 ggttcttcgaggaggagaagcacaccgaagccaatggcaacgacttcaaattcctgccct 180
Query: 1398 tcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatca 1457
|||| || || | ||||||||||| || ||||| || || ||||| |||||| ||
Sbjct: 181 tcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcctcgcactct 240
Query: 1458 ccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 241 ccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 290
>gb|DN614015.1|DN614015 EST967065 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABZ09, mRNA sequence
Length = 276
Score = 141 bits (71), Expect = 1e-031
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| |||||||||||||||
Sbjct: 184 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgaccggcgcttcgag 125
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | || |||||
Sbjct: 124 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagtcgcctg 65
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| |||||||||||
Sbjct: 64 gcccagagcttcgagtataactatggcgacttcat 30
>gb|DT629014.1|DT629014 EST1155584 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMD463 5' end, mRNA sequence
Length = 276
Score = 141 bits (71), Expect = 1e-031
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| |||||||||||||||
Sbjct: 93 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgaccggcgcttcgag 152
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | || |||||
Sbjct: 153 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagtcgcctg 212
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| |||||||||||
Sbjct: 213 gcccagagcttcgagtataactatggcgacttcat 247
>gb|CF388062.1|CF388062 RTDR1_17_F06.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_17_F06_A015 5', mRNA
sequence
Length = 715
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 42 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 101
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 102 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 161
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 162 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 221
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 222 gggtacctgaagatctgcaaggaggt 247
Score = 87.8 bits (44), Expect = 1e-015
Identities = 280/359 (77%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 339 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 398
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 399 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 458
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| | | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 459 gaatggggactcgccaaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 518
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 519 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 578
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 579 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcgattcccctgcttgtg 638
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaa 1263
|| ||||||||||| ||| | |||||||||||||| |||||||| || ||||| |||||
Sbjct: 639 cctcacatgaaccttcaccaggccaagctcggcggctacgacattccggccgaaagcaa 697
>gb|CF391909.1|CF391909 RTDR3_10_A12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_A12_A022 5', mRNA
sequence
Length = 745
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 30 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 89
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 90 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 149
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 150 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 209
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 210 gggtacctgaagatctgcaaggaggt 235
Score = 93.7 bits (47), Expect = 2e-017
Identities = 310/398 (77%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || || || ||||||| || |||||||| |||||
Sbjct: 327 aagtgcgctattgatcacatcttcgaagctgaggagaagggcgaaatcaacgaagacaat 386
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 387 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 446
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 447 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 506
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 507 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 566
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 567 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcgattcccctgcttgtg 626
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
|| ||||||||||| ||| | |||||||||||||| |||||||| || ||||| |||||
Sbjct: 627 cctcacatgaaccttcaccaggccaagctcggcggctacgacattccggccgaaagcaaa 686
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccga 1302
|| || || || ||||||| || |||||||| |||||
Sbjct: 687 atactggtgaatgcctggtttctggccaacaatcccga 724
>gb|CF667497.1|CF667497 RTCNT1_30_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_30_D11_A029 5', mRNA sequence
Length = 801
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 229 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 288
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 289 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 348
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 349 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 408
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 409 gggtacctgaagatctgcaaggaggt 434
Score = 137 bits (69), Expect = 2e-030
Identities = 114/129 (88%)
Strand = Plus / Plus
Query: 389 aacgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggc 448
|||||||| ||| | || ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 10 aacgtggtgttctatatattcacggggaaggggcaggacatggtgttcacggtgtacggc 69
Query: 449 gaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtg 508
|| || ||||| |||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 70 gagcattggcggaagatgcggcggatcatgacggtgcccttctttaccaacaaggtcgtc 129
Query: 509 cagcagtac 517
|||||||||
Sbjct: 130 cagcagtac 138
Score = 71.9 bits (36), Expect = 8e-011
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || || ||||| |||||
Sbjct: 526 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaataaacgaagacaat 585
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 586 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 645
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaag 1072
|| |||| |||| || | ||||||||||| ||||| |||||||||
Sbjct: 646 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaag 693
>gb|CF669309.1|CF669309 RTCNT1_42_F10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_F10_A029 3', mRNA sequence
Length = 611
Score = 139 bits (70), Expect = 4e-031
Identities = 238/293 (81%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1217 ctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaac 1276
|||||||||||||||||||| || ||||| || || || |||||||||||||| || |||
Sbjct: 3 ctccacgacgccaagctcgggggctacgatattccggcagagagcaagatcctggtgaac 62
Query: 1277 gcctggtacctcgccaacaacccc-gacagytggaggcggcccgaggagttccggcccga 1335
||||||| | |||||||||||| | || |||| | |||||||||||||| |||||
Sbjct: 63 gcctggtggttggccaacaacccccgccaactggaagaaccccgaggagttccgccccga 122
Query: 1336 gcgattcytcgaggaggagaagcacgtcgaggccaacg-gcaacgacttcaggtacctgc 1394
||| ||| ||||||||||||||||| ||| ||||| | |||||||||||| | |||||
Sbjct: 123 gcggttcttcgaggaggagaagcacaccgaagccaatgngcaacgacttcaaattcctgc 182
Query: 1395 ccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggca 1454
||||||| || || | ||||||||||| || ||||| || || ||||| ||||||
Sbjct: 183 ccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcctcgcac 242
Query: 1455 tcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 243 tctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 295
>gb|CF670337.1|CF670337 RTCNT1_49_C10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_49_C10_A029 5', mRNA sequence
Length = 696
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 18 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 77
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 78 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 137
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 138 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 197
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 198 gggtacctgaagatctgcaaggaggt 223
Score = 95.7 bits (48), Expect = 6e-018
Identities = 281/359 (78%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || || || ||||||| || |||||||| |||||
Sbjct: 315 aagtgcgctattgatcacatcttcgaagctgaggagaagggcgaaatcaacgaagacaat 374
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 375 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 434
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 435 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 494
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 495 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 554
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 555 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcgattcccctgcttgtg 614
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaa 1263
|| ||||||||||| ||| | |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 615 cctcacatgaaccttcaccaggccaagctcggcggctacgacatcccggccgaaagcaa 673
>gb|DN454332.1|DN454332 EST950131 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG245 5' end, mRNA sequence
Length = 910
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 177 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 236
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 237 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 296
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 297 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 356
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 357 gggtacctgaagatctgcaaggaggt 382
Score = 101 bits (51), Expect = 9e-020
Identities = 311/398 (78%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || || ||||| |||||
Sbjct: 474 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaataaacgaagacaat 533
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 534 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 593
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 594 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 653
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 654 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 713
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 714 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcaattcccctgcttgtg 773
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
|| ||||||||||| ||| | |||||||||||||| |||||||| || |||||||||||
Sbjct: 774 cctcacatgaaccttcaccaggccaagctcggcggctacgacattccggccgagagcaaa 833
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccga 1302
|| || || || ||||||| || |||||||| |||||
Sbjct: 834 atactggtgaatgcctggtttctggccaacaatcccga 871
Score = 91.7 bits (46), Expect = 9e-017
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 432 tgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatcatgaccgtgcccttct 491
||||||| |||||| |||| || ||||| |||||||| || |||||||| ||||||||||
Sbjct: 1 tgttcacggtgtacagcgagcattggcggaagatgcggcggatcatgacggtgcccttct 60
Query: 492 tcaccaacaaggtcgtgcagcagtac 517
| |||||||||||||| |||||||||
Sbjct: 61 ttaccaacaaggtcgtccagcagtac 86
>gb|DN456247.1|DN456247 EST952046 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGM94 5' end, mRNA sequence
Length = 572
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 254 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 313
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 314 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 373
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 374 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 433
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 434 gggtacctgaagatctgcaaggaggt 459
Score = 137 bits (69), Expect = 2e-030
Identities = 114/129 (88%)
Strand = Plus / Plus
Query: 389 aacgtggtcttcgacatcttcacggacaaggggcaggacatggtgttcaccgtgtacggc 448
|||||||| ||||| || ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 35 aacgtggtgttcgatatattcacggggaaggggcaggacatggtgttcacggtgtacggc 94
Query: 449 gaccactggcgcaagatgcgccgcatcatgaccgtgcccttcttcaccaacaaggtcgtg 508
|| || ||||| |||||||| || |||||||| ||||||||||| |||| |||||||||
Sbjct: 95 gagcattggcggaagatgcggcggatcatgacggtgcccttctttaccatcaaggtcgtc 154
Query: 509 cagcagtac 517
|||||||||
Sbjct: 155 cagcagtac 163
>gb|DR016895.1|DR016895 STRS1_12_G05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_12_G05_A034 5', mRNA sequence
Length = 876
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 197 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 256
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 257 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 316
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 317 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 376
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 377 gggtacctgaagatctgcaaggaggt 402
Score = 115 bits (58), Expect = 6e-024
Identities = 92/102 (90%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 416 aaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaagatgcgccgcatc 475
|||||||||||| |||||||||| ||||||||||| || ||||| |||||||| || |||
Sbjct: 6 aaggggcaggac-tggtgttcacggtgtacggcgagcattggcggaagatgcggcggatc 64
Query: 476 atgaccgtgcccttcttcaccaacaaggtcgtgcagcagtac 517
||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 65 atgacggtgcccttctttaccaacaaggtcgtccagcagtac 106
Score = 79.8 bits (40), Expect = 3e-013
Identities = 136/168 (80%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 494 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 553
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 554 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 613
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaag 1072
|| |||| |||| || | ||||||||||| ||||| |||||||||
Sbjct: 614 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaag 661
Score = 73.9 bits (37), Expect = 2e-011
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
||||| ||||| ||||||||||| ||| | |||||||||||||| |||||||| || |||
Sbjct: 784 ctgcttgtgcctcacatgaaccttcaccaggccaagctcggcggctacgacattccggcc 843
Query: 1256 gagagcaa 1263
||||||||
Sbjct: 844 gagagcaa 851
>gb|DR385758.1|DR385758 RTHG1_10_E04.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_10_E04_A029 5', mRNA sequence
Length = 799
Score = 139 bits (70), Expect = 4e-031
Identities = 172/206 (83%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 5 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 64
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 65 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 124
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 125 gcccagagcttcgagtataactatggtgacttcattcctgttctcaggccgttcctcaga 184
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 185 gggtacctgaagatctgcaaggaggt 210
Score = 79.8 bits (40), Expect = 3e-013
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 1196 ctgctggtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgcc 1255
||||| ||||| ||||||||||| ||| | |||||||||||||| |||||||| || |||
Sbjct: 593 ctgcttgtgcctcacatgaaccttcaccaggccaagctcggcggctacgacattccggcc 652
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccga 1302
|||||||| || || || || ||||||| || |||||||| |||||
Sbjct: 653 gagagcaaaatactggtgaatgcctggtttctggccaacaatcccga 699
Score = 79.8 bits (40), Expect = 3e-013
Identities = 136/168 (80%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 302 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 361
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 362 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 421
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaag 1072
|| |||| |||| || | ||||||||||| ||||| |||||||||
Sbjct: 422 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaag 469
>gb|CF476268.1|CF476268 RTWW2_22_D04.b1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_22_D04_A021 3', mRNA sequence
Length = 570
Score = 137 bits (69), Expect = 2e-030
Identities = 223/276 (80%)
Strand = Plus / Plus
Query: 1232 ctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgcc 1291
||||| || ||||| || || || |||||||||||||| || |||||||||| | |||
Sbjct: 3 ctcgggggctacgatattccggcagagagcaagatcctggtgaacgcctggtggttggcc 62
Query: 1292 aacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgaggag 1351
|||||||||| || |||| | |||||||||||||| |||||||| ||| ||||||||
Sbjct: 63 aacaaccccgccaactggaagaaccccgaggagttccgccccgagcggttcttcgaggag 122
Query: 1352 gagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgc 1411
||||||||| ||| ||||| ||||||||||||| | |||||||||||| || || |
Sbjct: 123 gagaagcacaccgaagccaatggcaacgacttcaaattcctgcccttcggtgtggggagg 182
Query: 1412 aggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctc 1471
||||||||||| || ||||| || || ||||| |||||| || ||||||| | ||
Sbjct: 183 aggagctgcccgggaatcattctggcgctgcctctcctcgcactctccatcggaagactt 242
Query: 1472 gtccagaacttcgagctgctgccgccgcccgggcag 1507
|| ||||||||| | || ||||||||||||||||||
Sbjct: 243 gttcagaacttccaccttctgccgccgcccgggcag 278
>gb|CF394836.1|CF394836 RTDS2_8_G08.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_G08_A021 3', mRNA sequence
Length = 564
Score = 135 bits (68), Expect = 7e-030
Identities = 225/279 (80%)
Strand = Plus / Plus
Query: 1229 aagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctc 1288
|||||||| || ||||| || || || ||||| |||||||| || |||||||||| |
Sbjct: 1 aagctcgggggctacgatattccggcagagagtaagatcctggtgaacgcctggtggttg 60
Query: 1289 gccaacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgag 1348
||||||||||||| || |||| | |||||||||||||| |||||||| ||| |||||
Sbjct: 61 gccaacaaccccgccaactggaagaaccccgaggagttccgccccgagcggttcttcgag 120
Query: 1349 gaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggc 1408
|||||||||||| ||| ||||| ||||||||||||| | |||||||||||| || ||
Sbjct: 121 gaggagaagcacaccgaagccaatggcaacgacttcaaattcctgcccttcggtgtgggg 180
Query: 1409 cgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgc 1468
| ||||||||||| || ||||| || || ||||| |||||| || ||||||| |
Sbjct: 181 aggaggagctgcccgggaatcattctggcgctgcctctcctcgcactctccatcggaaga 240
Query: 1469 ctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||||| | || ||||||||||||||||||
Sbjct: 241 cttgttcagaacttccaccttctgccgccgcccgggcag 279
>gb|CF472357.1|CF472357 RTDS1_9_G03.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_G03_A015 3', mRNA sequence
Length = 550
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 7 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 66
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 67 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 126
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 127 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 186
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 187 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 246
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 247 ccgcccgggcag 258
>gb|CF477602.1|CF477602 RTWW3_8_G12.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_8_G12_A022 5', mRNA sequence
Length = 573
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 19 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 78
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 79 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 138
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 139 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 198
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 199 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 258
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 259 ccgcccgggcag 270
>gb|CF665311.1|CF665311 RTCNT1_15_F02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_F02_A029 3', mRNA sequence
Length = 567
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 21 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 80
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 81 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 140
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 141 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 200
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 201 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 260
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 261 ccgcccgggcag 272
>gb|DR078405.1|DR078405 RTFEPL1_4_A11.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_4_A11_A029 3', mRNA sequence
Length = 551
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 8 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 67
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 68 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 127
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 128 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 187
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 188 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 247
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 248 ccgcccgggcag 259
>gb|DR094342.1|DR094342 STRR1_14_A07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_A07_A033 3', mRNA sequence
Length = 545
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 12 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 71
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 72 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 131
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 132 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 191
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 192 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 251
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 252 ccgcccgggcag 263
>gb|DR388433.1|DR388433 RTHG1_28_F03.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_28_F03_A029 3', mRNA sequence
Length = 598
Score = 135 bits (68), Expect = 7e-030
Identities = 205/252 (81%)
Strand = Plus / Plus
Query: 1256 gagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcgg 1315
|||||||||||||| || |||||||||| | ||||||||||||| || |||| |
Sbjct: 5 gagagcaagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaac 64
Query: 1316 cccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggc 1375
|||||||||||||| |||||||| ||| ||||||||||||||||| ||| ||||| |||
Sbjct: 65 cccgaggagttccgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggc 124
Query: 1376 aacgacttcaggtacctgcccttcggcgtcggccgcaggagctgccccgggatcatcctc 1435
|||||||||| | |||||||||||| || || | ||||||||||| || ||||| ||
Sbjct: 125 aacgacttcaaattcctgcccttcggtgtggggaggaggagctgcccgggaatcattctg 184
Query: 1436 gccctgcccatcctcggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccg 1495
|| ||||| |||||| || ||||||| | || || ||||||||| | || ||||||
Sbjct: 185 gcgctgcctctcctcgcactctccatcggaagacttgttcagaacttccaccttctgccg 244
Query: 1496 ccgcccgggcag 1507
||||||||||||
Sbjct: 245 ccgcccgggcag 256
>gb|BE186963.1|BE186963 NXNV_158_G09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_158_G09 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 306
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 51 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 110
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 111 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 170
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 171 gcccagagcttcgagtataactatggtgacttcat 205
>gb|DN615192.1|DN615192 EST968242 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSACC93, mRNA sequence
Length = 276
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 184 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 125
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 124 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 65
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 64 gcccagagcttcgagtataactatggtgacttcat 30
>gb|DT629571.1|DT629571 EST1156141 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMDB15 5' end, mRNA sequence
Length = 276
Score = 133 bits (67), Expect = 3e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||||||||||
Sbjct: 93 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgcttcgag 152
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 153 agcgaggacgacccgctcttcctccgcctcaaggctctcaatggcgagaggagccgcctg 212
Query: 728 gcgcagagcttcgagtacaactacggcgacttcat 762
|| |||||||||||||| ||||| || ||||||||
Sbjct: 213 gcccagagcttcgagtataactatggtgacttcat 247
>gb|BE762259.1|BE762259 NXCI_067_C10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_067_C10 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 361
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 37 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 96
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 97 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 156
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 157 gatgcgcaggatcatgactgtgcctttctt 186
>gb|BE762275.1|BE762275 NXCI_067_E07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_067_E07 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 381
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 37 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 96
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 97 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 156
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 157 gatgcgcaggatcatgactgtgcctttctt 186
>gb|BF517288.1|BF517288 NXSI_012_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_012_F04 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcctttctt 439
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|CF385486.1|CF385486 RTDR1_4_A06.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_4_A06_A015 3', mRNA
sequence
Length = 615
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 292 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 233
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 232 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 173
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 172 gatgcgcaggatcatgactgtgcctttctt 143
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 429 ttcgggaactggttgcaggtcgg 407
>gb|CO367943.1|CO367943 RTK1_37_D12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_37_D12_A029 5', mRNA sequence
Length = 737
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 296 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 355
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 356 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 415
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 416 gatgcgcaggatcatgactgtgcctttctt 445
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 626 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 685
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 686 gagctttgagtacaattatggggatttcattcccat 721
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 159 ttcgggaactggttgcaggtcgg 181
>gb|CV035647.1|CV035647 RTNACL1_41_B03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_41_B03_A029 5', mRNA sequence
Length = 705
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 252 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 311
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 312 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 371
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 372 gatgcgcaggatcatgactgtgcctttctt 401
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 582 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 641
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 642 gagctttgagtacaattatggggatttcattcccat 677
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 115 ttcgggaactggttgcaggtcgg 137
>gb|CV035656.1|CV035656 RTNACL1_41_C03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_41_C03_A029 5', mRNA sequence
Length = 800
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 258 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 317
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 318 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 377
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 378 gatgcgcaggatcatgactgtgcctttctt 407
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 588 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 647
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 648 gagctttgagtacaattatggggatttcattcccat 683
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 121 ttcgggaactggttgcaggtcgg 143
>gb|CX648414.1|CX648414 COLD1_28_B08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B08_A029 5', mRNA sequence
Length = 749
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 307 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 366
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 367 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 426
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 427 gatgcgcaggatcatgactgtgcctttctt 456
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 637 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 696
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 697 gagctttgagtacaattatggggatttcattcccat 732
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 170 ttcgggaactggttgcaggtcgg 192
>gb|DR069698.1|DR069698 RTDK1_8_H09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_H09_A029 5', mRNA sequence
Length = 789
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 34 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 93
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 94 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 153
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 154 gatgcgcaggatcatgactgtgcctttctt 183
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 667 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 726
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 727 aatagcggagctggtgaaccacc 749
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 364 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 423
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 424 gagctttgagtacaattatggggatttcattcccat 459
>gb|DR069823.1|DR069823 RTDK1_9_D10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_D10_A029 5', mRNA sequence
Length = 648
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 294 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 353
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 354 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 413
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 414 gatgcgcaggatcatgactgtgcctttctt 443
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 157 ttcgggaactggttgcaggtcgg 179
>gb|DR081652.1|DR081652 RTFEPL1_31_E09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_31_E09_A029 3', mRNA sequence
Length = 652
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 397 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 338
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 337 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 278
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 277 gatgcgcaggatcatgactgtgcctttctt 248
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 534 ttcgggaactggttgcaggtcgg 512
>gb|DR091337.1|DR091337 RTAL1_20_H12.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_20_H12_A029 5', mRNA sequence
Length = 247
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || |||| |||||| ||||||||||| || || || || |||||||| |||||
Sbjct: 97 ggaggttctgcacatgcagggggtggagttcgggtcgcggactcggaacgtggtgttcga 156
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|| ||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 157 tatattcacggggaaggggcaggacatggtgttcacggtgtacggcgagcattggcggaa 216
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
|||||| || |||||||| |||||||||||
Sbjct: 217 gatgcggcggatcatgacggtgcccttctt 246
>gb|DR099065.1|DR099065 STRR1_52_H11.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_52_H11_A033 3', mRNA sequence
Length = 751
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 440 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 381
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 380 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 321
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 320 gatgcgcaggatcatgactgtgcctttctt 291
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 577 ttcgggaactggttgcaggtcgg 555
>gb|DR385406.1|DR385406 RTHG1_8_A11.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_A11_A029 5', mRNA sequence
Length = 675
Score = 131 bits (66), Expect = 1e-028
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 322 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 381
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 382 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 441
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||||| ||||| |||||
Sbjct: 442 gatgcgcaggatcatgactgtgcctttctt 471
>gb|BE761856.1|BE761856 NXCI_070_F06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_070_F06 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 438
Score = 129 bits (65), Expect = 4e-028
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 195 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 254
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 255 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 314
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| |||||||| ||||| |||||
Sbjct: 315 gatgcgcnnnatcatgactgtgcctttctt 344
>gb|CF394939.1|CF394939 RTDS2_8_G08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_8_G08_A021 5', mRNA sequence
Length = 571
Score = 129 bits (65), Expect = 4e-028
Identities = 222/276 (80%)
Strand = Plus / Plus
Query: 1232 ctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgcc 1291
||||| || ||||| || || || ||||| |||||||| || |||||||||| | |||
Sbjct: 1 ctcgggggctacgatattccggcagagagtaagatcctggtgaacgcctggtggttggcc 60
Query: 1292 aacaaccccgacagytggaggcggcccgaggagttccggcccgagcgattcytcgaggag 1351
|||||||||| || |||| | |||||||||||||| |||||||| ||| ||||||||
Sbjct: 61 aacaaccccgccaactggaagaaccccgaggagttccgccccgagcggttcttcgaggag 120
Query: 1352 gagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcggcgtcggccgc 1411
||||||||| ||| ||||| ||||||||||||| | |||||||||||| || || |
Sbjct: 121 gagaagcacaccgaagccaatggcaacgacttcaaattcctgcccttcggtgtggggagg 180
Query: 1412 aggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccatcggtcgcctc 1471
||||||||||| || ||||| || || ||||| |||||| || ||||||| | ||
Sbjct: 181 aggagctgcccgggaatcattctggcgctgcctctcctcgcactctccatcggaagactt 240
Query: 1472 gtccagaacttcgagctgctgccgccgcccgggcag 1507
|| ||||||||| | || ||||||||||||||||||
Sbjct: 241 gttcagaacttccaccttctgccgccgcccgggcag 276
>gb|BI644029.1|BI644029 NXPV_127_B12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_127_B12 5' similar to Arabidopsis
thaliana sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 217
Score = 127 bits (64), Expect = 2e-027
Identities = 143/171 (83%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 20 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 79
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 80 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 139
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggag 1354
| |||| | |||||||||||||| |||||||| ||| |||||||||||
Sbjct: 140 aactggaagaaccccgaggagttccgccccgagcggttcttcgaggaggag 190
>gb|CF397587.1|CF397587 RTDS3_4_B03.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_4_B03_A022 5', mRNA sequence
Length = 693
Score = 127 bits (64), Expect = 2e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 642 ggatcatgttcgaccggcgcttcgagagcatggacgacccgctcttcctccgcctcaggg 701
|||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 1 ggatgatgtttgacaggcgcttcgagagcgaggacgacccgctcttcctccgcctcaagg 60
Query: 702 cgctcaacggcgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttca 761
| ||||| |||||| | |||||||| || |||||||||||||| ||||| || |||||||
Sbjct: 61 ctctcaatggcgagaggagccgcctggcccagagcttcgagtataactatggtgacttca 120
Query: 762 tccccatcctccgtccgttcctccgcggctacctcagggtctgcaaggaggt 813
| || | ||| | ||||||||| | || ||||| | | |||||||||||||
Sbjct: 121 ttcctgttctcaggccgttcctcagagggtacctgaagatctgcaaggaggt 172
Score = 101 bits (51), Expect = 9e-020
Identities = 311/398 (78%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || || ||||| |||||
Sbjct: 264 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaataaacgaagacaat 323
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 324 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 383
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaagctgcggcaggag 1084
|| |||| |||| || | ||||||||||| ||||| ||||||||| | || |||
Sbjct: 384 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaagatccgcgccgag 443
Query: 1085 ctggacacggtgctcgggccgggccaccagatcacggagccggacacgcacaacctcccc 1144
|||||| | || |||||| |||| || | |||||||||||||| ||| | |||
Sbjct: 444 ctggacgctgtaatcgggcggggcgtccccttgacggagccggacactaccaaattgccc 503
Query: 1145 tacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctggtg 1204
||||| || || ||| |||| || || ||||| || | ||||| || || ||||| |||
Sbjct: 504 tacctccaagccgtggtcaaagaaaccctgcgtctccacatggcgattcccctgcttgtg 563
Query: 1205 ccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaag 1264
|| ||||||||||| ||| | |||||||||||||| |||||||| || |||||||||||
Sbjct: 564 cctcacatgaaccttcaccaggccaagctcggcggctacgacattccggccgagagcaaa 623
Query: 1265 atcctcgtcaacgcctggtacctcgccaacaaccccga 1302
|| || || || ||||||| || |||||||| |||||
Sbjct: 624 atactggtgaatgcctggtttctggccaacaatcccga 661
>gb|DR049736.1|DR049736 RTBOR1_18_E10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_E10_A029 5', mRNA sequence
Length = 613
Score = 127 bits (64), Expect = 2e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 642 ggatcatgttcgaccggcgcttcgagagcatggacgacccgctcttcctccgcctcaggg 701
|||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 166 ggatgatgtttgacaggcgcttcgagagcgaggacgacccgctcttcctccgcctcaagg 225
Query: 702 cgctcaacggcgagcgcagccgcctcgcgcagagcttcgagtacaactacggcgacttca 761
| ||||| |||||| | |||||||| || |||||||||||||| ||||| || |||||||
Sbjct: 226 ctctcaatggcgagaggagccgcctggcccagagcttcgagtataactatggtgacttca 285
Query: 762 tccccatcctccgtccgttcctccgcggctacctcagggtctgcaaggaggt 813
| || | ||| | ||||||||| | || ||||| | | |||||||||||||
Sbjct: 286 ttcctgttctcaggccgttcctcagagggtacctgaagatctgcaaggaggt 337
Score = 71.9 bits (36), Expect = 8e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || ||||| | ||||| || |||||||| |||||
Sbjct: 429 aagtgcgctattgatcacatcttcgaagcacatgacaagggcgaaatcaacgaagacaat 488
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagac 1008
|| |||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 489 gtcctctacatcgtggagaacattaatgttgcagcaatcgagac 532
>gb|AH014354.1|SEG_AY764801S Pinus taeda isolate 16 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2493
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2012 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2071
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2072 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2131
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2132 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2191
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2192 gagttccg 2199
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2212 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2271
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2272 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2329
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1864 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1923
Query: 1054 cc 1055
||
Sbjct: 1924 cc 1925
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764801.1|AY764801S1 Pinus taeda isolate 16 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014355.1|SEG_AY764805S Pinus taeda isolate 6 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2495
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2014 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2073
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2074 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2133
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2134 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2193
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2194 gagttccg 2201
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2214 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2273
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2274 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2331
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1866 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1925
Query: 1054 cc 1055
||
Sbjct: 1926 cc 1927
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764805.1|AY764805S1 Pinus taeda isolate 6 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014356.1|SEG_AY764809S Pinus taeda isolate 4 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2493
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2012 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2071
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2072 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2131
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2132 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2191
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2192 gagttccg 2199
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2212 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2271
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2272 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2329
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1864 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1923
Query: 1054 cc 1055
||
Sbjct: 1924 cc 1925
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764809.1|AY764809S1 Pinus taeda isolate 4 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014357.1|SEG_AY764813S Pinus taeda isolate 26 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764813.1|AY764813S1 Pinus taeda isolate 26 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014358.1|SEG_AY764817S Pinus taeda isolate 9 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764817.1|AY764817S1 Pinus taeda isolate 9 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014359.1|SEG_AY764821S Pinus taeda isolate 23 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2495
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2014 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgtatggcgatcccgttgctc 2073
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2074 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2133
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2134 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2193
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2194 gagttccg 2201
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2214 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctagcgctgcctctcct 2273
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2274 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2331
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1866 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1925
Query: 1054 cc 1055
||
Sbjct: 1926 cc 1927
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764821.1|AY764821S1 Pinus taeda isolate 23 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014360.1|SEG_AY764825S Pinus taeda isolate 22 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764825.1|AY764825S1 Pinus taeda isolate 22 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014361.1|SEG_AY764829S Pinus taeda isolate 32 cinnamate 4-hydroxylase gene, partial cds;
and cinnamate 4-hydroxylase gene, exons 1 through 3, 3
and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764829.1|AY764829S1 Pinus taeda isolate 32 exon 1 ; and cinnamate 4-hydroxylase gene,
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014362.1|SEG_AY764833S Pinus taeda isolate 18 cinnamate 4-hydroxylase gene, partial cds;
and cinnamate 4-hydroxylase gene, exons 1 through 3, 3
and partial cds
Length = 2503
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2022 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2081
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2082 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2141
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2142 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2201
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2202 gagttccg 2209
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2222 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2281
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2282 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2339
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1874 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1933
Query: 1054 cc 1055
||
Sbjct: 1934 cc 1935
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764833.1|AY764833S1 Pinus taeda isolate 18 exon 1 ; and cinnamate 4-hydroxylase gene,
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014363.1|SEG_AY764837S Pinus taeda isolate 21 cinnamate 4-hydroxylase gene, partial cds;
and cinnamate 4-hydroxylase gene, exons 1 through 3, 3
and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764837.1|AY764837S1 Pinus taeda isolate 21 exon 1 ; and cinnamate 4-hydroxylase gene,
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014364.1|SEG_AY764841S Pinus taeda isolate 31 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764841.1|AY764841S1 Pinus taeda isolate 31 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014365.1|SEG_AY764845S Pinus taeda isolate 5 cinnamate 4-hydroxylase gene, partial cds;
and cinnamate 4-hydroxylase gene, exons 1 through 3, 3
and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764845.1|AY764845S1 Pinus taeda isolate 5 exon 1 ; and cinnamate 4-hydroxylase gene,
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014366.1|SEG_AY764849S Pinus taeda isolate 15 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764849.1|AY764849S1 Pinus taeda isolate 15 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014367.1|SEG_AY764853S Pinus taeda isolate 20 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764853.1|AY764853S1 Pinus taeda isolate 20 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014368.1|SEG_AY764857S Pinus taeda isolate 12 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2495
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2014 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgtatggcgatcccgttgctc 2073
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2074 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2133
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2134 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2193
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2194 gagttccg 2201
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2214 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2273
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2274 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2331
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1866 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1925
Query: 1054 cc 1055
||
Sbjct: 1926 cc 1927
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764857.1|AY764857S1 Pinus taeda isolate 12 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014369.1|SEG_AY764861S Pinus taeda isolate 24 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764861.1|AY764861S1 Pinus taeda isolate 24 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014370.1|SEG_AY764865S Pinus taeda isolate 11 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764865.1|AY764865S1 Pinus taeda isolate 11 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014371.1|SEG_AY764869S Pinus taeda isolate 7 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 48.1 bits (24), Expect = 0.001
Identities = 78/96 (81%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| ||||| | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagccgattagccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764869.1|AY764869S1 Pinus taeda isolate 7 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014372.1|SEG_AY764873S Pinus taeda isolate 25 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 48.1 bits (24), Expect = 0.001
Identities = 78/96 (81%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| ||||| | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagccgattagccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
Score = 36.2 bits (18), Expect = 4.7
Identities = 93/118 (78%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||| ||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgccagggcag 2328
>gb|AY764873.1|AY764873S1 Pinus taeda isolate 25 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014373.1|SEG_AY764877S Pinus taeda isolate 13 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2493
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2012 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2071
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2072 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2131
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2132 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2191
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2192 gagttccg 2199
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2212 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2271
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2272 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2329
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1864 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1923
Query: 1054 cc 1055
||
Sbjct: 1924 cc 1925
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764877.1|AY764877S1 Pinus taeda isolate 13 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014374.1|SEG_AY764881S Pinus taeda isolate 30 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 48.1 bits (24), Expect = 0.001
Identities = 78/96 (81%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| ||||| | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagccgattagccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764881.1|AY764881S1 Pinus taeda isolate 30 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014375.1|SEG_AY764885S Pinus taeda isolate 14 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764885.1|AY764885S1 Pinus taeda isolate 14 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014376.1|SEG_AY764889S Pinus taeda isolate 10 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764889.1|AY764889S1 Pinus taeda isolate 10 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014377.1|SEG_AY764893S Pinus taeda isolate 2 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764893.1|AY764893S1 Pinus taeda isolate 2 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014378.1|SEG_AY764897S Pinus taeda isolate 3 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2493
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2012 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2071
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2072 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2131
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2132 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2191
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2192 gagttccg 2199
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2212 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2271
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2272 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2329
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1864 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1923
Query: 1054 cc 1055
||
Sbjct: 1924 cc 1925
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764897.1|AY764897S1 Pinus taeda isolate 3 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014379.1|SEG_AY764901S Pinus taeda isolate 19 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764901.1|AY764901S1 Pinus taeda isolate 19 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014380.1|SEG_AY764905S Pinus taeda isolate 28 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2502
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2021 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2080
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2081 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2140
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2141 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2200
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2201 gagttccg 2208
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2221 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2280
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2281 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2338
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1873 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1932
Query: 1054 cc 1055
||
Sbjct: 1933 cc 1934
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764905.1|AY764905S1 Pinus taeda isolate 28 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014381.1|SEG_AY764909S Pinus taeda isolate 8 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2496
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2015 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2074
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2075 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2134
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2135 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2194
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2195 gagttccg 2202
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2215 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2274
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2275 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2332
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1867 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1926
Query: 1054 cc 1055
||
Sbjct: 1927 cc 1928
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764909.1|AY764909S1 Pinus taeda isolate 8 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014382.1|SEG_AY764913S Pinus taeda isolate 17 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2503
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2022 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2081
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2082 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2141
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2142 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2201
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2202 gagttccg 2209
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2222 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2281
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2282 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2339
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1874 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1933
Query: 1054 cc 1055
||
Sbjct: 1934 cc 1935
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764913.1|AY764913S1 Pinus taeda isolate 17 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014383.1|SEG_AY764917S Pinus taeda isolate 1 cinnamate 4-hydroxylase gene, exons 1 through
3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764917.1|AY764917S1 Pinus taeda isolate 1 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014384.1|SEG_AY764921S Pinus taeda isolate 29 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2492
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2011 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2070
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2071 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2130
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2131 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2190
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2191 gagttccg 2198
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2211 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2270
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2271 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2328
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1863 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1922
Query: 1054 cc 1055
||
Sbjct: 1923 cc 1924
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764921.1|AY764921S1 Pinus taeda isolate 29 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AH014385.1|SEG_AY764925S Pinus taeda isolate 27 cinnamate 4-hydroxylase gene, exons 1
through 3 and partial cds
Length = 2493
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 101 bits (51), Expect = 9e-020
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 1142 ccctacctgcaggcggtgatcaaggagacgctgcggctgcggatggccatcccgctgctg 1201
|||||||| |||||||| | ||||| || || || || || ||||| |||||| ||||
Sbjct: 2012 ccctaccttcaggcggttgtgaaggaaacccttcgtctccgcatggcgatcccgttgctc 2071
Query: 1202 gtgccgcacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagc 1261
|| || |||||||| |||||||||||||||||||| || ||||| || || || ||||||
Sbjct: 2072 gtcccccacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagc 2131
Query: 1262 aagatcctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgag 1321
|||||||| || |||||||||| | ||||||||||||| || |||| | ||||||
Sbjct: 2132 aagatcctggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgag 2191
Query: 1322 gagttccg 1329
||||||||
Sbjct: 2192 gagttccg 2199
Score = 44.1 bits (22), Expect = 0.019
Identities = 94/118 (79%)
Strand = Plus / Plus
Query: 1390 cctgcccttcggcgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcct 1449
|||||||||||| || || | ||||||||||| || ||||| || || ||||| ||||
Sbjct: 2212 cctgcccttcggtgtggggaggaggagctgcccgggaatcattctggcgctgcctctcct 2271
Query: 1450 cggcatcaccatcggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcag 1507
|| || ||||||| | || || ||||||||| | || ||||||||||||||||||
Sbjct: 2272 cgcactctccatcggaagacttgttcagaacttccaccttctgccgccgcccgggcag 2329
Score = 44.1 bits (22), Expect = 0.019
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 994 tgcagcgatcgagaccacgctgtggtcgatcgagtgggcggtcgctgagctggtgaacca 1053
|||||| || ||||| |||||||||||||| || |||| | || ||||||||||||||
Sbjct: 1864 tgcagcaattgagacaacgctgtggtcgatggaatggggaatagcggagctggtgaacca 1923
Query: 1054 cc 1055
||
Sbjct: 1924 cc 1925
Score = 40.2 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 673 ggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctcgcgca 732
|||||||||||| |||||| |||| ||| |||||||| ||||| || || | || ||
Sbjct: 578 ggacgacccgcttttcctcaagctcaaggccctcaacggagagcgaagtcgattggccca 637
Query: 733 gagcttcgagtacaactacggcgacttcatccccat 768
|||||| |||||||| || || || ||||| |||||
Sbjct: 638 gagctttgagtacaattatggggatttcattcccat 673
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|AY764925.1|AY764925S1 Pinus taeda isolate 27 cinnamate 4-hydroxylase gene, exon 1 and
partial cds
Length = 437
Score = 127 bits (64), Expect = 2e-027
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 290 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 349
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 350 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 409
Query: 463 gatgcgccgcatcatgaccgtgcc 486
||||||| | |||||||| |||||
Sbjct: 410 gatgcgcaggatcatgactgtgcc 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 153 ttcgggaactggttgcaggtcgg 175
>gb|BF610527.1|BF610527 NXSI_059_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_059_F06 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 532
Score = 125 bits (63), Expect = 6e-027
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 1208 cacatgaacctccacgacgccaagctcggcggntacgacatccccgccgagagcaagatc 1267
|||||||| |||||||||||||||||||| || ||||| || || || ||||||||||
Sbjct: 343 cacatgaatctccacgacgccaagctcgggggctacgatattccggcagagagcaagann 402
Query: 1268 ctcgtcaacgcctggtacctcgccaacaaccccgacagytggaggcggcccgaggagttc 1327
| || |||||||||| | ||||||||||||| || |||| | ||||||||||||
Sbjct: 403 ntggtgaacgcctggtggttggccaacaaccccgccaactggaagaaccccgaggagttc 462
Query: 1328 cggcccgagcgattcytcgaggaggagaagcacgtcgaggccaacggcaacgact 1382
|| |||||||| ||| ||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 463 cgccccgagcggttcttcgaggaggagaagcacaccgaagccaatggcaacgact 517
Score = 69.9 bits (35), Expect = 3e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 973 catcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatcgagtgggc 1032
|||||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||
Sbjct: 108 catcgttgagaacatcaacgttgcagcaattgagacaacgctgtggtcgatggaatgggg 167
Query: 1033 ggtcgctgagctggtgaaccacc 1055
| || ||||||||||||||||
Sbjct: 168 aatagcggagctggtgaaccacc 190
>gb|BQ701829.1|BQ701829 NXSI_121_A07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_A07 5' similar to Arabidopsis thaliana
sequence At2g30490 cinnamate-4-hydroxylase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 309
Score = 125 bits (63), Expect = 6e-027
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 1184 atggccatcccgctgctggtgccgcacatgaacctccacgacgccaagctcggcggntac 1243
||||| |||||| |||| || || |||||||| |||||||||||||||||||| || |||
Sbjct: 81 atggcgatcccgttgctcgtcccccacatgaatctccacgacgccaagctcgggggctac 140
Query: 1244 gacatccccgccgagagcaagatcctcgtcaacgcctggtacctcgccaacaaccccgac 1303
|| || || || |||||||||||||| || |||||||||| | ||||||||||||| |
Sbjct: 141 gatattccggcagagagcaagatcctggtgaacgcctggtggttggccaacaaccccgcc 200
Query: 1304 agytggaggcggcccgaggagttccggcccgagcgattcytcgaggaggagaagcacgtc 1363
| |||| | |||||||||||||| |||||||| ||| | |||||||||||| |
Sbjct: 201 aactggaagaaccccgaggagttccgccccgagcggttcntnnnngaggagaagcacacc 260
Query: 1364 gaggccaacggcaacgact 1382
|| ||||| ||||||||||
Sbjct: 261 gaagccaatggcaacgact 279
>gb|BX678712.1|BX678712 BX678712 RS Pinus pinaster cDNA clone RS14B08, mRNA sequence
Length = 520
Score = 125 bits (63), Expect = 6e-027
Identities = 264/333 (79%)
Strand = Plus / Plus
Query: 1222 cgacgccaagctcggcggntacgacatccccgccgagagcaagatcctcgtcaacgcctg 1281
|||||||||||||| || ||||| || || || |||||||||||||| || ||||||||
Sbjct: 1 cgacgccaagctcgtgggctacgatattccggcagagagcaagatcctggtgaacgcctg 60
Query: 1282 gtacctcgccaacaaccccgacagytggaggcggcccgaggagttccggcccgagcgatt 1341
|| | |||||||| |||| || |||| | |||||||||||||| |||||||| ||
Sbjct: 61 gtggttggccaacaatcccgccaactggaagaaccccgaggagttccgccccgagcggtt 120
Query: 1342 cytcgaggaggagaagcacgtcgaggccaacggcaacgacttcaggtacctgcccttcgg 1401
| ||||||| |||||| || ||| ||||| ||||||||||||| | ||||||||||||
Sbjct: 121 cttcgaggaagagaagaacaccgaagccaatggcaacgacttcaaattcctgcccttcgg 180
Query: 1402 cgtcggccgcaggagctgccccgggatcatcctcgccctgcccatcctcggcatcaccat 1461
||||| | ||||||||||| || ||||| || || ||||| |||||| | ||||
Sbjct: 181 tgtcgggaggaggagctgcccgggaatcattctggcgctgcctctcctcgcactttccat 240
Query: 1462 cggtcgcctcgtccagaacttcgagctgctgccgccgcccgggcaggacaaggtngacac 1521
||| | || || ||||||||| | || ||||| |||||||||||| ||| || |||
Sbjct: 241 cggaagacttgttcagaacttccaccttctgcccccgcccgggcagagcaaagtggacgt 300
Query: 1522 caccgagaagggaggccagttcagtctccacat 1554
||| |||||||| || |||||||| || |||||
Sbjct: 301 cactgagaagggcgggcagttcagccttcacat 333
>gb|BX249390.1|BX249390 BX249390 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP023E02 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 672
Score = 123 bits (62), Expect = 2e-026
Identities = 170/206 (82%)
Strand = Plus / Plus
Query: 608 cgcctgcagctcatgatgtacaacaacgtataccggatcatgttcgaccggcgcttcgag 667
||||||||||| ||||||| |||| | | ||| |||| ||||| ||| |||| |||||
Sbjct: 87 cgcctgcagctggtgatgtataacatcatgtacaggatgatgtttgacaggcgattcgaa 146
Query: 668 agcatggacgacccgctcttcctccgcctcagggcgctcaacggcgagcgcagccgcctc 727
||| |||||||||||||||||||||||||| ||| ||||| |||||| | ||||||||
Sbjct: 147 agcgaggacgacccgctcttcctccgcctcaaggccctcaatggcgagaggagccgcctg 206
Query: 728 gcgcagagcttcgagtacaactacggcgacttcatccccatcctccgtccgttcctccgc 787
|| |||||||||||||| ||||| || |||||||| || | ||| | ||||||||| |
Sbjct: 207 gcccagagcttcgagtataactatggtgacttcattccggttctcaggccgttcctcaga 266
Query: 788 ggctacctcagggtctgcaaggaggt 813
|| ||||| | | |||||||||||||
Sbjct: 267 gggtacctgaagatctgcaaggaggt 292
Score = 79.8 bits (40), Expect = 3e-013
Identities = 136/168 (80%)
Strand = Plus / Plus
Query: 905 aagtgcgccattgatcacatactggaggcacagcagaagggtgagatcaacgaggacaac 964
|||||||| ||||||||||| | || |||||| | ||||| || |||||||| |||||
Sbjct: 384 aagtgcgctattgatcacatcttcgaagcacaggacaagggcgaaatcaacgaagacaat 443
Query: 965 gtgctcttcatcgtcgagaacattaacgttgcagcgatcgagaccacgctgtggtcgatc 1024
|| |||| |||||| ||||||||||| |||||||| |||||||| || | ||||| ||
Sbjct: 444 gtcctctacatcgtggagaacattaatgttgcagcaatcgagacaactttatggtccatg 503
Query: 1025 gagtgggcggtcgctgagctggtgaaccacccggagatccagcagaag 1072
|| |||| |||| || | ||||||||||| ||||| |||||||||
Sbjct: 504 gaatggggactcgccgaaatcgtgaaccaccccgagattcagcagaag 551
>gb|BX254757.1|BX254757 BX254757 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP103H08 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 659
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| ||||||||||||||||| || || ||||| |||||||| |||||
Sbjct: 341 ggaggtcctgcacacccagggcgtggagttcgggtctcgaacccggaacgtggtgttcga 400
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||| | ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 401 tatcttcaccggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 460
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
|||||| | |||||||| ||||| |||||
Sbjct: 461 gatgcgtaggatcatgactgtgcctttctt 490
>gb|BX254922.1|BX254922 BX254922 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107E04 similar to TRANS CINNAMATE 4
MONOOXYGENASE, mRNA sequence
Length = 537
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| ||||||||||||||||| || || ||||| |||||||| |||||
Sbjct: 339 ggaggtcctgcacacccagggcgtggagttcgggtctcgaacccggaacgtggtgttcga 398
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||| | ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 399 tatcttcaccggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 458
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
|||||| | |||||||| ||||| |||||
Sbjct: 459 gatgcgtaggatcatgactgtgcctttctt 488
>gb|CF670152.1|CF670152 RTCNT1_48_A01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_48_A01_A029 5', mRNA sequence
Length = 567
Score = 123 bits (62), Expect = 2e-026
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 343 ggaggtgctccacacgcagggcgtggagttcggctcccgcacccgcaacgtggtcttcga 402
|||||| || ||||| |||||||| |||||||| || || ||||| |||||||| |||||
Sbjct: 222 ggaggtcctgcacacccagggcgtcgagttcgggtctcgaacccggaacgtggtgttcga 281
Query: 403 catcttcacggacaaggggcaggacatggtgttcaccgtgtacggcgaccactggcgcaa 462
|||||||||| ||||||||||||||||||||||||||| || || || |||||| | ||
Sbjct: 282 tatcttcacgggcaaggggcaggacatggtgttcaccgtctatggagatcactggagaaa 341
Query: 463 gatgcgccgcatcatgaccgtgcccttctt 492
||||||| | |||||| | ||||| |||||
Sbjct: 342 gatgcgcaggatcatggctgtgcctttctt 371
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 206 ttcgggaactggctgcaggtcgg 228
|||||||||||| ||||||||||
Sbjct: 85 ttcgggaactggttgcaggtcgg 107
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 203,766
Number of Sequences: 355925
Number of extensions: 203766
Number of successful extensions: 62342
Number of sequences better than 10.0: 645
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 60030
Number of HSP's gapped (non-prelim): 1780
length of query: 1794
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1774
effective length of database: 210,158,737
effective search space: 372821599438
effective search space used: 372821599438
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)