BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713013.2.1
(3807 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRN... 392 e-107
gb|DR059426.1|DR059426 RTNIT1_17_D03.g1_A029 Roots minus ni... 341 1e-091
gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mR... 311 1e-082
gb|AY789652.1| Pinus taeda cellulose synthase catalytic sub... 202 8e-050
gb|AY639654.1| Pinus radiata cellulose synthase catalytic s... 194 2e-047
gb|AY262817.1| Pinus radiata cellulose synthase (CesA6) mRN... 188 1e-045
dbj|BD236020.1| Materials and method for modification of pl... 186 5e-045
gb|DR080401.1|DR080401 RTFEPL1_22_A02.g1_A029 Roots plus ad... 180 3e-043
gb|AY789651.1| Pinus taeda cellulose synthase catalytic sub... 172 7e-041
gb|AY262818.1| Pinus radiata cellulose synthase (CesA7) mRN... 172 7e-041
gb|AY262819.1| Pinus radiata cellulose synthase (CesA8) mRN... 165 2e-038
gb|DR384721.1|DR384721 RTHG1_4_D04.b1_A029 Roots plus added... 163 7e-038
gb|BE657157.1|BE657157 NXCI_064_G04_F NXCI (Nsf Xylem Compr... 151 3e-034
gb|BE996873.1|BE996873 NXCI_103_E08_F NXCI (Nsf Xylem Compr... 147 4e-033
gb|CF672886.1|CF672886 RTCNT1_74_D05.g1_A029 Root control P... 147 4e-033
gb|DR054410.1|DR054410 RTCA1_17_D10.b1_A029 Roots minus cal... 147 4e-033
gb|DR110920.1|DR110920 RTS1_14_B08.b1_A029 Roots minus sulf... 147 4e-033
dbj|BD235989.1| Materials and method for modification of pl... 147 4e-033
gb|AY789650.1| Pinus taeda cellulose synthase catalytic sub... 147 4e-033
gb|BE187012.1|BE187012 NXNV_157_H10_F Nsf Xylem Normal wood... 143 6e-032
gb|CO169549.1|CO169549 NDL1_7_F09.g1_A029 Needles control P... 135 1e-029
dbj|BD235986.1| Materials and method for modification of pl... 135 1e-029
gb|CF668299.1|CF668299 RTCNT1_35_D11.g1_A029 Root control P... 133 6e-029
gb|CX646526.1|CX646526 COLD1_9_H07.g1_A029 Root cold Pinus ... 131 2e-028
gb|BG317558.1|BG317558 NXPV_003_B08_F NXPV (Nsf Xylem Plani... 129 9e-028
gb|BQ701215.1|BQ701215 NXSI_023_H05_F NXSI (Nsf Xylem Side ... 129 9e-028
gb|AA556746.1|AA556746 588 Loblolly pine NA Pinus taeda cDN... 127 4e-027
gb|DR118589.1|DR118589 RTMG1_18_A07.b1_A029 Roots minus mag... 121 2e-025
gb|AY262815.1| Pinus radiata cellulose synthase (CesA3) mRN... 121 2e-025
gb|BV079715.1| Pp_CesA3 Pinus pinaster megagametophytes Pin... 113 5e-023
gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulos... 111 2e-022
gb|AY764673.1|AY764673S1 Pinus taeda isolate 11 cellulose s... 111 2e-022
gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulos... 111 2e-022
gb|AY764675.1|AY764675S1 Pinus taeda isolate 16 cellulose s... 111 2e-022
gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulos... 111 2e-022
gb|AY764677.1|AY764677S1 Pinus taeda isolate 25 cellulose s... 111 2e-022
gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose... 111 2e-022
gb|AY764679.1|AY764679S1 Pinus taeda isolate 7 cellulose sy... 111 2e-022
gb|AH014294.1|SEG_AY764681S Pinus taeda isolate 6 cellulose... 111 2e-022
gb|AY764681.1|AY764681S1 Pinus taeda isolate 6 cellulose sy... 111 2e-022
gb|AH014295.1|SEG_AY764683S Pinus taeda isolate 4 cellulose... 111 2e-022
gb|AY764683.1|AY764683S1 Pinus taeda isolate 4 cellulose sy... 111 2e-022
gb|AH014296.1|SEG_AY764685S Pinus taeda isolate 26 cellulos... 111 2e-022
gb|AY764685.1|AY764685S1 Pinus taeda isolate 26 cellulose s... 111 2e-022
gb|AH014297.1|SEG_AY764687S Pinus taeda isolate 9 cellulose... 111 2e-022
gb|AY764687.1|AY764687S1 Pinus taeda isolate 9 cellulose sy... 111 2e-022
gb|AH014298.1|SEG_AY764689S Pinus taeda isolate 23 cellulos... 111 2e-022
gb|AY764689.1|AY764689S1 Pinus taeda isolate 23 cellulose s... 111 2e-022
gb|AH014299.1|SEG_AY764691S Pinus taeda isolate 13 cellulos... 111 2e-022
gb|AY764691.1|AY764691S1 Pinus taeda isolate 13 cellulose s... 111 2e-022
gb|AH014300.1|SEG_AY764693S Pinus taeda isolate 30 cellulos... 111 2e-022
gb|AY764693.1|AY764693S1 Pinus taeda isolate 30 cellulose s... 111 2e-022
gb|AH014301.1|SEG_AY764695S Pinus taeda isolate 22 cellulos... 111 2e-022
gb|AY764695.1|AY764695S1 Pinus taeda isolate 22 cellulose s... 111 2e-022
gb|AH014302.1|SEG_AY764697S Pinus taeda isolate 32 cellulos... 111 2e-022
gb|AY764697.1|AY764697S1 Pinus taeda isolate 32 cellulose s... 111 2e-022
gb|AH014303.1|SEG_AY764699S Pinus taeda isolate 18 cellulos... 111 2e-022
gb|AY764699.1|AY764699S1 Pinus taeda isolate 18 cellulose s... 111 2e-022
gb|AH014304.1|SEG_AY764701S Pinus taeda isolate 10 cellulos... 111 2e-022
gb|AY764701.1|AY764701S1 Pinus taeda isolate 10 cellulose s... 111 2e-022
gb|AH014305.1|SEG_AY764703S Pinus taeda isolate 14 cellulos... 111 2e-022
gb|AY764703.1|AY764703S1 Pinus taeda isolate 14 cellulose s... 111 2e-022
gb|AH014306.1|SEG_AY764705S Pinus taeda isolate 21 cellulos... 111 2e-022
gb|AY764705.1|AY764705S1 Pinus taeda isolate 21 cellulose s... 111 2e-022
gb|AH014307.1|SEG_AY764707S Pinus taeda isolate 31 cellulos... 111 2e-022
gb|AY764707.1|AY764707S1 Pinus taeda isolate 31 cellulose s... 111 2e-022
gb|AH014308.1|SEG_AY764709S Pinus taeda isolate 5 cellulose... 111 2e-022
gb|AY764709.1|AY764709S1 Pinus taeda isolate 5 cellulose sy... 111 2e-022
gb|AH014309.1|SEG_AY764711S Pinus taeda isolate 2 cellulose... 111 2e-022
gb|AY764711.1|AY764711S1 Pinus taeda isolate 2 cellulose sy... 111 2e-022
gb|AH014310.1|SEG_AY764713S Pinus taeda isolate 3 cellulose... 111 2e-022
gb|AY764713.1|AY764713S1 Pinus taeda isolate 3 cellulose sy... 111 2e-022
gb|AH014311.1|SEG_AY764715S Pinus taeda isolate 19 cellulos... 111 2e-022
gb|AY764715.1|AY764715S1 Pinus taeda isolate 19 cellulose s... 111 2e-022
gb|AH014312.1|SEG_AY764717S Pinus taeda isolate 28 cellulos... 111 2e-022
gb|AY764717.1|AY764717S1 Pinus taeda isolate 28 cellulose s... 111 2e-022
gb|AH014313.1|SEG_AY764719S Pinus taeda isolate 17 cellulos... 111 2e-022
gb|AY764719.1|AY764719S1 Pinus taeda isolate 17 cellulose s... 111 2e-022
gb|AH014314.1|SEG_AY764721S Pinus taeda isolate 8 cellulose... 111 2e-022
gb|AY764721.1|AY764721S1 Pinus taeda isolate 8 cellulose sy... 111 2e-022
gb|AH014315.1|SEG_AY764723S Pinus taeda isolate 15 cellulos... 111 2e-022
gb|AY764723.1|AY764723S1 Pinus taeda isolate 15 cellulose s... 111 2e-022
gb|AH014316.1|SEG_AY764725S Pinus taeda isolate 1 cellulose... 111 2e-022
gb|AY764725.1|AY764725S1 Pinus taeda isolate 1 cellulose sy... 111 2e-022
gb|AH014317.1|SEG_AY764727S Pinus taeda isolate 29 cellulos... 111 2e-022
gb|AY764727.1|AY764727S1 Pinus taeda isolate 29 cellulose s... 111 2e-022
gb|AH014318.1|SEG_AY764729S Pinus taeda isolate 20 cellulos... 111 2e-022
gb|AY764729.1|AY764729S1 Pinus taeda isolate 20 cellulose s... 111 2e-022
gb|AH014319.1|SEG_AY764731S Pinus taeda isolate 27 cellulos... 111 2e-022
gb|AY764731.1|AY764731S1 Pinus taeda isolate 27 cellulose s... 111 2e-022
gb|AH014320.1|SEG_AY764733S Pinus taeda isolate 12 cellulos... 111 2e-022
gb|AY764733.1|AY764733S1 Pinus taeda isolate 12 cellulose s... 111 2e-022
gb|AH014321.1|SEG_AY764735S Pinus taeda isolate 24 cellulos... 111 2e-022
gb|AY764735.1|AY764735S1 Pinus taeda isolate 24 cellulose s... 111 2e-022
gb|AA556640.1|AA556640 495 Loblolly pine C Pinus taeda cDNA... 109 9e-022
gb|BF778216.1|BF778216 NXSI_083_G10_F NXSI (Nsf Xylem Side ... 105 1e-020
gb|BI202889.1|BI202889 NXPV_091_H09_F NXPV (Nsf Xylem Plani... 105 1e-020
gb|CO201610.1|CO201610 RTCNT2_7_A01.b1_A029 Root control 2 ... 105 1e-020
gb|CO369942.1|CO369942 RTK1_55_A04.g1_A029 Roots minus pota... 105 1e-020
gb|AW697996.1|AW697996 NXNV_079_C07_F Nsf Xylem Normal wood... 98 3e-018
gb|BG039685.1|BG039685 NXSI_102_H08_F NXSI (Nsf Xylem Side ... 98 3e-018
gb|BQ695648.1|BQ695648 NXPV_030_H04_F NXPV (Nsf Xylem Plani... 98 3e-018
gb|BQ697774.1|BQ697774 NXPV_052_F10_F NXPV (Nsf Xylem Plani... 98 3e-018
gb|BQ703105.1|BQ703105 NXSI_136_D09_F NXSI (Nsf Xylem Side ... 98 3e-018
gb|DR060720.1|DR060720 RTNIT1_29_C08.g1_A029 Roots minus ni... 98 3e-018
gb|DR686101.1|DR686101 EST1076179 Normalized pine embryo li... 98 3e-018
gb|AY764674.1|AY764673S2 Pinus taeda isolate 11 cellulose s... 98 3e-018
gb|AY764676.1|AY764675S2 Pinus taeda isolate 16 cellulose s... 98 3e-018
gb|AY764678.1|AY764677S2 Pinus taeda isolate 25 cellulose s... 98 3e-018
gb|AY764680.1|AY764679S2 Pinus taeda isolate 7 cellulose sy... 98 3e-018
gb|AY764682.1|AY764681S2 Pinus taeda isolate 6 cellulose sy... 98 3e-018
gb|AY764684.1|AY764683S2 Pinus taeda isolate 4 cellulose sy... 98 3e-018
gb|AY764686.1|AY764685S2 Pinus taeda isolate 26 cellulose s... 98 3e-018
gb|AY764688.1|AY764687S2 Pinus taeda isolate 9 cellulose sy... 98 3e-018
gb|AY764690.1|AY764689S2 Pinus taeda isolate 23 cellulose s... 98 3e-018
gb|AY764692.1|AY764691S2 Pinus taeda isolate 13 cellulose s... 98 3e-018
gb|AY764694.1|AY764693S2 Pinus taeda isolate 30 cellulose s... 98 3e-018
gb|AY764696.1|AY764695S2 Pinus taeda isolate 22 cellulose s... 98 3e-018
gb|AY764698.1|AY764697S2 Pinus taeda isolate 32 cellulose s... 98 3e-018
gb|AY764700.1|AY764699S2 Pinus taeda isolate 18 cellulose s... 98 3e-018
gb|AY764702.1|AY764701S2 Pinus taeda isolate 10 cellulose s... 98 3e-018
gb|AY764704.1|AY764703S2 Pinus taeda isolate 14 cellulose s... 98 3e-018
gb|AY764706.1|AY764705S2 Pinus taeda isolate 21 cellulose s... 98 3e-018
gb|AY764708.1|AY764707S2 Pinus taeda isolate 31 cellulose s... 98 3e-018
gb|AY764710.1|AY764709S2 Pinus taeda isolate 5 cellulose sy... 98 3e-018
gb|AY764712.1|AY764711S2 Pinus taeda isolate 2 cellulose sy... 98 3e-018
gb|AY764714.1|AY764713S2 Pinus taeda isolate 3 cellulose sy... 98 3e-018
gb|AY764716.1|AY764715S2 Pinus taeda isolate 19 cellulose s... 98 3e-018
gb|AY764718.1|AY764717S2 Pinus taeda isolate 28 cellulose s... 98 3e-018
gb|AY764720.1|AY764719S2 Pinus taeda isolate 17 cellulose s... 98 3e-018
gb|AY764722.1|AY764721S2 Pinus taeda isolate 8 cellulose sy... 98 3e-018
gb|AY764724.1|AY764723S2 Pinus taeda isolate 15 cellulose s... 98 3e-018
gb|AY764726.1|AY764725S2 Pinus taeda isolate 1 cellulose sy... 98 3e-018
gb|AY764728.1|AY764727S2 Pinus taeda isolate 29 cellulose s... 98 3e-018
gb|AY764734.1|AY764733S2 Pinus taeda isolate 12 cellulose s... 98 3e-018
gb|AY764736.1|AY764735S2 Pinus taeda isolate 24 cellulose s... 98 3e-018
gb|BX250234.1|BX250234 BX250234 Pinus pinaster differenciat... 96 1e-017
gb|AA556522.1|AA556522 377 Loblolly pine C Pinus taeda cDNA... 94 5e-017
gb|BQ196805.1|BQ196805 NXLV105_E07_F NXLV (Nsf Xylem Late w... 90 8e-016
gb|AY764730.1|AY764729S2 Pinus taeda isolate 20 cellulose s... 90 8e-016
gb|AY764732.1|AY764731S2 Pinus taeda isolate 27 cellulose s... 90 8e-016
gb|AW984889.1|AW984889 NXNV_100_C02_F Nsf Xylem Normal wood... 86 1e-014
gb|BX682714.1|BX682714 BX682714 Pinus pinaster differenciat... 86 1e-014
gb|DR744890.1|DR744890 RTCU1_25_C12.g1_A029 Roots plus adde... 86 1e-014
gb|AY262816.1| Pinus radiata cellulose synthase (CesA5) mRN... 86 1e-014
gb|BX000643.1|BX000643 BX000643 Pinus pinaster xylem Pinus ... 84 5e-014
gb|CD016846.1|CD016846 NXCI_064_H04_F NXCI (Nsf Xylem Compr... 84 5e-014
gb|BX249248.1|BX249248 BX249248 Pinus pinaster differenciat... 82 2e-013
gb|AW010875.1|AW010875 ST12E01 Pine TriplEx shoot tip libra... 80 8e-013
gb|CD022890.1|CD022890 NXPV_089_B01_F NXPV (Nsf Xylem Plani... 80 8e-013
gb|CD022200.1|CD022200 NXPV_024_F02_F NXPV (Nsf Xylem Plani... 76 1e-011
gb|CD017587.1|CD017587 NXCI_129_A12_F NXCI (Nsf Xylem Compr... 74 5e-011
gb|AW985306.1|AW985306 NXNV_135_F04_F Nsf Xylem Normal wood... 70 7e-010
gb|BE996842.1|BE996842 NXCI_103_B03_F NXCI (Nsf Xylem Compr... 70 7e-010
gb|AW985238.1|AW985238 NXNV_132_G11_F Nsf Xylem Normal wood... 66 1e-008
gb|BQ291066.1|BQ291066 NXRV055_C03_F NXRV (Nsf Xylem Root w... 66 1e-008
gb|BQ695964.1|BQ695964 NXPV_034_H04_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BQ698119.1|BQ698119 NXPV_064_G05_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BQ698366.1|BQ698366 NXPV_069_A10_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|CD023046.1|CD023046 NXPV_098_A07_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BF169757.1|BF169757 NXCI_128_G07_F NXCI (Nsf Xylem Compr... 60 7e-007
gb|CD020015.1|CD020015 NXNV017A03 Nsf Xylem Normal wood Ver... 58 3e-006
gb|AI812887.1|AI812887 22B3 Pine Lambda Zap Xylem library P... 56 1e-005
gb|AW698053.1|AW698053 NXNV_072_F12_F Nsf Xylem Normal wood... 56 1e-005
gb|BE209203.1|BE209203 NXNV_147_C08_F Nsf Xylem Normal wood... 56 1e-005
gb|BF610475.1|BF610475 NXSI_058_H08_F NXSI (Nsf Xylem Side ... 56 1e-005
gb|BG039408.1|BG039408 NXSI_098_F10_F NXSI (Nsf Xylem Side ... 56 1e-005
gb|BQ702475.1|BQ702475 NXSI_129_A10_F NXSI (Nsf Xylem Side ... 56 1e-005
gb|BQ702504.1|BQ702504 NXSI_129_D04_F NXSI (Nsf Xylem Side ... 56 1e-005
gb|CD021726.1|CD021726 NXNV_159_F12_F Nsf Xylem Normal wood... 56 1e-005
gb|CF666027.1|CF666027 RTCNT1_20_E07.b1_A029 Root control P... 56 1e-005
gb|CF666095.1|CF666095 RTCNT1_20_E07.g1_A029 Root control P... 56 1e-005
gb|CF672816.1|CF672816 RTCNT1_74_D05.b1_A029 Root control P... 56 1e-005
gb|CO168623.1|CO168623 NDL1_1_A02.g1_A029 Needles control P... 56 1e-005
gb|BX252761.1|BX252761 BX252761 Pinus pinaster differenciat... 54 4e-005
gb|BX254358.1|BX254358 BX254358 Pinus pinaster differenciat... 54 4e-005
gb|BE451860.1|BE451860 NXCI_004_B09_F NXCI (Nsf Xylem Compr... 54 4e-005
gb|BE643725.1|BE643725 NXCI_043_H03_F NXCI (Nsf Xylem Compr... 54 4e-005
gb|CF476470.1|CF476470 RTWW3_1_C10.g1_A022 Well-watered lob... 54 4e-005
gb|CF668221.1|CF668221 RTCNT1_35_D11.b1_A029 Root control P... 54 4e-005
gb|CO369260.1|CO369260 RTK1_46_B01.b1_A029 Roots minus pota... 54 4e-005
gb|DR110657.1|DR110657 RTS1_12_E03.b1_A029 Roots minus sulf... 54 4e-005
gb|DR110744.1|DR110744 RTS1_12_E03.g1_A029 Roots minus sulf... 54 4e-005
gb|AY262814.1| Pinus radiata cellulose synthase (CesA11) mR... 54 4e-005
gb|BE656835.1|BE656835 NXCI_040_B06_F NXCI (Nsf Xylem Compr... 52 2e-004
gb|BF010934.1|BF010934 NXCI_094_H06_F NXCI (Nsf Xylem Compr... 52 2e-004
gb|BF609760.1|BF609760 NXSI_050_B03_F NXSI (Nsf Xylem Side ... 52 2e-004
gb|BG275715.1|BG275715 NXSI_145_B01_F NXSI (Nsf Xylem Side ... 52 2e-004
gb|CD017522.1|CD017522 NXCI_124_B01_F NXCI (Nsf Xylem Compr... 52 2e-004
gb|AL750979.1|AL750979 AL750979 RS Pinus pinaster cDNA clon... 50 7e-004
gb|BE520100.1|BE520100 NXCI_016_G11_F NXCI (Nsf Xylem Compr... 50 7e-004
gb|DN609460.1|DN609460 EST962510 Subtracted pine embryo lib... 50 7e-004
gb|DR017506.1|DR017506 STRS1_16_E10.g1_A034 Shoot tip pitch... 50 7e-004
gb|DR162195.1|DR162195 RTFE1_16_G12.b1_A029 Roots minus iro... 50 7e-004
gb|DT627755.1|DT627755 EST1156504 Subtracted pine embryo li... 50 7e-004
gb|BV102456.1| AY531556.SNP1 Pinus pinaster megagametophyte... 50 7e-004
gb|BV102457.1| AY531556.SNP2 Pinus pinaster megagametophyte... 50 7e-004
gb|AY531556.1| Pinus pinaster putative cellulose synthase g... 50 7e-004
gb|BX249614.1|BX249614 BX249614 Pinus pinaster differenciat... 48 0.003
gb|BX254022.1|BX254022 BX254022 Pinus pinaster differenciat... 48 0.003
gb|BX254483.1|BX254483 BX254483 Pinus pinaster differenciat... 48 0.003
gb|BX254948.1|BX254948 BX254948 Pinus pinaster differenciat... 48 0.003
gb|BX255349.1|BX255349 BX255349 Pinus pinaster differenciat... 48 0.003
gb|BF609149.1|BF609149 NXSI_040_H08_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BF609349.1|BF609349 NXSI_045_C06_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BF609565.1|BF609565 NXSI_046_C11_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BF777175.1|BF777175 NXSI_066_C05_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BF777661.1|BF777661 NXSI_073_C10_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BF778225.1|BF778225 NXSI_083_H07_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BG040499.1|BG040499 NXSI_108_H05_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BG275218.1|BG275218 NXSI_138_C06_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BG832808.1|BG832808 NXPV_080_C10_F NXPV (Nsf Xylem Plani... 48 0.003
gb|BQ701506.1|BQ701506 NXSI_065_D05_F NXSI (Nsf Xylem Side ... 48 0.003
gb|CF396363.1|CF396363 RTDS2_21_F06.g1_A021 Drought-stresse... 48 0.003
gb|CO369344.1|CO369344 RTK1_46_B01.g1_A029 Roots minus pota... 48 0.003
gb|AW011234.1|AW011234 ST18D02 Pine TriplEx shoot tip libra... 46 0.011
gb|BX250396.1|BX250396 BX250396 Pinus pinaster differenciat... 46 0.011
gb|BX255542.1|BX255542 BX255542 Pinus pinaster differenciat... 46 0.011
gb|BM428045.1|BM428045 NXRV_008_A09_F NXRV (Nsf Xylem Root ... 46 0.011
gb|AW289623.1|AW289623 NXNV003H02F Nsf Xylem Normal wood Ve... 44 0.042
gb|BF169694.1|BF169694 NXCI_126_F04_F NXCI (Nsf Xylem Compr... 44 0.042
gb|BF220717.1|BF220717 NXCI_149_G02_F NXCI (Nsf Xylem Compr... 44 0.042
gb|BF610612.1|BF610612 NXSI_060_G02_F NXSI (Nsf Xylem Side ... 44 0.042
gb|BG275945.1|BG275945 NXSI_149_G12_F NXSI (Nsf Xylem Side ... 44 0.042
gb|CD028231.1|CD028231 NXNV003H02 Nsf Xylem Normal wood Ver... 44 0.042
gb|DR020730.1|DR020730 STRS1_38_H10.g1_A034 Shoot tip pitch... 44 0.042
gb|BF221043.1|BF221043 NXCI_162_E11_F NXCI (Nsf Xylem Compr... 42 0.17
gb|BF610213.1|BF610213 NXSI_056_B10_F NXSI (Nsf Xylem Side ... 42 0.17
gb|BG673833.1|BG673833 NXPV_075_F11_F NXPV (Nsf Xylem Plani... 42 0.17
gb|CD026006.1|CD026006 NXSI_094_B11_F NXSI (Nsf Xylem Side ... 42 0.17
gb|CF390276.1|CF390276 RTDR2_18_A03.g1_A021 Loblolly pine r... 42 0.17
gb|BX682482.1|BX682482 BX682482 Pinus pinaster differenciat... 42 0.17
gb|BX682490.1|BX682490 BX682490 Pinus pinaster differenciat... 42 0.17
>gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRNA, partial cds
Length = 3603
Score = 392 bits (198), Expect = e-107
Identities = 728/905 (80%)
Strand = Plus / Minus
Query: 1669 ttggcatatcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcag 1728
|||||||| ||||||||||| ||||| ||||| || || || |||||||| ||||| ||
Sbjct: 1778 ttggcataccgatcattcctatcaataccatcaaacctttgaggaaactggacgtaacaa 1719
Query: 1729 acactccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactg 1788
||| | | || || ||||| ||||| | || ||||| || || | || ||||||||
Sbjct: 1718 acagacttcccaagattaggatccatcataaaacacatggcctcacgcagcgccttacta 1659
Query: 1789 ttgttaatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagct 1848
|| || || |||||||||||||| || ||||||| || |||||| || || || |||
Sbjct: 1658 ttatttatatagtgatcacaatcgaggttcaacagataagatccatttgtgagtactgct 1599
Query: 1849 gagacacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgc 1908
|| ||||| || | | |||||| ||||| ||||||||||| || ||||| ||||| | |
Sbjct: 1598 gaaacacggaccaatgaattcatagcaccggctttcttgtggtgttggaagccaggcctc 1539
Query: 1909 ttttcacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccacca 1968
||||||||||| |||||||| | ||| ||||| |||||||| |||||||| | || |||
Sbjct: 1538 ttttcacgagacacatagactagacgtggtagttcattgccttcagtatccatccctcca 1479
Query: 1969 ctgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccat 2028
||||| || | || ||||| ||||| ||||||||||||| |||||| ||||| |||||
Sbjct: 1478 ctgtgtcctaaaaacacctgtatcatcccaggatggtccctggtattatttccaggccag 1419
Query: 2029 ggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaagg 2088
|| |||||||||||||| | ||| || || ||||| || ||||| ||||| ||||||||
Sbjct: 1418 ggagtgccatcttgcataacccagccctcttcaggtaccttctgggccttcgcaacaagc 1359
Query: 2089 ccatttaccctaactttgaattcttcatattctctcttcatggcccggcggtctttaaca 2148
|||| | || ||| |||||||||||||||||||||||||| |||| || ||||| |||
Sbjct: 1358 gcattgatccgaaccttgaattcttcatattctctcttcattgccctccgctcttttaca 1299
Query: 2149 aatgaagggtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcagga 2208
|| | ||| || |||||||||||||||||||| |||||| | ||||||||||| || |||
Sbjct: 1298 aaagtaggctgtactttgtccttcaagtaatccattttcagtgagaagtaccactctgga 1239
Query: 2209 gctctaggttcaatgttgtacttcttaacaaatggtacccattttctagcaaactctgaa 2268
||||| ||||||||||| |||| || |||||| |||||||| || ||||| ||||||
Sbjct: 1238 gctctgggttcaatgttaaactttttgcaaaatggcacccatttccttgcaaattctgaa 1179
Query: 2269 gtctcagctagtgcatcaaatgtcagcatcgcagctccatcatcagatacatagcaagag 2328
|| || | || | || || |||| ||| || |||||||| ||||| |||||||| ||
Sbjct: 1178 gtttctgaaagggattcgaaagtcaacatggctgctccatcgtcagaaacatagcaggaa 1119
Query: 2329 accttatccacagggtaatccacagcaagaatggatagcacggtattggcagtgacaaga 2388
||||| || ||||| |||||||||| ||||| || || || || || ||||| ||||||
Sbjct: 1118 accttgtcaacaggataatccacagacagaatcgacagaacagtgtttgcagtaacaaga 1059
Query: 2389 ggaggctccttcattgggtcgactgtactgacgaaaatgtcaacagcagccaactgagat 2448
||||||||||| | ||||| ||||||||||| |||||||||| |||||||||||| |||
Sbjct: 1058 ggaggctcctttaaagggtcaactgtactgacaaaaatgtcaatagcagccaactgtgat 999
Query: 2449 ggctcaccttcccggtcataccttaatgccagcctatcaaggtacgtctcccggttgatt 2508
|| |||||||| |||||||| || || || ||||| |||||||| || |||| |||||
Sbjct: 998 ggttcaccttctcggtcatatctcaaagcaagcctgtcaaggtatgtttccctattgatg 939
Query: 2509 ggaaaccacttagggaactgatccaatatccacgaaagagcaaaccagatctcacatata 2568
|| | ||| || || |||||||||| ||||| |||| |||||||| | |||||||||
Sbjct: 938 ggtagccatttcggaaactgatccaggatccatgaaatggcaaaccaaacctcacatatc 879
Query: 2569 acaga 2573
|||||
Sbjct: 878 acaga 874
Score = 91.7 bits (46), Expect = 2e-016
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
||||||| ||| || |||||||| || || |||||||| ||||| || || || |||
Sbjct: 2411 tggttcaaacgatcagaaagatttataggagcagaccctttgaatgcagggcgaggaggc 2352
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || | |||||| || || ||||| || ||||| || | ||| |||||
Sbjct: 2351 atgcagtaaatggatctccagccacgagcatgcattttaaatccagttaaaatatcttcc 2292
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||| ||||| || ||||| || |||||| |||||| || |||||||| ||||| |||
Sbjct: 2291 gtcactgaaccataaatccaaccaatctcacgtccccagtctgtcttgtcttcataccca 2232
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| ||||||||||||||||||||
Sbjct: 2231 cagctaataacatggatagcttcttt 2206
Score = 69.9 bits (35), Expect = 7e-010
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 1273 gactgaggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggcca 1332
|||||| ||||||| |||| |||||| || ||||| |||||||| | | || || |||
Sbjct: 2183 gactgatgaacaccgccattctccatgagggtggatgcaacaaatacagatgattgacca 2124
Query: 1333 aatctcttctccaggctcatttgagacataagaagtgatttctcgtcgtcaaatccagcg 1392
||||| ||||| | |||| | |||||||| || || |||||||| || |||||||| ||
Sbjct: 2123 aatcttttctctaagctcttctgagacatgagcagagatttctcatcatcaaatcctgca 2064
Query: 1393 ccttcaactccctcctctatatcttcaaggttgaa 1427
|||||||| || || ||||||||||| || |||||
Sbjct: 2063 ccttcaacgccttcttctatatcttccagattgaa 2029
>gb|DR059426.1|DR059426 RTNIT1_17_D03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_17_D03_A029 5', mRNA sequence
Length = 862
Score = 341 bits (172), Expect = 1e-091
Identities = 495/603 (82%)
Strand = Plus / Minus
Query: 1866 attcatggcaccagctttcttgtgatgctggaatccaggacgcttttcacgagaaacata 1925
|||||| ||||| ||||||||||| || ||||| ||||| | |||||||||||| |||||
Sbjct: 647 attcatagcaccggctttcttgtggtgttggaagccaggcctcttttcacgagacacata 588
Query: 1926 gaccaaacggggtagctcattgccctcagtatcaaggccaccactgtgaccaaggaaaac 1985
||| | ||| ||||| |||||||| |||||||| | || |||||||| || | || ||
Sbjct: 587 gactagacgtggtagttcattgccttcagtatccatccctccactgtgtcctaaaaacac 528
Query: 1986 ctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgcat 2045
||| ||||| ||||||||||||| |||||| ||||| ||||| | ||||||||||||||
Sbjct: 527 ctgtatcatcccaggatggtccctggtattatttccaggccagagagtgccatcttgcat 468
Query: 2046 gatccatccttcctcaggaactttctgtgccttagcaacaaggccatttaccctaacttt 2105
| ||| || || ||||| || ||||| ||||| |||||||| |||| | || ||| ||
Sbjct: 467 aacccagccctcttcaggtaccttctgggccttcgcaacaagcgcattgatccgaacctt 408
Query: 2106 gaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcacttt 2165
|||||||||||||||||||||||| |||| || ||||| ||||| | ||| || |||||
Sbjct: 407 gaattcttcatattctctcttcattgccctccgctcttttacaaaagtaggctgtacttt 348
Query: 2166 gtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatgtt 2225
||||||||||||||| |||||| | || |||||||| || |||||||| |||||||||||
Sbjct: 347 gtccttcaagtaatccattttcagtgaaaagtaccactctggagctctgggttcaatgtt 288
Query: 2226 gtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgcatc 2285
|||| || |||||| |||||||| || ||||| |||||||| || | || | ||
Sbjct: 287 aaactttttgcaaaatggcacccatttccttgcaaattctgaagtttctgaaagggattc 228
Query: 2286 aaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacagggta 2345
|| |||| ||| || |||||||| ||||| |||||||| || ||||| || ||||| ||
Sbjct: 227 gaaagtcaacatggctgctccatcgtcagaaacatagcaggaaaccttgtcaacaggata 168
Query: 2346 atccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcattgg 2405
|||||||| ||||| || || || || || ||||| ||||||||||||||||| | ||
Sbjct: 167 atccacagacagaatcgacagaacagtgtttgcagtaacaagaggaggctcctttaaagg 108
Query: 2406 gtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccggtc 2465
||| ||||||||||| |||||||||| |||||||||||| ||||| |||||||| |||||
Sbjct: 107 gtcaactgtactgacaaaaatgtcaatagcagccaactgtgatggttcaccttctcggtc 48
Query: 2466 ata 2468
|||
Sbjct: 47 ata 45
>gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mRNA, complete cds
Length = 4428
Score = 311 bits (157), Expect = 1e-082
Identities = 630/788 (79%)
Strand = Plus / Minus
Query: 1672 gcatatcgatcattcctgtcaatgccatcgaatctctggggaaactgaacgtagcagaca 1731
|||||||||||||| |||||||||||||| || || || || |||||||| || |||||
Sbjct: 2528 gcatatcgatcatttctgtcaatgccatcaaacctttgagggaactgaacataacagact 2469
Query: 1732 ctccttcctaggttagggtccataaggaagcacatagcttccctgagagccttactgttg 1791
|| | || || |||| ||||| | || ||||| || || | || ||| | ||||||
Sbjct: 2468 ttcttcccaagagtaggatccatcataaaacacatggcctcacgaagggccctgctgttg 2409
Query: 1792 ttaatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgag 1851
|| || || || |||||||||||||| | ||| || | ||||||||||| || || ||
Sbjct: 2408 tttatataatggtcacaatcaagattgagcatataagggccattggtaagaactgcggaa 2349
Query: 1852 acacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgcttt 1911
|||||||| | | |||||| ||||||||||| ||||| || | || ||||| | ||||
Sbjct: 2348 acacgaaccaatgaattcattgcaccagcttttttgtggtgttcaaaaccaggtctcttt 2289
Query: 1912 tcacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggccaccactg 1971
|||||||||||||| || | || ||||| |||||||| || || ||||| ||||||||
Sbjct: 2288 tcacgagaaacatatacaagtcgaggtagttcattgccatcggtgtcaagcccaccacta 2229
Query: 1972 tgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctggccatggt 2031
||||| | ||| ||||| ||||| ||||||||||||| |||||| ||||| ||||| |||
Sbjct: 2228 tgacctaagaacacctgtatcatcccaggatggtcccgggtattatttccaggccaaggt 2169
Query: 2032 gtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaacaaggcca 2091
|| ||||||||||| ||||| ||||| |||||||| ||||| || ||||||||||| ||
Sbjct: 2168 gttccatcttgcataatccagccttcttcaggaaccttctgagctttagcaacaagagca 2109
Query: 2092 tttaccctaactttgaattcttcatattctctcttcatggcccggcggtctttaacaaat 2151
|| | | || ||||| |||||||||||||||||||| || | || ||||| |||||
Sbjct: 2108 ttgattcggaccttgaactcttcatattctctcttcattgctctacgttcttttacaaaa 2049
Query: 2152 gaagggtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagct 2211
||||| |||||||| ||||||| || || || || || | || ||||| || |||||
Sbjct: 2048 gaaggttgcactttatccttcagatagtctatcttttgagcaaaataccactctggagcc 1989
Query: 2212 ctaggttcaatgttgtacttcttaacaaatggtacccattttctagcaaactctgaagtc 2271
|| |||||||| | | || ||||||||||| |||||||| || ||||| ||||| ||
Sbjct: 1988 ctgggttcaatatcaaattttttaacaaatggcacccatttccttgcaaattctgaggtt 1929
Query: 2272 tcagctagtgcatcaaatgtcagcatcgcagctccatcatcagatacatagcaagagacc 2331
|||| || || |||||||| ||||| ||||||||||| ||||| ||||| || || ||
Sbjct: 1928 tcagaaagggcttcaaatgttagcattgcagctccatcgtcagacacataacatgaaact 1869
Query: 2332 ttatccacagggtaatccacagcaagaatggatagcacggtattggcagtgacaagagga 2391
||||| || || || ||||||| |||||| || | || ||||| || || |||||||||
Sbjct: 1868 ttatcaactggatagtccacagaaagaattgacaaaacagtatttgccgtcacaagagga 1809
Query: 2392 ggctccttcattgggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggc 2451
||||||||||| || || ||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1808 ggctccttcataggatcaactgtgctgacaaaaatatcaacagcagccaactgagatggc 1749
Query: 2452 tcaccttc 2459
|| |||||
Sbjct: 1748 tctccttc 1741
Score = 75.8 bits (38), Expect = 1e-011
Identities = 164/206 (79%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
||||||||||| || |||||||| || || ||||| |||||||| || || || |||
Sbjct: 3149 tggttcagacgatcagaaagattaattggagcagatcccttgaatgcagggcgaggaggc 3090
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|| ||||| || || ||||| || || || ||||| || || || || | ||| ||||||
Sbjct: 3089 atacagtatattgatcgccaaccacgagcatgcattttaaagccagtcaaaatatcttct 3030
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| || ||||| || ||||| ||||||| || | |||||| ||||| |||
Sbjct: 3029 gtcacagaaccatatatccaaccaatctcttttccccaatctgacttgtcttcataacca 2970
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || |||||||| ||||||||
Sbjct: 2969 cagctgattacatggattgcttcttt 2944
Score = 67.9 bits (34), Expect = 3e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 712 atcacccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatc 771
||||||||||||||||| ||||||||||| || || ||||| ||||||||||| | |||
Sbjct: 3482 atcacccagaactgctcattcctccaccattcatcaatgccaaccccgctccatcgcatt 3423
Query: 772 tccaggatgcccgt 785
|| || ||||||||
Sbjct: 3422 tctagtatgcccgt 3409
>gb|AY789652.1| Pinus taeda cellulose synthase catalytic subunit (CesA3) mRNA,
complete cds
Length = 3959
Score = 202 bits (102), Expect = 8e-050
Identities = 251/301 (83%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1924 aagcacatggcttccctgattgccttgctgttgttaatgtagtgatcacaatccagattc 1865
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
| ||| || | ||||||| |||||||| || || ||||| | |||||||||||||||
Sbjct: 1864 agcataaatggagcattggtgagcacagcagaaacccgaaccaaagcattcatggcaccg 1805
Query: 1879 gctttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggt 1938
|| ||||||||||||||||| ||||| | ||| |||||||||||||| || | || ||
Sbjct: 1804 gccttcttgtgatgctggaaaccaggtctcttctcacgagaaacatatactagccgagga 1745
Query: 1939 agctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattcca 1998
||||||||||| || ||||| ||||| ||||||||||| | ||| || || ||||| |||
Sbjct: 1744 agctcattgccttctgtatcgaggccgccactgtgacccaagaacacttggatcatacca 1685
Query: 1999 ggatggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcc 2058
|||||||| | |||||| || || ||||| || || || |||||||| |||||||||||
Sbjct: 1684 ggatggtcacgggtattattaccaggccaaggcgtaccgtcttgcattgtccatccttcc 1625
Query: 2059 t 2059
|
Sbjct: 1624 t 1624
Score = 135 bits (68), Expect = 1e-029
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 2630 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 2571
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 2570 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 2511
Query: 1161 ttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcata 1220
||||| || || || |||||||| || | ||| |||||||||| || ||||| |||||
Sbjct: 2510 ctctgtgactgatccatagatccatccaagctcttttccccattccgttttgtcttcata 2451
Query: 1221 gccacagcttataacatggatagc 1244
|||||||| || ||||| |||||
Sbjct: 2450 tccacagctgatgacatgaatagc 2427
Score = 129 bits (65), Expect = 9e-028
Identities = 362/461 (78%)
Strand = Plus / Minus
Query: 2104 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2163
||||||||||||||||||||||||||||||||||| ||||| ||||| | || || | |
Sbjct: 1579 ttgaattcttcatattctctcttcatggcccggcgctctttgacaaaggtgggttgaaat 1520
Query: 2164 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2223
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1519 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1460
Query: 2224 ttgtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgca 2283
| | | ||||| ||||||||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1459 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1400
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||| || ||||||| ||||| |||||||| ||||| || || || || || ||||||
Sbjct: 1399 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1340
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|| || || | ||| || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1339 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1280
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2463
|| || || ||||| || || | |||||||| || | | ||||| || ||||| ||
Sbjct: 1279 ggatccacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1220
Query: 2464 tcataccttaatgccagcctatcaaggtacgtctcccggttgattggaaaccacttaggg 2523
|| |||||||||| ||| | |||||| ||||| || || |||| || |||||||| ||
Sbjct: 1219 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1160
Query: 2524 aactgatccaatatccacgaaagagcaaaccagatctcaca 2564
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1159 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1119
Score = 89.7 bits (45), Expect = 8e-016
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 3298 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 3239
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| || |||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 3238 acaataacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3186
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1279 ggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatctc 1338
||||||||||||| ||||||||||||||| |||||| |||| ||||||||||| ||
Sbjct: 2392 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2333
Query: 1339 ttctc 1343
|||||
Sbjct: 2332 ttctc 2328
Score = 42.1 bits (21), Expect = 0.17
Identities = 72/89 (80%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || || | |||||| || || |||| ||| || ||||||||||| |||
Sbjct: 2956 acccagaactgttcatttcgccaccattcttcaatgctcactccactccacctcatttcc 2897
Query: 775 aggatgcccgtggcgaagatcgagatgaa 803
|| || || ||||| || || ||||||||
Sbjct: 2896 agaataccagtggcaaaaattgagatgaa 2868
>gb|AY639654.1| Pinus radiata cellulose synthase catalytic subunit (CesA1) mRNA,
complete cds
Length = 3911
Score = 194 bits (98), Expect = 2e-047
Identities = 250/301 (83%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1934 aagcacatgccttccctgattgccttgctgttgttaatgtagtgatcacaatccagattc 1875
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
| ||| || | ||||||| |||||||| || || ||||| | |||||||||||||||
Sbjct: 1874 agcataaatggagcattggtgagcacagcagaaacccgaaccaaagcattcatggcaccg 1815
Query: 1879 gctttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggt 1938
|| ||||||||||||||||| ||||| | ||| |||||||||||||| || | || ||
Sbjct: 1814 gccttcttgtgatgctggaaaccaggtctcttctcacgagaaacatatactagccgagga 1755
Query: 1939 agctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattcca 1998
||||||||||| || ||||| ||||| ||||||||||| | ||| || || ||||| |||
Sbjct: 1754 agctcattgccttctgtatcgaggccgccactgtgacccaagaacacttggatcatacca 1695
Query: 1999 ggatggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcc 2058
|||||||| | |||||| || || ||||| || || || |||||||| |||||||||||
Sbjct: 1694 ggatggtcacgggtattattaccaggccaaggcgtaccgtcttgcattgtccatccttcc 1635
Query: 2059 t 2059
|
Sbjct: 1634 t 1634
Score = 135 bits (68), Expect = 1e-029
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 2640 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 2581
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 2580 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 2521
Query: 1161 ttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcata 1220
||||| || || || |||||||| || | ||| |||||||||| || ||||| |||||
Sbjct: 2520 ctctgtgactgatccatagatccatccaagctcttttccccattccgttttgtcttcata 2461
Query: 1221 gccacagcttataacatggatagc 1244
|||||||| || ||||| |||||
Sbjct: 2460 tccacagctgatgacatgaatagc 2437
Score = 129 bits (65), Expect = 9e-028
Identities = 362/461 (78%)
Strand = Plus / Minus
Query: 2104 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2163
||||||||||||||||||||||||||||||||||| ||||| ||||| | || || | |
Sbjct: 1589 ttgaattcttcatattctctcttcatggcccggcgctctttgacaaaggtgggttgaaat 1530
Query: 2164 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2223
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1529 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1470
Query: 2224 ttgtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgca 2283
| | | ||||| ||||||||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1469 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1410
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||| || ||||||| ||||| |||||||| ||||| || || || || || ||||||
Sbjct: 1409 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1350
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|| || || | ||| || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1349 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1290
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2463
|| || || ||||| || || | |||||||| || | | ||||| || ||||| ||
Sbjct: 1289 ggatctacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1230
Query: 2464 tcataccttaatgccagcctatcaaggtacgtctcccggttgattggaaaccacttaggg 2523
|| |||||||||| ||| | |||||| ||||| || || |||| || |||||||| ||
Sbjct: 1229 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1170
Query: 2524 aactgatccaatatccacgaaagagcaaaccagatctcaca 2564
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1169 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1129
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 3308 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 3249
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 3248 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3196
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1279 ggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatctc 1338
||||||||||||| ||||||||||||||| |||||| |||| ||||||||||| ||
Sbjct: 2402 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2343
Query: 1339 ttctc 1343
|||||
Sbjct: 2342 ttctc 2338
Score = 42.1 bits (21), Expect = 0.17
Identities = 72/89 (80%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || || | |||||| || || |||| ||| || ||||||||||| |||
Sbjct: 2966 acccagaactgttcatttcgccaccattcttcaatgctcactccactccacctcatttcc 2907
Query: 775 aggatgcccgtggcgaagatcgagatgaa 803
|| || || ||||| || || ||||||||
Sbjct: 2906 agaataccagtggcaaaaattgagatgaa 2878
>gb|AY262817.1| Pinus radiata cellulose synthase (CesA6) mRNA, partial cds
Length = 2489
Score = 188 bits (95), Expect = 1e-045
Identities = 487/618 (78%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 733 gttgaaaacgcatccagtccccacatacactggcccctggatgccatctagacccttcat 674
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 673 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 614
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 613 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 554
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 553 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 494
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| || | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 493 aatgaatggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 434
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtag 1940
||||||||| ||||| ||||||| | ||||||||||||||||||||| | || || ||
Sbjct: 433 tttcttgtggtgctgatatccaggtctcttttcacgagaaacatagacaaggcgaggaag 374
Query: 1941 ctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
||| || |||||| ||||| || | |||||| || || || |||||||||||||||||
Sbjct: 373 ctcgttcccctcaatatcatgggctccactgcttcccagaaacacctgaatcattccagg 314
Query: 2001 atggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctc 2060
|| || | |||||||| || ||||| || || ||||| ||||| | ||| ||||| ||
Sbjct: 313 gtgatcgcgagtattgttcccgggccagggcgttccatcctgcataacccacccttcatc 254
Query: 2061 aggaactttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattc 2120
||| ||||| ||||| | ||| ||| | |||| ||| |||||||| |||||||| ||
Sbjct: 253 aggggtcttctgagcctttgaaaccagggcgtttatcctcactttgaactcttcatactc 194
Query: 2121 tctcttcatggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatc 2180
|| |||||||| || || ||||| ||||| | || ||||| ||||| |||| ||||||
Sbjct: 193 tcgtttcatggcacgccgctcttttacaaaggtcggttgcaccttgtctttcaggtaatc 134
Query: 2181 aattttctgggagaagta 2198
||||||||| || |||||
Sbjct: 133 aattttctgagaaaagta 116
Score = 54.0 bits (27), Expect = 4e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 387 gttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggc 446
||||||||| |||| || ||||||||||| || ||||| || | || |||||| ||||
Sbjct: 1951 gttctgccttcccagaagacccttgaggaagggatacagatgcaatatcacccagcaggc 1892
Query: 447 gaagaagagcttgccgaagagcgggccccacgactggta 485
|||||| ||||| || || ||||| ||||| ||||||||
Sbjct: 1891 gaagaatagctttccaaaaagcggtccccatgactggta 1853
Score = 48.1 bits (24), Expect = 0.003
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
||||||||||| | ||| ||||| || || |||||| ||||| || || || || ||
Sbjct: 1236 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 1177
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctc 1217
|||||||| ||||| || ||||| |||||||| ||||||||||||| || |||||
Sbjct: 1176 tctgtcaccgaaccatatatccatccgatctcctttccccattcagttttctcctc 1121
>dbj|BD236020.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 3851
Score = 186 bits (94), Expect = 5e-045
Identities = 249/301 (82%)
Strand = Plus / Minus
Query: 1759 aagcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattc 1818
|||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 1918 aagcacatgccttccctgattgccttgctattgttaatgtagtgatcacaatccagattc 1859
Query: 1819 aacatgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcacca 1878
| ||| || | ||||||| |||||||| || || ||||| | |||||||||||||||
Sbjct: 1858 agcataaatggagcattggtgagcacagcagaaacccgaaccaaagcattcatggcaccg 1799
Query: 1879 gctttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggt 1938
|| ||||||||||||||||| ||||| | ||| |||||||||||||| || | || ||
Sbjct: 1798 gccttcttgtgatgctggaaaccaggtctcttctcacgagaaacatatactagccgagga 1739
Query: 1939 agctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattcca 1998
||||||||||| || ||||| ||||| ||||||||||| | ||| || || ||||| |||
Sbjct: 1738 agctcattgccttctgtatcgaggccgccactgtgacccaagaacacttggatcatacca 1679
Query: 1999 ggatggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcc 2058
|||||||| | |||||| || || ||||| || || || |||||||| |||||||||||
Sbjct: 1678 ggatggtcacgggtattattaccaggccaaggcgtaccgtcttgcattgtccatccttcc 1619
Query: 2059 t 2059
|
Sbjct: 1618 t 1618
Score = 135 bits (68), Expect = 1e-029
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 2624 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 2565
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 2564 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 2505
Query: 1161 ttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcata 1220
||||| || || || |||||||| || | ||| |||||||||| || ||||| |||||
Sbjct: 2504 ctctgtgactgatccatagatccatccaagctcttttccccattccgttttgtcttcata 2445
Query: 1221 gccacagcttataacatggatagc 1244
|||||||| || ||||| |||||
Sbjct: 2444 tccacagctgatgacatgaatagc 2421
Score = 121 bits (61), Expect = 2e-025
Identities = 361/461 (78%)
Strand = Plus / Minus
Query: 2104 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2163
||||||||||||||||||||||||||||| ||||| ||||| ||||| | || || | |
Sbjct: 1573 ttgaattcttcatattctctcttcatggcacggcgctctttgacaaaggtgggttgaaat 1514
Query: 2164 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2223
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1513 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1454
Query: 2224 ttgtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgca 2283
| | | ||||| ||||||||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1453 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1394
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||| || ||||||| ||||| |||||||| ||||| || || || || || ||||||
Sbjct: 1393 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1334
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|| || || | ||| || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1333 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1274
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2463
|| || || ||||| || || | |||||||| || | | ||||| || ||||| ||
Sbjct: 1273 ggatctacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1214
Query: 2464 tcataccttaatgccagcctatcaaggtacgtctcccggttgattggaaaccacttaggg 2523
|| |||||||||| ||| | |||||| ||||| || || |||| || |||||||| ||
Sbjct: 1213 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1154
Query: 2524 aactgatccaatatccacgaaagagcaaaccagatctcaca 2564
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1153 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1113
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 3292 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 3233
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 3232 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3180
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1279 ggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatctc 1338
||||||||||||| ||||||||||||||| |||||| |||| ||||||||||| ||
Sbjct: 2386 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2327
Query: 1339 ttctc 1343
|||||
Sbjct: 2326 ttctc 2322
>gb|DR080401.1|DR080401 RTFEPL1_22_A02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_22_A02_A029 5', mRNA sequence
Length = 741
Score = 180 bits (91), Expect = 3e-043
Identities = 486/618 (78%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 671 gttgaaaacgcacccagtccccacatacactggcccctggatgccatctagacccttcat 612
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 611 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 552
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 551 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 492
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 491 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 432
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| || | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 431 aatgaatggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 372
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtag 1940
||||||||| ||||| ||||||| | ||| ||||||||||||||||| | ||| || ||
Sbjct: 371 tttcttgtggtgctgatatccaggcctcttctcacgagaaacatagacaagacgaggaag 312
Query: 1941 ctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
||| || |||||| ||||| || | |||||| || || || |||||||||||||||||
Sbjct: 311 ctcgttcccctcaatatcatgggctccactgcttcccagaaacacctgaatcattccagg 252
Query: 2001 atggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctc 2060
|| || | |||||||| || ||||| || || ||||| ||||| | ||| ||||| ||
Sbjct: 251 gtgatcgcgagtattgttcccgggccagggcgttccatcctgcataacccacccttcatc 192
Query: 2061 aggaactttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattc 2120
||| ||||| ||||| | ||| ||| | |||| ||| |||||||| ||||| || ||
Sbjct: 191 aggggtcttctgagcctttgaaaccagggcgtttatcctcactttgaactcttcgtactc 132
Query: 2121 tctcttcatggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatc 2180
|| |||||||| || || ||||| ||||| | || ||||| ||||| |||| ||||||
Sbjct: 131 tcgtttcatggcacgccgctcttttacaaaggtcggttgcaccttgtctttcaggtaatc 72
Query: 2181 aattttctgggagaagta 2198
||||||||| || |||||
Sbjct: 71 aattttctgagaaaagta 54
>gb|AY789651.1| Pinus taeda cellulose synthase catalytic subunit (CesA2) mRNA,
complete cds
Length = 3478
Score = 172 bits (87), Expect = 7e-041
Identities = 476/606 (78%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 1881 gttgaaaacgcatccagtccccacatacactggcccctggatgccatctagacccttcat 1822
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 1821 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 1762
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 1761 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 1702
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 1701 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 1642
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| || | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 1641 aatgaatggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 1582
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtag 1940
||||||||| ||||| ||||||| | ||| ||||||||||||||||| | || || ||
Sbjct: 1581 tttcttgtggtgctgatatccaggtctcttctcacgagaaacatagacaaggcgaggaag 1522
Query: 1941 ctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
||| || |||||| ||||| || | |||||| || || || |||||||||||||||||
Sbjct: 1521 ctcgttcccctcaatatcatgggctccactgcttcccagaaacacctgaatcattccagg 1462
Query: 2001 atggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctc 2060
|| || | |||||||| || ||||| || || ||||| ||||| | ||| ||||| ||
Sbjct: 1461 gtgatcgcgagtattgttcccgggccagggcgttccatcctgcataacccacccttcatc 1402
Query: 2061 aggaactttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattc 2120
||| ||||| ||||| | ||| ||| | |||| ||| |||||||| |||||||| ||
Sbjct: 1401 aggggtcttctgagcctttgaaaccagggcgtttatcctcactttgaactcttcatactc 1342
Query: 2121 tctcttcatggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatc 2180
|| |||||||| || || ||||| ||||| | || ||||| ||||| |||| ||||||
Sbjct: 1341 tcgtttcatggcacgccgctcttttacaaaggtcggttgcaccttgtctttcaggtaatc 1282
Query: 2181 aatttt 2186
||||||
Sbjct: 1281 aatttt 1276
Score = 54.0 bits (27), Expect = 4e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 387 gttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggc 446
||||||||| |||| || ||||||||||| || ||||| || | || |||||| ||||
Sbjct: 3099 gttctgccttcccagaagacccttgaggaagggatacagatgcaatatcacccagcaggc 3040
Query: 447 gaagaagagcttgccgaagagcgggccccacgactggta 485
|||||| ||||| || || ||||| ||||| ||||||||
Sbjct: 3039 gaagaatagctttccaaaaagcggtccccatgactggta 3001
Score = 48.1 bits (24), Expect = 0.003
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
||||||||||| | ||| ||||| || || |||||| ||||| || || || || ||
Sbjct: 2384 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 2325
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctc 1217
|||||||| ||||| || ||||| |||||||| ||||||||||||| || |||||
Sbjct: 2324 tctgtcactgaaccatatatccatccgatctcctttccccattcagttttctcctc 2269
Score = 44.1 bits (22), Expect = 0.042
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctcca 764
||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 2771 acccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 2722
>gb|AY262818.1| Pinus radiata cellulose synthase (CesA7) mRNA, partial cds
Length = 2588
Score = 172 bits (87), Expect = 7e-041
Identities = 485/618 (78%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 954 gttgaaaacgcatccagtccccacatacactggcccctggatgccatctagacccttcat 895
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 894 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 835
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 834 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 775
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 774 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 715
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| | | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 714 aatgaacggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 655
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtag 1940
||||||||| ||||| ||||||| | ||| ||||||||||||||||| | || || ||
Sbjct: 654 tttcttgtggtgctgatatccaggtctcttctcacgagaaacatagacaaggcgagggag 595
Query: 1941 ctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
||| || |||||| ||||| || | |||||| || || || |||||||||||||||||
Sbjct: 594 ctcgttcccctcaatatcatgggctccactgcttcccagaaacacctgaatcattccagg 535
Query: 2001 atggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctc 2060
|| || | |||||||| || ||||| || || ||||| ||||| | ||| ||||| ||
Sbjct: 534 gtgatcgcgagtattgttcccgggccagggcgttccatcctgcataacccacccttcatc 475
Query: 2061 aggaactttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattc 2120
||| ||||| ||||| | ||| ||| | |||| ||| |||||||| |||||||| ||
Sbjct: 474 aggggtcttctgagcctttgaaaccagggcgtttatcctcactttgaactcttcatactc 415
Query: 2121 tctcttcatggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatc 2180
|| |||||||| || || ||||| ||||| | || ||||| ||||| |||| ||||||
Sbjct: 414 tcgtttcatggcacgccgctcttttacaaaggtcggttgcaccttgtctttcaggtaatc 355
Query: 2181 aattttctgggagaagta 2198
||||||||| || |||||
Sbjct: 354 aattttctgagaaaagta 337
Score = 54.0 bits (27), Expect = 4e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 387 gttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggc 446
||||||||| |||| || ||||||||||| || ||||| || | || |||||| ||||
Sbjct: 2172 gttctgccttcccagaagacccttgaggaagggatacagatgcaatatcacccagcaggc 2113
Query: 447 gaagaagagcttgccgaagagcgggccccacgactggta 485
|||||| ||||| || || ||||| ||||| ||||||||
Sbjct: 2112 gaagaatagctttccaaaaagcggtccccatgactggta 2074
Score = 48.1 bits (24), Expect = 0.003
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 1102 ggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtct 1161
||||||||||| | ||| ||||| || || |||||| ||||| || || || || ||
Sbjct: 1457 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 1398
Query: 1162 tctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctc 1217
|||||||| ||||| || ||||| |||||||| ||||||||||||| || |||||
Sbjct: 1397 tctgtcactgaaccatatatccatccgatctcctttccccattcagttttctcctc 1342
Score = 44.1 bits (22), Expect = 0.042
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctcca 764
||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1844 acccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 1795
>gb|AY262819.1| Pinus radiata cellulose synthase (CesA8) mRNA, partial cds
Length = 2287
Score = 165 bits (83), Expect = 2e-038
Identities = 448/570 (78%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 582 gttgaaaacgcatccagtccccacatacactggcccctggatgccatctagacccttcat 523
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 522 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 463
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 462 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 403
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 402 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 343
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| || | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 342 aatgaatggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 283
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagaccaaacggggtag 1940
||||||||| ||||| ||||||| | ||||||||||||||||||||| | || || ||
Sbjct: 282 tttcttgtggtgctgatatccaggtctcttttcacgagaaacatagacaaggcgaggaag 223
Query: 1941 ctcattgccctcagtatcaaggccaccactgtgaccaaggaaaacctgaatcattccagg 2000
||| || |||||| ||||| || | |||||| || || || |||||||||||||||||
Sbjct: 222 ctcgttcccctcaatatcatgggctccactgcttcccagaaacacctgaatcattccagg 163
Query: 2001 atggtcccnggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctc 2060
|| || | |||||||| || ||||| || || ||||| ||||| | ||| ||||| ||
Sbjct: 162 gtgatcgcgagtattgttcccgggccagggcgttccatcctgcataacccacccttcatc 103
Query: 2061 aggaactttctgtgccttagcaacaaggccatttaccctaactttgaattcttcatattc 2120
||| ||||| ||||| | ||| ||| | |||| ||| |||||||| |||||||| ||
Sbjct: 102 aggggtcttctgagcctttgaaaccagggcgtttatcctcactttgaactcttcatactc 43
Query: 2121 tctcttcatggcccggcggtctttaacaaa 2150
|| |||||||| || || ||||| |||||
Sbjct: 42 tcgtttcatggcacgccgctcttttacaaa 13
Score = 54.0 bits (27), Expect = 4e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 387 gttctgcctgcccatgaggcccttgaggaacgggtacaggtggacgatgacccagaaggc 446
||||||||| |||| || ||||||||||| || ||||| || | || |||||| ||||
Sbjct: 1839 gttctgccttcccagaagacccttgaggaagggatacagatgcaatatcacccagcaggc 1780
Query: 447 gaagaagagcttgccgaagagcgggccccacgactggta 485
|||||| ||||| || || ||||| ||||| ||||||||
Sbjct: 1779 gaagaatagctttccaaaaagcggtccccatgactggta 1741
Score = 44.1 bits (22), Expect = 0.042
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctcca 764
||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1511 acccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 1462
>gb|DR384721.1|DR384721 RTHG1_4_D04.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_D04_A029 3', mRNA sequence
Length = 749
Score = 163 bits (82), Expect = 7e-038
Identities = 377/476 (79%)
Strand = Plus / Plus
Query: 1984 acctgaatcattccaggatggtcccnggtattgtttcctggccatggtgtgccatcttgc 2043
||||| ||||| || |||||||| | || ||||| ||||||||||| || |||||||||
Sbjct: 13 acctggatcatccccggatggtctcgagtgttgttgcctggccatggagttccatcttgc 72
Query: 2044 atgatccatccttcctcaggaactttctgtgccttagcaacaaggccatttaccctaact 2103
||| ||||||| || || || ||||| || || || || ||||| |||| | || |
Sbjct: 73 atggtccatccctcttctggcactttntgcgctttggccacaagagcattaatccggatc 132
Query: 2104 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2163
||| | ||||||||||| |||||||| || | || ||||||||||| ||||| || |||
Sbjct: 133 ttgtactcttcatattccctcttcattgctctccgttctttaacaaaggaaggctgtact 192
Query: 2164 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2223
|| |||||||| |||||||| ||||||| ||||| |||| ||||| || || || ||
Sbjct: 193 ttatccttcaaataatcaatcttctgggcaaagtagaattctggagccctgggctcgata 252
Query: 2224 ttgtacttcttaacaaatggtacccattttctagcaaactctgaagtctcagctagtgca 2283
|||| || || |||||| ||||| || || || || |||||||| || | || |
Sbjct: 253 ctgtattttttgcaaaatggcacccacttccttgcgaattctgaagtttctgaaagggtt 312
Query: 2284 tcaaatgtcagcatcgcagctccatcatcagatacatagcaagagaccttatccacaggg 2343
||||| |||| ||| || |||||||||||||| |||||||| || || ||||| |||||
Sbjct: 313 tcaaaagtcaacattgccgctccatcatcagaaacatagcatgaaactttatcgacagga 372
Query: 2344 taatccacagcaagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2403
|||||||| ||||| || || || || ||||| || |||||||||||||||||||| |
Sbjct: 373 taatccacggcaaggatagacagaacagtatttgctgtgacaagaggaggctcctttaga 432
Query: 2404 gggtcgactgtactgacgaaaatgtcaacagcagccaactgagatggctcaccttc 2459
|| || ||||||||||| ||||| |||||| | ||||||||||||||||| |||||
Sbjct: 433 ggatccactgtactgacaaaaatatcaacaccggccaactgagatggctctccttc 488
>gb|BE657157.1|BE657157 NXCI_064_G04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_064_G04 5' similar to Arabidopsis
thaliana sequence At4g18780 cellulose synthase catalytic
subunit (IRX1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 463
Score = 151 bits (76), Expect = 3e-034
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 367 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 308
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 307 atgcagtaaatggagcgccaccctcgnnagtgcatcttgaaacctgttagaatgtcttct 248
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 247 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 188
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 187 cagctgatcacatgtatagcttcttt 162
>gb|BE996873.1|BE996873 NXCI_103_E08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_103_E08 5' similar to Arabidopsis
thaliana sequence At5g44030 cellulose synthase catalytic
subunit-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 363
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 236 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 177
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 176 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 117
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 116 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 57
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 56 cagctgatcacatgtatagcttcttt 31
>gb|CF672886.1|CF672886 RTCNT1_74_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_74_D05_A029 5', mRNA sequence
Length = 763
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 444 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 385
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 384 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 325
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 324 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 265
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 264 cagctgatcacatgtatagcttcttt 239
>gb|DR054410.1|DR054410 RTCA1_17_D10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_17_D10_A029 3', mRNA sequence
Length = 821
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Plus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 507 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 566
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 567 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 626
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 627 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 686
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 687 cagctgatcacatgtatagcttcttt 712
Score = 56.0 bits (28), Expect = 1e-005
Identities = 142/180 (78%)
Strand = Plus / Plus
Query: 628 gtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcg 687
||||| || ||||||||||||||||| |||| |||||||| || || || || || ||
Sbjct: 87 gtgacagtaaagttggtgtcgatgcccgccaataccttgagaagaccttgaaaaactgca 146
Query: 688 aagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcg 747
|| | || || |||| || || |||||||| ||||| |||||||||||||| || |||
Sbjct: 147 aaaaaatgagcagagactcctccaatcacccaaaactgttcgttcctccaccattcttcg 206
Query: 748 atgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagg 807
|||| ||| || ||||| |||| ||||| | |||||| ||| || ||||||||||||
Sbjct: 207 atgctcactccactccatctcagttccagaacgcccgtcacgataatggagatgaagagg 266
>gb|DR110920.1|DR110920 RTS1_14_B08.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_14_B08_A029 3', mRNA sequence
Length = 632
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Plus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 301 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 360
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 361 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 420
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 421 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 480
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 481 cagctgatcacatgtatagcttcttt 506
>dbj|BD235989.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 619
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 324 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 265
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 264 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 205
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 204 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 145
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 144 cagctgatcacatgtatagcttcttt 119
>gb|AY789650.1| Pinus taeda cellulose synthase catalytic subunit (CesA1) mRNA,
complete cds
Length = 3127
Score = 147 bits (74), Expect = 4e-033
Identities = 173/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 2186 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 2127
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 2126 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 2067
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 2066 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 2007
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 2006 cagctgatcacatgtatagcttcttt 1981
Score = 93.7 bits (47), Expect = 5e-017
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 2305 ccatcatcagatacatagcaagagaccttatccacagggtaatccacagcaagaatggat 2364
||||| ||||| ||||||||||| || || |||||||||||||||||||| ||||||||
Sbjct: 935 ccatcgtcagagacatagcaagaaactttctccacagggtaatccacagccagaatggac 876
Query: 2365 agcacggtattggcagtgacaagaggaggctccttcattgggtcgactgtactgacgaa 2423
|| ||||| ||||| || || | ||||||||| |||| |||||| || ||||| |||||
Sbjct: 875 agaacggtgttggccgtaactaaaggaggctctttcagtgggtccacggtactcacgaa 817
Score = 63.9 bits (32), Expect = 5e-008
Identities = 167/212 (78%)
Strand = Plus / Minus
Query: 2014 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgt 2073
||||| || ||||| | ||| ||||| ||||||||||||||||| || || |||||
Sbjct: 1226 ttgttcccaggccaagctgttccatcctgcatgatccatccttcgtccggtgtcttctga 1167
Query: 2074 gccttagcaacaaggccatttaccctaactttgaattcttcatattctctcttcatggcc 2133
|| || || ||||| |||| | |||||||||| |||| || || ||||| ||||| ||
Sbjct: 1166 gctttggcgacaagcgcattgatcctaactttgtattcctcgtactctcttttcattgct 1107
Query: 2134 cggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgggag 2193
||||| || || ||||| ||| ||||| ||||| ||||||||||| | |||| | |||
Sbjct: 1106 cggcgctccttgacaaagttaggctgcaccttgtctttcaagtaatcgactttcagagag 1047
Query: 2194 aagtaccattcaggagctctaggttcaatgtt 2225
||||| |||||||||||| ||| || |||||
Sbjct: 1046 aagtagaattcaggagctcgaggctcgatgtt 1015
Score = 56.0 bits (28), Expect = 1e-005
Identities = 142/180 (78%)
Strand = Plus / Minus
Query: 628 gtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcg 687
||||| || ||||||||||||||||| |||| |||||||| || || || || || ||
Sbjct: 2606 gtgacagtaaagttggtgtcgatgcccgccaataccttgagaagaccttgaaaaactgca 2547
Query: 688 aagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcg 747
|| | || || |||| || || |||||||| ||||| |||||||||||||| || |||
Sbjct: 2546 aaaaaatgagcagagactcctccaatcacccaaaactgttcgttcctccaccattcttcg 2487
Query: 748 atgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagg 807
|||| ||| || ||||| |||| ||||| | |||||| ||| || ||||||||||||
Sbjct: 2486 atgctcactccactccatctcagttccagaacgcccgtcacgataatggagatgaagagg 2427
Score = 48.1 bits (24), Expect = 0.003
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 321 aacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcgg 380
||||||||||| ||||| || ||||||| |||||| | ||| | || |||||||| ||
Sbjct: 2910 aacccacagcagagagaaaatagacgccaacaggatagaccacaatacaacgatggtagg 2851
Query: 381 ggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| |||| |||||||| || ||||||||
Sbjct: 2850 cgtgcggttttgccgacccatgagacctttgaggaa 2815
Score = 44.1 bits (22), Expect = 0.042
Identities = 106/134 (79%)
Strand = Plus / Minus
Query: 1594 ccagttccgacataaactggtccttggatgccatcaagacctctcaagttaataccgaaa 1653
||||| || ||||| ||||| |||||||||||||| | || ||| ||| ||| ||||
Sbjct: 1646 ccagtacccacatacactggcccttggatgccatccaatcccttcatgttgatatcgaag 1587
Query: 1654 aacacggtgttcctgttggcatatcgatcattcctgtcaatgccatcgaatctctgggga 1713
||||| ||||| | |||||||||||||| | | || || |||||||| ||||| ||
Sbjct: 1586 aacacagtgtttcgattggcatatcgatcgctgcgatcgataccatcgaacctctgtggg 1527
Query: 1714 aactgaacgtagca 1727
||||| ||||||||
Sbjct: 1526 aactgcacgtagca 1513
>gb|BE187012.1|BE187012 NXNV_157_H10_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_157_H10 5' similar to Arabidopsis thaliana sequence
At4g18780 cellulose synthase catalytic subunit (IRX1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 477
Score = 143 bits (72), Expect = 6e-032
Identities = 172/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| |||||||
Sbjct: 325 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtnncttgggc 266
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 265 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 206
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 205 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 146
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 145 cagctgatcacatgtatagcttcttt 120
>gb|CO169549.1|CO169549 NDL1_7_F09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_F09_A029 5', mRNA sequence
Length = 802
Score = 135 bits (68), Expect = 1e-029
Identities = 167/200 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 202 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 143
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 142 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 83
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 82 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 23
Query: 1225 cagcttataacatggatagc 1244
||||| || ||||| |||||
Sbjct: 22 cagctgatcacatgtatagc 3
Score = 56.0 bits (28), Expect = 1e-005
Identities = 142/180 (78%)
Strand = Plus / Minus
Query: 628 gtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcg 687
||||| || ||||||||||||||||| |||| |||||||| || || || || || ||
Sbjct: 622 gtgacagtaaagttggtgtcgatgcccgccaataccttgagaagaccttgaaaaactgca 563
Query: 688 aagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcg 747
|| | || || |||| || || |||||||| ||||| |||||||||||||| || |||
Sbjct: 562 aaaaaatgagcagagactcctccaatcacccaaaactgttcgttcctccaccattcttcg 503
Query: 748 atgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagg 807
|||| ||| || ||||| |||| ||||| | |||||| ||| || ||||||||||||
Sbjct: 502 atgctcactccactccatctcagttccagaacgcccgtcacgataatggagatgaagagg 443
>dbj|BD235986.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 383
Score = 135 bits (68), Expect = 1e-029
Identities = 278/348 (79%)
Strand = Plus / Minus
Query: 1581 gttgaaaacacagccagttccgacataaactggtccttggatgccatcaagacctctcaa 1640
||||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| |||
Sbjct: 360 gttgaaaacgcatccagtccccacatacactggcccctggatgccatctagacccttcat 301
Query: 1641 gttaataccgaaaaacacggtgttcctgttggcatatcgatcattcctgtcaatgccatc 1700
||| ||| |||| || || ||||| ||||| ||||||||||||| | ||||| |||||
Sbjct: 300 gttgatatcgaagaaaacagtgtttctgtttgcatatcgatcatggcgatcaataccatc 241
Query: 1701 gaatctctggggaaactgaacgtagcagacactccttcctaggttagggtccataaggaa 1760
||||||||| || |||||||| ||||| | || |||| || | || ||||| || ||
Sbjct: 240 gaatctctgagggaactgaacatagcacagtttctttccaagttggggatccatgagaaa 181
Query: 1761 gcacatagcttccctgagagccttactgttgttaatgtagtgatcacaatcaagattcaa 1820
||||| || |||| | |||||||||||||| | |||||||||||||| || |||||
Sbjct: 180 acacattgcctcccgcacggccttactgttgttgagatagtgatcacaatccaggttcaa 121
Query: 1821 catgtattgtccattggtaagcacagctgagacacgaacaagagcattcatggcaccagc 1880
||| || | |||| || || || || ||||| ||||| || || ||||||||||| ||
Sbjct: 120 aatgaatggggcatttgttagaactgcagagactcgaaccagggcgttcatggcaccggc 61
Query: 1881 tttcttgtgatgctggaatccaggacgcttttcacgagaaacatagac 1928
||||||||| ||||| ||||||| | |||||||||||||||||||||
Sbjct: 60 tttcttgtggtgctgatatccaggtctcttttcacgagaaacatagac 13
>gb|CF668299.1|CF668299 RTCNT1_35_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D11_A029 5', mRNA sequence
Length = 769
Score = 133 bits (67), Expect = 6e-029
Identities = 318/402 (79%)
Strand = Plus / Minus
Query: 1785 actgttgttaatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcac 1844
||||||||| | |||||||||||||| || ||||| ||| || | |||| || || ||
Sbjct: 769 actgttgttgagatagtgatcacaatccaggttcaaaatgaatggggcatttgttagaac 710
Query: 1845 agctgagacacgaacaagagcattcatggcaccagctttcttgtgatgctggaatccagg 1904
|| ||||| ||||| || || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 709 tgcagagactcgaaccagggcgttcatggcaccggctttcttgtggtgctgatatccagg 650
Query: 1905 acgcttttcacgagaaacatagaccaaacggggtagctcattgccctcagtatcaaggcc 1964
| ||| ||||||||||||||||| | || || ||||| || |||||| ||||| || |
Sbjct: 649 tctcttctcacgagaaacatagacaaggcgaggaagctcgttcccctcaatatcatgggc 590
Query: 1965 accactgtgaccaaggaaaacctgaatcattccaggatggtcccnggtattgtttcctgg 2024
|||||| || || || ||||||||||||||||| || || | |||||||| || ||
Sbjct: 589 tccactgcttcccagaaacacctgaatcattccagggtgatcgcgagtattgttcccggg 530
Query: 2025 ccatggtgtgccatcttgcatgatccatccttcctcaggaactttctgtgccttagcaac 2084
||| || || ||||| ||||| | ||| ||||| ||||| ||||| ||||| | |||
Sbjct: 529 ccagggcgttccatcctgcataacccacccttcatcaggggtcttctgagcctttgaaac 470
Query: 2085 aaggccatttaccctaactttgaattcttcatattctctcttcatggcccggcggtcttt 2144
||| | |||| ||| |||||||| ||||||||||||| |||||||| || || |||||
Sbjct: 469 cagggcgtttatcctcactttgaactcttcatattctcgtttcatggcacgccgctcttt 410
Query: 2145 aacaaatgaagggtgcactttgtccttcaagtaatcaatttt 2186
||||| | || ||||| ||||| |||| ||||||||||||
Sbjct: 409 tacaaaggtcggttgcaccttgtctttcaggtaatcaatttt 368
>gb|CX646526.1|CX646526 COLD1_9_H07.g1_A029 Root cold Pinus taeda cDNA clone COLD1_9_H07_A029
5', mRNA sequence
Length = 853
Score = 131 bits (66), Expect = 2e-028
Identities = 171/206 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 225 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 166
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 165 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 106
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 105 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 46
Query: 1225 cagcttataacatggatagcttcttt 1250
|| | || ||||| |||||||||||
Sbjct: 45 caaatgatcacatgtatagcttcttt 20
Score = 56.0 bits (28), Expect = 1e-005
Identities = 142/180 (78%)
Strand = Plus / Minus
Query: 628 gtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcg 687
||||| || ||||||||||||||||| |||| |||||||| || || || || || ||
Sbjct: 645 gtgacagtaaagttggtgtcgatgcccgccaataccttgagaagaccttgaaaaactgca 586
Query: 688 aagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcg 747
|| | || || |||| || || |||||||| ||||| |||||||||||||| || |||
Sbjct: 585 aaaaaatgagcagagactcctccaatcacccaaaactgttcgttcctccaccattcttcg 526
Query: 748 atgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagg 807
|||| ||| || ||||| |||| ||||| | |||||| ||| || ||||||||||||
Sbjct: 525 atgctcactccactccatctcagttccagaacgcccgtcacgataatggagatgaagagg 466
>gb|BG317558.1|BG317558 NXPV_003_B08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_003_B08 5' similar to Arabidopsis
thaliana sequence At5g05170 cellulose synthase catalytic
subunit (Ath-B) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 536
Score = 129 bits (65), Expect = 9e-028
Identities = 169/204 (82%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||| ||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 343 cacntggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 284
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 283 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 224
Query: 1161 ttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcata 1220
||||| || || || |||||||| || | ||| |||||||||| || ||||| |||||
Sbjct: 223 ctctgtgactgatccatagatccatccaagctcttttccccattccgttttgtcttcata 164
Query: 1221 gccacagcttataacatggatagc 1244
|||||||| || ||||| |||||
Sbjct: 163 tccacagctgatgacatgaatagc 140
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1279 ggaacaccaccatactccatcagagtggaggcaacaaacgctgcggactggccaaatctc 1338
||||||||||||| ||||||||||||||| |||||| |||| ||||||||||| ||
Sbjct: 105 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 46
Query: 1339 ttctc 1343
|||||
Sbjct: 45 ttctc 41
>gb|BQ701215.1|BQ701215 NXSI_023_H05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_023_H05 5' similar to Arabidopsis thaliana
sequence At4g18780 cellulose synthase catalytic subunit
(IRX1) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 492
Score = 129 bits (65), Expect = 9e-028
Identities = 155/185 (83%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 190 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 131
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 130 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 71
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 70 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 11
Query: 1225 cagct 1229
|||||
Sbjct: 10 cagct 6
>gb|AA556746.1|AA556746 588 Loblolly pine NA Pinus taeda cDNA clone 1NAB10D, mRNA sequence
Length = 546
Score = 127 bits (64), Expect = 4e-027
Identities = 170/206 (82%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||
Sbjct: 503 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtntcntgggc 444
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| | ||| |||||||||||| || || ||||||||||||
Sbjct: 443 atgcagtaaatggagcgccaccttcggcagtgcatcttgaaacctgttagaatgtcttct 384
Query: 1165 gtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcatagcca 1224
||||||||||| |||||||| |||| ||| | |||||||| || || || || ||||||
Sbjct: 383 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 324
Query: 1225 cagcttataacatggatagcttcttt 1250
||||| || ||||| |||||||||||
Sbjct: 323 cagctgatcacatgtatagcttcttt 298
>gb|DR118589.1|DR118589 RTMG1_18_A07.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_18_A07_A029 3', mRNA sequence
Length = 610
Score = 121 bits (61), Expect = 2e-025
Identities = 158/189 (83%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 416 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 475
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 476 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 535
Query: 1161 ttctgtcacagaaccgtagatccacccgatctcagttccccattcagtcttgtcctcata 1220
||||| || || || |||||||| || | ||| |||||||||| || ||||| |||||
Sbjct: 536 ctctgtgactgatccatagatccatccaagctcttttccccattccgt-ttgtcttcata 594
Query: 1221 gccacagct 1229
||||||||
Sbjct: 595 tccacagct 603
Score = 42.1 bits (21), Expect = 0.17
Identities = 72/89 (80%)
Strand = Plus / Plus
Query: 715 acccagaactgctcgttcctccaccactcgtcgatgcccaccccgctccacctcatctcc 774
||||||||||| || || | |||||| || || |||| ||| || ||||||||||| |||
Sbjct: 90 acccagaactgttcatttcgccaccattcttcaatgctcactccactccacctcatttcc 149
Query: 775 aggatgcccgtggcgaagatcgagatgaa 803
|| || || ||||| || || ||||||||
Sbjct: 150 agaataccagtggcaaaaattgagatgaa 178
>gb|AY262815.1| Pinus radiata cellulose synthase (CesA3) mRNA, partial cds
Length = 1333
Score = 121 bits (61), Expect = 2e-025
Identities = 124/145 (85%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| ||||| | |||||||
Sbjct: 203 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 144
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 143 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 84
Query: 1165 gtcacagaaccgtagatccacccga 1189
||||||||||| |||||||| ||||
Sbjct: 83 gtcacagaaccatagatccatccga 59
Score = 56.0 bits (28), Expect = 1e-005
Identities = 142/180 (78%)
Strand = Plus / Minus
Query: 628 gtgacggtgaagttggtgtcgatgccggccagcaccttgagcaggccctggaacacggcg 687
||||| || ||||||||||||||||| |||| |||||||| || || || || || ||
Sbjct: 623 gtgacagtaaagttggtgtcgatgcccgccaataccttgagaagaccttgaaaaactgca 564
Query: 688 aagaggtgcgcggagatgcccccgatcacccagaactgctcgttcctccaccactcgtcg 747
|| | || || |||| || || |||||||| ||||| |||||||||||||| || |||
Sbjct: 563 aaaaaatgagcagagactcctccaatcacccaaaactgttcgttcctccaccattcttcg 504
Query: 748 atgcccaccccgctccacctcatctccaggatgcccgtggcgaagatcgagatgaagagg 807
|||| ||| || ||||| |||| ||||| | |||||| ||| || ||||||||||||
Sbjct: 503 atgctcactccactccatctcagttccagaacgcccgtcacgataatggagatgaagagg 444
Score = 48.1 bits (24), Expect = 0.003
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 321 aacccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcgg 380
||||||||||| ||||| || ||||||| |||||| | ||| | || |||||||| ||
Sbjct: 927 aacccacagcagagagaaaatagacgccaacaggatagaccacaatacaacgatggtagg 868
Query: 381 ggtgcggttctgcctgcccatgaggcccttgaggaa 416
|||||||| |||| |||||||| || ||||||||
Sbjct: 867 cgtgcggttttgccgacccatgagacctttgaggaa 832
>gb|BV079715.1| Pp_CesA3 Pinus pinaster megagametophytes Pinus pinaster STS genomic,
sequence tagged site
Length = 488
Score = 113 bits (57), Expect = 5e-023
Identities = 123/145 (84%)
Strand = Plus / Minus
Query: 1045 tggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgcttgggc 1104
|||| |||||| || || |||||||| || |||||||||||||| || || | |||||||
Sbjct: 395 tggtgcagacgatctgatagattgataggagcagaccccttgaatgccggtctcttgggc 336
Query: 1105 atgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtcttct 1164
|||||||| || || ||||| ||||| |||||||||||| || || ||||||||||||
Sbjct: 335 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 276
Query: 1165 gtcacagaaccgtagatccacccga 1189
||||||||||| |||||||| ||||
Sbjct: 275 gtcacagaaccatagatccatccga 251
Score = 42.1 bits (21), Expect = 0.17
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 1198 ccccattcagtcttgtcctcatagccacagcttataacatggatagcttcttt 1250
|||||||| || || || || ||||||||||| || ||||| |||||||||||
Sbjct: 118 ccccattcggttttctcttcgtagccacagctgatcacatgtatagcttcttt 66
>gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764673.1|AY764673S1 Pinus taeda isolate 11 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764675.1|AY764675S1 Pinus taeda isolate 16 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764677.1|AY764677S1 Pinus taeda isolate 25 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764679.1|AY764679S1 Pinus taeda isolate 7 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014294.1|SEG_AY764681S Pinus taeda isolate 6 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764681.1|AY764681S1 Pinus taeda isolate 6 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014295.1|SEG_AY764683S Pinus taeda isolate 4 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764683.1|AY764683S1 Pinus taeda isolate 4 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014296.1|SEG_AY764685S Pinus taeda isolate 26 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764685.1|AY764685S1 Pinus taeda isolate 26 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014297.1|SEG_AY764687S Pinus taeda isolate 9 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764687.1|AY764687S1 Pinus taeda isolate 9 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014298.1|SEG_AY764689S Pinus taeda isolate 23 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764689.1|AY764689S1 Pinus taeda isolate 23 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
>gb|AH014299.1|SEG_AY764691S Pinus taeda isolate 13 cellulose synthase genes, partial cds
Length = 1023
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Score = 97.6 bits (49), Expect = 3e-018
Identities = 97/113 (85%)
Strand = Plus / Minus
Query: 370 acgatggtcggggtgcggttctgcctgcccatgaggcccttgaggaacgggtacaggtgg 429
|||||||| || || |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 840 acgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacaggtgc 781
Query: 430 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 482
|| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||
Sbjct: 780 acaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
>gb|AY764691.1|AY764691S1 Pinus taeda isolate 13 cellulose synthase gene, partial cds
Length = 571
Score = 111 bits (56), Expect = 2e-022
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 1041 cacctggttcagacggtccgaaagattgatgggggcagaccccttgaaagctggccgctt 1100
||||||||||| |||||| || |||||||| || |||||||| ||||| |||| || ||
Sbjct: 424 cacctggttcaaacggtctgatagattgattggagcagaccctttgaatgctgctcgttt 365
Query: 1101 gggcatgcagtagatcgaccgccagcctcgcgcgtgcatcttgaatccggtgagaatgtc 1160
|||||| ||||| || |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 364 gggcatacagtaaatggaccgccagcctcgagtgtgcatcttgaatccagtcagaatgtc 305
Query: 1161 ttctgtcacagaaccgtagatcca 1184
||||| || || || ||||||||
Sbjct: 304 ctctgtgactgatccatagatcca 281
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 418,283
Number of Sequences: 355925
Number of extensions: 418283
Number of successful extensions: 103599
Number of sequences better than 0.5: 233
Number of HSP's better than 0.5 without gapping: 225
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 102933
Number of HSP's gapped (non-prelim): 629
length of query: 3807
length of database: 217,277,237
effective HSP length: 20
effective length of query: 3787
effective length of database: 210,158,737
effective search space: 795871137019
effective search space used: 795871137019
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)