BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448339.2.1
(931 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX249556.1|BX249556 BX249556 Pinus pinaster differenciat... 198 3e-049
gb|BX250256.1|BX250256 BX250256 Pinus pinaster differenciat... 198 3e-049
gb|BX252316.1|BX252316 BX252316 Pinus pinaster differenciat... 198 3e-049
gb|BX678421.1|BX678421 BX678421 RS Pinus pinaster cDNA clon... 198 3e-049
gb|BG317975.1|BG317975 NXPV_008_A10_F NXPV (Nsf Xylem Plani... 188 3e-046
gb|CF389667.1|CF389667 RTDR2_8_F08.g1_A021 Loblolly pine ro... 188 3e-046
gb|CF390778.1|CF390778 RTDR2_17_A10.g1_A021 Loblolly pine r... 188 3e-046
gb|CF392512.1|CF392512 RTDR3_6_H10.g1_A022 Loblolly pine ro... 188 3e-046
gb|CF478088.1|CF478088 RTWW3_17_G08.g1_A022 Well-watered lo... 188 3e-046
gb|CF671726.1|CF671726 RTCNT1_58_H07.g1_A029 Root control P... 188 3e-046
gb|CO174183.1|CO174183 NDL1_42_H05.b1_A029 Needles control ... 188 3e-046
gb|CO197915.1|CO197915 GEO1_10_B04.b1_A029 Root gravitropis... 188 3e-046
gb|CO198879.1|CO198879 GEO1_17_F05.b1_A029 Root gravitropis... 188 3e-046
gb|CO198953.1|CO198953 GEO1_17_E11.g1_A029 Root gravitropis... 188 3e-046
gb|CV033635.1|CV033635 RTNACL1_35_E07.g1_A029 Roots plus ad... 188 3e-046
gb|CV034479.1|CV034479 RTNACL1_9_E09.b1_A029 Roots plus add... 188 3e-046
gb|CV034536.1|CV034536 RTNACL1_9_E09.g1_A029 Roots plus add... 188 3e-046
gb|CX647187.1|CX647187 COLD1_14_E02.b1_A029 Root cold Pinus... 188 3e-046
gb|CX647250.1|CX647250 COLD1_14_E02.g1_A029 Root cold Pinus... 188 3e-046
gb|CX651736.1|CX651736 COLD1_54_A11.g1_A029 Root cold Pinus... 188 3e-046
gb|CX651946.1|CX651946 COLD1_55_G12.g1_A029 Root cold Pinus... 188 3e-046
gb|DN463457.1|DN463457 EST959256 Sequencing ESTs from loblo... 188 3e-046
gb|DN627545.1|DN627545 EST978361 Subtracted pine embryo lib... 188 3e-046
gb|DR011143.1|DR011143 HEAT1_3_F10.g1_A029 Root at 37 C for... 188 3e-046
gb|DR019627.1|DR019627 STRS1_31_G06.b1_A034 Shoot tip pitch... 188 3e-046
gb|DR048265.1|DR048265 RTBOR1_7_D03.g2_A029 Roots plus adde... 188 3e-046
gb|DR049752.1|DR049752 RTBOR1_18_G09.g1_A029 Roots plus add... 188 3e-046
gb|DR117517.1|DR117517 RTMG1_7_A10.g1_A029 Roots minus magn... 188 3e-046
gb|DR120748.1|DR120748 RTMG1_31_D12.g1_A029 Roots minus mag... 188 3e-046
gb|DR181145.1|DR181145 RTMNUT1_37_C10.b2_A029 Roots minus m... 188 3e-046
gb|DR181222.1|DR181222 RTMNUT1_37_C10.g2_A029 Roots minus m... 188 3e-046
gb|DR387697.1|DR387697 RTHG1_23_B10.g2_A029 Roots plus adde... 188 3e-046
gb|DR744013.1|DR744013 RTCU1_19_E03.g1_A029 Roots plus adde... 188 3e-046
gb|DT627173.1|DT627173 EST1160249 Sequencing ESTs from lobl... 188 3e-046
gb|CF479351.1|CF479351 RTWW3_23_G01.g1_A022 Well-watered lo... 180 7e-044
gb|CV034473.1|CV034473 RTNACL1_9_D09.b1_A029 Roots plus add... 180 7e-044
gb|CV034530.1|CV034530 RTNACL1_9_D09.g1_A029 Roots plus add... 180 7e-044
gb|CX650028.1|CX650028 COLD1_43_C02.b1_A029 Root cold Pinus... 180 7e-044
gb|CX650106.1|CX650106 COLD1_43_C02.g1_A029 Root cold Pinus... 180 7e-044
gb|DR025461.1|DR025461 STRS1_71_F04.g1_A034 Shoot tip pitch... 180 7e-044
gb|DR078647.1|DR078647 RTFEPL1_6_B04.b1_A029 Roots plus add... 180 7e-044
gb|DR078727.1|DR078727 RTFEPL1_6_B04.g1_A029 Roots plus add... 180 7e-044
gb|BF778586.1|BF778586 NXSI_088_D07_F NXSI (Nsf Xylem Side ... 178 3e-043
gb|BQ702704.1|BQ702704 NXSI_131_F04_F NXSI (Nsf Xylem Side ... 178 3e-043
gb|CO197983.1|CO197983 GEO1_10_B04.g1_A029 Root gravitropis... 178 3e-043
gb|DR120664.1|DR120664 RTMG1_31_D12.b1_A029 Roots minus mag... 178 3e-043
gb|DR743944.1|DR743944 RTCU1_19_E03.b1_A029 Roots plus adde... 178 3e-043
gb|BX249420.1|BX249420 BX249420 Pinus pinaster differenciat... 176 1e-042
gb|AA556455.1|AA556455 310 Loblolly pine C Pinus taeda cDNA... 174 4e-042
gb|AW011444.1|AW011444 ST20G12 Pine TriplEx shoot tip libra... 174 4e-042
gb|BQ635040.1|BQ635040 NXRV076_C01_F NXRV (Nsf Xylem Root w... 172 2e-041
gb|CX651870.1|CX651870 COLD1_55_G12.b1_A029 Root cold Pinus... 172 2e-041
gb|DR022282.1|DR022282 STRS1_50_B07.b1_A034 Shoot tip pitch... 172 2e-041
gb|DR101129.1|DR101129 STRR1_70_F06.g1_A033 Stem Response R... 172 2e-041
gb|BI643824.1|BI643824 NXPV_123_D09_F NXPV (Nsf Xylem Plani... 170 7e-041
gb|BQ702159.1|BQ702159 NXSI_125_F03_F NXSI (Nsf Xylem Side ... 170 7e-041
gb|BQ702297.1|BQ702297 NXSI_127_B04_F NXSI (Nsf Xylem Side ... 170 7e-041
gb|DR020200.1|DR020200 STRS1_35_G05.b1_A034 Shoot tip pitch... 165 4e-039
gb|CX651667.1|CX651667 COLD1_54_A11.b1_A029 Root cold Pinus... 163 2e-038
gb|BE644001.1|BE644001 NXCI_053_C12_F NXCI (Nsf Xylem Compr... 161 6e-038
gb|BG318118.1|BG318118 NXPV_010_F12_F NXPV (Nsf Xylem Plani... 159 2e-037
gb|CF389555.1|CF389555 RTDR2_8_F08.b1_A021 Loblolly pine ro... 153 2e-035
gb|CF479295.1|CF479295 RTWW3_23_E01.b1_A022 Well-watered lo... 153 2e-035
gb|CX647911.1|CX647911 COLD1_25_G05.b1_A029 Root cold Pinus... 153 2e-035
gb|DR048182.1|DR048182 RTBOR1_7_D03.b2_A029 Roots plus adde... 153 2e-035
gb|DR049675.1|DR049675 RTBOR1_18_G09.b1_A029 Roots plus add... 153 2e-035
gb|DR177395.1|DR177395 RTMNUT1_5_C10.b1_A029 Roots minus mi... 153 2e-035
gb|DR177483.1|DR177483 RTMNUT1_5_C10.g1_A029 Roots minus mi... 153 2e-035
gb|DR387618.1|DR387618 RTHG1_23_B10.b1_A029 Roots plus adde... 153 2e-035
gb|AA556240.1|AA556240 95 Loblolly pine CA Pinus taeda cDNA... 151 6e-035
gb|AI812690.1|AI812690 17H7 Pine Lambda Zap Xylem library P... 151 6e-035
gb|BX251755.1|BX251755 BX251755 Pinus pinaster differenciat... 151 6e-035
gb|BX254052.1|BX254052 BX254052 Pinus pinaster differenciat... 151 6e-035
gb|BF609066.1|BF609066 NXSI_040_A08_F NXSI (Nsf Xylem Side ... 151 6e-035
gb|BQ633955.1|BQ633955 NXRV062_H08_F NXRV (Nsf Xylem Root w... 151 6e-035
gb|CF672315.1|CF672315 RTCNT1_62_F02.g1_A029 Root control P... 151 6e-035
gb|BX679956.1|BX679956 BX679956 RS Pinus pinaster cDNA clon... 151 6e-035
gb|CX648547.1|CX648547 COLD1_29_H01.b1_A029 Root cold Pinus... 151 6e-035
gb|CX648626.1|CX648626 COLD1_29_H01.g1_A029 Root cold Pinus... 151 6e-035
gb|CX648647.1|CX648647 COLD1_30_B04.b1_A029 Root cold Pinus... 151 6e-035
gb|CX648722.1|CX648722 COLD1_30_B04.g1_A029 Root cold Pinus... 151 6e-035
gb|CX649591.1|CX649591 COLD1_36_F02.b1_A029 Root cold Pinus... 151 6e-035
gb|DR014446.1|DR014446 HEAT1_49_C03.g1_A029 Root at 37 C fo... 151 6e-035
gb|DR015147.1|DR015147 STRS1_1_F08.g1_A034 Shoot tip pitch ... 151 6e-035
gb|DR015277.1|DR015277 STRS1_2_C01.g1_A034 Shoot tip pitch ... 151 6e-035
gb|DR015325.1|DR015325 STRS1_2_G03.g1_A034 Shoot tip pitch ... 151 6e-035
gb|DR019734.1|DR019734 STRS1_32_C04.b1_A034 Shoot tip pitch... 151 6e-035
gb|DR019807.1|DR019807 STRS1_32_C04.g1_A034 Shoot tip pitch... 151 6e-035
gb|DR110669.1|DR110669 RTS1_12_F03.b1_A029 Roots minus sulf... 151 6e-035
gb|DR110755.1|DR110755 RTS1_12_F03.g1_A029 Roots minus sulf... 151 6e-035
gb|DR181382.1|DR181382 RTMNUT1_38_C05.g2_A029 Roots minus m... 151 6e-035
gb|DR384469.1|DR384469 RTHG1_2_A10.g1_A029 Roots plus added... 151 6e-035
gb|BX253280.1|BX253280 BX253280 Pinus pinaster differenciat... 149 2e-034
gb|BG040770.1|BG040770 NXSI_114_G09_F NXSI (Nsf Xylem Side ... 149 2e-034
gb|DN632790.1|DN632790 EST983606 Subtracted pine embryo lib... 149 2e-034
gb|DR090603.1|DR090603 RTAL1_16_E07.b1_A029 Roots plus adde... 149 2e-034
gb|BX250820.1|BX250820 BX250820 Pinus pinaster differenciat... 145 4e-033
gb|DN632755.1|DN632755 EST983571 Subtracted pine embryo lib... 145 4e-033
gb|DR119048.1|DR119048 RTMG1_20_G05.g1_A029 Roots minus mag... 143 1e-032
gb|DR384396.1|DR384396 RTHG1_2_A10.b1_A029 Roots plus added... 143 1e-032
gb|DR386687.1|DR386687 RTHG1_16_G02.g1_A029 Roots plus adde... 143 1e-032
gb|AW984997.1|AW984997 NXNV_118_H06_F Nsf Xylem Normal wood... 141 6e-032
gb|BQ700547.1|BQ700547 NXRV108_B05_F NXRV (Nsf Xylem Root w... 141 6e-032
gb|BX253662.1|BX253662 BX253662 Pinus pinaster differenciat... 139 2e-031
gb|CF388456.1|CF388456 RTDR2_3_E07.b1_A021 Loblolly pine ro... 139 2e-031
gb|CF388509.1|CF388509 RTDR2_3_E07.g1_A021 Loblolly pine ro... 139 2e-031
gb|CF390551.1|CF390551 RTDR2_20_E08.b1_A021 Loblolly pine r... 139 2e-031
gb|CF390693.1|CF390693 RTDR2_20_E08.g1_A021 Loblolly pine r... 139 2e-031
gb|CF395605.1|CF395605 RTDS2_12_A09.g1_A021 Drought-stresse... 139 2e-031
gb|CF475244.1|CF475244 RTWW2_14_A08.g1_A021 Well-watered lo... 139 2e-031
gb|CF666365.1|CF666365 RTCNT1_22_F05.g1_A029 Root control P... 139 2e-031
gb|CF667066.1|CF667066 RTCNT1_28_A12.b1_A029 Root control P... 139 2e-031
gb|CF670785.1|CF670785 RTCNT1_52_C04.g1_A029 Root control P... 139 2e-031
gb|CO162611.1|CO162611 FLD1_36_A02.g1_A029 Root flooded Pin... 139 2e-031
gb|CO163778.1|CO163778 FLD1_43_E10.g1_A029 Root flooded Pin... 139 2e-031
gb|CO165581.1|CO165581 FLD1_55_C02.g1_A029 Root flooded Pin... 139 2e-031
gb|CO166328.1|CO166328 FLD1_61_D11.b1_A029 Root flooded Pin... 139 2e-031
gb|CO166335.1|CO166335 FLD1_61_E11.b1_A029 Root flooded Pin... 139 2e-031
gb|CO199552.1|CO199552 GEO2_2_B07.b1_A032 Root gravitropism... 139 2e-031
gb|CO199627.1|CO199627 GEO2_2_B07.g1_A032 Root gravitropism... 139 2e-031
gb|CO201761.1|CO201761 RTCNT2_8_A09.b1_A029 Root control 2 ... 139 2e-031
gb|CO201833.1|CO201833 RTCNT2_8_A09.g1_A029 Root control 2 ... 139 2e-031
gb|CO365353.1|CO365353 RTK1_25_E02.b1_A029 Roots minus pota... 139 2e-031
gb|CO369887.1|CO369887 RTK1_55_A07.b1_A029 Roots minus pota... 139 2e-031
gb|CO369944.1|CO369944 RTK1_55_A07.g1_A029 Roots minus pota... 139 2e-031
gb|CV034033.1|CV034033 RTNACL1_38_D12.b1_A029 Roots plus ad... 139 2e-031
gb|CX647527.1|CX647527 COLD1_17_H05.b1_A029 Root cold Pinus... 139 2e-031
gb|CX650413.1|CX650413 COLD1_45_B08.g1_A029 Root cold Pinus... 139 2e-031
gb|DR017706.1|DR017706 STRS1_18_A07.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR019365.1|DR019365 STRS1_29_C05.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR019808.1|DR019808 STRS1_32_C05.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR021844.1|DR021844 STRS1_47_F09.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR023235.1|DR023235 STRS1_56_G09.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR023325.1|DR023325 STRS1_56_G09.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR050995.1|DR050995 RTBOR1_27_B06.b1_A029 Roots plus add... 139 2e-031
gb|DR051075.1|DR051075 RTBOR1_27_B06.g1_A029 Roots plus add... 139 2e-031
gb|DR059910.1|DR059910 RTNIT1_20_B08.g1_A029 Roots minus ni... 139 2e-031
gb|DR069345.1|DR069345 RTDK1_6_D10.g1_A029 Roots, dark Pinu... 139 2e-031
gb|DR078092.1|DR078092 RTFEPL1_1_H02.g1_A029 Roots plus add... 139 2e-031
gb|DR090678.1|DR090678 RTAL1_16_E07.g1_A029 Roots plus adde... 139 2e-031
gb|DR095958.1|DR095958 STRR1_24_F10.g1_A033 Stem Response R... 139 2e-031
gb|DR102440.1|DR102440 STRR1_81_D04.b1_A033 Stem Response R... 139 2e-031
gb|DR102508.1|DR102508 STRR1_81_D04.g1_A033 Stem Response R... 139 2e-031
gb|DR109447.1|DR109447 RTS1_2_C04.b1_A029 Roots minus sulfu... 139 2e-031
gb|DR110127.1|DR110127 RTS1_9_B11.b1_A029 Roots minus sulfu... 139 2e-031
gb|DR110203.1|DR110203 RTS1_9_B11.g1_A029 Roots minus sulfu... 139 2e-031
gb|DR111506.1|DR111506 RTS1_18_F09.b1_A029 Roots minus sulf... 139 2e-031
gb|DR118119.1|DR118119 RTMG1_11_F07.b1_A029 Roots minus mag... 139 2e-031
gb|DR160783.1|DR160783 RTFE1_8_B10.b1_A029 Roots minus iron... 139 2e-031
gb|DR160871.1|DR160871 RTFE1_8_B10.g1_A029 Roots minus iron... 139 2e-031
gb|DR161344.1|DR161344 RTFE1_11_F07.b1_A029 Roots minus iro... 139 2e-031
gb|DR161433.1|DR161433 RTFE1_11_F07.g1_A029 Roots minus iro... 139 2e-031
gb|DR178994.1|DR178994 RTMNUT1_15_G07.b1_A029 Roots minus m... 139 2e-031
gb|DR181292.1|DR181292 RTMNUT1_38_A12.b2_A029 Roots minus m... 139 2e-031
gb|DR182293.1|DR182293 RTMNUT1_44_C08.b1_A029 Roots minus m... 139 2e-031
gb|DR182368.1|DR182368 RTMNUT1_44_C08.g1_A029 Roots minus m... 139 2e-031
gb|DR384638.1|DR384638 RTHG1_3_C07.g1_A029 Roots plus added... 139 2e-031
gb|DR388079.1|DR388079 RTHG1_26_B07.b1_A029 Roots plus adde... 139 2e-031
gb|DR742416.1|DR742416 RTCU1_3_H03.g2_A029 Roots plus added... 139 2e-031
gb|AL751220.1|AL751220 AL751220 RS Pinus pinaster cDNA clon... 137 9e-031
gb|BI397717.1|BI397717 NXPV_104_E03_F NXPV (Nsf Xylem Plani... 137 9e-031
gb|DN629369.1|DN629369 EST980185 Subtracted pine embryo lib... 137 9e-031
gb|AW043194.1|AW043194 ST30D11 Pine TriplEx shoot tip libra... 135 4e-030
gb|BM159019.1|BM159019 NXLV_042_F11_F NXLV (Nsf Xylem Late ... 135 4e-030
gb|CF388437.1|CF388437 RTDR2_3_H10.b1_A021 Loblolly pine ro... 135 4e-030
gb|DR020276.1|DR020276 STRS1_35_G05.g1_A034 Shoot tip pitch... 135 4e-030
gb|DR112364.1|DR112364 RTS1_27_E02.g1_A029 Roots minus sulf... 135 4e-030
gb|BX250989.1|BX250989 BX250989 Pinus pinaster differenciat... 133 1e-029
gb|CO367762.1|CO367762 RTK1_36_A09.g1_A029 Roots minus pota... 133 1e-029
gb|CO166140.1|CO166140 FLD1_59_D07.g1_A029 Root flooded Pin... 131 6e-029
gb|DR017136.1|DR017136 STRS1_14_F11.b1_A034 Shoot tip pitch... 131 6e-029
gb|DR017214.1|DR017214 STRS1_14_F11.g1_A034 Shoot tip pitch... 131 6e-029
gb|DR078008.1|DR078008 RTFEPL1_1_H01.b1_A029 Roots plus add... 131 6e-029
gb|DR078091.1|DR078091 RTFEPL1_1_H01.g1_A029 Roots plus add... 131 6e-029
gb|DR386434.1|DR386434 RTHG1_15_E06.b1_A029 Roots plus adde... 131 6e-029
gb|DR386513.1|DR386513 RTHG1_15_E06.g1_A029 Roots plus adde... 131 6e-029
gb|AW011329.1|AW011329 ST19E04 Pine TriplEx shoot tip libra... 127 9e-028
gb|BF517349.1|BF517349 NXSI_013_D11_F NXSI (Nsf Xylem Side ... 127 9e-028
gb|BF518248.1|BF518248 NXSI_036_G10_F NXSI (Nsf Xylem Side ... 127 9e-028
gb|BQ697157.1|BQ697157 NXPV_050_C01_F NXPV (Nsf Xylem Plani... 127 9e-028
gb|CR393824.1|CR393824 CR393824 RN Pinus pinaster cDNA clon... 127 9e-028
gb|CX649670.1|CX649670 COLD1_36_F02.g1_A029 Root cold Pinus... 127 9e-028
gb|DR024397.1|DR024397 STRS1_64_E05.g1_A034 Shoot tip pitch... 127 9e-028
gb|DR118966.1|DR118966 RTMG1_20_G05.b1_A029 Roots minus mag... 127 9e-028
gb|DR181306.1|DR181306 RTMNUT1_38_C05.b2_A029 Roots minus m... 127 9e-028
gb|DR386604.1|DR386604 RTHG1_16_G02.b1_A029 Roots plus adde... 127 9e-028
gb|BI077216.1|BI077216 NXPV_094_D05_F NXPV (Nsf Xylem Plani... 125 3e-027
gb|DR742339.1|DR742339 RTCU1_3_H03.b1_A029 Roots plus added... 125 3e-027
gb|CF666372.1|CF666372 RTCNT1_22_G04.g1_A029 Root control P... 123 1e-026
gb|BX681530.1|BX681530 BX681530 RS Pinus pinaster cDNA clon... 123 1e-026
gb|DR011471.1|DR011471 HEAT1_6_A01.b1_A029 Root at 37 C for... 123 1e-026
gb|DR386406.1|DR386406 RTHG1_15_B01.b1_A029 Roots plus adde... 123 1e-026
gb|AW290470.1|AW290470 NXNV027C08F Nsf Xylem Normal wood Ve... 121 5e-026
gb|BX253993.1|BX253993 BX253993 Pinus pinaster differenciat... 121 5e-026
gb|BQ699796.1|BQ699796 NXRV129_D11_F NXRV (Nsf Xylem Root w... 121 5e-026
gb|CD027130.1|CD027130 NXNV027C08 Nsf Xylem Normal wood Ver... 121 5e-026
gb|BX680301.1|BX680301 BX680301 RS Pinus pinaster cDNA clon... 121 5e-026
gb|DR025373.1|DR025373 STRS1_71_F04.b1_A034 Shoot tip pitch... 121 5e-026
gb|DR092653.1|DR092653 STRR1_2_G02.g1_A033 Stem Response Re... 121 5e-026
gb|BG039464.1|BG039464 NXSI_099_C09_F NXSI (Nsf Xylem Side ... 119 2e-025
gb|AW042590.1|AW042590 ST23F12 Pine TriplEx shoot tip libra... 117 8e-025
gb|CR354724.1|CR354724 CR354724 Pinus pinaster differenciat... 115 3e-024
gb|CO165516.1|CO165516 FLD1_55_C02.b1_A029 Root flooded Pin... 115 3e-024
gb|DR015197.1|DR015197 STRS1_2_C01.b1_A034 Shoot tip pitch ... 115 3e-024
gb|AA739996.1|AA739996 761 PtIFG2 Pinus taeda cDNA clone 92... 113 1e-023
gb|AW289846.1|AW289846 NXNV006D04F Nsf Xylem Normal wood Ve... 111 5e-023
gb|CD028386.1|CD028386 NXNV006D04 Nsf Xylem Normal wood Ver... 111 5e-023
gb|CF666301.1|CF666301 RTCNT1_22_G04.b1_A029 Root control P... 109 2e-022
gb|CR393711.1|CR393711 CR393711 RN Pinus pinaster cDNA clon... 109 2e-022
gb|CO166075.1|CO166075 FLD1_59_D07.b1_A029 Root flooded Pin... 109 2e-022
gb|DR011547.1|DR011547 HEAT1_6_A01.g1_A029 Root at 37 C for... 109 2e-022
gb|DR056753.1|DR056753 RTCA1_32_G05.b1_A029 Roots minus cal... 109 2e-022
gb|DR095884.1|DR095884 STRR1_24_F10.b1_A033 Stem Response R... 109 2e-022
gb|DR179076.1|DR179076 RTMNUT1_15_G07.g1_A029 Roots minus m... 109 2e-022
gb|AA556378.1|AA556378 233 Loblolly pine C Pinus taeda cDNA... 107 8e-022
gb|BE209137.1|BE209137 NXNV_164_D02_F Nsf Xylem Normal wood... 107 8e-022
gb|BF610230.1|BF610230 NXSI_056_F03_F NXSI (Nsf Xylem Side ... 107 8e-022
gb|BF010822.1|BF010822 NXCI_095_C07_F NXCI (Nsf Xylem Compr... 105 3e-021
gb|AA556376.1|AA556376 231 Loblolly pine C Pinus taeda cDNA... 103 1e-020
gb|BQ655462.1|BQ655462 NXRV094_H06_F NXRV (Nsf Xylem Root w... 101 5e-020
gb|CF671646.1|CF671646 RTCNT1_58_H07.b1_A029 Root control P... 101 5e-020
gb|CV034101.1|CV034101 RTNACL1_38_D12.g1_A029 Roots plus ad... 101 5e-020
gb|DR078009.1|DR078009 RTFEPL1_1_H02.b1_A029 Roots plus add... 101 5e-020
gb|AI919774.1|AI919774 1318 Pine Lambda Zap Xylem library P... 100 2e-019
gb|CF475132.1|CF475132 RTWW2_14_A08.b1_A021 Well-watered lo... 100 2e-019
gb|BE657073.1|BE657073 NXCI_042_A12_F NXCI (Nsf Xylem Compr... 98 8e-019
gb|CF389404.1|CF389404 RTDR2_7_A10.b1_A021 Loblolly pine ro... 98 8e-019
gb|CF390970.1|CF390970 RTDR3_3_H04.b1_A022 Loblolly pine ro... 98 8e-019
gb|CO174271.1|CO174271 NDL1_42_H05.g1_A029 Needles control ... 98 8e-019
gb|CX648327.1|CX648327 COLD1_28_A04.b1_A029 Root cold Pinus... 98 8e-019
gb|BM428305.1|BM428305 NXRV_012_B07_F NXRV (Nsf Xylem Root ... 94 1e-017
gb|CD021503.1|CD021503 NXNV_146_C04_F Nsf Xylem Normal wood... 94 1e-017
gb|DR011079.1|DR011079 HEAT1_3_F10.b1_A029 Root at 37 C for... 94 1e-017
gb|BE662484.1|BE662484 ST86/ST86E03 Pine TriplEx shoot tip ... 92 5e-017
gb|BX252144.1|BX252144 BX252144 Pinus pinaster differenciat... 92 5e-017
gb|BX255090.1|BX255090 BX255090 Pinus pinaster differenciat... 92 5e-017
gb|BQ197740.1|BQ197740 NXLV115_D04_F NXLV (Nsf Xylem Late w... 92 5e-017
gb|BQ702464.1|BQ702464 NXSI_128_H11_F NXSI (Nsf Xylem Side ... 92 5e-017
gb|CR392578.1|CR392578 CR392578 RN Pinus pinaster cDNA clon... 92 5e-017
gb|CX714101.1|CX714101 RTPQ1_17_F01.g1_A032 Roots treated w... 92 5e-017
gb|DR047771.1|DR047771 RTBOR1_3_A03.g1_A029 Roots plus adde... 90 2e-016
gb|CX649989.1|CX649989 COLD1_42_F11.g1_A029 Root cold Pinus... 88 8e-016
gb|CX713473.1|CX713473 RTPQ1_9_D06.g1_A032 Roots treated wi... 88 8e-016
gb|DR021929.1|DR021929 STRS1_47_F09.g1_A034 Shoot tip pitch... 88 8e-016
gb|DR081571.1|DR081571 RTFEPL1_30_D09.g1_A029 Roots plus ad... 88 8e-016
gb|AF461687.1| Pinus pinaster putative ubiquitin mRNA, part... 88 8e-016
gb|AW010531.1|AW010531 ST07H04 Pine TriplEx shoot tip libra... 86 3e-015
gb|DN628405.1|DN628405 EST979221 Subtracted pine embryo lib... 86 3e-015
gb|AL750419.1|AL750419 AL750419 RN Pinus pinaster cDNA clon... 84 1e-014
gb|AL751065.1|AL751065 AL751065 RS Pinus pinaster cDNA clon... 84 1e-014
gb|BX255770.1|BX255770 BX255770 Pinus pinaster differenciat... 84 1e-014
gb|BQ702550.1|BQ702550 NXSI_129_H05_F NXSI (Nsf Xylem Side ... 84 1e-014
gb|CF389418.1|CF389418 RTDR2_7_A02.g1_A021 Loblolly pine ro... 84 1e-014
gb|CF389442.1|CF389442 RTDR2_7_A04.g1_A021 Loblolly pine ro... 84 1e-014
gb|CF390285.1|CF390285 RTDR2_18_G01.g1_A021 Loblolly pine r... 84 1e-014
gb|CF390772.1|CF390772 RTDR2_17_H02.g1_A021 Loblolly pine r... 84 1e-014
gb|CF391576.1|CF391576 RTDR3_9_H12.g1_A022 Loblolly pine ro... 84 1e-014
gb|CF392104.1|CF392104 RTDR3_12_F04.g1_A022 Loblolly pine r... 84 1e-014
gb|CF399368.1|CF399368 RTDS3_28_G05.b1_A022 Drought-stresse... 84 1e-014
gb|CF399441.1|CF399441 RTDS3_28_G05.g1_A022 Drought-stresse... 84 1e-014
gb|CF477054.1|CF477054 RTWW3_5_H10.g1_A022 Well-watered lob... 84 1e-014
gb|CF478380.1|CF478380 RTWW3_18_D01.g1_A022 Well-watered lo... 84 1e-014
gb|CF667409.1|CF667409 RTCNT1_30_C04.b1_A029 Root control P... 84 1e-014
gb|CF667479.1|CF667479 RTCNT1_30_C04.g1_A029 Root control P... 84 1e-014
gb|CF668463.1|CF668463 RTCNT1_36_D06.g1_A029 Root control P... 84 1e-014
gb|BX680186.1|BX680186 BX680186 RS Pinus pinaster cDNA clon... 84 1e-014
gb|CO163119.1|CO163119 FLD1_39_C06.g1_A029 Root flooded Pin... 84 1e-014
gb|CO364201.1|CO364201 RTK1_14_G06.b1_A029 Roots minus pota... 84 1e-014
gb|CO364836.1|CO364836 RTK1_22_C08.b1_A029 Roots minus pota... 84 1e-014
gb|CO368499.1|CO368499 RTK1_41_B01.b1_A029 Roots minus pota... 84 1e-014
gb|CO368574.1|CO368574 RTK1_41_B01.g1_A029 Roots minus pota... 84 1e-014
gb|CO370248.1|CO370248 RTK1_66_D01.g1_A029 Roots minus pota... 84 1e-014
gb|CV033491.1|CV033491 RTNACL1_34_G10.g1_A029 Roots plus ad... 84 1e-014
gb|CX649913.1|CX649913 COLD1_42_F11.b1_A029 Root cold Pinus... 84 1e-014
gb|CX650559.1|CX650559 COLD1_46_B11.g1_A029 Root cold Pinus... 84 1e-014
gb|CX650717.1|CX650717 COLD1_47_D09.g1_A029 Root cold Pinus... 84 1e-014
gb|CX651238.1|CX651238 COLD1_51_C06.b1_A029 Root cold Pinus... 84 1e-014
gb|CX651320.1|CX651320 COLD1_51_C06.g1_A029 Root cold Pinus... 84 1e-014
gb|CX651538.1|CX651538 COLD1_53_C05.b1_A029 Root cold Pinus... 84 1e-014
gb|CX651602.1|CX651602 COLD1_53_C01.g1_A029 Root cold Pinus... 84 1e-014
gb|CX651606.1|CX651606 COLD1_53_C05.g1_A029 Root cold Pinus... 84 1e-014
gb|CX652286.1|CX652286 COLD1_58_D09.b1_A029 Root cold Pinus... 84 1e-014
gb|CX652373.1|CX652373 COLD1_58_D09.g1_A029 Root cold Pinus... 84 1e-014
gb|CX652503.1|CX652503 COLD1_59_B09.g1_A029 Root cold Pinus... 84 1e-014
gb|CX652683.1|CX652683 COLD1_60_G01.g1_A029 Root cold Pinus... 84 1e-014
gb|DR019013.1|DR019013 STRS1_27_F12.b1_A034 Shoot tip pitch... 84 1e-014
gb|DR019097.1|DR019097 STRS1_27_F12.g1_A034 Shoot tip pitch... 84 1e-014
gb|DR051159.1|DR051159 RTBOR1_28_C05.b1_A029 Roots plus add... 84 1e-014
gb|DR056622.1|DR056622 RTCA1_31_B05.g1_A029 Roots minus cal... 84 1e-014
gb|DR058576.1|DR058576 RTNIT1_12_D11.g1_A029 Roots minus ni... 84 1e-014
gb|DR059846.1|DR059846 RTNIT1_20_D08.b1_A029 Roots minus ni... 84 1e-014
gb|DR059932.1|DR059932 RTNIT1_20_D08.g1_A029 Roots minus ni... 84 1e-014
gb|DR060824.1|DR060824 RTNIT1_30_F01.b1_A029 Roots minus ni... 84 1e-014
gb|DR069123.1|DR069123 RTDK1_5_C04.b1_A029 Roots, dark Pinu... 84 1e-014
gb|DR069199.1|DR069199 RTDK1_5_C04.g1_A029 Roots, dark Pinu... 84 1e-014
gb|DR078968.1|DR078968 RTFEPL1_8_D04.b1_A029 Roots plus add... 84 1e-014
gb|DR079046.1|DR079046 RTFEPL1_8_D04.g1_A029 Roots plus add... 84 1e-014
gb|DR080951.1|DR080951 RTFEPL1_26_G12.b1_A029 Roots plus ad... 84 1e-014
gb|DR081027.1|DR081027 RTFEPL1_26_G12.g1_A029 Roots plus ad... 84 1e-014
gb|DR089048.1|DR089048 RTAL1_6_F02.b1_A029 Roots plus added... 84 1e-014
gb|DR089133.1|DR089133 RTAL1_6_F02.g1_A029 Roots plus added... 84 1e-014
gb|DR090439.1|DR090439 RTAL1_15_C01.b1_A029 Roots plus adde... 84 1e-014
gb|DR100975.1|DR100975 STRR1_69_D11.g1_A033 Stem Response R... 84 1e-014
gb|DR110544.1|DR110544 RTS1_11_B07.g1_A029 Roots minus sulf... 84 1e-014
gb|DR111572.1|DR111572 RTS1_18_F09.g1_A029 Roots minus sulf... 84 1e-014
gb|DR112792.1|DR112792 RTS1_30_D05.g1_A029 Roots minus sulf... 84 1e-014
gb|DR169301.1|DR169301 RTPHOS1_31_A07.g1_A029 Roots minus p... 84 1e-014
gb|DR181367.1|DR181367 RTMNUT1_38_A12.g2_A029 Roots minus m... 84 1e-014
gb|DR682817.1|DR682817 EST1072892 Normalized pine embryo li... 84 1e-014
gb|DR743602.1|DR743602 RTCU1_17_A09.b1_A029 Roots plus adde... 84 1e-014
gb|CF666293.1|CF666293 RTCNT1_22_F05.b1_A029 Root control P... 82 5e-014
gb|DR014493.1|DR014493 HEAT1_49_G07.g1_A029 Root at 37 C fo... 82 5e-014
gb|DR092044.1|DR092044 RTAL1_25_H12.g1_A029 Roots plus adde... 82 5e-014
gb|AJ541801.1|AJ541801 AJ541801 Pinus pinaster differentiat... 80 2e-013
gb|BE049798.1|BE049798 NXNV_144_C11_F Nsf Xylem Normal wood... 80 2e-013
gb|DR060902.1|DR060902 RTNIT1_30_F01.g1_A029 Roots minus ni... 80 2e-013
gb|AW289886.1|AW289886 NXNV007E08F Nsf Xylem Normal wood Ve... 78 7e-013
gb|AW289924.1|AW289924 NXNV007D08F Nsf Xylem Normal wood Ve... 78 7e-013
gb|AW289980.1|AW289980 NXNV009A06F Nsf Xylem Normal wood Ve... 78 7e-013
gb|CD026548.1|CD026548 NXNV007D08 Nsf Xylem Normal wood Ver... 78 7e-013
gb|CD026559.1|CD026559 NXNV007E08 Nsf Xylem Normal wood Ver... 78 7e-013
gb|CD026639.1|CD026639 NXNV009A06 Nsf Xylem Normal wood Ver... 78 7e-013
gb|CF389006.1|CF389006 RTDR2_13_D05.b1_A021 Loblolly pine r... 78 7e-013
gb|CF389392.1|CF389392 RTDR2_7_A02.b1_A021 Loblolly pine ro... 78 7e-013
gb|CF478323.1|CF478323 RTWW3_18_D01.b1_A022 Well-watered lo... 78 7e-013
gb|CF668380.1|CF668380 RTCNT1_36_D06.b1_A029 Root control P... 78 7e-013
gb|CX647028.1|CX647028 COLD1_13_B06.b1_A029 Root cold Pinus... 78 7e-013
gb|CX647178.1|CX647178 COLD1_14_D03.b1_A029 Root cold Pinus... 78 7e-013
gb|CX649005.1|CX649005 COLD1_32_G09.b1_A029 Root cold Pinus... 78 7e-013
gb|CX649079.1|CX649079 COLD1_32_G09.g1_A029 Root cold Pinus... 78 7e-013
gb|CX650487.1|CX650487 COLD1_46_B11.b1_A029 Root cold Pinus... 78 7e-013
gb|CX650649.1|CX650649 COLD1_47_D09.b1_A029 Root cold Pinus... 78 7e-013
gb|CX651750.1|CX651750 COLD1_54_C01.g1_A029 Root cold Pinus... 78 7e-013
gb|DR047569.1|DR047569 RTBOR1_2_A11.b1_A029 Roots plus adde... 78 7e-013
gb|DR055327.1|DR055327 RTCA1_23_A09.b1_A029 Roots minus cal... 78 7e-013
gb|DR110458.1|DR110458 RTS1_11_B07.b1_A029 Roots minus sulf... 78 7e-013
gb|DR169234.1|DR169234 RTPHOS1_31_A07.b1_A029 Roots minus p... 78 7e-013
gb|AI813090.1|AI813090 20F10 Pine Lambda Zap Xylem library ... 76 3e-012
gb|AW056447.1|AW056447 ST52A04 Pine TriplEx shoot tip libra... 76 3e-012
gb|AW056627.1|AW056627 ST53G10 Pine TriplEx shoot tip libra... 76 3e-012
gb|AW754903.1|AW754903 PC08B09 Pine TriplEx pollen cone lib... 76 3e-012
gb|AW887977.1|AW887977 NXNV_105_A08_F Nsf Xylem Normal wood... 76 3e-012
gb|BE458100.1|BE458100 NXCI_008_B09_F NXCI (Nsf Xylem Compr... 76 3e-012
gb|BG039550.1|BG039550 NXSI_100_C11_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BG040481.1|BG040481 NXSI_108_F11_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BG317532.1|BG317532 NXPV_002_H06_F NXPV (Nsf Xylem Plani... 76 3e-012
gb|BG318199.1|BG318199 NXPV_011_F11_F NXPV (Nsf Xylem Plani... 76 3e-012
gb|BG485797.1|BG485797 NXPV_038_H10_F NXPV (Nsf Xylem Plani... 76 3e-012
gb|BM903032.1|BM903032 NXLV_078_D02_F NXLV (Nsf Xylem Late ... 76 3e-012
gb|BQ198064.1|BQ198064 NXLV125_A10_F NXLV (Nsf Xylem Late w... 76 3e-012
gb|BQ291380.1|BQ291380 NXRV053_C10_F NXRV (Nsf Xylem Root w... 76 3e-012
gb|BQ697966.1|BQ697966 NXPV_063_A08_F NXPV (Nsf Xylem Plani... 76 3e-012
gb|CF397057.1|CF397057 RTDS2_26_D11.b1_A021 Drought-stresse... 76 3e-012
gb|CF397127.1|CF397127 RTDS2_26_D11.g1_A021 Drought-stresse... 76 3e-012
gb|CF474880.1|CF474880 RTWW2_8_B10.g1_A021 Well-watered lob... 76 3e-012
gb|CF477964.1|CF477964 RTWW3_17_G08.b1_A022 Well-watered lo... 76 3e-012
gb|CF667462.1|CF667462 RTCNT1_30_A08.g1_A029 Root control P... 76 3e-012
gb|CF668102.1|CF668102 RTCNT1_34_H10.b1_A029 Root control P... 76 3e-012
gb|CF668184.1|CF668184 RTCNT1_34_H10.g1_A029 Root control P... 76 3e-012
gb|CF669722.1|CF669722 RTCNT1_45_D11.g1_A029 Root control P... 76 3e-012
gb|CF671839.1|CF671839 RTCNT1_59_D03.g1_A029 Root control P... 76 3e-012
gb|CO160892.1|CO160892 FLD1_25_G03.b1_A029 Root flooded Pin... 76 3e-012
gb|CO160974.1|CO160974 FLD1_25_G03.g1_A029 Root flooded Pin... 76 3e-012
gb|CO161139.1|CO161139 FLD1_26_H08.g1_A029 Root flooded Pin... 76 3e-012
gb|CO164917.1|CO164917 FLD1_51_D02.b1_A029 Root flooded Pin... 76 3e-012
gb|CO164990.1|CO164990 FLD1_51_D02.g1_A029 Root flooded Pin... 76 3e-012
gb|CO166393.1|CO166393 FLD1_61_D11.g1_A029 Root flooded Pin... 76 3e-012
gb|CO172373.1|CO172373 NDL1_29_G07.b1_A029 Needles control ... 76 3e-012
gb|CO172454.1|CO172454 NDL1_29_G07.g1_A029 Needles control ... 76 3e-012
gb|CO364515.1|CO364515 RTK1_16_D10.b1_A029 Roots minus pota... 76 3e-012
gb|CO364595.1|CO364595 RTK1_16_D10.g1_A029 Roots minus pota... 76 3e-012
gb|CO367565.1|CO367565 RTK1_35_D03.b1_A029 Roots minus pota... 76 3e-012
gb|CO367642.1|CO367642 RTK1_35_D03.g1_A029 Roots minus pota... 76 3e-012
gb|CV032796.1|CV032796 RTNACL1_18_H10.b1_A029 Roots plus ad... 76 3e-012
gb|CV032885.1|CV032885 RTNACL1_18_H10.g1_A029 Roots plus ad... 76 3e-012
gb|CV036071.1|CV036071 RTNACL1_44_B03.g1_A029 Roots plus ad... 76 3e-012
gb|CV036288.1|CV036288 RTNACL1_58_C09.b1_A029 Roots plus ad... 76 3e-012
gb|CV036343.1|CV036343 RTNACL1_58_C09.g1_A029 Roots plus ad... 76 3e-012
gb|CX645901.1|CX645901 COLD1_6_B01.b1_A029 Root cold Pinus ... 76 3e-012
gb|CX645975.1|CX645975 COLD1_6_B01.g1_A029 Root cold Pinus ... 76 3e-012
gb|CX647151.1|CX647151 COLD1_14_A02.b1_A029 Root cold Pinus... 76 3e-012
gb|CX647804.1|CX647804 COLD1_20_G01.b1_A029 Root cold Pinus... 76 3e-012
gb|CX647845.1|CX647845 COLD1_20_G01.g1_A029 Root cold Pinus... 76 3e-012
gb|CX713183.1|CX713183 RTPQ1_7_B06.g1_A032 Roots treated wi... 76 3e-012
gb|CX713801.1|CX713801 RTPQ1_13_F08.b1_A032 Roots treated w... 76 3e-012
gb|CX713994.1|CX713994 RTPQ1_16_E07.b1_A032 Roots treated w... 76 3e-012
gb|CX715365.1|CX715365 RTPQ1_33_E04.g1_A032 Roots treated w... 76 3e-012
gb|DN627359.1|DN627359 EST978175 Subtracted pine embryo lib... 76 3e-012
gb|DN628619.1|DN628619 EST979435 Subtracted pine embryo lib... 76 3e-012
gb|DN629756.1|DN629756 EST980572 Subtracted pine embryo lib... 76 3e-012
gb|DN630445.1|DN630445 EST981261 Subtracted pine embryo lib... 76 3e-012
gb|DN631513.1|DN631513 EST982329 Subtracted pine embryo lib... 76 3e-012
gb|DN633992.1|DN633992 EST984808 Subtracted pine embryo lib... 76 3e-012
gb|DR013476.1|DR013476 HEAT1_19_C03.g1_A029 Root at 37 C fo... 76 3e-012
gb|DR021336.1|DR021336 STRS1_44_A06.b1_A034 Shoot tip pitch... 76 3e-012
gb|DR021403.1|DR021403 STRS1_44_A06.g1_A034 Shoot tip pitch... 76 3e-012
gb|DR054752.1|DR054752 RTCA1_19_H03.b1_A029 Roots minus cal... 76 3e-012
gb|DR054838.1|DR054838 RTCA1_19_H03.g1_A029 Roots minus cal... 76 3e-012
gb|DR056869.1|DR056869 RTNIT1_1_C06.b1_A029 Roots minus nit... 76 3e-012
gb|DR058083.1|DR058083 RTNIT1_9_D02.g1_A029 Roots minus nit... 76 3e-012
gb|DR058433.1|DR058433 RTNIT1_11_F06.g1_A029 Roots minus ni... 76 3e-012
gb|DR071299.1|DR071299 RTDK1_19_B01.b1_A029 Roots, dark Pin... 76 3e-012
gb|DR071379.1|DR071379 RTDK1_19_B01.g1_A029 Roots, dark Pin... 76 3e-012
gb|DR080632.1|DR080632 RTFEPL1_24_C10.b1_A029 Roots plus ad... 76 3e-012
gb|DR080702.1|DR080702 RTFEPL1_24_C10.g1_A029 Roots plus ad... 76 3e-012
gb|DR080914.1|DR080914 RTFEPL1_26_D01.b1_A029 Roots plus ad... 76 3e-012
gb|DR080989.1|DR080989 RTFEPL1_26_D01.g1_A029 Roots plus ad... 76 3e-012
gb|DR081149.1|DR081149 RTFEPL1_27_F06.g1_A029 Roots plus ad... 76 3e-012
gb|DR088703.1|DR088703 RTAL1_3_H10.g1_A029 Roots plus added... 76 3e-012
gb|DR089621.1|DR089621 RTAL1_9_G11.g1_A029 Roots plus added... 76 3e-012
gb|DR094513.1|DR094513 STRR1_15_C03.b1_A033 Stem Response R... 76 3e-012
gb|DR094594.1|DR094594 STRR1_15_C03.g1_A033 Stem Response R... 76 3e-012
gb|DR098061.1|DR098061 STRR1_38_H03.g1_A033 Stem Response R... 76 3e-012
gb|DR101707.1|DR101707 STRR1_75_E10.b1_A033 Stem Response R... 76 3e-012
gb|DR101773.1|DR101773 STRR1_75_E10.g1_A033 Stem Response R... 76 3e-012
gb|DR102260.1|DR102260 STRR1_79_E06.g1_A033 Stem Response R... 76 3e-012
gb|DR119669.1|DR119669 RTMG1_24_E08.g1_A029 Roots minus mag... 76 3e-012
gb|DR161704.1|DR161704 RTFE1_13_A02.g1_A029 Roots minus iro... 76 3e-012
gb|DR385677.1|DR385677 RTHG1_10_D09.b1_A029 Roots plus adde... 76 3e-012
gb|DR385754.1|DR385754 RTHG1_10_D09.g1_A029 Roots plus adde... 76 3e-012
gb|AL751252.1|AL751252 AL751252 RS Pinus pinaster cDNA clon... 74 1e-011
gb|BE241376.1|BE241376 NXNV_187_D12_F Nsf Xylem Normal wood... 74 1e-011
gb|BM133242.1|BM133242 NXLV_003_C06_F NXLV (Nsf Xylem Late ... 72 4e-011
gb|CF670718.1|CF670718 RTCNT1_52_C04.b1_A029 Root control P... 72 4e-011
gb|BX680520.1|BX680520 BX680520 RS Pinus pinaster cDNA clon... 72 4e-011
gb|BE582109.1|BE582109 NXCI_025_F05_F NXCI (Nsf Xylem Compr... 70 2e-010
gb|BM133806.1|BM133806 NXLV_012_E06_F NXLV (Nsf Xylem Late ... 70 2e-010
gb|BM133807.1|BM133807 NXLV_012_E07_F NXLV (Nsf Xylem Late ... 70 2e-010
gb|BM902683.1|BM902683 NXLV_057_G03_F NXLV (Nsf Xylem Late ... 70 2e-010
gb|BQ697158.1|BQ697158 NXPV_050_C02_F NXPV (Nsf Xylem Plani... 70 2e-010
gb|BQ702310.1|BQ702310 NXSI_127_C05_F NXSI (Nsf Xylem Side ... 70 2e-010
gb|CD024195.1|CD024195 NXRV_035_G02_F NXRV (Nsf Xylem Root ... 70 2e-010
gb|CR393439.1|CR393439 CR393439 RN Pinus pinaster cDNA clon... 70 2e-010
gb|DR090507.1|DR090507 RTAL1_15_C01.g1_A029 Roots plus adde... 70 2e-010
gb|DR163690.1|DR163690 RTFE1_44_H04.b1_A029 Roots minus iro... 70 2e-010
gb|DR163779.1|DR163779 RTFE1_44_H04.g1_A029 Roots minus iro... 70 2e-010
gb|DR166452.1|DR166452 RTPHOS1_12_C03.b2_A029 Roots minus p... 70 2e-010
gb|DT631173.1|DT631173 EST1146104 Normalized pine embryo li... 70 2e-010
gb|AI919851.1|AI919851 1395 Pine Lambda Zap Xylem library P... 68 7e-010
gb|AW011064.1|AW011064 ST16C07 Pine TriplEx shoot tip libra... 68 7e-010
gb|BQ655301.1|BQ655301 NXRV092_F08_F NXRV (Nsf Xylem Root w... 68 7e-010
gb|DN615039.1|DN615039 EST968089 Subtracted pine embryo lib... 68 7e-010
gb|DN631382.1|DN631382 EST982198 Subtracted pine embryo lib... 68 7e-010
gb|DR072150.1|DR072150 RTDK1_24_H07.b1_A029 Roots, dark Pin... 68 7e-010
gb|AW290706.1|AW290706 NXNV046A01F Nsf Xylem Normal wood Ve... 66 3e-009
gb|BX253599.1|BX253599 BX253599 Pinus pinaster differenciat... 66 3e-009
gb|AW985210.1|AW985210 NXNV_132_E04_F Nsf Xylem Normal wood... 66 3e-009
gb|BF778601.1|BF778601 NXSI_088_E10_F NXSI (Nsf Xylem Side ... 66 3e-009
gb|BM134239.1|BM134239 NXLV_018_D12_F NXLV (Nsf Xylem Late ... 66 3e-009
gb|BM367287.1|BM367287 NXLV_047_B12_F NXLV (Nsf Xylem Late ... 66 3e-009
gb|BQ197318.1|BQ197318 NXLV112_D09_F NXLV (Nsf Xylem Late w... 66 3e-009
gb|BQ197348.1|BQ197348 NXLV112_G11_F NXLV (Nsf Xylem Late w... 66 3e-009
gb|CD027365.1|CD027365 NXNV046A01 Nsf Xylem Normal wood Ver... 66 3e-009
gb|CF472353.1|CF472353 RTDS1_9_A05.b1_A015 Drought-stressed... 66 3e-009
gb|CF472445.1|CF472445 RTDS1_9_A05.g1_A015 Drought-stressed... 66 3e-009
gb|CF472968.1|CF472968 RTDS1_1_F08.b1_A015 Drought-stressed... 66 3e-009
gb|CF473088.1|CF473088 RTDS1_1_F08.g1_A015 Drought-stressed... 66 3e-009
gb|CF473148.1|CF473148 RTWW2_1_F02.b1_A021 Well-watered lob... 66 3e-009
gb|CF473306.1|CF473306 RTWW2_1_F02.g1_A021 Well-watered lob... 66 3e-009
gb|CF475863.1|CF475863 RTWW2_15_C03.g1_A021 Well-watered lo... 66 3e-009
gb|CO175240.1|CO175240 NDL1_53_A07.g1_A029 Needles control ... 66 3e-009
gb|CO198896.1|CO198896 GEO1_17_H03.b1_A029 Root gravitropis... 66 3e-009
gb|CO198976.1|CO198976 GEO1_17_H03.g1_A029 Root gravitropis... 66 3e-009
gb|CO369004.1|CO369004 RTK1_44_G06.b1_A029 Roots minus pota... 66 3e-009
gb|CO369082.1|CO369082 RTK1_44_G06.g1_A029 Roots minus pota... 66 3e-009
gb|CV032733.1|CV032733 RTNACL1_18_B05.b1_A029 Roots plus ad... 66 3e-009
gb|CV032813.1|CV032813 RTNACL1_18_B05.g1_A029 Roots plus ad... 66 3e-009
gb|CX647257.1|CX647257 COLD1_14_F02.g1_A029 Root cold Pinus... 66 3e-009
gb|CX648525.1|CX648525 COLD1_29_E11.b1_A029 Root cold Pinus... 66 3e-009
gb|CX648604.1|CX648604 COLD1_29_E11.g1_A029 Root cold Pinus... 66 3e-009
gb|CX651481.1|CX651481 COLD1_52_E06.g1_A029 Root cold Pinus... 66 3e-009
gb|CX714225.1|CX714225 RTPQ1_19_A07.g1_A032 Roots treated w... 66 3e-009
gb|DN612195.1|DN612195 EST965245 Subtracted pine embryo lib... 66 3e-009
gb|DN626542.1|DN626542 EST977358 Subtracted pine embryo lib... 66 3e-009
gb|DN628233.1|DN628233 EST979049 Subtracted pine embryo lib... 66 3e-009
gb|DN629219.1|DN629219 EST980035 Subtracted pine embryo lib... 66 3e-009
gb|DN629698.1|DN629698 EST980514 Subtracted pine embryo lib... 66 3e-009
gb|DN630193.1|DN630193 EST981009 Subtracted pine embryo lib... 66 3e-009
gb|DN632093.1|DN632093 EST982909 Subtracted pine embryo lib... 66 3e-009
gb|DN632358.1|DN632358 EST983174 Subtracted pine embryo lib... 66 3e-009
gb|DN633291.1|DN633291 EST984107 Subtracted pine embryo lib... 66 3e-009
gb|DN633566.1|DN633566 EST984382 Subtracted pine embryo lib... 66 3e-009
gb|DN633994.1|DN633994 EST984810 Subtracted pine embryo lib... 66 3e-009
gb|DR021539.1|DR021539 STRS1_45_H01.b1_A034 Shoot tip pitch... 66 3e-009
gb|DR021617.1|DR021617 STRS1_45_H01.g1_A034 Shoot tip pitch... 66 3e-009
gb|DR022486.1|DR022486 STRS1_51_H11.b1_A034 Shoot tip pitch... 66 3e-009
gb|DR050400.1|DR050400 RTBOR1_23_F03.b1_A029 Roots plus add... 66 3e-009
gb|DR050474.1|DR050474 RTBOR1_23_F03.g1_A029 Roots plus add... 66 3e-009
gb|DR053654.1|DR053654 RTCA1_12_B08.g1_A029 Roots minus cal... 66 3e-009
gb|DR060209.1|DR060209 RTNIT1_26_H12.b1_A029 Roots minus ni... 66 3e-009
gb|DR060289.1|DR060289 RTNIT1_26_H12.g1_A029 Roots minus ni... 66 3e-009
gb|DR109983.1|DR109983 RTS1_1_D10.b1_A029 Roots minus sulfu... 66 3e-009
gb|DR117991.1|DR117991 RTMG1_10_B02.g1_A029 Roots minus mag... 66 3e-009
gb|DR160806.1|DR160806 RTFE1_8_E01.b1_A029 Roots minus iron... 66 3e-009
gb|DR160898.1|DR160898 RTFE1_8_E01.g1_A029 Roots minus iron... 66 3e-009
gb|DR178516.1|DR178516 RTMNUT1_12_G01.b1_A029 Roots minus m... 66 3e-009
gb|DR178604.1|DR178604 RTMNUT1_12_G01.g1_A029 Roots minus m... 66 3e-009
gb|DR182137.1|DR182137 RTMNUT1_43_D02.b1_A029 Roots minus m... 66 3e-009
gb|DR182218.1|DR182218 RTMNUT1_43_D02.g1_A029 Roots minus m... 66 3e-009
gb|DR694099.1|DR694099 EST1084189 Normalized pine embryo li... 66 3e-009
>gb|BX249556.1|BX249556 BX249556 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025D09 similar to UBIQUITIN CONJUGATING
ENZYME, mRNA sequence
Length = 672
Score = 198 bits (100), Expect = 3e-049
Identities = 361/448 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| |||||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 85 atggcgtctaagaggattcttaaggagctcaaggatttgcagaaggatcccccgacatct 144
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 145 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 204
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || |||| |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 205 cctgatagtccatatgcagggggtgtattcgtggttactattcattttcctcctgattat 264
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 265 ccatttaagcctccaaaggttgcattccgcactaaggttttccacccaaatataaacagc 324
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 325 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 384
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| || |||
Sbjct: 385 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccactcgtc 444
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtccaccgcacgctcc 559
||||||||||||||||||||||||| |||| | ||||||| ||||| || ||| | |
Sbjct: 445 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtcaactgcaagaaac 504
Query: 560 tggacacagaagtatgccatgggctaga 587
||||| || |||||||| ||||| ||||
Sbjct: 505 tggacccaaaagtatgcaatgggttaga 532
>gb|BX250256.1|BX250256 BX250256 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP034D05 similar to UBIQUITIN CONJUGATING
ENZYME, mRNA sequence
Length = 660
Score = 198 bits (100), Expect = 3e-049
Identities = 361/448 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| |||||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 79 atggcgtctaagaggattcttaaggagctcaaggatttgcagaaggatcccccgacatct 138
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 139 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 198
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || |||| |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 199 cctgatagtccatatgcagggggtgtattcgtggttactattcattttcctcctgattat 258
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 259 ccatttaagcctccaaaggttgcattccgcactaaggttttccacccaaatataaacagc 318
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 319 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 378
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| || |||
Sbjct: 379 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccactcgtc 438
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtccaccgcacgctcc 559
||||||||||||||||||||||||| |||| | ||||||| ||||| || ||| | |
Sbjct: 439 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtcaactgcaagaaac 498
Query: 560 tggacacagaagtatgccatgggctaga 587
||||| || |||||||| ||||| ||||
Sbjct: 499 tggacccaaaagtatgcaatgggttaga 526
>gb|BX252316.1|BX252316 BX252316 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062G08 similar to UBIQUITIN CONJUGATING
ENZYME, mRNA sequence
Length = 738
Score = 198 bits (100), Expect = 3e-049
Identities = 361/448 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| |||||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 90 atggcgtctaagaggattcttaaggagctcaaggatttgcagaaggatcccccgacatct 149
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 150 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 209
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || |||| |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 210 cctgatagtccatatgcagggggtgtattcgtggttactattcattttcctcctgattat 269
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 270 ccatttaagcctccaaaggttgcattccgcactaaggttttccacccaaatataaacagc 329
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 330 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 389
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| || |||
Sbjct: 390 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccactcgtc 449
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtccaccgcacgctcc 559
||||||||||||||||||||||||| |||| | ||||||| ||||| || ||| | |
Sbjct: 450 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtcaactgcaagaaac 509
Query: 560 tggacacagaagtatgccatgggctaga 587
||||| || |||||||| ||||| ||||
Sbjct: 510 tggacccaaaagtatgcaatgggttaga 537
>gb|BX678421.1|BX678421 BX678421 RS Pinus pinaster cDNA clone RS08H03, mRNA sequence
Length = 616
Score = 198 bits (100), Expect = 3e-049
Identities = 361/448 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| |||||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 53 atggcgtctaagaggattcttaaggagctcaaggatttgcagaaggatcccccgacatct 112
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 113 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 172
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || |||| |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 173 cctgatagtccatatgcagggggtgtattcgtggttactattcattttcctcctgattat 232
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 233 ccatttaagcctccaaaggttgcattccgcactaaggttttccacccaaatataaacagc 292
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 293 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 352
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| || |||
Sbjct: 353 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccactcgtc 412
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtccaccgcacgctcc 559
||||||||||||||||||||||||| |||| | ||||||| ||||| || ||| | |
Sbjct: 413 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtcaactgcaagaaac 472
Query: 560 tggacacagaagtatgccatgggctaga 587
||||| || |||||||| ||||| ||||
Sbjct: 473 tggacccaaaagtatgcaatgggttaga 500
>gb|BG317975.1|BG317975 NXPV_008_A10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_008_A10 5' similar to Arabidopsis
thaliana sequence At4g27960 ubiquitin-protein ligase
UBC9 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 563
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 61 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 120
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 121 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 180
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 181 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 240
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 241 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 300
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 301 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 360
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 361 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 420
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 421 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 467
>gb|CF389667.1|CF389667 RTDR2_8_F08.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_F08_A021 5', mRNA
sequence
Length = 743
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 64 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 123
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 124 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 183
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 184 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 243
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 244 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 303
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 304 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 363
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 364 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 423
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 424 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 470
>gb|CF390778.1|CF390778 RTDR2_17_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_17_A10_A021 5', mRNA
sequence
Length = 717
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 74 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 133
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 134 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 193
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 194 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 253
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 254 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 313
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 314 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 373
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 374 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 433
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 434 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 480
>gb|CF392512.1|CF392512 RTDR3_6_H10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_6_H10_A022 5', mRNA
sequence
Length = 745
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 52 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 111
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 112 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 171
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 172 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 231
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 232 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 291
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 292 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 351
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 352 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 411
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 412 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 458
>gb|CF478088.1|CF478088 RTWW3_17_G08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_17_G08_A022 5', mRNA sequence
Length = 765
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 86 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 145
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 146 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 205
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 206 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 265
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 266 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 325
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 326 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 385
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 386 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 445
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 446 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 492
>gb|CF671726.1|CF671726 RTCNT1_58_H07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_58_H07_A029 5', mRNA sequence
Length = 762
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 172 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 231
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 232 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 291
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 292 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 351
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 352 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 411
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 412 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 471
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 472 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 531
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 532 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 578
>gb|CO174183.1|CO174183 NDL1_42_H05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_42_H05_A029 3', mRNA sequence
Length = 860
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Minus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 708 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 649
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 648 tgcagcgcaggtccagtagctgatgatatgtttcattggcaagccacgataatgggacct 589
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 588 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 529
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 528 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 469
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 468 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 409
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 408 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 349
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 348 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 302
>gb|CO197915.1|CO197915 GEO1_10_B04.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_B04_A029 3', mRNA sequence
Length = 855
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Minus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 760 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 701
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 700 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 641
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 640 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 581
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 580 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 521
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 520 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 461
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 460 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 401
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 400 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 354
>gb|CO198879.1|CO198879 GEO1_17_F05.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_17_F05_A029 3', mRNA sequence
Length = 786
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Minus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 742 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 683
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 682 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 623
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 622 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 563
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 562 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 503
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 502 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 443
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 442 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 383
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 382 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 336
>gb|CO198953.1|CO198953 GEO1_17_E11.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_17_E11_A029 5', mRNA sequence
Length = 833
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 64 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 123
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 124 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 183
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 184 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 243
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 244 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 303
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 304 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 363
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 364 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 423
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 424 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 470
>gb|CV033635.1|CV033635 RTNACL1_35_E07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_E07_A029 5', mRNA sequence
Length = 772
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 46 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 105
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 106 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 165
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 166 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 225
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 226 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 285
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 286 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 345
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 346 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 405
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 406 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 452
>gb|CV034479.1|CV034479 RTNACL1_9_E09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_9_E09_A029 3', mRNA sequence
Length = 804
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 79 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 138
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 139 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 198
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 199 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 258
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 259 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 318
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 319 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 378
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 379 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 438
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 439 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 485
>gb|CV034536.1|CV034536 RTNACL1_9_E09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_9_E09_A029 5', mRNA sequence
Length = 754
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 37 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 96
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 97 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 156
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 157 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 216
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 217 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 276
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 277 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 336
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 337 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 396
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 397 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 443
>gb|CX647187.1|CX647187 COLD1_14_E02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_14_E02_A029 3', mRNA sequence
Length = 796
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 93 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 152
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 153 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 212
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 213 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 272
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 273 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 332
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 333 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 392
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 393 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 452
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 453 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 499
>gb|CX647250.1|CX647250 COLD1_14_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_14_E02_A029 5', mRNA sequence
Length = 604
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 64 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 123
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 124 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 183
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 184 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 243
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 244 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 303
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 304 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 363
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 364 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 423
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 424 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 470
>gb|CX651736.1|CX651736 COLD1_54_A11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_54_A11_A029 5', mRNA sequence
Length = 801
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 229 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 288
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 289 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 348
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 349 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 408
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 409 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 468
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 469 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 528
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 529 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 588
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 589 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 635
>gb|CX651946.1|CX651946 COLD1_55_G12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_55_G12_A029 5', mRNA sequence
Length = 775
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 68 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 127
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 128 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 187
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 188 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 247
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 248 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 307
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 308 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 367
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 368 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 427
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 428 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 474
>gb|DN463457.1|DN463457 EST959256 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIZ09 5' end, mRNA sequence
Length = 850
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 47 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 106
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 107 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 166
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 167 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 226
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 227 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 286
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 287 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 346
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 347 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 406
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 407 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 453
>gb|DN627545.1|DN627545 EST978361 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAL68, mRNA sequence
Length = 722
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 103 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 162
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 163 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 222
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 223 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 282
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 283 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 342
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 343 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 402
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 403 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 462
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 463 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 509
>gb|DR011143.1|DR011143 HEAT1_3_F10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_F10_A029 5', mRNA sequence
Length = 762
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 44 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 103
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 104 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 163
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 164 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 223
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 224 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 283
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 284 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 343
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 344 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 403
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 404 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 450
>gb|DR019627.1|DR019627 STRS1_31_G06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_G06_A034 3', mRNA sequence
Length = 820
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Minus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 779 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 720
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 719 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 660
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 659 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 600
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 599 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 540
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 539 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 480
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 479 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 420
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 419 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 373
>gb|DR048265.1|DR048265 RTBOR1_7_D03.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_D03_A029 5', mRNA sequence
Length = 867
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 47 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 106
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 107 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 166
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 167 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 226
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 227 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 286
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 287 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 346
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 347 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 406
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 407 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 453
>gb|DR049752.1|DR049752 RTBOR1_18_G09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_G09_A029 5', mRNA sequence
Length = 772
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 126 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 185
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 186 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 245
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 246 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 305
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 306 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 365
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 366 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 425
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 426 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 485
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 486 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 532
>gb|DR117517.1|DR117517 RTMG1_7_A10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_A10_A029 5', mRNA sequence
Length = 844
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 64 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 123
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 124 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 183
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 184 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 243
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 244 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 303
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 304 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 363
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 364 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 423
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 424 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 470
>gb|DR120748.1|DR120748 RTMG1_31_D12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_D12_A029 5', mRNA sequence
Length = 627
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 64 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 123
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 124 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 183
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 184 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 243
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 244 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 303
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 304 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 363
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 364 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 423
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 424 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 470
>gb|DR181145.1|DR181145 RTMNUT1_37_C10.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_37_C10_A029 3', mRNA sequence
Length = 788
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 73 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 132
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 133 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 192
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 193 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 252
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 253 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 312
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 313 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 372
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 373 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 432
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 433 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 479
>gb|DR181222.1|DR181222 RTMNUT1_37_C10.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_37_C10_A029 5', mRNA sequence
Length = 758
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 56 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 115
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 116 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 175
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 176 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 235
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 236 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 295
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 296 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 355
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 356 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 415
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 416 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 462
>gb|DR387697.1|DR387697 RTHG1_23_B10.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_B10_A029 5', mRNA sequence
Length = 728
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 66 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcctccgacatct 125
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 126 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 185
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 186 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 245
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 246 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 305
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 306 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 365
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 366 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 425
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 426 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 472
>gb|DR744013.1|DR744013 RTCU1_19_E03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_E03_A029 5', mRNA sequence
Length = 795
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 68 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 127
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 128 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 187
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 188 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 247
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 248 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 307
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 308 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 367
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 368 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 427
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 428 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 474
>gb|DT627173.1|DT627173 EST1160249 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAV72 5' end, mRNA sequence
Length = 850
Score = 188 bits (95), Expect = 3e-046
Identities = 329/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 47 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 106
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 107 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 166
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 167 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 226
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 227 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 286
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 287 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 346
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 347 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 406
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 407 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 453
>gb|CF479351.1|CF479351 RTWW3_23_G01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_23_G01_A022 5', mRNA sequence
Length = 728
Score = 180 bits (91), Expect = 7e-044
Identities = 319/395 (80%)
Strand = Plus / Plus
Query: 152 aggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagcgcaggt 211
||||| || |||||| | ||||| |||||||||| || || || || ||||||||||||
Sbjct: 7 aggattctaaaggagctcaaggatttgcagaaggatcccccgacatcttgcagcgcaggt 66
Query: 212 cctgttggtgaggacatgttccattggcaagcgaccatcatggggccttcggacagccca 271
|| || | ||| || ||||| ||||||||||| || || ||||| ||| | || || ||
Sbjct: 67 ccagtggctgatgatatgtttcattggcaagccacgataatgggacctcctgatagtccg 126
Query: 272 tttgcaggtggggtattcttggtgaacattcacttcccaccggattaccctttcaagcca 331
| |||||| || |||||| |||| | ||||| || || || ||||| || || |||||
Sbjct: 127 tatgcagggggtgtattcgtggttactattcattttccgcctgattatccatttaagcct 186
Query: 332 ccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagcaacggcagcatt 391
|||||||| | |||||||| |||||||||||||| || || |||||||| ||||| ||
Sbjct: 187 ccaaaggttgcattccgcactaaggttttccaccccaatataaacagcaatggcagtatc 246
Query: 392 tgccttgacattcttaaggaacagtggagccctgctttaactatctcaaaggttctcctg 451
||||| ||||| || || ||||||||||| ||||| || || || || |||||| | ||
Sbjct: 247 tgcctggacatcctgaaagaacagtggagtcctgcattgacaatatccaaggttttattg 306
Query: 452 tcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtccctgagattgct 511
||||||||||| || | || || ||||||||||||||||| ||||||||||||||||||
Sbjct: 307 tcaatctgctccttgttgactgatccaaaccctgatgatccacttgtccctgagattgct 366
Query: 512 cacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||| |||| | ||||||| |||||
Sbjct: 367 cacatgtacaagaatgacaagcccaagtacgagtc 401
>gb|CV034473.1|CV034473 RTNACL1_9_D09.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_9_D09_A029 3', mRNA sequence
Length = 739
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 30 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 89
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||| ||||||| || || ||||| |||
Sbjct: 90 tgcagcgcaggtccagtggctgatgatatgtttcatcggcaagccacgataatgggacct 149
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 150 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 209
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 210 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 269
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 270 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 329
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 330 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 389
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 390 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 436
>gb|CV034530.1|CV034530 RTNACL1_9_D09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_9_D09_A029 5', mRNA sequence
Length = 762
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 45 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 104
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 105 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 164
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 165 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 224
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 225 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 284
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 285 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 344
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 345 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 404
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||| ||| |||| | ||||||| |||||
Sbjct: 405 cctgagattgctcacatgtacgagaatgacaagcccaagtacgagtc 451
>gb|CX650028.1|CX650028 COLD1_43_C02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_C02_A029 3', mRNA sequence
Length = 781
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 77 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 136
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 137 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 196
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 197 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 256
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 257 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 316
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 317 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 376
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 377 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 436
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
|||||||| |||||||||||||||| |||| | ||||||| |||||
Sbjct: 437 cctgagatcgctcacatgtacaagaatgacaagcccaagtacgagtc 483
>gb|CX650106.1|CX650106 COLD1_43_C02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_C02_A029 5', mRNA sequence
Length = 792
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 65 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 124
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 125 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 184
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 185 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 244
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 245 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 304
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 305 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 364
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 365 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 424
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
|||||||| |||||||||||||||| |||| | ||||||| |||||
Sbjct: 425 cctgagatcgctcacatgtacaagaatgacaagcccaagtacgagtc 471
>gb|DR025461.1|DR025461 STRS1_71_F04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_F04_A034 5', mRNA sequence
Length = 701
Score = 180 bits (91), Expect = 7e-044
Identities = 319/395 (80%)
Strand = Plus / Plus
Query: 152 aggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcctgcagcgcaggt 211
||||| || |||||| | ||||| |||||||||| || || || || ||||||||||||
Sbjct: 2 aggattctaaaggagctcaaggatttgcagaaggatcccccgacatcttgcagcgcaggt 61
Query: 212 cctgttggtgaggacatgttccattggcaagcgaccatcatggggccttcggacagccca 271
|| || | ||| || ||||| ||||||||||| || || ||||| ||| | || || ||
Sbjct: 62 ccagtagctgatgatatgtttcattggcaagccacgataatgggacctcctgatagtccg 121
Query: 272 tttgcaggtggggtattcttggtgaacattcacttcccaccggattaccctttcaagcca 331
| |||||| || |||||| |||| | ||||| || || || ||||| || || |||||
Sbjct: 122 tatgcagggggtgtattcgtggttactattcattttccgcctgattatccatttaagcct 181
Query: 332 ccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagcaacggcagcatt 391
|||||||| | |||||||| |||||||||||||| || || |||||||| ||||| ||
Sbjct: 182 ccaaaggttgcattccgcactaaggttttccaccccaatataaacagcaatggcagtatc 241
Query: 392 tgccttgacattcttaaggaacagtggagccctgctttaactatctcaaaggttctcctg 451
||||| ||||| || || ||||||||||| ||||| || || || || |||||| | ||
Sbjct: 242 tgcctggacatcctgaaagaacagtggagtcctgcattgacaatatccaaggttttattg 301
Query: 452 tcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtccctgagattgct 511
||||||||||| || | || || ||||||||||||||||| ||||||||||||||||||
Sbjct: 302 tcaatctgctccttgttgactgatccaaaccctgatgatccacttgtccctgagattgct 361
Query: 512 cacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||| |||| | ||||||| |||||
Sbjct: 362 cacatgtacaagaatgacaagcccaagtacgagtc 396
>gb|DR078647.1|DR078647 RTFEPL1_6_B04.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_B04_A029 3', mRNA sequence
Length = 828
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || | || ||
Sbjct: 40 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccctgacatct 99
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 100 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 159
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 160 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 219
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 220 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 279
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 280 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 339
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 340 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 399
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 400 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 446
>gb|DR078727.1|DR078727 RTFEPL1_6_B04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_6_B04_A029 5', mRNA sequence
Length = 810
Score = 180 bits (91), Expect = 7e-044
Identities = 328/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 32 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 91
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 92 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 151
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 152 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 211
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 212 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 271
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||| ||||| ||||| || || || ||
Sbjct: 272 aatggcagtatctgcctggacatcctgaaagaacactggagtcctgcattgacaatatcc 331
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 332 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 391
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 392 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 438
>gb|BF778586.1|BF778586 NXSI_088_D07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_088_D07 5' similar to Arabidopsis thaliana
sequence At4g27960 ubiquitin-protein ligase UBC9 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 509
Score = 178 bits (90), Expect = 3e-043
Identities = 311/385 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 58 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 117
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 118 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 177
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 178 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 237
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 238 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 297
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 298 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 357
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
||| || | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 358 aagnttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 417
Query: 500 cctgagattgctcacatgtacaaga 524
|||||||||||||||||||||||||
Sbjct: 418 cctgagattgctcacatgtacaaga 442
>gb|BQ702704.1|BQ702704 NXSI_131_F04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_131_F04 5' similar to Arabidopsis thaliana
sequence At5g53300 ubiquitin-conjugating enzyme E2-17 kD
10 (ubiquitin-protein ligase 10) (ubiquitin carrier
protein 10) (sp|P35133) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 490
Score = 178 bits (90), Expect = 3e-043
Identities = 300/370 (81%)
Strand = Plus / Plus
Query: 177 tgcagaaggacccgcccacctcctgcagcgcaggtcctgttggtgaggacatgttccatt 236
|||||||||| || || || || |||||||||||||| || | ||| || ||||| ||||
Sbjct: 14 tgcagaaggatcccccgacatcttgcagcgcaggtccagtggctgatgatatgtttcatt 73
Query: 237 ggcaagcgaccatcatggggccttcggacagcccatttgcaggtggggtattcttggtga 296
||||||| || || ||||| ||| | || || || | |||||| || |||||| |||| |
Sbjct: 74 ggcaagccacgataatgggacctcctgatagtccgtatgcagggggtgtattcgtggtta 133
Query: 297 acattcacttcccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaagg 356
||||| || || || ||||| || || ||||| |||||||| | |||||||| ||||
Sbjct: 134 ctattcattttccgcctgattatccatttaagcctccaaaggttgcattccgcactaagg 193
Query: 357 ttttccacccgaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagt 416
|||||||||| || || |||||||| ||||| || ||||| ||||| || || |||||||
Sbjct: 194 ttttccaccccaatataaacagcaatggcagtatctgcctggacatcctgaaagaacagt 253
Query: 417 ggagccctgctttaactatctcaaaggttctcctgtcaatctgctcactgctcacggacc 476
|||| ||||| || || || || |||||| | ||||||||||||| || | || || |
Sbjct: 254 ggagtcctgcattgacaatatccaaggttttattgtcaatctgctccttgttgactgatc 313
Query: 477 caaaccctgatgatcctcttgtccctgagattgctcacatgtacaagaccgacagggcca 536
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 314 caaaccctgatgatccacttgtccctgagattgctcacatgtacaagaatgacaagccca 373
Query: 537 agtatgagtc 546
|||| |||||
Sbjct: 374 agtacgagtc 383
>gb|CO197983.1|CO197983 GEO1_10_B04.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_10_B04_A029 5', mRNA sequence
Length = 798
Score = 178 bits (90), Expect = 3e-043
Identities = 300/370 (81%)
Strand = Plus / Minus
Query: 177 tgcagaaggacccgcccacctcctgcagcgcaggtcctgttggtgaggacatgttccatt 236
|||||||||| || || || || |||||||||||||| || | ||| || ||||| ||||
Sbjct: 790 tgcagaaggatcccccgacatcttgcagcgcaggtccagtggctgatgatatgtttcatt 731
Query: 237 ggcaagcgaccatcatggggccttcggacagcccatttgcaggtggggtattcttggtga 296
||||||| || || ||||| ||| | || || || | |||||| || |||||| |||| |
Sbjct: 730 ggcaagccacgataatgggacctcctgatagtccgtatgcagggggtgtattcgtggtta 671
Query: 297 acattcacttcccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaagg 356
||||| || || || ||||| || || ||||| |||||||| | |||||||| ||||
Sbjct: 670 ctattcattttccgcctgattatccatttaagcctccaaaggttgcattccgcactaagg 611
Query: 357 ttttccacccgaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagt 416
|||||||||| || || |||||||| ||||| || ||||| ||||| || || |||||||
Sbjct: 610 ttttccaccccaatataaacagcaatggcagtatctgcctggacatcctgaaagaacagt 551
Query: 417 ggagccctgctttaactatctcaaaggttctcctgtcaatctgctcactgctcacggacc 476
|||| ||||| || || || || |||||| | ||||||||||||| || | || || |
Sbjct: 550 ggagtcctgcattgacaatatccaaggttttattgtcaatctgctccttgttgactgatc 491
Query: 477 caaaccctgatgatcctcttgtccctgagattgctcacatgtacaagaccgacagggcca 536
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 490 caaaccctgatgatccacttgtccctgagattgctcacatgtacaagaatgacaagccca 431
Query: 537 agtatgagtc 546
|||| |||||
Sbjct: 430 agtacgagtc 421
>gb|DR120664.1|DR120664 RTMG1_31_D12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_D12_A029 3', mRNA sequence
Length = 777
Score = 178 bits (90), Expect = 3e-043
Identities = 300/370 (81%)
Strand = Plus / Plus
Query: 177 tgcagaaggacccgcccacctcctgcagcgcaggtcctgttggtgaggacatgttccatt 236
|||||||||| || || || || |||||||||||||| || | ||| || ||||| ||||
Sbjct: 6 tgcagaaggatcccccgacatcttgcagcgcaggtccagtggctgatgatatgtttcatt 65
Query: 237 ggcaagcgaccatcatggggccttcggacagcccatttgcaggtggggtattcttggtga 296
||||||| || || ||||| ||| | || || || | |||||| || |||||| |||| |
Sbjct: 66 ggcaagccacgataatgggacctcctgatagtccgtatgcagggggtgtattcgtggtta 125
Query: 297 acattcacttcccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaagg 356
||||| || || || ||||| || || ||||| |||||||| | |||||||| ||||
Sbjct: 126 ctattcattttccgcctgattatccatttaagcctccaaaggttgcattccgcactaagg 185
Query: 357 ttttccacccgaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagt 416
|||||||||| || || |||||||| ||||| || ||||| ||||| || || |||||||
Sbjct: 186 ttttccaccccaatataaacagcaatggcagtatctgcctggacatcctgaaagaacagt 245
Query: 417 ggagccctgctttaactatctcaaaggttctcctgtcaatctgctcactgctcacggacc 476
|||| ||||| || || || || |||||| | ||||||||||||| || | || || |
Sbjct: 246 ggagtcctgcattgacaatatccaaggttttattgtcaatctgctccttgttgactgatc 305
Query: 477 caaaccctgatgatcctcttgtccctgagattgctcacatgtacaagaccgacagggcca 536
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 306 caaaccctgatgatccacttgtccctgagattgctcacatgtacaagaatgacaagccca 365
Query: 537 agtatgagtc 546
|||| |||||
Sbjct: 366 agtacgagtc 375
>gb|DR743944.1|DR743944 RTCU1_19_E03.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_19_E03_A029 3', mRNA sequence
Length = 764
Score = 178 bits (90), Expect = 3e-043
Identities = 300/370 (81%)
Strand = Plus / Plus
Query: 177 tgcagaaggacccgcccacctcctgcagcgcaggtcctgttggtgaggacatgttccatt 236
|||||||||| || || || || |||||||||||||| || | ||| || ||||| ||||
Sbjct: 13 tgcagaaggatcccccgacatcttgcagcgcaggtccagtggctgatgatatgtttcatt 72
Query: 237 ggcaagcgaccatcatggggccttcggacagcccatttgcaggtggggtattcttggtga 296
||||||| || || ||||| ||| | || || || | |||||| || |||||| |||| |
Sbjct: 73 ggcaagccacgataatgggacctcctgatagtccgtatgcagggggtgtattcgtggtta 132
Query: 297 acattcacttcccaccggattaccctttcaagccaccaaaggtgtctttccgcaccaagg 356
||||| || || || ||||| || || ||||| |||||||| | |||||||| ||||
Sbjct: 133 ctattcattttccgcctgattatccatttaagcctccaaaggttgcattccgcactaagg 192
Query: 357 ttttccacccgaacatcaacagcaacggcagcatttgccttgacattcttaaggaacagt 416
|||||||||| || || |||||||| ||||| || ||||| ||||| || || |||||||
Sbjct: 193 ttttccaccccaatataaacagcaatggcagtatctgcctggacatcctgaaagaacagt 252
Query: 417 ggagccctgctttaactatctcaaaggttctcctgtcaatctgctcactgctcacggacc 476
|||| ||||| || || || || |||||| | ||||||||||||| || | || || |
Sbjct: 253 ggagtcctgcattgacaatatccaaggttttattgtcaatctgctccttgttgactgatc 312
Query: 477 caaaccctgatgatcctcttgtccctgagattgctcacatgtacaagaccgacagggcca 536
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 313 caaaccctgatgatccacttgtccctgagattgctcacatgtacaagaatgacaagccca 372
Query: 537 agtatgagtc 546
|||| |||||
Sbjct: 373 agtacgagtc 382
>gb|BX249420.1|BX249420 BX249420 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP023G12 similar to UBIQUITIN CONJUGATING
ENZYME, mRNA sequence
Length = 649
Score = 176 bits (89), Expect = 1e-042
Identities = 311/385 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| |||||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 104 atggcgtctaagaggattcttaaggagctcaaggatttgcagaaggatcccccgacatct 163
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 164 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 223
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || |||| |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 224 cctgatagtccatatgcagggggtgtattcctggttactattcattttcctcctgattat 283
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 284 ccatttaagcctccaaaggttgcattccgcactaaggttttccacccaaatataaacagc 343
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 344 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 403
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| || |
Sbjct: 404 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccactcgct 463
Query: 500 cctgagattgctcacatgtacaaga 524
|||||||||||||||||||||||||
Sbjct: 464 cctgagattgctcacatgtacaaga 488
>gb|AA556455.1|AA556455 310 Loblolly pine C Pinus taeda cDNA clone 4C10H, mRNA sequence
Length = 684
Score = 174 bits (88), Expect = 4e-042
Identities = 310/385 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 21 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 80
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 81 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 140
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 141 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 200
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || || ||||||
Sbjct: 201 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatataaacagc 260
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
|| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 261 aatggcagtatctgcctggacatcctgaaagaacagtggagtcctgcnttgacaatatcc 320
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| | | || || ||||||||||||||||| ||||||
Sbjct: 321 aaggttttattgtcaatctgctcctngttgactgatccaaaccctgatgatccacttgtc 380
Query: 500 cctgagattgctcacatgtacaaga 524
||||||||||||||||||| |||||
Sbjct: 381 cctgagattgctcacatgtncaaga 405
>gb|AW011444.1|AW011444 ST20G12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST20G12, mRNA sequence
Length = 601
Score = 174 bits (88), Expect = 4e-042
Identities = 327/407 (80%)
Strand = Plus / Plus
Query: 140 atggcgtcgaagaggatcctgaaggagttgaaggacctgcagaaggacccgcccacctcc 199
|||||||| || ||||| || |||||| | ||||| |||||||||| || || || ||
Sbjct: 19 atggcgtctaaaaggattctaaaggagctcaaggatttgcagaaggatcccccgacatct 78
Query: 200 tgcagcgcaggtcctgttggtgaggacatgttccattggcaagcgaccatcatggggcct 259
|||||||||||||| || | ||| || ||||| ||||||||||| || || ||||| |||
Sbjct: 79 tgcagcgcaggtccagtggctgatgatatgtttcattggcaagccacgataatgggacct 138
Query: 260 tcggacagcccatttgcaggtggggtattcttggtgaacattcacttcccaccggattac 319
| || || || | |||||| || |||||| |||| | ||||| || || || |||||
Sbjct: 139 cctgatagtccgtatgcagggggtgtattcgtggttactattcattttccgcctgattat 198
Query: 320 cctttcaagccaccaaaggtgtctttccgcaccaaggttttccacccgaacatcaacagc 379
|| || ||||| |||||||| | |||||||| |||||||||||||| || | ||||||
Sbjct: 199 ccatttaagcctccaaaggttgcattccgcactaaggttttccaccccaatanaaacagc 258
Query: 380 aacggcagcatttgccttgacattcttaaggaacagtggagccctgctttaactatctca 439
| ||||| || ||||| ||||| || || ||||||||||| ||||| || || || ||
Sbjct: 259 agtggcagtatctgcctggacatcctgaaagaacagtggagtcctgcattgacaatatcc 318
Query: 440 aaggttctcctgtcaatctgctcactgctcacggacccaaaccctgatgatcctcttgtc 499
|||||| | ||||||||||||| || | || || ||||||||||||||||| ||||||
Sbjct: 319 aaggttttattgtcaatctgctccttgttgactgatccaaaccctgatgatccacttgtc 378
Query: 500 cctgagattgctcacatgtacaagaccgacagggccaagtatgagtc 546
||||||||||||||||||||||||| |||| | ||||||| |||||
Sbjct: 379 cctgagattgctcacatgtacaagaatgacaagcccaagtacgagtc 425
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 98,030
Number of Sequences: 355925
Number of extensions: 98030
Number of successful extensions: 29645
Number of sequences better than 0.5: 595
Number of HSP's better than 0.5 without gapping: 591
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 28465
Number of HSP's gapped (non-prelim): 1078
length of query: 931
length of database: 217,277,237
effective HSP length: 19
effective length of query: 912
effective length of database: 210,514,662
effective search space: 191989371744
effective search space used: 191989371744
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)