BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441542.2.1
(3782 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRN... 400 e-109
gb|DR059426.1|DR059426 RTNIT1_17_D03.g1_A029 Roots minus ni... 323 3e-086
gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mR... 280 4e-073
gb|AY262817.1| Pinus radiata cellulose synthase (CesA6) mRN... 208 1e-051
gb|DR080401.1|DR080401 RTFEPL1_22_A02.g1_A029 Roots plus ad... 200 3e-049
gb|AY789651.1| Pinus taeda cellulose synthase catalytic sub... 192 7e-047
gb|AY262818.1| Pinus radiata cellulose synthase (CesA7) mRN... 192 7e-047
gb|AY789652.1| Pinus taeda cellulose synthase catalytic sub... 186 5e-045
gb|AY262819.1| Pinus radiata cellulose synthase (CesA8) mRN... 184 2e-044
gb|AY639654.1| Pinus radiata cellulose synthase catalytic s... 178 1e-042
dbj|BD235986.1| Materials and method for modification of pl... 172 7e-041
dbj|BD236020.1| Materials and method for modification of pl... 170 3e-040
gb|DR384721.1|DR384721 RTHG1_4_D04.b1_A029 Roots plus added... 168 1e-039
gb|CO201610.1|CO201610 RTCNT2_7_A01.b1_A029 Root control 2 ... 137 4e-030
gb|DR686101.1|DR686101 EST1076179 Normalized pine embryo li... 127 4e-027
gb|DR744890.1|DR744890 RTCU1_25_C12.g1_A029 Roots plus adde... 123 6e-026
gb|AY262816.1| Pinus radiata cellulose synthase (CesA5) mRN... 123 6e-026
gb|BX682714.1|BX682714 BX682714 Pinus pinaster differenciat... 119 9e-025
gb|AW010875.1|AW010875 ST12E01 Pine TriplEx shoot tip libra... 117 3e-024
gb|CO369942.1|CO369942 RTK1_55_A04.g1_A029 Roots minus pota... 117 3e-024
gb|BX249248.1|BX249248 BX249248 Pinus pinaster differenciat... 111 2e-022
gb|BE657157.1|BE657157 NXCI_064_G04_F NXCI (Nsf Xylem Compr... 111 2e-022
gb|AA556640.1|AA556640 495 Loblolly pine C Pinus taeda cDNA... 109 8e-022
gb|AW985306.1|AW985306 NXNV_135_F04_F Nsf Xylem Normal wood... 107 3e-021
gb|BE996873.1|BE996873 NXCI_103_E08_F NXCI (Nsf Xylem Compr... 107 3e-021
gb|CF668299.1|CF668299 RTCNT1_35_D11.g1_A029 Root control P... 107 3e-021
gb|CF672886.1|CF672886 RTCNT1_74_D05.g1_A029 Root control P... 107 3e-021
gb|CX646526.1|CX646526 COLD1_9_H07.g1_A029 Root cold Pinus ... 107 3e-021
gb|DR054410.1|DR054410 RTCA1_17_D10.b1_A029 Roots minus cal... 107 3e-021
gb|DR110920.1|DR110920 RTS1_14_B08.b1_A029 Roots minus sulf... 107 3e-021
dbj|BD235989.1| Materials and method for modification of pl... 107 3e-021
gb|AY789650.1| Pinus taeda cellulose synthase catalytic sub... 107 3e-021
gb|AW697996.1|AW697996 NXNV_079_C07_F Nsf Xylem Normal wood... 105 1e-020
gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulos... 105 1e-020
gb|AY764674.1|AY764673S2 Pinus taeda isolate 11 cellulose s... 105 1e-020
gb|BE187012.1|BE187012 NXNV_157_H10_F Nsf Xylem Normal wood... 103 5e-020
gb|BV079715.1| Pp_CesA3 Pinus pinaster megagametophytes Pin... 103 5e-020
gb|BQ196805.1|BQ196805 NXLV105_E07_F NXLV (Nsf Xylem Late w... 101 2e-019
gb|BG317558.1|BG317558 NXPV_003_B08_F NXPV (Nsf Xylem Plani... 100 8e-019
gb|DR118589.1|DR118589 RTMG1_18_A07.b1_A029 Roots minus mag... 100 8e-019
gb|BG039685.1|BG039685 NXSI_102_H08_F NXSI (Nsf Xylem Side ... 98 3e-018
gb|BQ695648.1|BQ695648 NXPV_030_H04_F NXPV (Nsf Xylem Plani... 98 3e-018
gb|BQ697774.1|BQ697774 NXPV_052_F10_F NXPV (Nsf Xylem Plani... 98 3e-018
gb|BQ703105.1|BQ703105 NXSI_136_D09_F NXSI (Nsf Xylem Side ... 98 3e-018
gb|DR060720.1|DR060720 RTNIT1_29_C08.g1_A029 Roots minus ni... 98 3e-018
gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulos... 98 3e-018
gb|AY764676.1|AY764675S2 Pinus taeda isolate 16 cellulose s... 98 3e-018
gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulos... 98 3e-018
gb|AY764678.1|AY764677S2 Pinus taeda isolate 25 cellulose s... 98 3e-018
gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose... 98 3e-018
gb|AY764680.1|AY764679S2 Pinus taeda isolate 7 cellulose sy... 98 3e-018
gb|AH014294.1|SEG_AY764681S Pinus taeda isolate 6 cellulose... 98 3e-018
gb|AY764682.1|AY764681S2 Pinus taeda isolate 6 cellulose sy... 98 3e-018
gb|AH014295.1|SEG_AY764683S Pinus taeda isolate 4 cellulose... 98 3e-018
gb|AY764684.1|AY764683S2 Pinus taeda isolate 4 cellulose sy... 98 3e-018
gb|AH014296.1|SEG_AY764685S Pinus taeda isolate 26 cellulos... 98 3e-018
gb|AY764686.1|AY764685S2 Pinus taeda isolate 26 cellulose s... 98 3e-018
gb|AH014297.1|SEG_AY764687S Pinus taeda isolate 9 cellulose... 98 3e-018
gb|AY764688.1|AY764687S2 Pinus taeda isolate 9 cellulose sy... 98 3e-018
gb|AH014299.1|SEG_AY764691S Pinus taeda isolate 13 cellulos... 98 3e-018
gb|AY764692.1|AY764691S2 Pinus taeda isolate 13 cellulose s... 98 3e-018
gb|AH014300.1|SEG_AY764693S Pinus taeda isolate 30 cellulos... 98 3e-018
gb|AY764694.1|AY764693S2 Pinus taeda isolate 30 cellulose s... 98 3e-018
gb|AH014301.1|SEG_AY764695S Pinus taeda isolate 22 cellulos... 98 3e-018
gb|AY764696.1|AY764695S2 Pinus taeda isolate 22 cellulose s... 98 3e-018
gb|AH014302.1|SEG_AY764697S Pinus taeda isolate 32 cellulos... 98 3e-018
gb|AY764698.1|AY764697S2 Pinus taeda isolate 32 cellulose s... 98 3e-018
gb|AH014303.1|SEG_AY764699S Pinus taeda isolate 18 cellulos... 98 3e-018
gb|AY764700.1|AY764699S2 Pinus taeda isolate 18 cellulose s... 98 3e-018
gb|AH014304.1|SEG_AY764701S Pinus taeda isolate 10 cellulos... 98 3e-018
gb|AY764702.1|AY764701S2 Pinus taeda isolate 10 cellulose s... 98 3e-018
gb|AH014305.1|SEG_AY764703S Pinus taeda isolate 14 cellulos... 98 3e-018
gb|AY764704.1|AY764703S2 Pinus taeda isolate 14 cellulose s... 98 3e-018
gb|AH014306.1|SEG_AY764705S Pinus taeda isolate 21 cellulos... 98 3e-018
gb|AY764706.1|AY764705S2 Pinus taeda isolate 21 cellulose s... 98 3e-018
gb|AH014307.1|SEG_AY764707S Pinus taeda isolate 31 cellulos... 98 3e-018
gb|AY764708.1|AY764707S2 Pinus taeda isolate 31 cellulose s... 98 3e-018
gb|AH014308.1|SEG_AY764709S Pinus taeda isolate 5 cellulose... 98 3e-018
gb|AY764710.1|AY764709S2 Pinus taeda isolate 5 cellulose sy... 98 3e-018
gb|AH014309.1|SEG_AY764711S Pinus taeda isolate 2 cellulose... 98 3e-018
gb|AY764712.1|AY764711S2 Pinus taeda isolate 2 cellulose sy... 98 3e-018
gb|AH014310.1|SEG_AY764713S Pinus taeda isolate 3 cellulose... 98 3e-018
gb|AY764714.1|AY764713S2 Pinus taeda isolate 3 cellulose sy... 98 3e-018
gb|AH014311.1|SEG_AY764715S Pinus taeda isolate 19 cellulos... 98 3e-018
gb|AY764716.1|AY764715S2 Pinus taeda isolate 19 cellulose s... 98 3e-018
gb|AH014312.1|SEG_AY764717S Pinus taeda isolate 28 cellulos... 98 3e-018
gb|AY764718.1|AY764717S2 Pinus taeda isolate 28 cellulose s... 98 3e-018
gb|AH014313.1|SEG_AY764719S Pinus taeda isolate 17 cellulos... 98 3e-018
gb|AY764720.1|AY764719S2 Pinus taeda isolate 17 cellulose s... 98 3e-018
gb|AH014314.1|SEG_AY764721S Pinus taeda isolate 8 cellulose... 98 3e-018
gb|AY764722.1|AY764721S2 Pinus taeda isolate 8 cellulose sy... 98 3e-018
gb|AH014316.1|SEG_AY764725S Pinus taeda isolate 1 cellulose... 98 3e-018
gb|AY764726.1|AY764725S2 Pinus taeda isolate 1 cellulose sy... 98 3e-018
gb|AH014317.1|SEG_AY764727S Pinus taeda isolate 29 cellulos... 98 3e-018
gb|AY764728.1|AY764727S2 Pinus taeda isolate 29 cellulose s... 98 3e-018
gb|AH014318.1|SEG_AY764729S Pinus taeda isolate 20 cellulos... 98 3e-018
gb|AY764730.1|AY764729S2 Pinus taeda isolate 20 cellulose s... 98 3e-018
gb|AH014320.1|SEG_AY764733S Pinus taeda isolate 12 cellulos... 98 3e-018
gb|AY764734.1|AY764733S2 Pinus taeda isolate 12 cellulose s... 98 3e-018
gb|AH014321.1|SEG_AY764735S Pinus taeda isolate 24 cellulos... 98 3e-018
gb|AY764736.1|AY764735S2 Pinus taeda isolate 24 cellulose s... 98 3e-018
gb|BQ701215.1|BQ701215 NXSI_023_H05_F NXSI (Nsf Xylem Side ... 96 1e-017
gb|CO169549.1|CO169549 NDL1_7_F09.g1_A029 Needles control P... 96 1e-017
gb|AH014298.1|SEG_AY764689S Pinus taeda isolate 23 cellulos... 96 1e-017
gb|AY764690.1|AY764689S2 Pinus taeda isolate 23 cellulose s... 96 1e-017
gb|AH014315.1|SEG_AY764723S Pinus taeda isolate 15 cellulos... 96 1e-017
gb|AY764724.1|AY764723S2 Pinus taeda isolate 15 cellulose s... 96 1e-017
gb|AY262815.1| Pinus radiata cellulose synthase (CesA3) mRN... 96 1e-017
gb|AY764673.1|AY764673S1 Pinus taeda isolate 11 cellulose s... 92 2e-016
gb|AY764675.1|AY764675S1 Pinus taeda isolate 16 cellulose s... 92 2e-016
gb|AY764677.1|AY764677S1 Pinus taeda isolate 25 cellulose s... 92 2e-016
gb|AY764679.1|AY764679S1 Pinus taeda isolate 7 cellulose sy... 92 2e-016
gb|AY764681.1|AY764681S1 Pinus taeda isolate 6 cellulose sy... 92 2e-016
gb|AY764683.1|AY764683S1 Pinus taeda isolate 4 cellulose sy... 92 2e-016
gb|AY764685.1|AY764685S1 Pinus taeda isolate 26 cellulose s... 92 2e-016
gb|AY764687.1|AY764687S1 Pinus taeda isolate 9 cellulose sy... 92 2e-016
gb|AY764689.1|AY764689S1 Pinus taeda isolate 23 cellulose s... 92 2e-016
gb|AY764691.1|AY764691S1 Pinus taeda isolate 13 cellulose s... 92 2e-016
gb|AY764693.1|AY764693S1 Pinus taeda isolate 30 cellulose s... 92 2e-016
gb|AY764695.1|AY764695S1 Pinus taeda isolate 22 cellulose s... 92 2e-016
gb|AY764697.1|AY764697S1 Pinus taeda isolate 32 cellulose s... 92 2e-016
gb|AY764699.1|AY764699S1 Pinus taeda isolate 18 cellulose s... 92 2e-016
gb|AY764701.1|AY764701S1 Pinus taeda isolate 10 cellulose s... 92 2e-016
gb|AY764703.1|AY764703S1 Pinus taeda isolate 14 cellulose s... 92 2e-016
gb|AY764705.1|AY764705S1 Pinus taeda isolate 21 cellulose s... 92 2e-016
gb|AY764707.1|AY764707S1 Pinus taeda isolate 31 cellulose s... 92 2e-016
gb|AY764709.1|AY764709S1 Pinus taeda isolate 5 cellulose sy... 92 2e-016
gb|AY764711.1|AY764711S1 Pinus taeda isolate 2 cellulose sy... 92 2e-016
gb|AY764713.1|AY764713S1 Pinus taeda isolate 3 cellulose sy... 92 2e-016
gb|AY764715.1|AY764715S1 Pinus taeda isolate 19 cellulose s... 92 2e-016
gb|AY764717.1|AY764717S1 Pinus taeda isolate 28 cellulose s... 92 2e-016
gb|AY764719.1|AY764719S1 Pinus taeda isolate 17 cellulose s... 92 2e-016
gb|AY764721.1|AY764721S1 Pinus taeda isolate 8 cellulose sy... 92 2e-016
gb|AY764723.1|AY764723S1 Pinus taeda isolate 15 cellulose s... 92 2e-016
gb|AY764725.1|AY764725S1 Pinus taeda isolate 1 cellulose sy... 92 2e-016
gb|AY764727.1|AY764727S1 Pinus taeda isolate 29 cellulose s... 92 2e-016
gb|AY764729.1|AY764729S1 Pinus taeda isolate 20 cellulose s... 92 2e-016
gb|AH014319.1|SEG_AY764731S Pinus taeda isolate 27 cellulos... 92 2e-016
gb|AY764731.1|AY764731S1 Pinus taeda isolate 27 cellulose s... 92 2e-016
gb|AY764733.1|AY764733S1 Pinus taeda isolate 12 cellulose s... 92 2e-016
gb|AY764735.1|AY764735S1 Pinus taeda isolate 24 cellulose s... 92 2e-016
gb|AY764732.1|AY764731S2 Pinus taeda isolate 27 cellulose s... 90 8e-016
gb|AA556746.1|AA556746 588 Loblolly pine NA Pinus taeda cDN... 88 3e-015
gb|BG275715.1|BG275715 NXSI_145_B01_F NXSI (Nsf Xylem Side ... 84 5e-014
gb|DR020730.1|DR020730 STRS1_38_H10.g1_A034 Shoot tip pitch... 84 5e-014
gb|BI202889.1|BI202889 NXPV_091_H09_F NXPV (Nsf Xylem Plani... 82 2e-013
gb|BF778216.1|BF778216 NXSI_083_G10_F NXSI (Nsf Xylem Side ... 80 8e-013
gb|BF778499.1|BF778499 NXSI_085_D12_F NXSI (Nsf Xylem Side ... 80 8e-013
gb|CF666027.1|CF666027 RTCNT1_20_E07.b1_A029 Root control P... 80 8e-013
gb|CF672816.1|CF672816 RTCNT1_74_D05.b1_A029 Root control P... 80 8e-013
gb|CO168623.1|CO168623 NDL1_1_A02.g1_A029 Needles control P... 80 8e-013
gb|BX250234.1|BX250234 BX250234 Pinus pinaster differenciat... 76 1e-011
gb|BG275945.1|BG275945 NXSI_149_G12_F NXSI (Nsf Xylem Side ... 76 1e-011
gb|AA556522.1|AA556522 377 Loblolly pine C Pinus taeda cDNA... 74 5e-011
gb|BX254022.1|BX254022 BX254022 Pinus pinaster differenciat... 72 2e-010
gb|BX254483.1|BX254483 BX254483 Pinus pinaster differenciat... 72 2e-010
gb|BX254948.1|BX254948 BX254948 Pinus pinaster differenciat... 72 2e-010
gb|BX255349.1|BX255349 BX255349 Pinus pinaster differenciat... 72 2e-010
gb|AW985238.1|AW985238 NXNV_132_G11_F Nsf Xylem Normal wood... 72 2e-010
gb|BF609149.1|BF609149 NXSI_040_H08_F NXSI (Nsf Xylem Side ... 72 2e-010
gb|BF609565.1|BF609565 NXSI_046_C11_F NXSI (Nsf Xylem Side ... 72 2e-010
gb|BF777661.1|BF777661 NXSI_073_C10_F NXSI (Nsf Xylem Side ... 72 2e-010
gb|BG040499.1|BG040499 NXSI_108_H05_F NXSI (Nsf Xylem Side ... 72 2e-010
gb|BG275218.1|BG275218 NXSI_138_C06_F NXSI (Nsf Xylem Side ... 72 2e-010
gb|AL750979.1|AL750979 AL750979 RS Pinus pinaster cDNA clon... 70 7e-010
gb|CD016846.1|CD016846 NXCI_064_H04_F NXCI (Nsf Xylem Compr... 70 7e-010
gb|DR101934.1|DR101934 STRR1_76_G04.g1_A033 Stem Response R... 70 7e-010
gb|CF478017.1|CF478017 RTWW3_17_B06.g1_A022 Well-watered lo... 66 1e-008
gb|BV079717.1| Pp_CesA7 Pinus pinaster megagametophytes Pin... 66 1e-008
gb|BX000643.1|BX000643 BX000643 Pinus pinaster xylem Pinus ... 64 5e-008
gb|CD022890.1|CD022890 NXPV_089_B01_F NXPV (Nsf Xylem Plani... 64 5e-008
gb|BX249614.1|BX249614 BX249614 Pinus pinaster differenciat... 62 2e-007
gb|BX252761.1|BX252761 BX252761 Pinus pinaster differenciat... 62 2e-007
gb|BX254358.1|BX254358 BX254358 Pinus pinaster differenciat... 62 2e-007
gb|BF517368.1|BF517368 NXSI_013_F11_F NXSI (Nsf Xylem Side ... 62 2e-007
gb|BG832808.1|BG832808 NXPV_080_C10_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BQ695964.1|BQ695964 NXPV_034_H04_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BQ698119.1|BQ698119 NXPV_064_G05_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|BQ698366.1|BQ698366 NXPV_069_A10_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|CD023046.1|CD023046 NXPV_098_A07_F NXPV (Nsf Xylem Plani... 62 2e-007
gb|CF476470.1|CF476470 RTWW3_1_C10.g1_A022 Well-watered lob... 62 2e-007
gb|CF668221.1|CF668221 RTCNT1_35_D11.b1_A029 Root control P... 62 2e-007
gb|CO369260.1|CO369260 RTK1_46_B01.b1_A029 Roots minus pota... 62 2e-007
gb|DR110657.1|DR110657 RTS1_12_E03.b1_A029 Roots minus sulf... 62 2e-007
gb|DR110744.1|DR110744 RTS1_12_E03.g1_A029 Roots minus sulf... 62 2e-007
gb|AY262814.1| Pinus radiata cellulose synthase (CesA11) mR... 62 2e-007
gb|BF169757.1|BF169757 NXCI_128_G07_F NXCI (Nsf Xylem Compr... 60 7e-007
gb|AW984889.1|AW984889 NXNV_100_C02_F Nsf Xylem Normal wood... 58 3e-006
gb|CD017587.1|CD017587 NXCI_129_A12_F NXCI (Nsf Xylem Compr... 58 3e-006
gb|CD020015.1|CD020015 NXNV017A03 Nsf Xylem Normal wood Ver... 58 3e-006
gb|CD022200.1|CD022200 NXPV_024_F02_F NXPV (Nsf Xylem Plani... 58 3e-006
gb|BX250396.1|BX250396 BX250396 Pinus pinaster differenciat... 56 1e-005
gb|BX255542.1|BX255542 BX255542 Pinus pinaster differenciat... 56 1e-005
gb|AW870284.1|AW870284 NXNV_128_H04_F Nsf Xylem Normal wood... 56 1e-005
gb|BG040950.1|BG040950 NXSI_117_A06_F NXSI (Nsf Xylem Side ... 56 1e-005
gb|AW011234.1|AW011234 ST18D02 Pine TriplEx shoot tip libra... 54 4e-005
gb|AW289623.1|AW289623 NXNV003H02F Nsf Xylem Normal wood Ve... 54 4e-005
gb|BE996842.1|BE996842 NXCI_103_B03_F NXCI (Nsf Xylem Compr... 54 4e-005
gb|BF220717.1|BF220717 NXCI_149_G02_F NXCI (Nsf Xylem Compr... 54 4e-005
gb|BF221043.1|BF221043 NXCI_162_E11_F NXCI (Nsf Xylem Compr... 54 4e-005
gb|BF610213.1|BF610213 NXSI_056_B10_F NXSI (Nsf Xylem Side ... 54 4e-005
gb|BF778225.1|BF778225 NXSI_083_H07_F NXSI (Nsf Xylem Side ... 54 4e-005
gb|BG673833.1|BG673833 NXPV_075_F11_F NXPV (Nsf Xylem Plani... 54 4e-005
gb|BM428045.1|BM428045 NXRV_008_A09_F NXRV (Nsf Xylem Root ... 54 4e-005
gb|BQ291066.1|BQ291066 NXRV055_C03_F NXRV (Nsf Xylem Root w... 54 4e-005
gb|BQ702475.1|BQ702475 NXSI_129_A10_F NXSI (Nsf Xylem Side ... 54 4e-005
gb|CD028231.1|CD028231 NXNV003H02 Nsf Xylem Normal wood Ver... 54 4e-005
gb|CF390276.1|CF390276 RTDR2_18_A03.g1_A021 Loblolly pine r... 54 4e-005
gb|CF396363.1|CF396363 RTDS2_21_F06.g1_A021 Drought-stresse... 54 4e-005
gb|CO369344.1|CO369344 RTK1_46_B01.g1_A029 Roots minus pota... 54 4e-005
gb|BE643804.1|BE643804 NXCI_047_D12_F NXCI (Nsf Xylem Compr... 52 2e-004
gb|CF478399.1|CF478399 RTWW3_18_G11.g1_A022 Well-watered lo... 52 2e-004
gb|CV031645.1|CV031645 RTNACL1_2_G07.g1_A029 Roots plus add... 52 2e-004
gb|BF609760.1|BF609760 NXSI_050_B03_F NXSI (Nsf Xylem Side ... 50 7e-004
gb|BX682482.1|BX682482 BX682482 Pinus pinaster differenciat... 50 7e-004
gb|BX682490.1|BX682490 BX682490 Pinus pinaster differenciat... 50 7e-004
gb|DN609460.1|DN609460 EST962510 Subtracted pine embryo lib... 50 7e-004
gb|DR017506.1|DR017506 STRS1_16_E10.g1_A034 Shoot tip pitch... 50 7e-004
gb|DT627755.1|DT627755 EST1156504 Subtracted pine embryo li... 50 7e-004
gb|AI812887.1|AI812887 22B3 Pine Lambda Zap Xylem library P... 48 0.003
gb|AW698053.1|AW698053 NXNV_072_F12_F Nsf Xylem Normal wood... 48 0.003
gb|BE209203.1|BE209203 NXNV_147_C08_F Nsf Xylem Normal wood... 48 0.003
gb|BE643725.1|BE643725 NXCI_043_H03_F NXCI (Nsf Xylem Compr... 48 0.003
gb|BE656835.1|BE656835 NXCI_040_B06_F NXCI (Nsf Xylem Compr... 48 0.003
gb|BF010934.1|BF010934 NXCI_094_H06_F NXCI (Nsf Xylem Compr... 48 0.003
gb|BF610475.1|BF610475 NXSI_058_H08_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BG039408.1|BG039408 NXSI_098_F10_F NXSI (Nsf Xylem Side ... 48 0.003
gb|BQ702504.1|BQ702504 NXSI_129_D04_F NXSI (Nsf Xylem Side ... 48 0.003
gb|CD017522.1|CD017522 NXCI_124_B01_F NXCI (Nsf Xylem Compr... 48 0.003
gb|CF666095.1|CF666095 RTCNT1_20_E07.g1_A029 Root control P... 48 0.003
gb|BE457983.1|BE457983 NXCI_008_H12_F NXCI (Nsf Xylem Compr... 46 0.011
gb|BE520100.1|BE520100 NXCI_016_G11_F NXCI (Nsf Xylem Compr... 46 0.011
gb|BF777175.1|BF777175 NXSI_066_C05_F NXSI (Nsf Xylem Side ... 46 0.011
gb|BV102456.1| AY531556.SNP1 Pinus pinaster megagametophyte... 46 0.011
gb|AY531556.1| Pinus pinaster putative cellulose synthase g... 46 0.011
gb|AW290811.1|AW290811 NXNV047B05F Nsf Xylem Normal wood Ve... 44 0.042
gb|BQ701506.1|BQ701506 NXSI_065_D05_F NXSI (Nsf Xylem Side ... 44 0.042
gb|CD027470.1|CD027470 NXNV047B05 Nsf Xylem Normal wood Ver... 44 0.042
gb|BE209216.1|BE209216 NXNV_147_D10_F Nsf Xylem Normal wood... 42 0.17
gb|BF516900.1|BF516900 NXSI_005_C02_F NXSI (Nsf Xylem Side ... 42 0.17
gb|BF609349.1|BF609349 NXSI_045_C06_F NXSI (Nsf Xylem Side ... 42 0.17
gb|CF478733.1|CF478733 RTWW3_16_G10.g1_A022 Well-watered lo... 42 0.17
gb|BV102457.1| AY531556.SNP2 Pinus pinaster megagametophyte... 42 0.17
>gb|AY262821.1| Pinus radiata cellulose synthase (CesA2) mRNA, partial cds
Length = 3603
Score = 400 bits (202), Expect = e-109
Identities = 817/1022 (79%)
Strand = Plus / Minus
Query: 1603 gggggctcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaact 1662
||||| ||||||| ||| || ||||| || |||||| ||| || || ||||||||||||
Sbjct: 1895 gggggatcataactatacagtgctgtcctattgaaacaacatcctgtacccacataaact 1836
Query: 1663 ggtccttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttg 1722
|| || ||||| ||||| | |||| | | || ||||| |||||||| || || |||
Sbjct: 1835 gggccctggattccatccaaacctttgagattgatatcaaaaaacactgtattgtgattg 1776
Query: 1723 gcatatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagaca 1782
||||| ||||||||||||||||||||||| ||||| || |||||||| || || || |||
Sbjct: 1775 gcataccgatcattcctatcaataccatcaaacctttgaggaaactggacgtaacaaaca 1716
Query: 1783 ctccttcctaggttaggatccataaggaagcacatagcttccctgagagccttactgttg 1842
| | || || ||||||||||| | || ||||| || || | || |||||||| ||
Sbjct: 1715 gacttcccaagattaggatccatcataaaacacatggcctcacgcagcgccttactatta 1656
Query: 1843 ttgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgag 1902
|| || |||||||||||||| || ||||||| || |||||| || || || |||||
Sbjct: 1655 tttatatagtgatcacaatcgaggttcaacagataagatccatttgtgagtactgctgaa 1596
Query: 1903 acgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttt 1962
|| ||||| | | |||||| ||||| ||||||||||| || ||||| ||||| | |||
Sbjct: 1595 acacggaccaatgaattcatagcaccggctttcttgtggtgttggaagccaggcctcttt 1536
Query: 1963 tcacgagaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactg 2022
|||||||| |||||||| | ||| ||||| ||||| || |||||||| | || ||||||
Sbjct: 1535 tcacgagacacatagactagacgtggtagttcattgccttcagtatccatccctccactg 1476
Query: 2023 tgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggt 2082
|| || | || ||||| ||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 1475 tgtcctaaaaacacctgtatcatcccaggatggtccctggtattatttccaggccaggga 1416
Query: 2083 gtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggcca 2142
|||||||||||||| | ||| || || ||||| || || || ||||| |||||||| ||
Sbjct: 1415 gtgccatcttgcataacccagccctcttcaggtaccttctgggccttcgcaacaagcgca 1356
Query: 2143 tttaccctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaat 2202
|| | || || |||||||||||||||||||||||||| |||| || ||||| |||||
Sbjct: 1355 ttgatccgaaccttgaattcttcatattctctcttcattgccctccgctcttttacaaaa 1296
Query: 2203 gaagggtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagct 2262
| ||| || |||||||||||||||||||| |||||| | ||||||||||| || ||||||
Sbjct: 1295 gtaggctgtactttgtccttcaagtaatccattttcagtgagaagtaccactctggagct 1236
Query: 2263 ctaggttcaatgttgtacttcttaacaaatggcacccattttctagcaaactctgaagtc 2322
|| ||||||||||| |||| || ||||||||||||||| || ||||| ||||||||
Sbjct: 1235 ctgggttcaatgttaaactttttgcaaaatggcacccatttccttgcaaattctgaagtt 1176
Query: 2323 tcagctagtgcatcaaatgtcagcatagcagctccatcatcagatacatagcaagagacc 2382
|| | || | || || |||| ||| || |||||||| ||||| |||||||| || |||
Sbjct: 1175 tctgaaagggattcgaaagtcaacatggctgctccatcgtcagaaacatagcaggaaacc 1116
Query: 2383 ttatccacaggatagtccacagcgagaatggatagcacggtattggcagtgacaagagga 2442
|| || |||||||| ||||||| ||||| || || || || || ||||| |||||||||
Sbjct: 1115 ttgtcaacaggataatccacagacagaatcgacagaacagtgtttgcagtaacaagagga 1056
Query: 2443 ggctccttcattgggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggc 2502
|||||||| | ||||| || ||||||||||||||||||| |||||||||||| |||||
Sbjct: 1055 ggctcctttaaagggtcaactgtactgacaaaaatgtcaatagcagccaactgtgatggt 996
Query: 2503 tcaccttcccggtcataccttaatgcgagtctatcaaggtaagtctcgcggttgattgga 2562
|||||||| |||||||| || || || || || |||||||| || || | ||||| ||
Sbjct: 995 tcaccttctcggtcatatctcaaagcaagcctgtcaaggtatgtttccctattgatgggt 936
Query: 2563 aaccactttggaaactgatccaatatccaggaaagagcaaaccagatctcacatataaca 2622
| ||| || ||||||||||||| ||||| |||| |||||||| | ||||||||| |||
Sbjct: 935 agccatttcggaaactgatccaggatccatgaaatggcaaaccaaacctcacatatcaca 876
Query: 2623 ga 2624
||
Sbjct: 875 ga 874
Score = 107 bits (54), Expect = 3e-021
Identities = 132/158 (83%)
Strand = Plus / Minus
Query: 1321 gcagactgaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattgg 1380
||||||||| ||||||| |||| ||||| || ||||| |||||||| | | |||||
Sbjct: 2186 gcagactgatgaacaccgccattctccatgagggtggatgcaacaaatacagatgattga 2127
Query: 1381 ccaaatctcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatcca 1440
|||||||| ||||| |||||| | |||||||| || || ||||||||||||||||||||
Sbjct: 2126 ccaaatcttttctctaagctcttctgagacatgagcagagatttctcatcatcaaatcct 2067
Query: 1441 gcgccttcaactccctcctctatatcttcaagattgaa 1478
|| |||||||| || || ||||||||||| ||||||||
Sbjct: 2066 gcaccttcaacgccttcttctatatcttccagattgaa 2029
Score = 95.6 bits (48), Expect = 1e-017
Identities = 207/260 (79%)
Strand = Plus / Minus
Query: 1042 gggcaatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttc 1101
|||||||| ||||||| ||| ||||| || ||||| | ||||| || || || ||||||
Sbjct: 2465 gggcaatgacggctgagaagaatttcaacagaacccaatgcccatcgaagtacttggttc 2406
Query: 1102 agacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcag 1161
| ||| || || ||||| || ||||| || || ||||| || || || ||||||||||
Sbjct: 2405 aaacgatcagaaagatttataggagcagaccctttgaatgcagggcgaggaggcatgcag 2346
Query: 1162 tagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcaca 1221
|| || || | |||||| || || ||||| || || ||||| | |||||||||||||||
Sbjct: 2345 taaatggatctccagccacgagcatgcattttaaatccagttaaaatatcttccgtcact 2286
Query: 1222 gaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaactt 1281
|||||||| ||||| ||||||||| |||||| || ||||||| || || ||||| ||
Sbjct: 2285 gaaccataaatccaaccaatctcacgtccccagtctgtcttgtcttcatacccacagcta 2226
Query: 1282 atgacatggatagcttcttt 1301
|| |||||||||||||||||
Sbjct: 2225 ataacatggatagcttcttt 2206
Score = 52.0 bits (26), Expect = 2e-004
Identities = 134/170 (78%)
Strand = Plus / Minus
Query: 622 gtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttggaggtg 681
||||| ||||||| |||| ||| || || || ||||||||||| || || || || |||
Sbjct: 2885 gtccatttgaacagatacaactctgcaaaatctccgtcttcatctgaagctttcgatgtg 2826
Query: 682 acggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggcgaag 741
|| |||||||| ||||| || |||||||| || || || | ||||||| ||| || |||
Sbjct: 2825 acagtgaagtttgtgtcaataccggcaaggactttcagcaacccctggacgactgcaaag 2766
Query: 742 aggtgggcggagatgcctccgatgacccagaactgctcgttcctccacca 791
|| || || || | ||||| ||||||||||| || || |||||||||||
Sbjct: 2765 agatgagctgacacacctccaatgacccagaattgttcattcctccacca 2716
>gb|DR059426.1|DR059426 RTNIT1_17_D03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_17_D03_A029 5', mRNA sequence
Length = 862
Score = 323 bits (163), Expect = 3e-086
Identities = 493/603 (81%)
Strand = Plus / Minus
Query: 1917 attcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacgagaaacata 1976
|||||| ||||| ||||||||||| || ||||| ||||| | ||||||||||| |||||
Sbjct: 647 attcatagcaccggctttcttgtggtgttggaagccaggcctcttttcacgagacacata 588
Query: 1977 gaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgaccaaggaaaac 2036
||| | ||| ||||| ||||| || |||||||| | || |||||||| || | || ||
Sbjct: 587 gactagacgtggtagttcattgccttcagtatccatccctccactgtgtcctaaaaacac 528
Query: 2037 ctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgcat 2096
||| ||||| |||||||||||||||||||| ||||| ||||| | ||||||||||||||
Sbjct: 527 ctgtatcatcccaggatggtccctggtattatttccaggccagagagtgccatcttgcat 468
Query: 2097 gatccatccttcctcagggactttttgtgccttagcaacaaggccatttaccctaatttt 2156
| ||| || || ||||| || || || ||||| |||||||| |||| | || || ||
Sbjct: 467 aacccagccctcttcaggtaccttctgggccttcgcaacaagcgcattgatccgaacctt 408
Query: 2157 gaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcacttt 2216
|||||||||||||||||||||||| |||| || ||||| ||||| | ||| || |||||
Sbjct: 407 gaattcttcatattctctcttcattgccctccgctcttttacaaaagtaggctgtacttt 348
Query: 2217 gtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatgtt 2276
||||||||||||||| |||||| | || |||||||| || |||||||| |||||||||||
Sbjct: 347 gtccttcaagtaatccattttcagtgaaaagtaccactctggagctctgggttcaatgtt 288
Query: 2277 gtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgcatc 2336
|||| || ||||||||||||||| || ||||| |||||||| || | || | ||
Sbjct: 287 aaactttttgcaaaatggcacccatttccttgcaaattctgaagtttctgaaagggattc 228
Query: 2337 aaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacaggata 2396
|| |||| ||| || |||||||| ||||| |||||||| || ||||| || ||||||||
Sbjct: 227 gaaagtcaacatggctgctccatcgtcagaaacatagcaggaaaccttgtcaacaggata 168
Query: 2397 gtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcattgg 2456
||||||| ||||| || || || || || ||||| ||||||||||||||||| | ||
Sbjct: 167 atccacagacagaatcgacagaacagtgtttgcagtaacaagaggaggctcctttaaagg 108
Query: 2457 gtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccggtc 2516
||| || ||||||||||||||||||| |||||||||||| ||||| |||||||| |||||
Sbjct: 107 gtcaactgtactgacaaaaatgtcaatagcagccaactgtgatggttcaccttctcggtc 48
Query: 2517 ata 2519
|||
Sbjct: 47 ata 45
>gb|AY262820.1| Pinus radiata cellulose synthase (CesA10) mRNA, complete cds
Length = 4428
Score = 280 bits (141), Expect = 4e-073
Identities = 696/881 (79%)
Strand = Plus / Minus
Query: 1630 ctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctc 1689
||||||||||| || || |||||||||||||| || || || || ||||| | ||| ||
Sbjct: 2621 ctgttgaaaacgcaccctgtgcccacataaacaggcccctgtatcccatccaaacccttc 2562
Query: 1690 aagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaatacca 1749
|| || ||||| ||||| || || || || |||||||||||||| || ||||| |||
Sbjct: 2561 aaattgatatcaaaaaagactgtattgtgattagcatatcgatcatttctgtcaatgcca 2502
Query: 1750 tcgaacctctggggaaactgaacatagcagacactccttcctaggttaggatccataagg 1809
|| ||||| || || ||||||||||| ||||| || | || || |||||||||| |
Sbjct: 2501 tcaaacctttgagggaactgaacataacagactttcttcccaagagtaggatccatcata 2442
Query: 1810 aagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattc 1869
|| ||||| || || | || ||| | |||||||| || || || ||||||||||||||
Sbjct: 2441 aaacacatggcctcacgaagggccctgctgttgtttatataatggtcacaatcaagattg 2382
Query: 1870 aacatgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcacca 1929
| ||| || | ||||||||||| || || || || || || | | |||||| ||||||
Sbjct: 2381 agcatataagggccattggtaagaactgcggaaacacgaaccaatgaattcattgcacca 2322
Query: 1930 gctttcttgtgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggt 1989
||||| ||||| || | || ||||| | ||||||||||||||||| || | || |||
Sbjct: 2321 gcttttttgtggtgttcaaaaccaggtctcttttcacgagaaacatatacaagtcgaggt 2262
Query: 1990 agctcattaccctcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattcca 2049
|| ||||| || || || ||||| |||||||| ||||| | ||| ||||| ||||| |||
Sbjct: 2261 agttcattgccatcggtgtcaagcccaccactatgacctaagaacacctgtatcatccca 2202
Query: 2050 ggatggtccctggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcc 2109
|||||||||| |||||| ||||| ||||| ||||| ||||||||||| ||||| |||||
Sbjct: 2201 ggatggtcccgggtattatttccaggccaaggtgttccatcttgcataatccagccttct 2142
Query: 2110 tcagggactttttgtgccttagcaacaaggccatttaccctaattttgaattcttcatat 2169
||||| || || || || ||||||||||| |||| | | | ||||| |||||||||
Sbjct: 2141 tcaggaaccttctgagctttagcaacaagagcattgattcggaccttgaactcttcatat 2082
Query: 2170 tctctcttcatggcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaa 2229
||||||||||| || | || ||||| ||||| ||||| |||||||| ||||||| ||
Sbjct: 2081 tctctcttcattgctctacgttcttttacaaaagaaggttgcactttatccttcagatag 2022
Query: 2230 tcaattttctgggagaagtaccattcaggagctctaggttcaatgttgtacttcttaaca 2289
|| || || || | || ||||| || ||||| || |||||||| | | || ||||||
Sbjct: 2021 tctatcttttgagcaaaataccactctggagccctgggttcaatatcaaattttttaaca 1962
Query: 2290 aatggcacccattttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcata 2349
|||||||||||||| || ||||| ||||| || |||| || || |||||||| |||||
Sbjct: 1961 aatggcacccatttccttgcaaattctgaggtttcagaaagggcttcaaatgttagcatt 1902
Query: 2350 gcagctccatcatcagatacatagcaagagaccttatccacaggatagtccacagcgaga 2409
||||||||||| ||||| ||||| || || || ||||| || ||||||||||||| |||
Sbjct: 1901 gcagctccatcgtcagacacataacatgaaactttatcaactggatagtccacagaaaga 1842
Query: 2410 atggatagcacggtattggcagtgacaagaggaggctccttcattgggtcgacagtactg 2469
|| || | || ||||| || || |||||||||||||||||||| || || || || |||
Sbjct: 1841 attgacaaaacagtatttgccgtcacaagaggaggctccttcataggatcaactgtgctg 1782
Query: 2470 acaaaaatgtcaacagcagccaactgagatggctcaccttc 2510
|||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1781 acaaaaatatcaacagcagccaactgagatggctctccttc 1741
Score = 89.7 bits (45), Expect = 8e-016
Identities = 204/257 (79%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
||||||| ||| | ||| |||||||| || || | |||||| || || || |||||||||
Sbjct: 3200 caatgcctgctaagaagaatttccacagagcccaaagcccatcgcagaacttggttcaga 3141
Query: 1105 cggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtag 1164
|| || || ||||| || ||||| ||||||||||| || || || |||||| |||||
Sbjct: 3140 cgatcagaaagattaattggagcagatcccttgaatgcagggcgaggaggcatacagtat 3081
Query: 1165 atcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaa 1224
|| || ||||| || || || ||||| || || ||||| | ||||||||| |||||||||
Sbjct: 3080 attgatcgccaaccacgagcatgcattttaaagccagtcaaaatatcttctgtcacagaa 3021
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||| ||||| |||||||| ||||||| || |||||| || || ||||| || ||
Sbjct: 3020 ccatatatccaaccaatctcttttccccaatctgacttgtcttcataaccacagctgatt 2961
Query: 1285 acatggatagcttcttt 1301
|||||||| ||||||||
Sbjct: 2960 acatggattgcttcttt 2944
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcaccca 491
||||||||||| |||||||| | ||| |||||||| || || |||||||| ||||||||
Sbjct: 3812 gtgcggttctggcgacccatcaaacctttgaggaaaggataaaggtgaacaatcaccca 3754
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| || |||||||||||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 3488 cctccaatcacccagaactgctcattcctccaccattcatcaatgccaaccccgctcca 3430
Score = 46.1 bits (23), Expect = 0.011
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 2701 cgtagcacaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttccta 2760
||||| ||||| ||||||||||| ||||| ||| |||| |||| || ||||| || ||
Sbjct: 1550 cgtagaacaatcaccatcctgtacggattgatcttggaagaagcaataggaacctttctt 1491
Query: 2761 gatagaggctggcgagtttcatc 2783
||||| |||||||| | ||||||
Sbjct: 1490 gataggggctggcgtgcttcatc 1468
>gb|AY262817.1| Pinus radiata cellulose synthase (CesA6) mRNA, partial cds
Length = 2489
Score = 208 bits (105), Expect = 1e-051
Identities = 507/641 (79%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 756 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 697
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 696 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 637
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 636 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 577
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 576 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 517
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| || | |||| || || || || ||||| ||
Sbjct: 516 tagtgatcacaatccaggttcaaaatgaatggggcatttgttagaactgcagagactcga 457
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | |||||||||
Sbjct: 456 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggtctcttttcacga 397
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
||||||||||| | || || ||||| || |||||| ||||| | | |||||| ||
Sbjct: 396 gaaacatagacaaggcgaggaagctcgttcccctcaatatcatgggctccactgcttccc 337
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
|| || ||||||||||||||||| || || | |||||||| || ||||| || || |||
Sbjct: 336 agaaacacctgaatcattccagggtgatcgcgagtattgttcccgggccagggcgttcca 277
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|| ||||| | ||| ||||| |||||| || || ||||| | ||| ||| | |||| |
Sbjct: 276 tcctgcataacccacccttcatcaggggtcttctgagcctttgaaaccagggcgtttatc 217
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggg 2208
|| | |||||| |||||||| |||| |||||||| || || ||||| ||||| | ||
Sbjct: 216 ctcactttgaactcttcatactctcgtttcatggcacgccgctcttttacaaaggtcggt 157
Query: 2209 tgcactttgtccttcaagtaatcaattttctgggagaagta 2249
||||| ||||| |||| ||||||||||||||| || |||||
Sbjct: 156 tgcaccttgtctttcaggtaatcaattttctgagaaaagta 116
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 454 agacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccg 513
|||||||||||||| || ||||| || | ||||||||| |||||||||| ||||| ||
Sbjct: 1935 agacccttgaggaagggatacagatgcaatatcacccagcaggcgaagaatagctttcca 1876
Query: 514 aagagcggaccccacgactggta 536
|| ||||| ||||| ||||||||
Sbjct: 1875 aaaagcggtccccatgactggta 1853
Score = 54.0 bits (27), Expect = 4e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| | ||| || ||||| ||||| ||||| ||||||| |
Sbjct: 1296 acctggtgcaaacgatctgataaattaataggagctgatcctttgaatgccggcctggga 1237
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 1236 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 1177
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| |||||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 1176 tctgtcaccgaaccatatatccatccgatctcctttccccattcagttttctcctcgta 1118
Score = 46.1 bits (23), Expect = 0.011
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| |||||||||||||| | ||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1632 cctccaatgacccagaactgttggtttctccagaactcttcgatgctcactccgctcca 1574
>gb|DR080401.1|DR080401 RTFEPL1_22_A02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_22_A02_A029 5', mRNA sequence
Length = 741
Score = 200 bits (101), Expect = 3e-049
Identities = 506/641 (78%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 694 tcatacccatacagagcttgcctgttgaaaacgcacccagtccccacatacactggcccc 635
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 634 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 575
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 574 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 515
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 514 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 455
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| || | |||| || || || || ||||| ||
Sbjct: 454 tagtgatcacaatccaggttcaaaatgaatggggcatttgttagaactgcagagactcga 395
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | || ||||||
Sbjct: 394 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggcctcttctcacga 335
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
||||||||||| | ||| || ||||| || |||||| ||||| | | |||||| ||
Sbjct: 334 gaaacatagacaagacgaggaagctcgttcccctcaatatcatgggctccactgcttccc 275
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
|| || ||||||||||||||||| || || | |||||||| || ||||| || || |||
Sbjct: 274 agaaacacctgaatcattccagggtgatcgcgagtattgttcccgggccagggcgttcca 215
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|| ||||| | ||| ||||| |||||| || || ||||| | ||| ||| | |||| |
Sbjct: 214 tcctgcataacccacccttcatcaggggtcttctgagcctttgaaaccagggcgtttatc 155
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggg 2208
|| | |||||| ||||| || |||| |||||||| || || ||||| ||||| | ||
Sbjct: 154 ctcactttgaactcttcgtactctcgtttcatggcacgccgctcttttacaaaggtcggt 95
Query: 2209 tgcactttgtccttcaagtaatcaattttctgggagaagta 2249
||||| ||||| |||| ||||||||||||||| || |||||
Sbjct: 94 tgcaccttgtctttcaggtaatcaattttctgagaaaagta 54
>gb|AY789651.1| Pinus taeda cellulose synthase catalytic subunit (CesA2) mRNA,
complete cds
Length = 3478
Score = 192 bits (97), Expect = 7e-047
Identities = 496/629 (78%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 1904 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 1845
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 1844 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 1785
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 1784 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 1725
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 1724 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 1665
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| || | |||| || || || || ||||| ||
Sbjct: 1664 tagtgatcacaatccaggttcaaaatgaatggggcatttgttagaactgcagagactcga 1605
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | || ||||||
Sbjct: 1604 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggtctcttctcacga 1545
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
||||||||||| | || || ||||| || |||||| ||||| | | |||||| ||
Sbjct: 1544 gaaacatagacaaggcgaggaagctcgttcccctcaatatcatgggctccactgcttccc 1485
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
|| || ||||||||||||||||| || || | |||||||| || ||||| || || |||
Sbjct: 1484 agaaacacctgaatcattccagggtgatcgcgagtattgttcccgggccagggcgttcca 1425
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|| ||||| | ||| ||||| |||||| || || ||||| | ||| ||| | |||| |
Sbjct: 1424 tcctgcataacccacccttcatcaggggtcttctgagcctttgaaaccagggcgtttatc 1365
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggg 2208
|| | |||||| |||||||| |||| |||||||| || || ||||| ||||| | ||
Sbjct: 1364 ctcactttgaactcttcatactctcgtttcatggcacgccgctcttttacaaaggtcggt 1305
Query: 2209 tgcactttgtccttcaagtaatcaatttt 2237
||||| ||||| |||| ||||||||||||
Sbjct: 1304 tgcaccttgtctttcaggtaatcaatttt 1276
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 454 agacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccg 513
|||||||||||||| || ||||| || | ||||||||| |||||||||| ||||| ||
Sbjct: 3083 agacccttgaggaagggatacagatgcaatatcacccagcaggcgaagaatagctttcca 3024
Query: 514 aagagcggaccccacgactggta 536
|| ||||| ||||| ||||||||
Sbjct: 3023 aaaagcggtccccatgactggta 3001
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| |||||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 2780 cctccaatgacccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 2722
Score = 54.0 bits (27), Expect = 4e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| | ||| || ||||| ||||| ||||| ||||||| |
Sbjct: 2444 acctggtgcaaacgatctgataaattaataggagctgatcctttgaatgccggcctggga 2385
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 2384 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 2325
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| |||||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 2324 tctgtcactgaaccatatatccatccgatctcctttccccattcagttttctcctcgta 2266
>gb|AY262818.1| Pinus radiata cellulose synthase (CesA7) mRNA, partial cds
Length = 2588
Score = 192 bits (97), Expect = 7e-047
Identities = 505/641 (78%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 977 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 918
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 917 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 858
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 857 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 798
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 797 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 738
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| | | |||| || || || || ||||| ||
Sbjct: 737 tagtgatcacaatccaggttcaaaatgaacggggcatttgttagaactgcagagactcga 678
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | || ||||||
Sbjct: 677 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggtctcttctcacga 618
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
||||||||||| | || || ||||| || |||||| ||||| | | |||||| ||
Sbjct: 617 gaaacatagacaaggcgagggagctcgttcccctcaatatcatgggctccactgcttccc 558
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
|| || ||||||||||||||||| || || | |||||||| || ||||| || || |||
Sbjct: 557 agaaacacctgaatcattccagggtgatcgcgagtattgttcccgggccagggcgttcca 498
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|| ||||| | ||| ||||| |||||| || || ||||| | ||| ||| | |||| |
Sbjct: 497 tcctgcataacccacccttcatcaggggtcttctgagcctttgaaaccagggcgtttatc 438
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggg 2208
|| | |||||| |||||||| |||| |||||||| || || ||||| ||||| | ||
Sbjct: 437 ctcactttgaactcttcatactctcgtttcatggcacgccgctcttttacaaaggtcggt 378
Query: 2209 tgcactttgtccttcaagtaatcaattttctgggagaagta 2249
||||| ||||| |||| ||||||||||||||| || |||||
Sbjct: 377 tgcaccttgtctttcaggtaatcaattttctgagaaaagta 337
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 454 agacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccg 513
|||||||||||||| || ||||| || | ||||||||| |||||||||| ||||| ||
Sbjct: 2156 agacccttgaggaagggatacagatgcaatatcacccagcaggcgaagaatagctttcca 2097
Query: 514 aagagcggaccccacgactggta 536
|| ||||| ||||| ||||||||
Sbjct: 2096 aaaagcggtccccatgactggta 2074
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| |||||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1853 cctccaatgacccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 1795
Score = 54.0 bits (27), Expect = 4e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| | ||| || ||||| ||||| ||||| ||||||| |
Sbjct: 1517 acctggtgcaaacgatctgataaattaataggagctgatcctttgaatgccggcctggga 1458
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 1457 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 1398
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| |||||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 1397 tctgtcactgaaccatatatccatccgatctcctttccccattcagttttctcctcgta 1339
>gb|AY789652.1| Pinus taeda cellulose synthase catalytic subunit (CesA3) mRNA,
complete cds
Length = 3959
Score = 186 bits (94), Expect = 5e-045
Identities = 373/466 (80%)
Strand = Plus / Minus
Query: 1645 ccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaa 1704
||||| |||||||| || || ||||| || ||||| |||||| ||| ||| ||||| ||
Sbjct: 2089 ccagttcccacatatacaggcccttgaattccatccagacctttcatgttgatatcaaag 2030
Query: 1705 aacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctgggga 1764
|| |||||||| | ||||| || || ||||| | ||||||||||||||| ||||| ||
Sbjct: 2029 aatacggtgtttcgattggcgtaacggtcattgcgatcaataccatcgaatctctgaggg 1970
Query: 1765 aactgaacatagcagacactccttcctaggttaggatccataaggaagcacatagcttcc 1824
|| || ||||| ||||| | || || | | ||||||||| | |||||||| ||||||
Sbjct: 1969 aattggacataacagacttttctcccaacctgaggatccatcataaagcacatggcttcc 1910
Query: 1825 ctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 1884
|||| ||||| |||||||| ||||||||||||||||| ||||||| ||| || | ||
Sbjct: 1909 ctgattgccttgctgttgttaatgtagtgatcacaatccagattcagcataaatggagca 1850
Query: 1885 ttggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtgatgc 1944
||||| |||||||| || || || || | ||||||||||||||| || ||||||||||||
Sbjct: 1849 ttggtgagcacagcagaaacccgaaccaaagcattcatggcaccggccttcttgtgatgc 1790
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
||||| ||||| | || |||||||||||||| || | || || |||||||| || ||
Sbjct: 1789 tggaaaccaggtctcttctcacgagaaacatatactagccgaggaagctcattgccttct 1730
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggta 2064
||||| || || ||||||||||| | ||| || || ||||| ||||||||||| | ||||
Sbjct: 1729 gtatcgaggccgccactgtgacccaagaacacttggatcataccaggatggtcacgggta 1670
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcct 2110
|| || || ||||| || || || |||||||| ||||||||||||
Sbjct: 1669 ttattaccaggccaaggcgtaccgtcttgcattgtccatccttcct 1624
Score = 121 bits (61), Expect = 2e-025
Identities = 361/461 (78%)
Strand = Plus / Minus
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
||||||||||||||||||||||||||||||||||| ||||| ||||| | || || | |
Sbjct: 1579 ttgaattcttcatattctctcttcatggcccggcgctctttgacaaaggtgggttgaaat 1520
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1519 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1460
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
| | | ||||| ||||| ||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1459 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1400
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| || ||||| | ||||| |||||||| ||||| || || || || || |||||
Sbjct: 1399 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1340
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
||||| || | || || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1339 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1280
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2514
|| || |||||||| ||||| | |||||||| || | | ||||| || ||||| ||
Sbjct: 1279 ggatccacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1220
Query: 2515 tcataccttaatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttgga 2574
|| |||||||||| |||| |||||| || || || || |||| || |||||||| |||
Sbjct: 1219 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1160
Query: 2575 aactgatccaatatccaggaaagagcaaaccagatctcaca 2615
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1159 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1119
Score = 105 bits (53), Expect = 1e-020
Identities = 188/233 (80%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 2659 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 2600
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 2599 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 2540
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
| |||||||||||| ||||| ||||| || || || || || ||||||||||| |||| |
Sbjct: 2539 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaagc 2480
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagc 1295
|| |||||||||| | ||||| || || ||||| || |||||||| |||||
Sbjct: 2479 tcttttccccattccgttttgtcttcatatccacagctgatgacatgaatagc 2427
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 3302 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 3243
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 3242 gtgcacaataacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3186
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1330 ggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatctc 1389
||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||
Sbjct: 2392 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2333
Query: 1390 ttctc 1394
|||||
Sbjct: 2332 ttctc 2328
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||||||||| || || | |||||| || || |||| ||| || ||||||
Sbjct: 2965 cctccaataacccagaactgttcatttcgccaccattcttcaatgctcactccactccac 2906
Query: 817 ctcatctccaggatacccgtggcgaagatcgagatgaagagag 859
||||| ||||| ||||| ||||| || || |||||||| ||||
Sbjct: 2905 ctcatttccagaataccagtggcaaaaattgagatgaaaagag 2863
>gb|AY262819.1| Pinus radiata cellulose synthase (CesA8) mRNA, partial cds
Length = 2287
Score = 184 bits (93), Expect = 2e-044
Identities = 468/593 (78%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 605 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 546
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 545 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 486
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 485 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 426
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 425 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 366
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| || | |||| || || || || ||||| ||
Sbjct: 365 tagtgatcacaatccaggttcaaaatgaatggggcatttgttagaactgcagagactcga 306
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | |||||||||
Sbjct: 305 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggtctcttttcacga 246
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
||||||||||| | || || ||||| || |||||| ||||| | | |||||| ||
Sbjct: 245 gaaacatagacaaggcgaggaagctcgttcccctcaatatcatgggctccactgcttccc 186
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
|| || ||||||||||||||||| || || | |||||||| || ||||| || || |||
Sbjct: 185 agaaacacctgaatcattccagggtgatcgcgagtattgttcccgggccagggcgttcca 126
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|| ||||| | ||| ||||| |||||| || || ||||| | ||| ||| | |||| |
Sbjct: 125 tcctgcataacccacccttcatcaggggtcttctgagcctttgaaaccagggcgtttatc 66
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaa 2201
|| | |||||| |||||||| |||| |||||||| || || ||||| |||||
Sbjct: 65 ctcactttgaactcttcatactctcgtttcatggcacgccgctcttttacaaa 13
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 454 agacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccg 513
|||||||||||||| || ||||| || | ||||||||| |||||||||| ||||| ||
Sbjct: 1823 agacccttgaggaagggatacagatgcaatatcacccagcaggcgaagaatagctttcca 1764
Query: 514 aagagcggaccccacgactggta 536
|| ||||| ||||| ||||||||
Sbjct: 1763 aaaagcggtccccatgactggta 1741
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| |||||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1520 cctccaatgacccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 1462
>gb|AY639654.1| Pinus radiata cellulose synthase catalytic subunit (CesA1) mRNA,
complete cds
Length = 3911
Score = 178 bits (90), Expect = 1e-042
Identities = 372/466 (79%)
Strand = Plus / Minus
Query: 1645 ccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaa 1704
||||| |||||||| || || ||||| || ||||| |||||| ||| ||| ||||| ||
Sbjct: 2099 ccagttcccacatatacaggcccttgaattccatccagacctttcatgttgatatcaaag 2040
Query: 1705 aacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctgggga 1764
|| |||||||| | ||||| || || ||||| | ||||||||||||||| ||||| ||
Sbjct: 2039 aatacggtgtttcgattggcgtaacggtcattgcgatcaataccatcgaatctctgaggg 1980
Query: 1765 aactgaacatagcagacactccttcctaggttaggatccataaggaagcacatagcttcc 1824
|| || ||||| ||||| | || || | | ||||||||| | |||||||| |||||
Sbjct: 1979 aattggacataacagacttttctcccaacctgaggatccatcataaagcacatgccttcc 1920
Query: 1825 ctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 1884
|||| ||||| |||||||| ||||||||||||||||| ||||||| ||| || | ||
Sbjct: 1919 ctgattgccttgctgttgttaatgtagtgatcacaatccagattcagcataaatggagca 1860
Query: 1885 ttggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtgatgc 1944
||||| |||||||| || || || || | ||||||||||||||| || ||||||||||||
Sbjct: 1859 ttggtgagcacagcagaaacccgaaccaaagcattcatggcaccggccttcttgtgatgc 1800
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
||||| ||||| | || |||||||||||||| || | || || |||||||| || ||
Sbjct: 1799 tggaaaccaggtctcttctcacgagaaacatatactagccgaggaagctcattgccttct 1740
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggta 2064
||||| || || ||||||||||| | ||| || || ||||| ||||||||||| | ||||
Sbjct: 1739 gtatcgaggccgccactgtgacccaagaacacttggatcataccaggatggtcacgggta 1680
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcct 2110
|| || || ||||| || || || |||||||| ||||||||||||
Sbjct: 1679 ttattaccaggccaaggcgtaccgtcttgcattgtccatccttcct 1634
Score = 121 bits (61), Expect = 2e-025
Identities = 361/461 (78%)
Strand = Plus / Minus
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
||||||||||||||||||||||||||||||||||| ||||| ||||| | || || | |
Sbjct: 1589 ttgaattcttcatattctctcttcatggcccggcgctctttgacaaaggtgggttgaaat 1530
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1529 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1470
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
| | | ||||| ||||| ||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1469 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1410
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| || ||||| | ||||| |||||||| ||||| || || || || || |||||
Sbjct: 1409 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1350
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
||||| || | || || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1349 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1290
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2514
|| || |||||||| ||||| | |||||||| || | | ||||| || ||||| ||
Sbjct: 1289 ggatctacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1230
Query: 2515 tcataccttaatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttgga 2574
|| |||||||||| |||| |||||| || || || || |||| || |||||||| |||
Sbjct: 1229 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1170
Query: 2575 aactgatccaatatccaggaaagagcaaaccagatctcaca 2615
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1169 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1129
Score = 105 bits (53), Expect = 1e-020
Identities = 188/233 (80%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 2669 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 2610
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 2609 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 2550
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
| |||||||||||| ||||| ||||| || || || || || ||||||||||| |||| |
Sbjct: 2549 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaagc 2490
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagc 1295
|| |||||||||| | ||||| || || ||||| || |||||||| |||||
Sbjct: 2489 tcttttccccattccgttttgtcttcatatccacagctgatgacatgaatagc 2437
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 3312 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 3253
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 3252 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3196
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1330 ggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatctc 1389
||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||
Sbjct: 2402 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2343
Query: 1390 ttctc 1394
|||||
Sbjct: 2342 ttctc 2338
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||||||||| || || | |||||| || || |||| ||| || ||||||
Sbjct: 2975 cctccaataacccagaactgttcatttcgccaccattcttcaatgctcactccactccac 2916
Query: 817 ctcatctccaggatacccgtggcgaagatcgagatgaagagag 859
||||| ||||| ||||| ||||| || || |||||||| ||||
Sbjct: 2915 ctcatttccagaataccagtggcaaaaattgagatgaaaagag 2873
>dbj|BD235986.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 383
Score = 172 bits (87), Expect = 7e-041
Identities = 300/371 (80%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 383 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 324
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 323 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 264
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||| | ||||||||||||||| ||||| || |||||||||||||| | || ||
Sbjct: 263 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagcacagtttcttt 204
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| || | |||||||| || || ||||| || |||| | ||||||||||||||||
Sbjct: 203 ccaagttggggatccatgagaaaacacattgcctcccgcacggccttactgttgttgaga 144
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|||||||||||||| || ||||| ||| || | |||| || || || || ||||| ||
Sbjct: 143 tagtgatcacaatccaggttcaaaatgaatggggcatttgttagaactgcagagactcga 84
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
|| || || ||||||||||| ||||||||||| ||||| ||||||| | |||||||||
Sbjct: 83 accagggcgttcatggcaccggctttcttgtggtgctgatatccaggtctcttttcacga 24
Query: 1969 gaaacatagac 1979
|||||||||||
Sbjct: 23 gaaacatagac 13
>dbj|BD236020.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 3851
Score = 170 bits (86), Expect = 3e-040
Identities = 371/466 (79%)
Strand = Plus / Minus
Query: 1645 ccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaa 1704
||||| |||||||| || || ||||| || ||||| |||||| ||| ||| ||||| ||
Sbjct: 2083 ccagttcccacatatacaggcccttgaattccatccagacctttcatgttgatatcaaag 2024
Query: 1705 aacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctgggga 1764
|| |||||||| | ||||| || || ||||| | ||||||||||||||| ||||| ||
Sbjct: 2023 aatacggtgtttcgattggcgtaacggtcattgcgatcaataccatcgaatctctgaggg 1964
Query: 1765 aactgaacatagcagacactccttcctaggttaggatccataaggaagcacatagcttcc 1824
|| || ||||| ||||| | || || | | ||||||||| | |||||||| |||||
Sbjct: 1963 aattggacataacagacttttctcccaacctgaggatccatcataaagcacatgccttcc 1904
Query: 1825 ctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtattgtcca 1884
|||| ||||| || ||||| ||||||||||||||||| ||||||| ||| || | ||
Sbjct: 1903 ctgattgccttgctattgttaatgtagtgatcacaatccagattcagcataaatggagca 1844
Query: 1885 ttggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtgatgc 1944
||||| |||||||| || || || || | ||||||||||||||| || ||||||||||||
Sbjct: 1843 ttggtgagcacagcagaaacccgaaccaaagcattcatggcaccggccttcttgtgatgc 1784
Query: 1945 tggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctca 2004
||||| ||||| | || |||||||||||||| || | || || |||||||| || ||
Sbjct: 1783 tggaaaccaggtctcttctcacgagaaacatatactagccgaggaagctcattgccttct 1724
Query: 2005 gtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggta 2064
||||| || || ||||||||||| | ||| || || ||||| ||||||||||| | ||||
Sbjct: 1723 gtatcgaggccgccactgtgacccaagaacacttggatcataccaggatggtcacgggta 1664
Query: 2065 ttgtttcctggccatggtgtgccatcttgcatgatccatccttcct 2110
|| || || ||||| || || || |||||||| ||||||||||||
Sbjct: 1663 ttattaccaggccaaggcgtaccgtcttgcattgtccatccttcct 1618
Score = 113 bits (57), Expect = 5e-023
Identities = 360/461 (78%)
Strand = Plus / Minus
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
||||||||||||||||||||||||||||| ||||| ||||| ||||| | || || | |
Sbjct: 1573 ttgaattcttcatattctctcttcatggcacggcgctctttgacaaaggtgggttgaaat 1514
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 1513 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 1454
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
| | | ||||| ||||| ||||||||||| ||||| ||||| ||||||| || |
Sbjct: 1453 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 1394
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| || ||||| | ||||| |||||||| ||||| || || || || || |||||
Sbjct: 1393 tcaaaagtaagcatcgacgctccgtcatcagagacataacaggacacattgtctacaggg 1334
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
||||| || | || || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 1333 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 1274
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2514
|| || |||||||| ||||| | |||||||| || | | ||||| || ||||| ||
Sbjct: 1273 ggatctacagtactcacaaagaggtcaacaggtgcaagcattgatggttcgccttctcgt 1214
Query: 2515 tcataccttaatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttgga 2574
|| |||||||||| |||| |||||| || || || || |||| || |||||||| |||
Sbjct: 1213 tcgtaccttaatgacagtcgatcaagatacgtttcacgactgataggcaaccacttggga 1154
Query: 2575 aactgatccaatatccaggaaagagcaaaccagatctcaca 2615
|||||||| | ||||| || | ||||||||||| |||||
Sbjct: 1153 aactgatcaagaatccatgacaaggcaaaccagatttcaca 1113
Score = 105 bits (53), Expect = 1e-020
Identities = 188/233 (80%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 2653 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 2594
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 2593 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 2534
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
| |||||||||||| ||||| ||||| || || || || || ||||||||||| |||| |
Sbjct: 2533 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaagc 2474
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagc 1295
|| |||||||||| | ||||| || || ||||| || |||||||| |||||
Sbjct: 2473 tcttttccccattccgttttgtcttcatatccacagctgatgacatgaatagc 2421
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 3296 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 3237
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 3236 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 3180
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1330 ggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatctc 1389
||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||
Sbjct: 2386 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 2327
Query: 1390 ttctc 1394
|||||
Sbjct: 2326 ttctc 2322
Score = 46.1 bits (23), Expect = 0.011
Identities = 83/103 (80%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||||||||| || || | |||||| || || |||| ||| || ||||||
Sbjct: 2959 cctccaataacccagaactgttcatttcgccaccattcttcaatgctcactccactccac 2900
Query: 817 ctcatctccaggatacccgtggcgaagatcgagatgaagagag 859
||||| | ||| ||||| ||||| || || |||||||| ||||
Sbjct: 2899 ctcattttcagaataccagtggcaaaaattgagatgaaaagag 2857
>gb|DR384721.1|DR384721 RTHG1_4_D04.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_4_D04_A029 3', mRNA sequence
Length = 749
Score = 168 bits (85), Expect = 1e-039
Identities = 378/476 (79%)
Strand = Plus / Plus
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
||||| ||||| || |||||||| | || ||||| ||||||||||| || |||||||||
Sbjct: 13 acctggatcatccccggatggtctcgagtgttgttgcctggccatggagttccatcttgc 72
Query: 2095 atgatccatccttcctcagggactttttgtgccttagcaacaaggccatttaccctaatt 2154
||| ||||||| || || || ||||| || || || || ||||| |||| | || ||
Sbjct: 73 atggtccatccctcttctggcactttntgcgctttggccacaagagcattaatccggatc 132
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
||| | ||||||||||| |||||||| || | || ||||||||||| ||||| || |||
Sbjct: 133 ttgtactcttcatattccctcttcattgctctccgttctttaacaaaggaaggctgtact 192
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|| |||||||| |||||||| ||||||| ||||| |||| ||||| || || || ||
Sbjct: 193 ttatccttcaaataatcaatcttctgggcaaagtagaattctggagccctgggctcgata 252
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
|||| || || |||||||||||| || || || || |||||||| || | || |
Sbjct: 253 ctgtattttttgcaaaatggcacccacttccttgcgaattctgaagtttctgaaagggtt 312
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| |||| ||| || |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 313 tcaaaagtcaacattgccgctccatcatcagaaacatagcatgaaactttatcgacagga 372
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
|| ||||| || || || || || || ||||| || |||||||||||||||||||| |
Sbjct: 373 taatccacggcaaggatagacagaacagtatttgctgtgacaagaggaggctcctttaga 432
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttc 2510
|| || || |||||||||||||| |||||| | ||||||||||||||||| |||||
Sbjct: 433 ggatccactgtactgacaaaaatatcaacaccggccaactgagatggctctccttc 488
>gb|CO201610.1|CO201610 RTCNT2_7_A01.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_A01_A029 3', mRNA sequence
Length = 681
Score = 137 bits (69), Expect = 4e-030
Identities = 300/377 (79%)
Strand = Plus / Plus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| || ||||| || ||||| |||||||| || |||| ||| ||||| ||||||||
Sbjct: 59 atttcaacagaaccaagggcccatcggagcacttgattcaaacgatctgaaagattgatt 118
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
|| || ||||||||||| || || || |||||||||||| || || |||||||||
Sbjct: 119 ggtgcagatcccttgaatgcaggacgtgcaggcatgcagtatattgaaatccagcctcga 178
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
|| ||||| || |||||||| | ||||||||| || ||||||||||| ||||||||||||
Sbjct: 179 gcatgcattttaaacccagtcaaaatatcttctgtgacagaaccataaatccacccaatc 238
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttc 1302
|| |||||||||| |||||| || || ||||| || || ||||| || |||||||||
Sbjct: 239 tcttttccccattctgacttgtcttcatatccacagctgataacatgaatggcttctttc 298
Query: 1303 agaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtggacgca 1362
| | ||| | ||| ||||||| || |||| |||||||| |||||| || || || |
Sbjct: 299 aataaagaagcaggattcgcagattgtggaagaccaccattttccatgagggtagattga 358
Query: 1363 acaaaagctgcagattggccaaatctcttctccaagctcatttgagacataagaagtgat 1422
| ||| | | ||||| |||||||| ||||| |||||| |||| ||||| || | ||||
Sbjct: 359 ataaacaccggtgattgaccaaatcttttctctaagctcctttgggacatgagcaatgat 418
Query: 1423 ttctcatcatcaaatcc 1439
|||||||||||||||||
Sbjct: 419 ttctcatcatcaaatcc 435
>gb|DR686101.1|DR686101 EST1076179 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABC32 3' end, mRNA sequence
Length = 737
Score = 127 bits (64), Expect = 4e-027
Identities = 292/368 (79%)
Strand = Plus / Minus
Query: 1072 gaaccgagagcccaccggagcacctggttcagacggtctgagagattgatgggagccgat 1131
||||| || ||||| |||||||| || |||| ||| ||||| |||||||| || || |||
Sbjct: 731 gaaccaagggcccatcggagcacttgattcaaacgatctgaaagattgattggtgcagat 672
Query: 1132 cccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatc 1191
|||||||| || || || ||| |||||||| || || ||||||||| || |||||
Sbjct: 671 cccttgaatgcaggacgtgcaggtatgcagtatattgaaatccagcctcgagcatgcatt 612
Query: 1192 ttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatctcagttccc 1251
|| |||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||
Sbjct: 611 ttaaacccagtcaaaatatcttctgtgacagaaccataaatccacccaatctcttttccc 552
Query: 1252 cattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttcagaagagat 1311
||||| |||||| || || ||||| || || ||||| || |||||||||| | |||
Sbjct: 551 cattctgacttgtcttcatatccacagctgataacatgaatggcttctttcaataaagaa 492
Query: 1312 tccggagtcgcagactgaggaacaccaccatattccatcagagtggacgcaacaaaagct 1371
| ||| ||||||| || |||| |||||||| |||||| || || || || ||| |
Sbjct: 491 gcaggattcgcagattgtggaagaccaccattttccatgagggtagattgaataaacacc 432
Query: 1372 gcagattggccaaatctcttctccaagctcatttgagacataagaagtgatttctcatca 1431
| ||||| |||||||| ||||| |||||| |||| ||||| || | |||||||||||||
Sbjct: 431 ggtgattgaccaaatcttttctctaagctcctttgggacatgagcaatgatttctcatca 372
Query: 1432 tcaaatcc 1439
||||||||
Sbjct: 371 tcaaatcc 364
Score = 71.9 bits (36), Expect = 2e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 1651 cccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaaaacacg 1710
||||||||||| || |||||||| ||||| | |||||||||| | ||||| || |||||
Sbjct: 146 cccacataaacaggcccttggataccatcgaaacctctcaaggtgatatcaaagaacaca 87
Query: 1711 gtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctggggaaactga 1770
||||| | || ||||||||||| | | |||||| ||||| || ||||| ||||||||
Sbjct: 86 gtgttacgattagcatatcgatcgtgtcgatcaatgccatcaaatctctgaggaaactgt 27
Query: 1771 acatagca 1778
||||||||
Sbjct: 26 acatagca 19
>gb|DR744890.1|DR744890 RTCU1_25_C12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_25_C12_A029 5', mRNA sequence
Length = 754
Score = 123 bits (62), Expect = 6e-026
Identities = 143/170 (84%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 208 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 149
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 148 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 89
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagca 1778
||||||| | ||||||||||||||| ||||| || ||||||||||||||
Sbjct: 88 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagca 39
Score = 54.0 bits (27), Expect = 4e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| | ||| || ||||| ||||| ||||| ||||||| |
Sbjct: 748 acctggtgcaaacgatctgataaattaataggagctgatcctttgaatgccggcctggga 689
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 688 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 629
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| |||||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 628 tctgtcactgaaccatatatccatccgatctcctttccccattcagttttctcctcgta 570
>gb|AY262816.1| Pinus radiata cellulose synthase (CesA5) mRNA, partial cds
Length = 1989
Score = 123 bits (62), Expect = 6e-026
Identities = 143/170 (84%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 198 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 139
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 138 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 79
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagca 1778
||||||| | ||||||||||||||| ||||| || ||||||||||||||
Sbjct: 78 cgatcatggcgatcaataccatcgaatctctgagggaactgaacatagca 29
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 454 agacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccg 513
|||||||||||||| || ||||| || | ||||||||| |||||||||| ||||| ||
Sbjct: 1377 agacccttgaggaagggatacagatgcaatatcacccagcaggcgaagaatagctttcca 1318
Query: 514 aagagcggaccccacgactggta 536
|| ||||| ||||| ||||||||
Sbjct: 1317 aaaagcggtccccatgactggta 1295
Score = 54.0 bits (27), Expect = 4e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctcca 815
||||| |||||||||||||| ||||| ||||| |||| ||||||| ||| ||||||||
Sbjct: 1074 cctccaatgacccagaactgttcgtttctccagaactcttcgatgctcactccgctcca 1016
Score = 54.0 bits (27), Expect = 4e-005
Identities = 141/179 (78%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| | ||| || ||||| ||||| ||||| ||||||| |
Sbjct: 738 acctggtgcaaacgatctgataaattaataggagctgatcctttgaatgccggcctgaga 679
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 678 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 619
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| |||||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 618 tctgtcaccgaaccatatatccatccgatctcctttccccattcagttttctcctcgta 560
>gb|BX682714.1|BX682714 BX682714 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 120E04 similar to Cellulose synthase, mRNA
sequence
Length = 431
Score = 119 bits (60), Expect = 9e-025
Identities = 231/288 (80%)
Strand = Plus / Minus
Query: 1152 aggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatc 1211
|||||||||||| || || ||||||||| || ||||| || |||||||| | ||||||
Sbjct: 360 aggcatgcagtatattgaaatccagcctcgagcatgcattttaaacccagtcaaaatatc 301
Query: 1212 ttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
||| || ||||||||||| |||||||||||||| |||||||||| |||||| || ||
Sbjct: 300 ttctgtgacagaaccataaatccacccaatctcttttccccattctgacttgtcttcata 241
Query: 1272 gccacaacttatgacatggatagcttctttcagaagagattccggagtcgcagactgagg 1331
||||| || || ||||| || |||||||||| | ||| | ||| ||||||| || ||
Sbjct: 240 tccacagctgataacatgaatggcttctttcaataaagaagcaggattcgcagattgtgg 181
Query: 1332 aacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatctctt 1391
|| |||||||| |||||| || || || || ||| ||| ||||| |||||||| ||
Sbjct: 180 aagaccaccattttccatgagggtagattgaataaacactggtgattgaccaaatctttt 121
Query: 1392 ctccaagctcatttgagacataagaagtgatttctcatcatcaaatcc 1439
||| |||||| |||| ||||| || | |||||||||||||||||||||
Sbjct: 120 ctctaagctcctttgggacatgagcaatgatttctcatcatcaaatcc 73
>gb|AW010875.1|AW010875 ST12E01 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST12E01, mRNA sequence
Length = 386
Score = 117 bits (59), Expect = 3e-024
Identities = 133/158 (84%)
Strand = Plus / Minus
Query: 1321 gcagactgaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattgg 1380
||||||||| |||||||||||| ||||| || ||||| |||||||| | | |||||
Sbjct: 198 gcagactgatgaacaccaccattctccatgagggtggatgcaacaaatacggatgattga 139
Query: 1381 ccaaatctcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatcca 1440
|||||||| ||||| |||||| | |||||||| || || ||||||||||||||||||||
Sbjct: 138 ccaaatcttttctctaagctcttntgagacatgagcagagatttctcatcatcaaatcct 79
Query: 1441 gcgccttcaactccctcctctatatcttcaagattgaa 1478
|| |||||||| || || ||||||||||| ||||||||
Sbjct: 78 gcaccttcaacgccttcttctatatcttccagattgaa 41
Score = 52.0 bits (26), Expect = 2e-004
Identities = 78/96 (81%)
Strand = Plus / Minus
Query: 1206 aatatcttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtc 1265
||||||| |||||| || ||||| ||||| ||||||||| |||||| || |||||||
Sbjct: 314 aatatctcccgtcantgacccataaatccaaccaatctcacgtccccagtctgtcttgtc 255
Query: 1266 ctcgtagccacaacttatgacatggatagcttcttt 1301
|| || ||||| | || |||||||||||||||||
Sbjct: 254 ttcatacccacagntaataacatggatagcttcttt 219
>gb|CO369942.1|CO369942 RTK1_55_A04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_55_A04_A029 5', mRNA sequence
Length = 695
Score = 117 bits (59), Expect = 3e-024
Identities = 230/287 (80%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| || ||||| || ||||| |||||||| || |||| ||| ||||| ||||||||
Sbjct: 314 atttcaacagaaccaagggcccatcggagcacttgattcaaacgatctgaaagattgatt 255
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
|| || ||||||||||| || || || |||||||||||| || || |||||||||
Sbjct: 254 ggtgcagatcccttgaatgcaggacgtgcaggcatgcagtatattgaaatccagcctcga 195
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
|| ||||| || |||||||| | ||||||||| || ||||||||||| ||||||||||||
Sbjct: 194 gcatgcattttaaacccagtcaaaatatcttctgtgacagaaccataaatccacccaatc 135
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttc 1302
|| |||||||||| |||||| || || ||||| || || ||||| || |||||||||
Sbjct: 134 tcttttccccattctgacttgtcttcatatccacagctgataacatgaatggcttctttc 75
Query: 1303 agaagagattccggagtcgcagactgaggaacaccaccatattccat 1349
| | ||| | ||| ||||||| || |||| |||||||| ||||||
Sbjct: 74 aataaagaagcaggattcgcagattgtggaagaccaccattttccat 28
>gb|BX249248.1|BX249248 BX249248 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP021G11 similar to Cellulose synthase
catalytic subunit, mRNA sequence
Length = 708
Score = 111 bits (56), Expect = 2e-022
Identities = 137/164 (83%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 164 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 105
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 104 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 45
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaac 1772
||||||| | ||||||||||||||| ||||| || ||||||||
Sbjct: 44 cgatcatggcgatcaataccatcgaatctctgagggaactgaac 1
Score = 48.1 bits (24), Expect = 0.003
Identities = 142/180 (78%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
||||||| || ||| ||||| ||||| || ||||| ||||| ||||| ||||||| |
Sbjct: 706 acctggtgcaaacgatctgatagattaataggagctgatcctttgaatgccggcctggga 647
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
||||||||||| | ||| ||||| || || |||||| ||||| || || || |||||
Sbjct: 646 ggcatgcagtataccgatcgccaaccacggcagtgcattttgaagcctgtcaggatatcc 587
Query: 1213 tccgtcacagaa-ccatagatccacccaatctcagttccccattcaatcttgtcctcgta 1271
|| ||||| ||| ||||| ||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 586 tctgtcactgaaaccatatatccatccgatctcctttccccattcagttttctcctcgta 527
>gb|BE657157.1|BE657157 NXCI_064_G04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_064_G04 5' similar to Arabidopsis
thaliana sequence At4g18780 cellulose synthase catalytic
subunit (IRX1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 463
Score = 111 bits (56), Expect = 2e-022
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 367 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 308
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 307 atgcagtaaatggagcgccaccctcgnnagtgcatcttgaaacctgttagaatgtcttct 248
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 247 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 188
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 187 cagctgatcacatgtatagcttcttt 162
>gb|AA556640.1|AA556640 495 Loblolly pine C Pinus taeda cDNA clone 2C7G, mRNA sequence
Length = 537
Score = 109 bits (55), Expect = 8e-022
Identities = 261/331 (78%)
Strand = Plus / Minus
Query: 2155 ttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcact 2214
|||||||||||||||| | |||||||||||||||| ||||| ||||| | || || | |
Sbjct: 352 ttgaattcttcatattntntcttcatggcccggcgntctttgacaaaggtgggttgaaat 293
Query: 2215 ttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaatg 2274
|||||||||| || ||||||||||| ||||| || ||| ||||| | ||| ||||||
Sbjct: 292 ttgtccttcagatagtcaattttctgagagaaatagatttcgggagcgcgaggctcaatg 233
Query: 2275 ttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagctagtgca 2334
| | | ||||| ||||| ||||||||||| ||||| ||||| ||||||| || |
Sbjct: 232 tcgaatttcttgcagaatggtacccattttctggcaaattctgaggtctcagagagagat 173
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
||||| || ||||| | ||||| |||||||| ||||| || || || || || |||||
Sbjct: 172 tcaaaagtaagcatngacgctccgtcatcagagacataacaggacacattgtctacaggg 113
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
||||| || | || || |||| || ||||||||||| || | |||||||||||||| |
Sbjct: 112 tagtctactgaaaggattgataatactgtattggcagtaaccaaaggaggctccttcagt 53
Query: 2455 gggtcgacagtactgacaaaaatgtcaacag 2485
|| || |||||||| ||||| | ||||||||
Sbjct: 52 ggatccacagtactcacaaagaggtcaacag 22
>gb|AW985306.1|AW985306 NXNV_135_F04_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_135_F04 5' similar to Arabidopsis thaliana sequence
At5g44030 cellulose synthase catalytic subunit-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 418
Score = 107 bits (54), Expect = 3e-021
Identities = 139/168 (82%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||| ||||| |||||| ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 168 tcatacccatacagagcttgcctgttgaaaacgcatccagtccccacatacactggcccc 109
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
||||||||||| ||||| ||| ||| |||||||| || || ||||| ||||| ||||||
Sbjct: 108 tggatgccatctagacccttcatgttgatatcgaagaaaacagtgtttctgtttgcatat 49
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatag 1776
||||||| | ||||||||||||||| ||| || ||||||||||||
Sbjct: 48 cgatcatggcgatcaataccatcgaatnnctgagggaactgaacatag 1
>gb|BE996873.1|BE996873 NXCI_103_E08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_103_E08 5' similar to Arabidopsis
thaliana sequence At5g44030 cellulose synthase catalytic
subunit-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 363
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 236 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 177
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 176 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 117
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 116 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 57
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 56 cagctgatcacatgtatagcttcttt 31
>gb|CF668299.1|CF668299 RTCNT1_35_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D11_A029 5', mRNA sequence
Length = 769
Score = 107 bits (54), Expect = 3e-021
Identities = 315/402 (78%)
Strand = Plus / Minus
Query: 1836 actgttgttgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcac 1895
||||||||||| |||||||||||||| || ||||| ||| || | |||| || || ||
Sbjct: 769 actgttgttgagatagtgatcacaatccaggttcaaaatgaatggggcatttgttagaac 710
Query: 1896 agctgagacgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccagg 1955
|| ||||| || || || || ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 709 tgcagagactcgaaccagggcgttcatggcaccggctttcttgtggtgctgatatccagg 650
Query: 1956 acgtttttcacgagaaacatagaccaaacggggtagctcattaccctcagtatcaagacc 2015
| || ||||||||||||||||| | || || ||||| || |||||| ||||| | |
Sbjct: 649 tctcttctcacgagaaacatagacaaggcgaggaagctcgttcccctcaatatcatgggc 590
Query: 2016 accactgtgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctgg 2075
|||||| || || || ||||||||||||||||| || || | |||||||| || ||
Sbjct: 589 tccactgcttcccagaaacacctgaatcattccagggtgatcgcgagtattgttcccggg 530
Query: 2076 ccatggtgtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaac 2135
||| || || ||||| ||||| | ||| ||||| |||||| || || ||||| | |||
Sbjct: 529 ccagggcgttccatcctgcataacccacccttcatcaggggtcttctgagcctttgaaac 470
Query: 2136 aaggccatttaccctaattttgaattcttcatattctctcttcatggcccggcggtcttt 2195
||| | |||| ||| | |||||| ||||||||||||| |||||||| || || |||||
Sbjct: 469 cagggcgtttatcctcactttgaactcttcatattctcgtttcatggcacgccgctcttt 410
Query: 2196 aacaaatgaagggtgcactttgtccttcaagtaatcaatttt 2237
||||| | || ||||| ||||| |||| ||||||||||||
Sbjct: 409 tacaaaggtcggttgcaccttgtctttcaggtaatcaatttt 368
>gb|CF672886.1|CF672886 RTCNT1_74_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_74_D05_A029 5', mRNA sequence
Length = 763
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 444 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 385
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 384 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 325
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 324 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 265
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 264 cagctgatcacatgtatagcttcttt 239
>gb|CX646526.1|CX646526 COLD1_9_H07.g1_A029 Root cold Pinus taeda cDNA clone COLD1_9_H07_A029
5', mRNA sequence
Length = 853
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 225 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 166
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 165 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 106
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 105 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 46
Query: 1276 caacttatgacatggatagcttcttt 1301
||| | || ||||| |||||||||||
Sbjct: 45 caaatgatcacatgtatagcttcttt 20
Score = 48.1 bits (24), Expect = 0.003
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||| ||||| |||||||||||||| || ||||||| ||| || |||||
Sbjct: 567 cctccaatcacccaaaactgttcgttcctccaccattcttcgatgctcactccactccat 508
Query: 817 ctca 820
||||
Sbjct: 507 ctca 504
>gb|DR054410.1|DR054410 RTCA1_17_D10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_17_D10_A029 3', mRNA sequence
Length = 821
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Plus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 507 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 566
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 567 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 626
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 627 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 686
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 687 cagctgatcacatgtatagcttcttt 712
Score = 48.1 bits (24), Expect = 0.003
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||| ||||| |||||||||||||| || ||||||| ||| || |||||
Sbjct: 165 cctccaatcacccaaaactgttcgttcctccaccattcttcgatgctcactccactccat 224
Query: 817 ctca 820
||||
Sbjct: 225 ctca 228
>gb|DR110920.1|DR110920 RTS1_14_B08.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_14_B08_A029 3', mRNA sequence
Length = 632
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Plus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 301 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 360
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 361 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 420
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 421 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 480
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 481 cagctgatcacatgtatagcttcttt 506
>dbj|BD235989.1| Materials and method for modification of plant cell wall
polysaccharides
Length = 619
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 324 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 265
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 264 atgcagtaaatggagcgccatcctcggcagtgcatcttgaaacctgttagaatgtcttct 205
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 204 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 145
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 144 cagctgatcacatgtatagcttcttt 119
>gb|AY789650.1| Pinus taeda cellulose synthase catalytic subunit (CesA1) mRNA,
complete cds
Length = 3127
Score = 107 bits (54), Expect = 3e-021
Identities = 168/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || | ||| |||
Sbjct: 2186 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtctcttgggc 2127
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 2126 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 2067
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 2066 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 2007
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 2006 cagctgatcacatgtatagcttcttt 1981
Score = 75.8 bits (38), Expect = 1e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 1645 ccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaatatcgaaa 1704
||||| |||||||| ||||| |||||||||||||| | || ||| ||| ||||||||
Sbjct: 1646 ccagtacccacatacactggcccttggatgccatccaatcccttcatgttgatatcgaag 1587
Query: 1705 aacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctctgggga 1764
||||| ||||| | |||||||||||||| | | ||| ||||||||||||||||| ||
Sbjct: 1586 aacacagtgtttcgattggcatatcgatcgctgcgatcgataccatcgaacctctgtggg 1527
Query: 1765 aactgaacatagca 1778
||||| || |||||
Sbjct: 1526 aactgcacgtagca 1513
Score = 73.8 bits (37), Expect = 5e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 2356 ccatcatcagatacatagcaagagaccttatccacaggatagtccacagcgagaatggat 2415
||||| ||||| ||||||||||| || || |||||||| || |||||||| ||||||||
Sbjct: 935 ccatcgtcagagacatagcaagaaactttctccacagggtaatccacagccagaatggac 876
Query: 2416 agcacggtattggcagtgacaagaggaggctccttcattgggtcgacagtact 2468
|| ||||| ||||| || || | ||||||||| |||| |||||| || |||||
Sbjct: 875 agaacggtgttggccgtaactaaaggaggctctttcagtgggtccacggtact 823
Score = 71.9 bits (36), Expect = 2e-010
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 372 aacccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcgg 431
||||||||||| ||||| || ||||||| |||||| | ||| | || |||||||| ||
Sbjct: 2910 aacccacagcagagagaaaatagacgccaacaggatagaccacaatacaacgatggtagg 2851
Query: 432 ggtgcggttctgccgacccatgagacccttgaggaa 467
|||||||| ||||||||||||||||| ||||||||
Sbjct: 2850 cgtgcggttttgccgacccatgagacctttgaggaa 2815
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 2548 tcgcggttgattggaaaccactttggaaactgatccaatatccaggaaagagcaaaccag 2607
||||| ||||| ||| |||||| ||||||||||| | |||||||| | ||| ||||||
Sbjct: 743 tcgcgattgatcggattccacttgggaaactgatcaagaatccaggataaagcgaaccag 684
Query: 2608 atctcacatataac 2621
|||||||| |||||
Sbjct: 683 atctcacaaataac 670
Score = 50.1 bits (25), Expect = 7e-004
Identities = 103/129 (79%)
Strand = Plus / Minus
Query: 2148 cctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagg 2207
||||| |||| |||| || || ||||| ||||| || ||||| || || ||||| |||
Sbjct: 1143 cctaactttgtattcctcgtactctcttttcattgctcggcgctccttgacaaagttagg 1084
Query: 2208 gtgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctagg 2267
||||| ||||| ||||||||||| | |||| | |||||||| |||||||||||| |||
Sbjct: 1083 ctgcaccttgtctttcaagtaatcgactttcagagagaagtagaattcaggagctcgagg 1024
Query: 2268 ttcaatgtt 2276
|| |||||
Sbjct: 1023 ctcgatgtt 1015
Score = 48.1 bits (24), Expect = 0.003
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||| ||||| |||||||||||||| || ||||||| ||| || |||||
Sbjct: 2528 cctccaatcacccaaaactgttcgttcctccaccattcttcgatgctcactccactccat 2469
Query: 817 ctca 820
||||
Sbjct: 2468 ctca 2465
>gb|AW697996.1|AW697996 NXNV_079_C07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_079_C07 5' similar to Arabidopsis thaliana
sequence At5g17420 cellulose synthase catalytic subunit
(IRX3) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 105 bits (53), Expect = 1e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 397 gccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgaga 456
|||||||| || | ||||| |||||||||||| || || |||||||||| |||||||||
Sbjct: 154 gccagcagaattgaccagataaccacgatggtgggtgttcggttctgcctgcccatgaga 95
Query: 457 cccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaag 516
||||||||||| || |||||||| || || |||||||| || ||||| ||||| || |||
Sbjct: 94 cccttgaggaaaggatacaggtgcacaatgacccagaatgcaaagaaaagcttacccaag 35
Query: 517 agcggaccccacgactg 533
|| |||||||| |||||
Sbjct: 34 agaggaccccatgactg 18
>gb|AH014290.1|SEG_AY764673S Pinus taeda isolate 11 cellulose synthase genes, partial cds
Length = 1023
Score = 105 bits (53), Expect = 1e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 397 gccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgaga 456
|||||||| || | ||||| |||||||||||| || || |||||||||| |||||||||
Sbjct: 864 gccagcagaattgaccagataaccacgatggtgggtgttcggttctgcctgcccatgaga 805
Query: 457 cccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaag 516
||||||||||| || |||||||| || || |||||||| || ||||| ||||| || |||
Sbjct: 804 cccttgaggaaaggatacaggtgcacaatgacccagaatgcaaagaaaagcttacccaag 745
Query: 517 agcggaccccacgactg 533
|| |||||||| |||||
Sbjct: 744 agaggaccccatgactg 728
Score = 91.7 bits (46), Expect = 2e-016
Identities = 145/178 (81%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 453 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 394
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 393 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 334
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
| |||||||||||| ||||| ||||| || || || || || ||||||||||| ||||
Sbjct: 333 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaa 276
>gb|AY764674.1|AY764673S2 Pinus taeda isolate 11 cellulose synthase gene, partial cds
Length = 452
Score = 105 bits (53), Expect = 1e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 397 gccagcaggatcgcccagacaaccacgatggtcggggtgcggttctgccgacccatgaga 456
|||||||| || | ||||| |||||||||||| || || |||||||||| |||||||||
Sbjct: 293 gccagcagaattgaccagataaccacgatggtgggtgttcggttctgcctgcccatgaga 234
Query: 457 cccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaag 516
||||||||||| || |||||||| || || |||||||| || ||||| ||||| || |||
Sbjct: 233 cccttgaggaaaggatacaggtgcacaatgacccagaatgcaaagaaaagcttacccaag 174
Query: 517 agcggaccccacgactg 533
|| |||||||| |||||
Sbjct: 173 agaggaccccatgactg 157
>gb|BE187012.1|BE187012 NXNV_157_H10_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_157_H10 5' similar to Arabidopsis thaliana sequence
At4g18780 cellulose synthase catalytic subunit (IRX1) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 477
Score = 103 bits (52), Expect = 5e-020
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| || || ||| |||
Sbjct: 325 tggtgcagacgatctgatagattgataggagcagaccccttgaatgctggtnncttgggc 266
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 265 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 206
Query: 1216 gtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagcca 1275
|||||||||||||||||||| || | ||| | |||||||| | || || |||||||||
Sbjct: 205 gtcacagaaccatagatccatccgacctctttcccccattcggttttctcttcgtagcca 146
Query: 1276 caacttatgacatggatagcttcttt 1301
|| || || ||||| |||||||||||
Sbjct: 145 cagctgatcacatgtatagcttcttt 120
>gb|BV079715.1| Pp_CesA3 Pinus pinaster megagametophytes Pinus pinaster STS genomic,
sequence tagged site
Length = 488
Score = 103 bits (52), Expect = 5e-020
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 1096 tggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggc 1155
|||| |||||| ||||| |||||||| ||||| || |||||||| ||||| | ||| |||
Sbjct: 395 tggtgcagacgatctgatagattgataggagcagaccccttgaatgccggtctcttgggc 336
Query: 1156 atgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttcc 1215
|||||||| || || ||||| ||||| |||||||||||| || || ||||| |||||
Sbjct: 335 atgcagtaaatggagcgccaccctcggcagtgcatcttgaaacctgttagaatgtcttct 276
Query: 1216 gtcacagaaccatagatcca 1235
||||||||||||||||||||
Sbjct: 275 gtcacagaaccatagatcca 256
>gb|BQ196805.1|BQ196805 NXLV105_E07_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV105_E07 5' similar to Arabidopsis thaliana
sequence At4g32410 cellulose synthase catalytic subunit
(RSW1) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 758
Score = 101 bits (51), Expect = 2e-019
Identities = 201/251 (80%)
Strand = Plus / Minus
Query: 1099 ttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatg 1158
|||| ||| ||||| |||||||| || || ||||||||||| || || || |||||||
Sbjct: 326 ttcaaacgatctgaaagattgattggtgcagatcccttgaatgcaggacgtgcaggcatg 267
Query: 1159 cagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtc 1218
||||| || || ||||||||| || ||||| || |||||||| | ||||||||| ||
Sbjct: 266 cagtatattgaaatccagcctcgagcatgcattttaaacccagtcaaaatatcttctgtg 207
Query: 1219 acagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaa 1278
||||||||||| |||||||||||||| |||||||||| |||||| || || |||||
Sbjct: 206 acagaaccataaatccacccaatctcttttccccattctgacttgtcttcatatccacag 147
Query: 1279 cttatgacatggatagcttctttcagaagagattccggagtcgcagactgaggaacacca 1338
|| || ||||| || |||||||||| | ||| | ||| ||||||| || |||| ||||
Sbjct: 146 ctgataacatgaatggcttctttcaataaagaagcaggattcgcagattgtggaagacca 87
Query: 1339 ccatattccat 1349
|||| ||||||
Sbjct: 86 ccattttccat 76
>gb|BG317558.1|BG317558 NXPV_003_B08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_003_B08 5' similar to Arabidopsis
thaliana sequence At5g05170 cellulose synthase catalytic
subunit (Ath-B) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 536
Score = 99.6 bits (50), Expect = 8e-019
Identities = 187/233 (80%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||| ||||||| ||||||||| ||||||||
Sbjct: 372 atttctactgatcccaaagcccaacgcaacacntggttcaaacggtctgatagattgatt 313
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 312 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 253
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
| |||||||||||| ||||| ||||| || || || || || ||||||||||| |||| |
Sbjct: 252 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaagc 193
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagc 1295
|| |||||||||| | ||||| || || ||||| || |||||||| |||||
Sbjct: 192 tcttttccccattccgttttgtcttcatatccacagctgatgacatgaatagc 140
Score = 58.0 bits (29), Expect = 3e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1330 ggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaatctc 1389
||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||
Sbjct: 105 ggaacaccaccattctccatcagagtggattgaacaaaagctgaagactggccaaacttc 46
Query: 1390 ttctc 1394
|||||
Sbjct: 45 ttctc 41
>gb|DR118589.1|DR118589 RTMG1_18_A07.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_18_A07_A029 3', mRNA sequence
Length = 610
Score = 99.6 bits (50), Expect = 8e-019
Identities = 158/194 (81%)
Strand = Plus / Plus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 387 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 446
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 447 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 506
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
| |||||||||||| ||||| ||||| || || || || || ||||||||||| |||| |
Sbjct: 507 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaagc 566
Query: 1243 tcagttccccattc 1256
|| ||||||||||
Sbjct: 567 tcttttccccattc 580
Score = 54.0 bits (27), Expect = 4e-005
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||||||||| || || | |||||| || || |||| ||| || ||||||
Sbjct: 81 cctccaataacccagaactgttcatttcgccaccattcttcaatgctcactccactccac 140
Query: 817 ctcatctccaggatacccgtggcgaagatcgagatgaagagag 859
||||| ||||| ||||| ||||| || || |||||||| ||||
Sbjct: 141 ctcatttccagaataccagtggcaaaaattgagatgaaaagag 183
>gb|BG039685.1|BG039685 NXSI_102_H08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_102_H08 5' similar to Arabidopsis thaliana
sequence At5g17420 cellulose synthase catalytic subunit
(IRX3) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 546
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 238 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 179
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 178 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 122
>gb|BQ695648.1|BQ695648 NXPV_030_H04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_030_H04 5' similar to Arabidopsis
thaliana sequence At5g17420 cellulose synthase catalytic
subunit (IRX3) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 491
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 187 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 128
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 127 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 71
>gb|BQ697774.1|BQ697774 NXPV_052_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_052_F10 5' similar to Arabidopsis
thaliana sequence At5g17420 cellulose synthase catalytic
subunit (IRX3) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 523
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 187 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 128
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 127 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 71
>gb|BQ703105.1|BQ703105 NXSI_136_D09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_136_D09 5' similar to Arabidopsis thaliana
sequence At5g17420 cellulose synthase catalytic subunit
(IRX3) see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 483
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 220 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 161
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 160 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 104
>gb|DR060720.1|DR060720 RTNIT1_29_C08.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_C08_A029 5', mRNA sequence
Length = 789
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 621 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 680
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 681 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 737
>gb|AH014291.1|SEG_AY764675S Pinus taeda isolate 16 cellulose synthase genes, partial cds
Length = 1023
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 844 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 785
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 784 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
Score = 91.7 bits (46), Expect = 2e-016
Identities = 145/178 (81%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 453 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 394
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 393 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 334
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
| |||||||||||| ||||| ||||| || || || || || ||||||||||| ||||
Sbjct: 333 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaa 276
>gb|AY764676.1|AY764675S2 Pinus taeda isolate 16 cellulose synthase gene, partial cds
Length = 452
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 273 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 214
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 213 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 157
>gb|AH014292.1|SEG_AY764677S Pinus taeda isolate 25 cellulose synthase genes, partial cds
Length = 1023
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 844 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 785
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 784 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
Score = 91.7 bits (46), Expect = 2e-016
Identities = 145/178 (81%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 453 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 394
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 393 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 334
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
| |||||||||||| ||||| ||||| || || || || || ||||||||||| ||||
Sbjct: 333 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaa 276
>gb|AY764678.1|AY764677S2 Pinus taeda isolate 25 cellulose synthase gene, partial cds
Length = 452
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 273 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 214
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 213 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 157
>gb|AH014293.1|SEG_AY764679S Pinus taeda isolate 7 cellulose synthase genes, partial cds
Length = 1023
Score = 97.6 bits (49), Expect = 3e-018
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 417 aaccacgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacag 476
|||||||||||| || || |||||||||| |||||||||||||||||||| || |||||
Sbjct: 844 aaccacgatggtgggtgttcggttctgcctgcccatgagacccttgaggaaaggatacag 785
Query: 477 gtgaacgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactg 533
||| || || |||||||| || ||||| ||||| || ||||| |||||||| |||||
Sbjct: 784 gtgcacaatgacccagaatgcaaagaaaagcttacccaagagaggaccccatgactg 728
Score = 91.7 bits (46), Expect = 2e-016
Identities = 145/178 (81%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
||||| ||||| || | |||||| || | ||||||||||| ||||||||| ||||||||
Sbjct: 453 atttctactgatcccaaagcccaacgcaacacctggttcaaacggtctgatagattgatt 394
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
||||| || || ||||| || | || || ||||| ||||| || ||||||||||||||
Sbjct: 393 ggagcagaccctttgaatgctgctcgtttgggcatacagtaaatggaccgccagcctcga 334
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
| |||||||||||| ||||| ||||| || || || || || ||||||||||| ||||
Sbjct: 333 gtgtgcatcttgaatccagtcagaatgtcctctgtgactgatccatagatccatccaa 276
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 411,252
Number of Sequences: 355925
Number of extensions: 411252
Number of successful extensions: 100861
Number of sequences better than 0.5: 245
Number of HSP's better than 0.5 without gapping: 243
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 100080
Number of HSP's gapped (non-prelim): 719
length of query: 3782
length of database: 217,277,237
effective HSP length: 20
effective length of query: 3762
effective length of database: 210,158,737
effective search space: 790617168594
effective search space used: 790617168594
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)