BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405245.2.3
(2175 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO410800.1|CO410800 EST841185 Sequencing ESTs from loblo... 184 1e-044
gb|CV139033.1|CV139033 EST850242 Sequencing ESTs from loblo... 184 1e-044
gb|DN445630.1|DN445630 EST941429 Sequencing ESTs from loblo... 184 1e-044
gb|DN446966.1|DN446966 EST942765 Sequencing ESTs from loblo... 184 1e-044
gb|DN454302.1|DN454302 EST950101 Sequencing ESTs from loblo... 184 1e-044
gb|DN456080.1|DN456080 EST951879 Sequencing ESTs from loblo... 184 1e-044
gb|DN458383.1|DN458383 EST954182 Sequencing ESTs from loblo... 184 1e-044
gb|DN458811.1|DN458811 EST954610 Sequencing ESTs from loblo... 184 1e-044
gb|DN459451.1|DN459451 EST955250 Sequencing ESTs from loblo... 184 1e-044
gb|DN461258.1|DN461258 EST957057 Sequencing ESTs from loblo... 184 1e-044
gb|DT626807.1|DT626807 EST1159883 Sequencing ESTs from lobl... 184 1e-044
gb|DT626827.1|DT626827 EST1159903 Sequencing ESTs from lobl... 184 1e-044
gb|DR013127.1|DR013127 HEAT1_17_E04.b1_A029 Root at 37 C fo... 172 4e-041
gb|CF402878.1|CF402878 RTWW1_23_F05.g1_A015 Well-watered lo... 170 2e-040
gb|CN785813.1|CN785813 EST784504 Sequencing ESTs from loblo... 167 2e-039
gb|CF664426.1|CF664426 RTCNT1_9_E05.g1_A029 Root control Pi... 165 9e-039
gb|CV138136.1|CV138136 EST849345 Sequencing ESTs from loblo... 165 9e-039
gb|CV145879.1|CV145879 EST857088 Sequencing ESTs from loblo... 165 9e-039
gb|DR689916.1|DR689916 EST1080002 Normalized pine embryo li... 135 8e-030
gb|DT633202.1|DT633202 EST1148133 Normalized pine embryo li... 133 3e-029
gb|DN448092.1|DN448092 EST943891 Sequencing ESTs from loblo... 131 1e-028
gb|DR682506.1|DR682506 EST1072581 Normalized pine embryo li... 131 1e-028
gb|DR682507.1|DR682507 EST1072582 Normalized pine embryo li... 119 5e-025
gb|DT631127.1|DT631127 EST1146058 Normalized pine embryo li... 119 5e-025
gb|DR686826.1|DR686826 EST1076904 Normalized pine embryo li... 115 8e-024
gb|CO414354.1|CO414354 EST844739 Sequencing ESTs from loblo... 111 1e-022
gb|CO414530.1|CO414530 EST844915 Sequencing ESTs from loblo... 111 1e-022
gb|DR686259.1|DR686259 EST1076337 Normalized pine embryo li... 111 1e-022
gb|CV146456.1|CV146456 EST857665 Sequencing ESTs from loblo... 107 2e-021
gb|AW985236.1|AW985236 NXNV_132_G09_F Nsf Xylem Normal wood... 101 1e-019
gb|BX250886.1|BX250886 BX250886 Pinus pinaster differenciat... 96 7e-018
gb|BX251300.1|BX251300 BX251300 Pinus pinaster differenciat... 96 7e-018
gb|CF668609.1|CF668609 RTCNT1_37_C09.g1_A029 Root control P... 96 7e-018
gb|CX712437.1|CX712437 RTPQ1_2_B10.g2_A032 Roots treated wi... 96 7e-018
gb|CV145560.1|CV145560 EST856769 Sequencing ESTs from loblo... 94 3e-017
gb|DN454648.1|DN454648 EST950447 Sequencing ESTs from loblo... 94 3e-017
gb|DN455552.1|DN455552 EST951351 Sequencing ESTs from loblo... 94 3e-017
gb|BX255050.1|BX255050 BX255050 Pinus pinaster differenciat... 88 2e-015
gb|AW784126.1|AW784126 NXNV_103_D08_F Nsf Xylem Normal wood... 88 2e-015
gb|BG832837.1|BG832837 NXPV_081_C11_F NXPV (Nsf Xylem Plani... 88 2e-015
gb|BQ635289.1|BQ635289 NXRV078_E04_F NXRV (Nsf Xylem Root w... 88 2e-015
gb|BQ696241.1|BQ696241 NXPV_037_A06_F NXPV (Nsf Xylem Plani... 88 2e-015
gb|DR180298.1|DR180298 RTMNUT1_27_E10.g1_A029 Roots minus m... 88 2e-015
gb|BG832474.1|BG832474 NXPV_073_C06_F NXPV (Nsf Xylem Plani... 76 7e-012
gb|BQ696271.1|BQ696271 NXPV_037_D02_F NXPV (Nsf Xylem Plani... 76 7e-012
gb|CF390890.1|CF390890 RTDR3_2_G07.g1_A022 Loblolly pine ro... 76 7e-012
gb|CF391347.1|CF391347 RTDR3_1_F02.b1_A022 Loblolly pine ro... 76 7e-012
gb|CO200327.1|CO200327 GEO2_6_F09.g1_A032 Root gravitropism... 76 7e-012
gb|DR024998.1|DR024998 STRS1_69_A06.b1_A034 Shoot tip pitch... 76 7e-012
gb|AW289445.1|AW289445 NXNV001A12F Nsf Xylem Normal wood Ve... 72 1e-010
gb|BX249291.1|BX249291 BX249291 Pinus pinaster differenciat... 72 1e-010
gb|BF221092.1|BF221092 NXCI_163_C10_F NXCI (Nsf Xylem Compr... 72 1e-010
gb|CD028017.1|CD028017 NXNV001A12 Nsf Xylem Normal wood Ver... 72 1e-010
gb|BX679132.1|BX679132 BX679132 RS Pinus pinaster cDNA clon... 72 1e-010
gb|BX253218.1|BX253218 BX253218 Pinus pinaster differenciat... 70 4e-010
gb|BE187220.1|BE187220 NXNV_160_G05_F Nsf Xylem Normal wood... 70 4e-010
gb|BE520010.1|BE520010 NXCI_028_A12_F NXCI (Nsf Xylem Compr... 70 4e-010
gb|CF391377.1|CF391377 RTDR3_1_F02.g1_A022 Loblolly pine ro... 70 4e-010
gb|BF169605.1|BF169605 NXCI_125_B12_F NXCI (Nsf Xylem Compr... 68 2e-009
gb|CF391306.1|CF391306 RTDR3_1_G02.b1_A022 Loblolly pine ro... 68 2e-009
gb|BF609283.1|BF609283 NXSI_042_E05_F NXSI (Nsf Xylem Side ... 64 3e-008
gb|BM493921.1|BM493921 NXLV_071_E06_F NXLV (Nsf Xylem Late ... 64 3e-008
gb|CD020168.1|CD020168 NXNV021D08 Nsf Xylem Normal wood Ver... 64 3e-008
gb|BM428105.1|BM428105 NXRV_008_G12_F NXRV (Nsf Xylem Root ... 62 1e-007
gb|CD021757.1|CD021757 NXNV_76_F12_F Nsf Xylem Normal wood ... 62 1e-007
gb|DR098956.1|DR098956 STRR1_49_C11.b1_A033 Stem Response R... 62 1e-007
gb|AW324772.1|AW324772 NXNV026C06F Nsf Xylem Normal wood Ve... 60 4e-007
gb|CD027582.1|CD027582 NXNV026C06 Nsf Xylem Normal wood Ver... 60 4e-007
gb|BE123762.1|BE123762 NXNV_156_A02_F Nsf Xylem Normal wood... 56 6e-006
gb|AW010207.1|AW010207 ST03D02 Pine TriplEx shoot tip libra... 54 2e-005
gb|AW290177.1|AW290177 NXNV015C07F Nsf Xylem Normal wood Ve... 54 2e-005
gb|BX255245.1|BX255245 BX255245 Pinus pinaster differenciat... 54 2e-005
gb|BE451961.1|BE451961 NXCI_006_G11_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BE451977.1|BE451977 NXCI_007_A01_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BE607184.1|BE607184 NXCI_038_A08_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BF221303.1|BF221303 NXCI_157_B06_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BF221328.1|BF221328 NXCI_157_D10_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BF609500.1|BF609500 NXSI_043_D01_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|BG039542.1|BG039542 NXSI_100_B12_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|BG040630.1|BG040630 NXSI_113_C12_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|BG318777.1|BG318777 NXPV_016_G04_F NXPV (Nsf Xylem Plani... 54 2e-005
gb|BQ698027.1|BQ698027 NXPV_063_F12_F NXPV (Nsf Xylem Plani... 54 2e-005
gb|BQ702114.1|BQ702114 NXSI_125_D01_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|CD020627.1|CD020627 NXNV_077_D01_F Nsf Xylem Normal wood... 54 2e-005
gb|CD021932.1|CD021932 NXNV_185_C11_F Nsf Xylem Normal wood... 54 2e-005
gb|CD022863.1|CD022863 NXPV_087_A12_F NXPV (Nsf Xylem Plani... 54 2e-005
gb|CD026846.1|CD026846 NXNV015C07 Nsf Xylem Normal wood Ver... 54 2e-005
gb|CO200244.1|CO200244 GEO2_6_F09.b1_A032 Root gravitropism... 54 2e-005
gb|BX254319.1|BX254319 BX254319 Pinus pinaster differenciat... 52 1e-004
gb|AW698173.1|AW698173 NXNV_074_B10_F Nsf Xylem Normal wood... 52 1e-004
gb|BE520097.1|BE520097 NXCI_016_G04_F NXCI (Nsf Xylem Compr... 52 1e-004
gb|BE582159.1|BE582159 NXCI_023_C04_F NXCI (Nsf Xylem Compr... 52 1e-004
gb|BQ697930.1|BQ697930 NXPV_062_F04_F NXPV (Nsf Xylem Plani... 52 1e-004
gb|DR109861.1|DR109861 RTS1_6_A06.b1_A029 Roots minus sulfu... 52 1e-004
gb|CD016670.1|CD016670 NXCI_057_C07_F NXCI (Nsf Xylem Compr... 48 0.002
gb|CD021152.1|CD021152 NXNV_118_A10_F Nsf Xylem Normal wood... 48 0.002
gb|CD023095.1|CD023095 NXPV_099_C05_F NXPV (Nsf Xylem Plani... 48 0.002
gb|AW736991.1|AW736991 NXNV_082_G09_F Nsf Xylem Normal wood... 46 0.006
gb|BE496330.1|BE496330 NXCI_022_G10_F NXCI (Nsf Xylem Compr... 46 0.006
gb|BF169499.1|BF169499 NXCI_120_B12_F NXCI (Nsf Xylem Compr... 46 0.006
gb|BF609646.1|BF609646 NXSI_047_F05_F NXSI (Nsf Xylem Side ... 46 0.006
gb|BG040464.1|BG040464 NXSI_108_E06_F NXSI (Nsf Xylem Side ... 46 0.006
gb|BG318045.1|BG318045 NXPV_008_H05_F NXPV (Nsf Xylem Plani... 42 0.095
gb|BI643866.1|BI643866 NXPV_126_A09_F NXPV (Nsf Xylem Plani... 42 0.095
gb|CF402808.1|CF402808 RTWW1_23_F05.b1_A015 Well-watered lo... 42 0.095
gb|AW010249.1|AW010249 ST03H01 Pine TriplEx shoot tip libra... 40 0.37
gb|BX249566.1|BX249566 BX249566 Pinus pinaster differenciat... 40 0.37
gb|AW758915.1|AW758915 NXNV_094_G09_F Nsf Xylem Normal wood... 40 0.37
gb|AW985251.1|AW985251 NXNV_132_D03_F Nsf Xylem Normal wood... 40 0.37
gb|BE431388.1|BE431388 NXNV_181_F06_F Nsf Xylem Normal wood... 40 0.37
gb|BF778582.1|BF778582 NXSI_088_D03_F NXSI (Nsf Xylem Side ... 40 0.37
gb|BF778755.1|BF778755 NXSI_086_F11_F NXSI (Nsf Xylem Side ... 40 0.37
gb|BQ654594.1|BQ654594 NXRV082_F11_F NXRV (Nsf Xylem Root w... 40 0.37
gb|BQ695622.1|BQ695622 NXPV_030_E10_F NXPV (Nsf Xylem Plani... 40 0.37
gb|BQ695717.1|BQ695717 NXPV_031_H11_F NXPV (Nsf Xylem Plani... 40 0.37
gb|BQ699235.1|BQ699235 NXRV121_B08_F NXRV (Nsf Xylem Root w... 40 0.37
gb|BQ701947.1|BQ701947 NXSI_122_E05_F NXSI (Nsf Xylem Side ... 40 0.37
gb|CD021347.1|CD021347 NXNV_142_B04_F Nsf Xylem Normal wood... 40 0.37
gb|BX682793.1|BX682793 BX682793 Pinus pinaster differenciat... 40 0.37
gb|DR017543.1|DR017543 STRS1_17_A06.b1_A034 Shoot tip pitch... 40 0.37
gb|DR017618.1|DR017618 STRS1_17_A06.g1_A034 Shoot tip pitch... 40 0.37
gb|DR018115.1|DR018115 STRS1_20_C07.g1_A034 Shoot tip pitch... 40 0.37
gb|DR024764.1|DR024764 STRS1_67_G11.b1_A034 Shoot tip pitch... 40 0.37
gb|DR053888.1|DR053888 RTCA1_14_A01.b1_A029 Roots minus cal... 40 0.37
gb|DR053962.1|DR053962 RTCA1_14_A01.g1_A029 Roots minus cal... 40 0.37
gb|DR059162.1|DR059162 RTNIT1_16_C04.b1_A029 Roots minus ni... 40 0.37
gb|DR099712.1|DR099712 STRR1_58_A03.b1_A033 Stem Response R... 40 0.37
gb|DR100066.1|DR100066 STRR1_61_H02.b1_A033 Stem Response R... 40 0.37
gb|DR109689.1|DR109689 RTS1_4_B09.b1_A029 Roots minus sulfu... 40 0.37
gb|DR180220.1|DR180220 RTMNUT1_27_E10.b1_A029 Roots minus m... 40 0.37
>gb|CO410800.1|CO410800 EST841185 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIALB91 5' end, mRNA sequence
Length = 831
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 139 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 198
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 199 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 258
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 259 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 318
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 319 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 378
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 379 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 438
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 439 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 498
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 499 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 558
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 559 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 618
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 619 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 678
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 679 gccatgaacaagttcgattgggatcaccc 707
>gb|CV139033.1|CV139033 EST850242 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIBA29 5' end, mRNA sequence
Length = 904
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 130 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 189
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 190 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 249
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 250 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 309
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 310 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 369
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 370 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 429
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 430 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 489
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 490 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 549
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 550 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 609
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 610 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 669
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 670 gccatgaacaagttcgattgggatcaccc 698
>gb|DN445630.1|DN445630 EST941429 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PICV343 5' end, mRNA sequence
Length = 825
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 91 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 150
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 151 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 210
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 211 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 270
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 271 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 330
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 331 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 390
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 391 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 450
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 451 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 510
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 511 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 570
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 571 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 630
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 631 gccatgaacaagttcgattgggatcaccc 659
>gb|DN446966.1|DN446966 EST942765 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIBN64 5' end, mRNA sequence
Length = 860
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 139 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 198
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 199 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 258
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 259 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 318
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 319 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 378
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 379 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 438
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 439 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 498
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 499 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 558
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 559 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 618
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 619 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 678
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 679 gccatgaacaagttcgattgggatcaccc 707
>gb|DN454302.1|DN454302 EST950101 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIG215 5' end, mRNA sequence
Length = 859
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 5 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 64
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 65 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 124
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 125 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 184
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 185 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 244
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 245 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 304
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 305 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 364
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 365 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 424
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 425 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 484
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 485 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 544
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 545 gccatgaacaagttcgattgggatcaccc 573
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 623 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 682
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 683 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 742
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 743 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 789
>gb|DN456080.1|DN456080 EST951879 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIGL17 5' end, mRNA sequence
Length = 719
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 91 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 150
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 151 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 210
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 211 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 270
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 271 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 330
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 331 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 390
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 391 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 450
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 451 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 510
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 511 gataccggggatactagagaaacttctgccattgatgtctgccatgggttgctgggagac 570
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 571 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 630
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 631 gccatgaacaagttcgattgggatcaccc 659
>gb|DN458383.1|DN458383 EST954182 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIHB32 5' end, mRNA sequence
Length = 943
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 101 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 160
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 161 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 220
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 221 tgcgaggccacaggggccgacgtggctgaagtcgcatatgccgtcgggaaagattctcgg 280
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 281 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 340
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 341 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 400
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 401 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 460
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 461 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 520
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 521 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggggac 580
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 581 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 640
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 641 gccatgaacaagttcgattgggatcaccc 669
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 719 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 778
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 779 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 838
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 839 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 885
>gb|DN458811.1|DN458811 EST954610 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIHG07 5' end, mRNA sequence
Length = 949
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 91 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 150
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 151 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 210
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 211 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 270
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 271 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 330
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 331 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 390
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 391 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 450
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 451 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 510
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 511 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 570
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 571 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 630
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 631 gccatgaacaagttcgattgggatcaccc 659
Score = 50.1 bits (25), Expect = 4e-004
Identities = 127/161 (78%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 709 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 768
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 769 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 828
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgag 1461
|| ||||| || ||||| |||| || |||||||||||||
Sbjct: 829 gtattcgatggtcgcaatgtcgtagatgccgagaagctgag 869
>gb|DN459451.1|DN459451 EST955250 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIHN31 5' end, mRNA sequence
Length = 922
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 81 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 140
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 141 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 200
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 201 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 260
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 261 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 320
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 321 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 380
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 381 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 440
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 441 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 500
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 501 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 560
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 561 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 620
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 621 gccatgaacaagttcgattgggatcaccc 649
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 699 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 758
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 759 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 818
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 819 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 865
>gb|DN461258.1|DN461258 EST957057 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPII825 5' end, mRNA sequence
Length = 790
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 113 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 172
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 173 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 232
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 233 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 292
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 293 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 352
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 353 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 412
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 413 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 472
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 473 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 532
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 533 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 592
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 593 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 652
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 653 gccatgaacaagttcgattgggatcaccc 681
>gb|DT626807.1|DT626807 EST1159883 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAR53 5' end, mRNA sequence
Length = 853
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 101 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 160
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 161 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 220
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 221 tgcgaggccacaggggccgacgtggctgaagtcgcatatgccgtcgggaaagattctcgg 280
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 281 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 340
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 341 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 400
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 401 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 460
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 461 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 520
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 521 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggggac 580
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 581 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 640
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 641 gccatgaacaagttcgattgggatcaccc 669
>gb|DT626827.1|DT626827 EST1159903 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAR78 5' end, mRNA sequence
Length = 865
Score = 184 bits (93), Expect = 1e-044
Identities = 450/569 (79%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 91 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 150
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 151 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 210
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 211 tgcgaggccacaggggccgacgtggctgaagtcgcgtatgccgtcgggaaagattctcgg 270
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 271 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 330
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 331 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 390
Query: 983 aagcaggtgatcaagatcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcg 1042
|||||||| | | ||||| || |||||||||||| |||| |||||| | ||||||||
Sbjct: 391 aagcaggttgttcatatcaatgattaccagaagagcaggtttgtgaacagggtcgtgtca 450
Query: 1043 tccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggcttcgccttcaagaag 1102
|| |||||||| ||||| | ||||||||||| || ||| | || || || ||||||||
Sbjct: 451 tcgatgttcaataccgtgtcgggcaagaagattgcggtcttagggtttgcgttcaagaaa 510
Query: 1103 gacaccggcgacaccagggagaccccggccatcgatgtctgcaagggcctgctgggtgac 1162
|| ||||| || || || || || | ||||| ||||||||| | || ||||||| |||
Sbjct: 511 gataccggggatactagagaaactgctgccattgatgtctgccatgggttgctgggagac 570
Query: 1163 aaggcccagatcagcatctacgacccccaggtgacggaggaccagatccagcgggacctg 1222
| ||| ||| | ||||||||||| || ||||| || ||||| ||||||| | |||| ||
Sbjct: 571 agggcacagctgagcatctacgatccgcaggtaacagaggatcagatccggagggatctt 630
Query: 1223 gccatgaacaagttcgactgggaccaccc 1251
||||||||||||||||| ||||| |||||
Sbjct: 631 gccatgaacaagttcgattgggatcaccc 659
Score = 42.1 bits (21), Expect = 0.095
Identities = 108/137 (78%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 709 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 768
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 769 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 828
Query: 1421 gtcttcgacggccgcaa 1437
|| ||||| || |||||
Sbjct: 829 gtattcgatggtcgcaa 845
>gb|DR013127.1|DR013127 HEAT1_17_E04.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_17_E04_A029 3', mRNA sequence
Length = 859
Score = 172 bits (87), Expect = 4e-041
Identities = 570/731 (77%)
Strand = Plus / Minus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 754 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 695
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 694 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 635
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || || || || || || |||||||| | ||||||
Sbjct: 634 gtggagaaatcgacggtgccggtgaaaactgcagaagcgatcgagaagattctcacccac 575
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 574 aacaacaaggggatccactttcagatattatctaaccccgaatttctggccgaggggacc 515
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 514 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 455
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 454 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 395
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 394 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 335
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcgaat 823
|| |||||||| || |||||||| ||||| |||||||||||||||||||| || || |
Sbjct: 334 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccacaggggccgac 275
Query: 824 gtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaac 883
||| |||| || || || ||||| || || || | |||| || ||| ||| |||||
Sbjct: 274 gtggctgaagtcgcgtatgccgtcgggaaagattctcggatcggaccccggtttctgaat 215
Query: 884 gccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatc 943
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| |||||||||||
Sbjct: 214 tccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatc 155
Query: 944 tgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaac 1003
|| || |||||||| ||| | || |||||||| |||||||||||||| | | |||||
Sbjct: 154 tgtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatcaat 95
Query: 1004 gactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgcc 1063
|| |||||||||||| |||| |||||| | |||||||| || |||||||| ||||| |
Sbjct: 94 gattaccagaagagcaggtttgtgaacagggtcgtgtcatcgatgttcaataccgtgtcg 35
Query: 1064 ggcaagaagat 1074
|||||||||||
Sbjct: 34 ggcaagaagat 24
>gb|CF402878.1|CF402878 RTWW1_23_F05.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_23_F05_A015 5', mRNA sequence
Length = 761
Score = 170 bits (86), Expect = 2e-040
Identities = 389/490 (79%)
Strand = Plus / Plus
Query: 762 tggcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcga 821
|||| |||||||| || |||||||| ||||| |||||||||||||||||||| || ||
Sbjct: 80 tggcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccacaggggccg 139
Query: 822 atgtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctga 881
| ||| |||| || || || ||||| || || || | |||| || ||| ||| ||||
Sbjct: 140 acgtggctgaagtcgcatatgccgtcgggaaagattctcggatcggaccccggtttctga 199
Query: 882 acgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtaca 941
| |||||||||| ||||| ||||| ||||| ||||| || ||| |||| |||||||||
Sbjct: 200 attccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtaca 259
Query: 942 tctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatca 1001
|||| || |||||||| ||| | || |||||||| |||||||||||||| | | ||||
Sbjct: 260 tctgtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatca 319
Query: 1002 acgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcg 1061
| || |||||||||||| |||| |||||| | || ||||| || |||||||| |||||
Sbjct: 320 atgattaccagaagagcaggtttgtgaacagggttgtgtcatcgatgttcaataccgtgt 379
Query: 1062 ccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccaggg 1121
| ||||||||||| || ||| | || || || |||||||| || ||||| || || || |
Sbjct: 380 cgggcaagaagattgcggtcttagggtttgcgttcaagaaagataccggggatactagag 439
Query: 1122 agaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatct 1181
| || | ||||| ||||||||| | || ||||||| |||| ||| ||| | |||||||
Sbjct: 440 aaactgctgccattgatgtctgccatgggttgctgggggacagggcacagctgagcatct 499
Query: 1182 acgacccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgact 1241
|||| || ||||| || ||||| ||||||| | |||| || ||||||||||||||||| |
Sbjct: 500 acgatccgcaggtaacagaggatcagatccggagggatcttgccatgaacaagttcgatt 559
Query: 1242 gggaccaccc 1251
|||| |||||
Sbjct: 560 gggatcaccc 569
Score = 42.1 bits (21), Expect = 0.095
Identities = 108/137 (78%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 619 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 678
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 679 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 738
Query: 1421 gtcttcgacggccgcaa 1437
|| ||||| || |||||
Sbjct: 739 gtattcgatggtcgcaa 755
>gb|CN785813.1|CN785813 EST784504 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAB379 5' end, mRNA sequence
Length = 748
Score = 167 bits (84), Expect = 2e-039
Identities = 558/716 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 21 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 80
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 81 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 140
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || || || || || || |||||||| | ||||||
Sbjct: 141 gtggagaaatcgacggtgccggtgaaaactgcagaagcgatcgagaagattctcacccac 200
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 201 aacaacaaggggatccactttcagatattatctaaccccgaatttctggccgaggggacc 260
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 261 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 320
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 321 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 380
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 381 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 440
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcgaat 823
|| |||||||| || |||||||| ||||| |||||||||||||||||||| || || |
Sbjct: 441 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccacaggggccgac 500
Query: 824 gtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaac 883
||| |||| || || || ||||| || || || | |||| || ||| ||| |||||
Sbjct: 501 gtggctgaagtcgcgtatgccgtcgggaaagattctcggatcggaccccggtttctgaat 560
Query: 884 gccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatc 943
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| |||||||||||
Sbjct: 561 tccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatc 620
Query: 944 tgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaac 1003
|| || |||||||| ||| | || |||||||| |||||||||||||| | | |||||
Sbjct: 621 tgtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatcaat 680
Query: 1004 gactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgt 1059
|| |||||||||||| |||| |||||| | |||||||| || |||||||| |||||
Sbjct: 681 gattaccagaagagcaggtttgtgaacagggtcgtgtcatcgatgttcaataccgt 736
>gb|CF664426.1|CF664426 RTCNT1_9_E05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_9_E05_A029 5', mRNA sequence
Length = 536
Score = 165 bits (83), Expect = 9e-039
Identities = 296/367 (80%)
Strand = Plus / Plus
Query: 885 ccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatct 944
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| ||||||||||||
Sbjct: 19 ccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatct 78
Query: 945 gcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacg 1004
| || |||||||| ||| | || |||||||| |||||||||||||| | | ||||| |
Sbjct: 79 gtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatcaatg 138
Query: 1005 actaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccg 1064
| |||||||||||| |||| |||||| | |||||||| || |||||||| ||||| | |
Sbjct: 139 attaccagaagagcaggtttgtgaacagggtcgtgtcatcgatgttcaataccgtgtcgg 198
Query: 1065 gcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggaga 1124
|||||||||| || ||| | || || || |||||||| || ||||| || || || || |
Sbjct: 199 gcaagaagattgcggtcttagggtttgcgttcaagaaagataccggggatactagagaaa 258
Query: 1125 ccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacg 1184
| | ||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||
Sbjct: 259 ctgctgccattgatgtctgccatgggttgctgggggacagggcacagctgagcatctacg 318
Query: 1185 acccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactggg 1244
| || ||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||
Sbjct: 319 atccgcaggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattggg 378
Query: 1245 accaccc 1251
| |||||
Sbjct: 379 atcaccc 385
>gb|CV138136.1|CV138136 EST849345 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIAZ35 5' end, mRNA sequence
Length = 915
Score = 165 bits (83), Expect = 9e-039
Identities = 296/367 (80%)
Strand = Plus / Plus
Query: 885 ccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatct 944
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| ||||||||||||
Sbjct: 68 ccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatct 127
Query: 945 gcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaacg 1004
| || |||||||| ||| | || |||||||| |||||||||||||| | | ||||| |
Sbjct: 128 gtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatcaatg 187
Query: 1005 actaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccg 1064
| |||||||||||| |||| |||||| | |||||||| || |||||||| ||||| | |
Sbjct: 188 attaccagaagagcaggtttgtgaacagggtcgtgtcatcgatgttcaataccgtgtcgg 247
Query: 1065 gcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacaccagggaga 1124
|||||||||| || ||| | || || || |||||||| || ||||| || || || || |
Sbjct: 248 gcaagaagattgcggtcttagggtttgcgttcaagaaagataccggggatactagagaaa 307
Query: 1125 ccccggccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacg 1184
| | ||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||
Sbjct: 308 ctgctgccattgatgtctgccatgggttgctgggggacagggcacagctgagcatctacg 367
Query: 1185 acccccaggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactggg 1244
| || ||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||
Sbjct: 368 atccgcaggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattggg 427
Query: 1245 accaccc 1251
| |||||
Sbjct: 428 atcaccc 434
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 484 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 543
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 544 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 603
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 604 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 650
>gb|CV145879.1|CV145879 EST857088 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIDQ19 5' end, mRNA sequence
Length = 915
Score = 165 bits (83), Expect = 9e-039
Identities = 569/731 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 183 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 242
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 243 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 302
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || || || || || || |||||||| | ||||||
Sbjct: 303 gtggagaaatcgacggtgccggtgaaaactgcagaagcgatcgagaagattctcacccac 362
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 363 aacaacaaggggatccactttcagatattatctaaccccgaatttctggccgaggggacc 422
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 423 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 482
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 483 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 542
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 543 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 602
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcgaat 823
|| |||||||| || |||||||| ||||| |||||||||||||||||||| || || |
Sbjct: 603 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccacaggggccgac 662
Query: 824 gtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaac 883
||| |||| || || || ||||| || || || | |||| || ||| ||| |||||
Sbjct: 663 gtggctgaagtcgcgtatgccgtcgggaaagattctcggatcggaccccggtttctgaat 722
Query: 884 gccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatc 943
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| |||||||||||
Sbjct: 723 tccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatc 782
Query: 944 tgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaagatcaac 1003
|| || |||||||| ||| | || |||||||| |||||||||||||| | | |||||
Sbjct: 783 tgtgaatgcaatgggctgtcggatgtggccaattactggaagcaggttgttcatatcaat 842
Query: 1004 gactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgcc 1063
|| |||||||||||| ||| |||||| | |||||||| || |||||||| ||||| |
Sbjct: 843 gattaccagaagagcacgtttgtgaacagggtcgtgtcatcgatgttcaataccgtgtcg 902
Query: 1064 ggcaagaagat 1074
|||||||||||
Sbjct: 903 ggcaagaagat 913
>gb|DR689916.1|DR689916 EST1080002 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACO92 3' end, mRNA sequence
Length = 841
Score = 135 bits (68), Expect = 8e-030
Identities = 275/344 (79%)
Strand = Plus / Plus
Query: 908 tgcttccagaaggacatcctgaacctggtgtacatctgcgagtgcaatggcctgcccgag 967
||||| ||||| || ||| |||| ||||||||||||| || |||||||| ||| | ||
Sbjct: 2 tgctttcagaaagatatcttgaatttggtgtacatctgtgaatgcaatgggctgtcggat 61
Query: 968 gtggccaactactggaagcaggtgatcaagatcaacgactaccagaagagccggttcgtg 1027
|||||||| ||||||||| |||| | | ||||| || |||||||||||| |||| |||
Sbjct: 62 gtggccaattactggaagaaggttgttcatatcaatgattaccagaagagcaggtttgtg 121
Query: 1028 aaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccgtcctcggc 1087
||| | |||||||| || |||||||| ||||| | ||||||||||| || ||| | ||
Sbjct: 122 aacagggtcgtgtcatcgatgttcaataccgtgtcgggcaagaagattgcggtcttaggg 181
Query: 1088 ttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatgtctgcaag 1147
|| || |||||||| || ||||| || || || || || | ||||| ||||||||| |
Sbjct: 182 tttgcgttcaagaaagataccggggatactagagaaactgctgccattgatgtctgccat 241
Query: 1148 ggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacggaggaccag 1207
|| ||||||| |||| ||| ||| | ||||||||||| || ||||| || ||||| |||
Sbjct: 242 gggttgctgggagacagggcacagctgagcatctacgatccgcaggtaacagaggatcag 301
Query: 1208 atccagcgggacctggccatgaacaagttcgactgggaccaccc 1251
|||| | |||| || ||||||||||||||||| ||||| |||||
Sbjct: 302 atccggagggatcttgccatgaacaagttcgattgggatcaccc 345
Score = 46.1 bits (23), Expect = 0.006
Identities = 131/167 (78%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 395 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 454
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 455 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 514
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| ||| || |||||||||||||| ||||
Sbjct: 515 gtattcgatggtcgcaatgccgtagatgccgagaagctgaggaagat 561
>gb|DT633202.1|DT633202 EST1148133 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFS42 3' end, mRNA sequence
Length = 858
Score = 133 bits (67), Expect = 3e-029
Identities = 391/499 (78%)
Strand = Plus / Plus
Query: 90 acaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccg 149
|||| ||||||||||||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct: 180 acaagatggtgaagatctgctgcatcggagcagggtatgtgggtggccccaccatggctg 239
Query: 150 tcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgca 209
| || || || || ||||| | |||||| ||||| || ||||||||||| || || || |
Sbjct: 240 tgatagctctgaaatgccccgccattgaagtcgtagtagttgacatctctaatcctcgaa 299
Query: 210 ttgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtga 269
|||| || |||||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct: 300 ttgatgcgtggaacagcgatcagcttccgatctatgaacctggccttgatgaagttgtca 359
Query: 270 agcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgagg 329
| ||||||| | |||||||| ||||| | ||||| |||||||| || ||||| |
Sbjct: 360 aagcctgcagggaaaaaaacctctttttcagttccgatgtagagaagcatgttgctgaag 419
Query: 330 ctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggca 389
| |||||| | || || || || ||||||||||| ||||| | || || || ||| |
Sbjct: 420 ccgacattgtgttcgtttcagtaaacacccccacgaagacaagaggcctcggccatggaa 479
Query: 390 aggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagt 449
| ||||| || || ||||||||||| ||||| || | ||||| || ||||| || || |
Sbjct: 480 aagctgcagatctgacctactgggaaagcgcggctagaatgatagccgatgtttctaaat 539
Query: 450 ctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgaga 509
| ||||| ||||| |||||||| || || || ||||| || || || ||||| ||||| |
Sbjct: 540 cggacaaaattgtcgttgagaaatcaacagttcctgttaaaacagcagaggcaattgaaa 599
Query: 510 agatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttcc 569
|||| || ||||||||||||||||| || ||||| || || ||||| ||||| ||||| |
Sbjct: 600 agattttaacccacaacagcaagggaattaactatcaaattctttctaaccctgagtttc 659
Query: 570 ttgcagagggcactgctat 588
|||||||||| || |||||
Sbjct: 660 ttgcagagggaaccgctat 678
>gb|DN448092.1|DN448092 EST943891 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC087 5' end, mRNA sequence
Length = 939
Score = 131 bits (66), Expect = 1e-028
Identities = 495/638 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 302 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 361
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 362 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 421
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 422 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 481
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 482 aacaacaaggggatccactttcagatattgtctaaccccgaatttctggccgaggggacc 541
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 542 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 601
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 602 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 661
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 662 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 721
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccaccggcgcgaat 823
|| |||||||| || |||||||| ||||| |||||||||||||||||||| || || |
Sbjct: 722 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccacaggggccgac 781
Query: 824 gtgactgaggtggcttacgccgtgggcaaggacacgaggattggccccaagttcctgaac 883
||| |||| || || || ||||| || || || | |||| || ||| ||| |||||
Sbjct: 782 gtggctgaagtcgcgtatgccgtcgggaaagattctcggatcggaccccggtttctgaat 841
Query: 884 gccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgtacatc 943
|||||||||| ||||| ||||| ||||| ||||| || ||| |||| |||||||||||
Sbjct: 842 tccagtgttggattcggcgggtcgtgctttcagaaagatatcttgaatttggtgtacatc 901
Query: 944 tgcgagtgcaatggcctgcccgaggtggccaactactg 981
|| || |||||||| ||| | || |||||||| |||||
Sbjct: 902 tgtgaatgcaatgggctgtcggatgtggccaattactg 939
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 53 atggtgaagatctgctgcatcgg 75
>gb|DR682506.1|DR682506 EST1072581 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAA32, mRNA sequence
Length = 788
Score = 131 bits (66), Expect = 1e-028
Identities = 234/290 (80%)
Strand = Plus / Minus
Query: 879 tgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgt 938
|||| ||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 734 tgaatgccagtgttggtttcggtggatcctgcttccagaaggacattctgaatttggtgt 675
Query: 939 acatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaaga 998
|||| || || |||||||| || | ||||| |||| |||||||| | || ||||||
Sbjct: 674 acatttgtgaatgcaatggacttcaagaggtttccaattactggaaacgtgtagtcaaga 615
Query: 999 tcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccg 1058
|||||||||| || ||| | ||||| || ||||| || || |||||||| ||||| |
Sbjct: 614 tcaacgactatcaaaagtctagattcgtcaatcgcgtggtttcatccatgtttaacacgg 555
Query: 1059 tcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacacca 1118
|| | || |||||||| ||| | ||||| || ||||||||||| || || || ||||| |
Sbjct: 554 tctctggaaagaagattgccattctcggatttgccttcaagaaagatacaggggacacta 495
Query: 1119 gggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcc 1168
|||| ||||| ||||| ||||| |||||||| || ||||| |||||||||
Sbjct: 494 gggaaacccctgccattgatgtttgcaagggacttctgggggacaaggcc 445
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1397 gacaacatgcagaagcccgc 1416
||||||||||||||||||||
Sbjct: 216 gacaacatgcagaagcccgc 197
>gb|DR682507.1|DR682507 EST1072582 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAA32 3' end, mRNA sequence
Length = 714
Score = 119 bits (60), Expect = 5e-025
Identities = 391/500 (78%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 90 acaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccg 149
|||| ||||||||||||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct: 114 acaagatggtgaagatctgctgcatcggagcagggtatgtgggtggccccaccatggctg 173
Query: 150 tcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgca 209
| || || || || ||||| | |||||| ||||| || ||||||| ||| || || || |
Sbjct: 174 tgatagctctgaaatgccccgccattgaagtcgtagtagttgacacctctaatcctcgaa 233
Query: 210 ttgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtga 269
|||| || |||||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct: 234 ttgatgcgtggaacagcgatcagcttccgatctatgaacctggccttgatgaagttgtca 293
Query: 270 agcagtgcaggggcagga-acctcttcttcagcactgatgttgagaagcacgtcgctgag 328
| |||||||| | | ||||||| ||||| | ||||| |||||||| || |||||
Sbjct: 294 aagcctgcaggggaaaaaaacctctttttcagttccgatgtagagaagcatgttgctgaa 353
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| |||||| | || || || || ||||||||||| ||||| | || || || |||
Sbjct: 354 gccgacattgtgttcgtttcagtaaacacccccacgaagacaagaggcctcggccatgga 413
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|| ||||| || || ||||||||||| ||||| || | ||||| || ||||| || ||
Sbjct: 414 aaagctgcagatctgacctactgggaaagcgcggctagaatgatagccgatgtttctaaa 473
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| ||||| ||||| |||||||| || || || ||||| || || || ||||| |||||
Sbjct: 474 tcggacaaaattgtcgttgagaaatcaacagttcctgttaaaacagcagaggcaattgaa 533
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||| || ||||||||||||||||| || ||||| || || ||||| ||||| |||||
Sbjct: 534 aagattttaacccacaacagcaagggaattaactatcaaattctttctaaccctgagttt 593
Query: 569 cttgcagagggcactgctat 588
||||||||||| || |||||
Sbjct: 594 cttgcagagggaaccgctat 613
>gb|DT631127.1|DT631127 EST1146058 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMF526 3' end, mRNA sequence
Length = 875
Score = 119 bits (60), Expect = 5e-025
Identities = 391/500 (78%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 90 acaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccg 149
|||| ||||||||||||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct: 182 acaagatggtgaagatctgctgcatcggagcagggtatgtgggtggccccaccatggctg 241
Query: 150 tcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgca 209
| || || || || ||||| | |||||| ||||| || ||||||| ||| || || || |
Sbjct: 242 tgatagctctgaaatgccccgccattgaagtcgtagtagttgacacctctaatcctcgaa 301
Query: 210 ttgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtga 269
|||| || |||||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct: 302 ttgatgcgtggaacagcgatcagcttccgatctatgaacctggccttgatgaagttgtca 361
Query: 270 agcagtgcaggggcagga-acctcttcttcagcactgatgttgagaagcacgtcgctgag 328
| |||||||| | | ||||||| ||||| | ||||| |||||||| || |||||
Sbjct: 362 aagcctgcaggggaaaaaaacctctttttcagttccgatgtagagaagcatgttgctgaa 421
Query: 329 gctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggc 388
|| |||||| | || || || || ||||||||||| ||||| | || || || |||
Sbjct: 422 gccgacattgtgttcgtttcagtaaacacccccacgaagacaagaggcctcggccatgga 481
Query: 389 aaggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaag 448
|| ||||| || || ||||||||||| ||||| || | ||||| || ||||| || ||
Sbjct: 482 aaagctgcagatctgacctactgggaaagcgcggctagaatgatagccgatgtttctaaa 541
Query: 449 tctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgag 508
|| ||||| ||||| |||||||| || || || ||||| || || || ||||| |||||
Sbjct: 542 tcggacaaaattgtcgttgagaaatcaacagttcctgttaaaacagcagaggcaattgaa 601
Query: 509 aagatcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagttc 568
||||| || ||||||||||||||||| || ||||| || || ||||| ||||| |||||
Sbjct: 602 aagattttaacccacaacagcaagggaattaactatcaaattctttctaaccctgagttt 661
Query: 569 cttgcagagggcactgctat 588
||||||||||| || |||||
Sbjct: 662 cttgcagagggaaccgctat 681
>gb|DR686826.1|DR686826 EST1076904 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABK28 3' end, mRNA sequence
Length = 736
Score = 115 bits (58), Expect = 8e-024
Identities = 232/290 (80%)
Strand = Plus / Plus
Query: 879 tgaacgccagtgttgggttcggtgggtcttgcttccagaaggacatcctgaacctggtgt 938
|||| ||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 388 tgaatgccagtgttggtttcggtggatcctgcttccagaaggacattctgaatttggtgt 447
Query: 939 acatctgcgagtgcaatggcctgcccgaggtggccaactactggaagcaggtgatcaaga 998
|||| || || |||||||| || | ||||| |||| |||||||| | || ||||||
Sbjct: 448 acatttgtgaatgcaatggacttcaagaggtttccaattactggaaacgtgtagtcaaga 507
Query: 999 tcaacgactaccagaagagccggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccg 1058
|||||||||| || || | ||||| || ||||| || || |||||||| ||||| |
Sbjct: 508 tcaacgactatcaaaaatctagattcgtcaatcgcgtggtttcatccatgtttaacacgg 567
Query: 1059 tcgccggcaagaagatcgccgtcctcggcttcgccttcaagaaggacaccggcgacacca 1118
|| | || |||||||| ||| | ||||| || ||||||||||| || || || ||||| |
Sbjct: 568 tctctggaaagaagattgccattctcggatttgccttcaagaaagatacaggggacacta 627
Query: 1119 gggagaccccggccatcgatgtctgcaagggcctgctgggtgacaaggcc 1168
| || ||||| ||||| ||||| |||||||| || ||||| |||||||||
Sbjct: 628 gagaaacccctgccattgatgtttgcaagggacttctgggggacaaggcc 677
Score = 71.9 bits (36), Expect = 1e-010
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 497 gaggctattgagaagatcttgacccacaacagcaagggcatcaactaccagatcctttcc 556
||||| ||||| ||||| || ||||||||||||||||| || || || || || |||||
Sbjct: 6 gaggcaattgaaaagattttaacccacaacagcaagggaattaattatcaaattctttct 65
Query: 557 aacccagagttccttgcagagggcactgctattgaggacctgttcaagcctgacagagtg 616
||||| ||||| ||||||||||| || ||||| | || ||||| || |||||| | ||
Sbjct: 66 aaccctgagtttcttgcagagggaaccgctataaacgatctgttgaaacctgaccgcgta 125
Query: 617 ctcatcggtggccgggagac 636
|||||||| ||||| |||||
Sbjct: 126 ctcatcggaggccgagagac 145
>gb|CO414354.1|CO414354 EST844739 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMN23 5' end, mRNA sequence
Length = 769
Score = 111 bits (56), Expect = 1e-022
Identities = 365/468 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 302 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 361
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 362 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 421
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 422 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 481
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 482 aacaacaaggggatccactttcagatattgtctaaccccgaatttctggccgaggggacc 541
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 542 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 601
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 602 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 661
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 662 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 721
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggcc 811
|| |||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 722 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggcc 769
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 53 atggtgaagatctgctgcatcgg 75
>gb|CO414530.1|CO414530 EST844915 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMP65 5' end, mRNA sequence
Length = 769
Score = 111 bits (56), Expect = 1e-022
Identities = 365/468 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 302 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 361
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 362 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 421
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 422 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 481
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 482 aacaacaaggggatccactttcagatattgtctaaccccgaatttctggccgaggggacc 541
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 542 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 601
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 602 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 661
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 662 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 721
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggcc 811
|| |||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 722 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggcc 769
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 53 atggtgaagatctgctgcatcgg 75
>gb|DR686259.1|DR686259 EST1076337 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABE11 3' end, mRNA sequence
Length = 585
Score = 111 bits (56), Expect = 1e-022
Identities = 368/472 (77%)
Strand = Plus / Plus
Query: 90 acaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccg 149
|||| ||||||||||||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct: 114 acaagatggtgaagatctgctgcatcggagcagggtatgtgggtggccccaccatggctg 173
Query: 150 tcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgca 209
| || || || || ||||| | |||||| ||||| || ||||||||||| || || || |
Sbjct: 174 tgatagctctgaaatgccccgccattgaagtcgtagtagttgacatctctaatcctcgaa 233
Query: 210 ttgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtga 269
|||| || |||||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct: 234 ttgatgcgtggaacagcgatcagcttccgatctatgaacctggccttgatgaagttgtca 293
Query: 270 agcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgagg 329
| ||||||| | |||||||| ||||| | ||||| |||||||| || ||||| |
Sbjct: 294 aagcctgcagggaaaaaaacctctttttcagttccgatgtagagaagcatgttgctgaag 353
Query: 330 ctgacattatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggca 389
| |||||| | || || || || ||||||||||| ||||| | || || || ||| |
Sbjct: 354 ccgacattgtgttcgtttcagtaaacacccccacgaagacaagaggcctcggccatggaa 413
Query: 390 aggctgccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagt 449
| ||||| || || ||||||||||| ||||| || | ||||| || ||||| || || |
Sbjct: 414 aagctgcagatctgacctactgggaaagcgcggctagaatgatagccgatgtttctaaat 473
Query: 450 ctgacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgaga 509
| ||||| ||||| |||||||| || || || ||||| || || || ||||| ||||| |
Sbjct: 474 cggacaaaattgtcgttgagaaatcaacagttcctgttaaaacagcagaggcaattgaaa 533
Query: 510 agatcttgacccacaacagcaagggcatcaactaccagatcctttccaaccc 561
|||| || ||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 534 agattttaacccacaacagcaagggaattaactatcaaattctttctaaccc 585
>gb|CV146456.1|CV146456 EST857665 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDW57 5' end, mRNA sequence
Length = 857
Score = 107 bits (54), Expect = 2e-021
Identities = 366/470 (77%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 326 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 385
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 386 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 445
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || || || || || || |||||||| | ||||||
Sbjct: 446 gtggagaaatcgacggtgccggtgaaaactgcagaagcgatcgagaagattctcacccac 505
Query: 524 aacagcaagggcatcaactaccagatcctttccaacccagagttccttgcagagggcact 583
|||| |||||| ||| ||| ||||| | || ||||| || || || || ||||| ||
Sbjct: 506 aacaacaaggggatccactttcagatattatctaaccccgaatttctggccgaggggacc 565
Query: 584 gctattgaggacctgttcaagcctgacagagtgctcatcggtggccgggagacccccgag 643
|| ||||| || ||| ||||| ||||| || | || || || ||||||||| | |||
Sbjct: 566 gccattgaagatctggagaagcccgacagggttttgataggcgggcgggagaccgcggag 625
Query: 644 ggcaggaaagccgtccaggctctcaaggatgtgtacgctcactgggttcccgaggacagg 703
||| ||| |||||| ||| || |||| || || || |||||||| || |||||| |
Sbjct: 626 ggccagaaggccgtcgcggcgctgaaggcggtttatgcccactgggtaccggaggaccga 685
Query: 704 atcctcaccaccaacctgtggtctgctgagctctccaagctcgctgccaacgcgttcctg 763
||| |||||| || || ||||| || ||||| || ||||| || || || || ||| ||
Sbjct: 686 atcatcaccatgaatctctggtccgccgagctgtcgaagctggccgcgaatgctttcttg 745
Query: 764 gcacagaggatctcctctgtgaacgccatctccgccctctgcgaggccac 813
|| |||||||| || |||||||| ||||| ||||||||||||||||||||
Sbjct: 746 gcgcagaggatttcgtctgtgaatgccatgtccgccctctgcgaggccac 795
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 77 atggtgaagatctgctgcatcgg 99
>gb|AW985236.1|AW985236 NXNV_132_G09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_132_G09 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 450
Score = 101 bits (51), Expect = 1e-019
Identities = 192/239 (80%)
Strand = Plus / Plus
Query: 233 ctgccaatctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcaggaacctc 292
||||||||||| ||||||||||| ||||| || || ||| ||||| || | ||| |
Sbjct: 59 ctgccaatctatgagcctggtcttgatgaagtcgtaaagggttgcagagggaaaaacttg 118
Query: 293 ttcttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtg 352
|| |||||| ||||||| |||||||| || || ||||||||||| ||||| || |||
Sbjct: 119 tttttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtg 178
Query: 353 aacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgg 412
||||| ||||| || ||||| || ||||| ||||| |||||||| || || || || |||
Sbjct: 179 aacacacccactaaaacccggggtcttggggctgggaaggctgcagatctaacatattgg 238
Query: 413 gagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
|| ||||| || || |||||||||||||| || || |||||||| |||||||| |||||
Sbjct: 239 gaaagcgcagctcgaatgattgcggatgtttcaaaatctgacaaaattgttgtggagaa 297
>gb|BX250886.1|BX250886 BX250886 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP042E05 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 676
Score = 95.6 bits (48), Expect = 7e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 296 ttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaac 355
|||||| ||||||| |||||||| || || ||||||||||| ||||| || ||||||
Sbjct: 335 ttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtgaac 394
Query: 356 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 415
|| ||||| || ||||| || ||||| ||||| |||||||| || || ||||| |||||
Sbjct: 395 acacccactaaaacccggggtcttggggctgggaaggctgcagatctaacctattgggaa 454
Query: 416 agcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
||||| || || ||||||||||| || || || |||||||| |||||||| |||||
Sbjct: 455 agcgcagctcgaatgattgcggacgtttcaaaatctgacaaaattgttgtggagaa 510
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
||||||||||||||||| | || ||||| ||||| ||||| ||||| |||||| |||||
Sbjct: 134 atggtgaagatctgctgtcttggagctggatatgttggtgggccaacaatggccatcatt 193
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgt 189
|| || || || || | |||||| ||||| |||||
Sbjct: 194 gcactaaaatgtcctgccattgaagtcgttgtcgt 228
>gb|BX251300.1|BX251300 BX251300 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP047H06 similar to UDP GLUCOSE 6
DEHYDROGENASE, mRNA sequence
Length = 672
Score = 95.6 bits (48), Expect = 7e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 296 ttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaac 355
|||||| ||||||| |||||||| || || ||||||||||| ||||| || ||||||
Sbjct: 84 ttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtgaac 143
Query: 356 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 415
|| ||||| || ||||| || ||||| ||||| |||||||| || || ||||| |||||
Sbjct: 144 acacccactaaaacccggggtcttggggctgggaaggctgcagatctaacctattgggaa 203
Query: 416 agcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
||||| || || ||||||||||| || || || |||||||| |||||||| |||||
Sbjct: 204 agcgcagctcgaatgattgcggacgtttcaaaatctgacaaaattgttgtggagaa 259
>gb|CF668609.1|CF668609 RTCNT1_37_C09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_37_C09_A029 5', mRNA sequence
Length = 746
Score = 95.6 bits (48), Expect = 7e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 296 ttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaac 355
|||||| ||||||| |||||||| || || ||||||||||| ||||| || ||||||
Sbjct: 302 ttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtgaac 361
Query: 356 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 415
|| ||||| || ||||| || ||||| ||||| |||||||| || || || || |||||
Sbjct: 362 acacccactaaaacccggggtcttggggctgggaaggctgcagatctaacatattgggaa 421
Query: 416 agcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
||||| || || |||||||||||||| || || |||||||| |||||||| |||||
Sbjct: 422 agcgcagctcgaatgattgcggatgtttcaaaatctgacaaaattgttgtggagaa 477
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
||||||||||||||||| | || ||||| ||||| ||||| ||||| |||||| |||||
Sbjct: 101 atggtgaagatctgctgtcttggagctggatatgttggtgggccaacaatggccatcatt 160
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgt 189
|| || || || || | |||||| ||||| |||||
Sbjct: 161 gcactaaaatgtcctgccattgaagtcgttgtcgt 195
>gb|CX712437.1|CX712437 RTPQ1_2_B10.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_B10_A032 5', mRNA sequence
Length = 859
Score = 95.6 bits (48), Expect = 7e-018
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 296 ttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaac 355
|||||| ||||||| |||||||| || || ||||||||||| ||||| || ||||||
Sbjct: 307 ttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtgaac 366
Query: 356 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 415
|| ||||| || ||||| || ||||| ||||| |||||||| || || || || |||||
Sbjct: 367 acacccactaaaacccggggtcttggggctgggaaggctgcagatctaacatattgggaa 426
Query: 416 agcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
||||| || || |||||||||||||| || || |||||||| |||||||| |||||
Sbjct: 427 agcgcagctcgaatgattgcggatgtttcaaaatctgacaaaattgttgtggagaa 482
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
||||||||||||||||| | || ||||| ||||| ||||| ||||| |||||| |||||
Sbjct: 106 atggtgaagatctgctgtcttggagctggatatgttggtgggccaacaatggccatcatt 165
Query: 155 gccctcaagtgcccagacattgaggtcgtcgtcgt 189
|| || || || || | |||||| ||||| |||||
Sbjct: 166 gcactaaaatgtcctgccattgaagtcgttgtcgt 200
>gb|CV145560.1|CV145560 EST856769 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDK03 5' end, mRNA sequence
Length = 837
Score = 93.7 bits (47), Expect = 3e-017
Identities = 155/191 (81%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 301 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 360
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 361 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 420
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 421 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 480
Query: 524 aacagcaaggg 534
|||| ||||||
Sbjct: 481 aacaacaaggg 491
Score = 69.9 bits (35), Expect = 4e-010
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 640 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 699
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 700 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 759
Query: 803 tgcgaggccac 813
|||||||||||
Sbjct: 760 tgcgaggccac 770
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 52 atggtgaagatctgctgcatcgg 74
>gb|DN454648.1|DN454648 EST950447 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG582 5' end, mRNA sequence
Length = 896
Score = 93.7 bits (47), Expect = 3e-017
Identities = 155/191 (81%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 304 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 363
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 364 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 423
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 424 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 483
Query: 524 aacagcaaggg 534
|||| ||||||
Sbjct: 484 aacaacaaggg 494
Score = 69.9 bits (35), Expect = 4e-010
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 643 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 702
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 703 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 762
Query: 803 tgcgaggccac 813
|||||||||||
Sbjct: 763 tgcgaggccac 773
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 55 atggtgaagatctgctgcatcgg 77
>gb|DN455552.1|DN455552 EST951351 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGF47 5' end, mRNA sequence
Length = 939
Score = 93.7 bits (47), Expect = 3e-017
Identities = 155/191 (81%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 299 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 358
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 359 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 418
Query: 464 gttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatcttgacccac 523
|| ||||| || || || || || || ||||| || || || |||||||| | ||||||
Sbjct: 419 gtggagaaatcgacggtgccggtgaaaaccgcagaagcgatcgagaagattctcacccac 478
Query: 524 aacagcaaggg 534
|||| ||||||
Sbjct: 479 aacaacaaggg 489
Score = 91.7 bits (46), Expect = 1e-016
Identities = 238/302 (78%)
Strand = Plus / Plus
Query: 683 cactgggttcccgaggacaggatcctcaccaccaacctgtggtctgctgagctctccaag 742
|||||||| || |||||| | ||| |||||| || || ||||| || ||||| || |||
Sbjct: 638 cactgggtaccggaggaccgaatcatcaccatgaatctctggtccgccgagctgtcgaag 697
Query: 743 ctcgctgccaacgcgttcctggcacagaggatctcctctgtgaacgccatctccgccctc 802
|| || || || || ||| |||| |||||||| || |||||||| ||||| |||||||||
Sbjct: 698 ctggccgcgaatgctttcttggcgcagaggatttcgtctgtgaatgccatgtccgccctc 757
Query: 803 tgcgaggccaccggcgcgaatgtgactgaggtggcttacgccgtgggcaaggacacgagg 862
||||||||||| || || | ||| |||| || || || ||||| || || || | ||
Sbjct: 758 tgcgaggccacaggggccgacgtggctgaagtcgcatatgccgtcgggaaagattctcgg 817
Query: 863 attggccccaagttcctgaacgccagtgttgggttcggtgggtcttgcttccagaaggac 922
|| || ||| ||| ||||| |||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 818 atcggaccccggtttctgaattccagtgttggattcggcgggtcgtgctttcagaaagat 877
Query: 923 atcctgaacctggtgtacatctgcgagtgcaatggcctgcccgaggtggccaactactgg 982
||| |||| ||||||||||||| || |||||||| ||| | || |||||||| ||||||
Sbjct: 878 atcttgaatttggtgtacatctgtgaatgcaatgggctgtcggatgtggccaattactgg 937
Query: 983 aa 984
||
Sbjct: 938 aa 939
Score = 46.1 bits (23), Expect = 0.006
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcgg 117
|||||||||||||||||||||||
Sbjct: 50 atggtgaagatctgctgcatcgg 72
>gb|BX255050.1|BX255050 BX255050 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP109H04, mRNA sequence
Length = 569
Score = 87.7 bits (44), Expect = 2e-015
Identities = 221/280 (78%)
Strand = Plus / Plus
Query: 90 acaaaatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccg 149
|||| ||||||||| ||||||||||||| || || ||||| |||||||| |||||||| |
Sbjct: 196 acaagatggtgaaggtctgctgcatcggagcagggtatgtgggtggccccaccatggctg 255
Query: 150 tcattgccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgca 209
| || || || || ||||| | |||||| ||||| || ||||||||||| |||| || |
Sbjct: 256 tgatagctctgaaatgccccgccattgaagtcgtagtagttgacatctctgagcctcgga 315
Query: 210 ttgaggcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtga 269
|||| || |||||||| || || || ||||| || ||||| || ||||| ||||| |
Sbjct: 316 ttgacgcgtggaacagcgatcagcttccgatctatgaacctggccttgatgaagttgtca 375
Query: 270 agcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgagg 329
| |||||||| | |||||||| ||||| | |||||||||||||| || ||||| |
Sbjct: 376 aagcctgcaggggaaaaaacctctttttcagttccgatgttgagaagcatgttgctgaag 435
Query: 330 ctgacattatctttgtctcggtgaacacccccaccaagac 369
| |||||| | || || || || ||||||||||| |||||
Sbjct: 436 ccgacattgtgttcgtttcagtaaacacccccacgaagac 475
>gb|AW784126.1|AW784126 NXNV_103_D08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_103_D08 5' similar to Arabidopsis thaliana
sequence At5g15490 UDP-glucose dehydrogenase-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 263
Score = 87.7 bits (44), Expect = 2e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 15 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 74
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 75 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 134
Query: 464 gttgagaa 471
|| |||||
Sbjct: 135 gtggagaa 142
>gb|BG832837.1|BG832837 NXPV_081_C11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_081_C11 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 418
Score = 87.7 bits (44), Expect = 2e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 130 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 189
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 190 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 249
Query: 464 gttgagaa 471
|| |||||
Sbjct: 250 gtggagaa 257
>gb|BQ635289.1|BQ635289 NXRV078_E04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV078_E04 5' similar to Arabidopsis thaliana
sequence At5g39320 UDP-glucose dehydrogenase-like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 486
Score = 87.7 bits (44), Expect = 2e-015
Identities = 185/232 (79%)
Strand = Plus / Plus
Query: 1020 ggttcgtgaaccgcgtcgtgtcgtccatgttcaacaccgtcgccggcaagaagatcgccg 1079
|||| |||||| | |||||||| || |||||||| ||||| | ||||||||||| || |
Sbjct: 2 ggtttgtgaacagggtcgtgtcatcgatgttcaataccgtgtcgggcaagaagattgcgg 61
Query: 1080 tcctcggcttcgccttcaagaaggacaccggcgacaccagggagaccccggccatcgatg 1139
|| | || || || |||||||| || ||||| || || || || || | ||||| ||||
Sbjct: 62 tcttagggtttgcgttcaagaaagataccggggatactagagaaactgctgccattgatg 121
Query: 1140 tctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccccaggtgacgg 1199
||||| | || ||||||| |||| ||| ||| | ||||||||||| || ||||| || |
Sbjct: 122 tctgccatgggttgctgggggacagggcacagctgagcatctacgatccgcaggtaacag 181
Query: 1200 aggaccagatccagcgggacctggccatgaacaagttcgactgggaccaccc 1251
|||| ||||||| | |||| || ||||||||||||||||| ||||| |||||
Sbjct: 182 aggatcagatccggagggatcttgccatgaacaagttcgattgggatcaccc 233
>gb|BQ696241.1|BQ696241 NXPV_037_A06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_A06 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 475
Score = 87.7 bits (44), Expect = 2e-015
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 344 gtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggctgccgacctc 403
||||| || ||||| || ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 130 gtctccgtcaacacgcctaccaagacccgtgggctcggcgccggcaaggcagccgacctg 189
Query: 404 acctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgacaagattgtt 463
||||||||||| || ||||| ||||| ||||| || || ||||| ||||||||||||
Sbjct: 190 acctactgggaatcggccgcccggatgatcgcggacgtgtcgaagtcggacaagattgtt 249
Query: 464 gttgagaa 471
|| |||||
Sbjct: 250 gtggagaa 257
>gb|DR180298.1|DR180298 RTMNUT1_27_E10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_27_E10_A029 5', mRNA sequence
Length = 688
Score = 87.7 bits (44), Expect = 2e-015
Identities = 143/176 (81%)
Strand = Plus / Plus
Query: 296 ttcagcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaac 355
|||||| ||||||| |||||||| || || ||||||||||| ||||| || ||||||
Sbjct: 290 ttcagctctgatgtggagaagcatgttttggaagctgacattatatttgtgtctgtgaac 349
Query: 356 acccccaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggag 415
|| ||||| || ||||| || ||||| ||||| |||||||| || || || || |||||
Sbjct: 350 acacccactaaaacccggggtcttggggctgggaaggctgcagatctaacatattgggaa 409
Query: 416 agcgctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaa 471
|| || || || |||||||||||||| || || |||||||| |||||||| |||||
Sbjct: 410 agtgcagctcgaatgattgcggatgtttcaaaatctgacaaaattgttgtggagaa 465
Score = 52.0 bits (26), Expect = 1e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 95 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 154
||||||||||||||||| | || ||||| ||||| ||||| ||||| |||||| |||||
Sbjct: 91 atggtgaagatctgctgtcttggagctggatatgttggtgggccaacaatggccatcatt 150
Query: 155 gc 156
||
Sbjct: 151 gc 152
>gb|BG832474.1|BG832474 NXPV_073_C06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_073_C06 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 468
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 54 gccattgatgtctgccatgggttgctgggagacagggcacagctgagcatctacgatccg 113
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 114 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 173
Query: 1250 cc 1251
||
Sbjct: 174 cc 175
Score = 40.1 bits (20), Expect = 0.37
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 1358 tgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgcc 1417
||||| |||||||||| |||||| ||| ||||||| || || ||| |||| ||||||
Sbjct: 282 tgggatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgcc 341
Query: 1418 ttcgtcttcgacggccgcaa 1437
||||| ||||| || |||||
Sbjct: 342 ttcgtattcgatggtcgcaa 361
>gb|BQ696271.1|BQ696271 NXPV_037_D02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_037_D02 5' similar to Arabidopsis
thaliana sequence At5g15490 UDP-glucose
dehydrogenase-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 558
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 24 gccattgatgtctgccatgggttgctgggagacagggcacagctgagcatctacgatccg 83
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 84 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 143
Query: 1250 cc 1251
||
Sbjct: 144 cc 145
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 195 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 254
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 255 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 314
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 315 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 361
>gb|CF390890.1|CF390890 RTDR3_2_G07.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_G07_A022 5', mRNA sequence
Length = 791
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 58 gccattgatgtctgccatgggttgctgggagacagggcacagctgagcatctacgatccg 117
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 118 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 177
Query: 1250 cc 1251
||
Sbjct: 178 cc 179
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 229 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 288
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 289 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 348
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 349 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 395
>gb|CF391347.1|CF391347 RTDR3_1_F02.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_F02_A022 3', mRNA sequence
Length = 676
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 21 gccattgatgtctgccatgggttgctgggggacagggcacagctgagcatctacgatccg 80
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 81 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 140
Query: 1250 cc 1251
||
Sbjct: 141 cc 142
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 192 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 251
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 252 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 311
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 312 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 358
>gb|CO200327.1|CO200327 GEO2_6_F09.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_6_F09_A032 5', mRNA sequence
Length = 817
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 31 gccattgatgtctgccatgggttgctgggggacagggcacagctgagcatctacgatccg 90
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 91 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 150
Query: 1250 cc 1251
||
Sbjct: 151 cc 152
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 202 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 261
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 262 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 321
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 322 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 368
>gb|DR024998.1|DR024998 STRS1_69_A06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_A06_A034 3', mRNA sequence
Length = 841
Score = 75.8 bits (38), Expect = 7e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 1130 gccatcgatgtctgcaagggcctgctgggtgacaaggcccagatcagcatctacgacccc 1189
||||| ||||||||| | || ||||||| |||| ||| ||| | ||||||||||| ||
Sbjct: 18 gccattgatgtctgccatgggttgctgggggacagggcacagctgagcatctacgatccg 77
Query: 1190 caggtgacggaggaccagatccagcgggacctggccatgaacaagttcgactgggaccac 1249
||||| || ||||| ||||||| | |||| || ||||||||||||||||| ||||| |||
Sbjct: 78 caggtaacagaggatcagatccggagggatcttgccatgaacaagttcgattgggatcac 137
Query: 1250 cc 1251
||
Sbjct: 138 cc 139
Score = 54.0 bits (27), Expect = 2e-005
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 1301 gtgtgggacgcgtacgaggccaccaagggcgcccacgggctgtgcatcctgaccgagtgg 1360
|||||||| || || |||||||||||| || |||||| | || || || || || |||
Sbjct: 189 gtgtgggatgcttatgaggccaccaagaatgctcacggggtctgtattcttactgaatgg 248
Query: 1361 gacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcccgccttc 1420
|| |||||||||| |||||| ||| ||||||| || || ||| |||| |||||||||
Sbjct: 249 gatgagttcaagaacctggattacggtaagatctatgagaatatggagaaacccgccttc 308
Query: 1421 gtcttcgacggccgcaacatcgtcgactccgagaagctgagggagat 1467
|| ||||| || ||||| |||| || |||||||||||||| ||||
Sbjct: 309 gtattcgatggtcgcaatgtcgtagatgccgagaagctgaggaagat 355
>gb|AW289445.1|AW289445 NXNV001A12F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV001A12 5', mRNA sequence
Length = 483
Score = 71.9 bits (36), Expect = 1e-010
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 452 gacaagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaag 511
||||| ||||| |||||||| ||||| || ||||| || || |||||||| ||||| |||
Sbjct: 31 gacaaaattgtcgttgagaaatccacagttcctgttaaaacagctgaggcaattgaaaag 90
Query: 512 atcttgacccacaacagcaagggcatcaactaccagatcctttccaacccagagtt 567
|| || ||||||||||||||||| || || || || || ||||| ||||| |||||
Sbjct: 91 attttaacccacaacagcaaggggattaattatcaaattctttctaaccctgagtt 146
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 231,581
Number of Sequences: 355925
Number of extensions: 231581
Number of successful extensions: 58455
Number of sequences better than 0.5: 131
Number of HSP's better than 0.5 without gapping: 130
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 58081
Number of HSP's gapped (non-prelim): 302
length of query: 2175
length of database: 217,277,237
effective HSP length: 20
effective length of query: 2155
effective length of database: 210,158,737
effective search space: 452892078235
effective search space used: 452892078235
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)