BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.1
(1225 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF394731.1|CF394731 RTDS2_7_D11.b1_A021 Drought-stressed... 54 1e-005
gb|CF394766.1|CF394766 RTDS2_7_D11.g1_A021 Drought-stressed... 54 1e-005
gb|CF395858.1|CF395858 RTDS2_17_G08.g1_A021 Drought-stresse... 54 1e-005
gb|CF397727.1|CF397727 RTDS3_1_F07.b2_A022 Drought-stressed... 54 1e-005
gb|CF397769.1|CF397769 RTDS3_1_F07.g1_A022 Drought-stressed... 54 1e-005
gb|CF470865.1|CF470865 RTDS1_15_F04.b1_A015 Drought-stresse... 54 1e-005
gb|CF470916.1|CF470916 RTDS1_15_F04.g1_A015 Drought-stresse... 54 1e-005
gb|CF471723.1|CF471723 RTDS1_6_H09.b1_A015 Drought-stressed... 54 1e-005
gb|CF471728.1|CF471728 RTDS1_6_A03.b1_A015 Drought-stressed... 54 1e-005
gb|CF471738.1|CF471738 RTDS1_6_H09.g1_A015 Drought-stressed... 54 1e-005
gb|CF663803.1|CF663803 RTCNT1_5_E11.b1_A029 Root control Pi... 54 1e-005
gb|CF663873.1|CF663873 RTCNT1_5_E11.g1_A029 Root control Pi... 54 1e-005
gb|CF669102.1|CF669102 RTCNT1_40_D11.g1_A029 Root control P... 54 1e-005
gb|CR393567.1|CR393567 CR393567 RN Pinus pinaster cDNA clon... 54 1e-005
gb|CO197765.1|CO197765 GEO1_9_A02.b1_A029 Root gravitropism... 54 1e-005
gb|CO367788.1|CO367788 RTK1_36_D07.g1_A029 Roots minus pota... 54 1e-005
gb|CV034844.1|CV034844 RTNACL1_12_B05.b1_A029 Roots plus ad... 54 1e-005
gb|CV034924.1|CV034924 RTNACL1_12_B05.g1_A029 Roots plus ad... 54 1e-005
gb|CX653114.1|CX653114 COLD1_63_B04.g1_A029 Root cold Pinus... 54 1e-005
gb|DN462126.1|DN462126 EST957925 Sequencing ESTs from loblo... 54 1e-005
gb|DR015706.1|DR015706 STRS1_5_D08.b1_A034 Shoot tip pitch ... 54 1e-005
gb|DR024903.1|DR024903 STRS1_68_G02.b1_A034 Shoot tip pitch... 54 1e-005
gb|DR024985.1|DR024985 STRS1_68_G02.g1_A034 Shoot tip pitch... 54 1e-005
gb|DR025521.1|DR025521 STRS1_72_D04.b1_A034 Shoot tip pitch... 54 1e-005
gb|DR025600.1|DR025600 STRS1_72_D04.g1_A034 Shoot tip pitch... 54 1e-005
gb|DR079317.1|DR079317 RTFEPL1_10_B07.g1_A029 Roots plus ad... 54 1e-005
gb|DR093118.1|DR093118 STRR1_6_D06.b1_A033 Stem Response Re... 54 1e-005
gb|DR093189.1|DR093189 STRR1_6_D06.g1_A033 Stem Response Re... 54 1e-005
gb|DR094225.1|DR094225 STRR1_13_F04.b1_A033 Stem Response R... 54 1e-005
gb|DR097063.1|DR097063 STRR1_32_F04.b1_A033 Stem Response R... 54 1e-005
gb|DR097134.1|DR097134 STRR1_32_F04.g1_A033 Stem Response R... 54 1e-005
gb|DR101305.1|DR101305 STRR1_72_A07.b1_A033 Stem Response R... 54 1e-005
gb|DR102505.1|DR102505 STRR1_81_D01.g1_A033 Stem Response R... 54 1e-005
gb|DR385774.1|DR385774 RTHG1_10_F10.g1_A029 Roots plus adde... 54 1e-005
gb|DR387500.1|DR387500 RTHG1_22_E09.b1_A029 Roots plus adde... 54 1e-005
gb|DR094599.1|DR094599 STRR1_15_C09.g1_A033 Stem Response R... 50 2e-004
gb|DR094950.1|DR094950 STRR1_17_G05.g1_A033 Stem Response R... 50 2e-004
gb|CF391842.1|CF391842 RTDR3_10_B11.b1_A022 Loblolly pine r... 46 0.003
gb|CF392844.1|CF392844 RTDR3_19_A02.g1_A022 Loblolly pine r... 46 0.003
gb|CF397691.1|CF397691 RTDS3_1_A01.b2_A022 Drought-stressed... 46 0.003
gb|CF398352.1|CF398352 RTDS3_12_F06.b1_A022 Drought-stresse... 46 0.003
gb|CF470438.1|CF470438 RTDS1_17_H03.g1_A015 Drought-stresse... 46 0.003
gb|CF471984.1|CF471984 RTDS1_7_F08.g1_A015 Drought-stressed... 46 0.003
gb|CF472390.1|CF472390 RTDS1_9_G12.g1_A015 Drought-stressed... 46 0.003
gb|CF472839.1|CF472839 RTDS1_12_B01.b1_A015 Drought-stresse... 46 0.003
gb|CF472913.1|CF472913 RTDS1_12_B01.g1_A015 Drought-stresse... 46 0.003
gb|CF665503.1|CF665503 RTCNT1_16_H12.b1_A029 Root control P... 46 0.003
gb|CF665579.1|CF665579 RTCNT1_16_H12.g1_A029 Root control P... 46 0.003
gb|CF665639.1|CF665639 RTCNT1_17_F09.b1_A029 Root control P... 46 0.003
gb|CF667816.1|CF667816 RTCNT1_32_E06.g1_A029 Root control P... 46 0.003
gb|CF670863.1|CF670863 RTCNT1_53_C09.b1_A029 Root control P... 46 0.003
gb|CF670936.1|CF670936 RTCNT1_53_C09.g1_A029 Root control P... 46 0.003
gb|CF671031.1|CF671031 RTCNT1_54_E11.b1_A029 Root control P... 46 0.003
gb|CF671101.1|CF671101 RTCNT1_54_E11.g1_A029 Root control P... 46 0.003
gb|CF672127.1|CF672127 RTCNT1_61_C03.g1_A029 Root control P... 46 0.003
gb|BX679188.1|BX679188 BX679188 RS Pinus pinaster cDNA clon... 46 0.003
gb|CO159298.1|CO159298 FLD1_12_E09.g1_A029 Root flooded Pin... 46 0.003
gb|CO160130.1|CO160130 FLD1_19_A05.b1_A029 Root flooded Pin... 46 0.003
gb|CO160203.1|CO160203 FLD1_19_A05.g1_A029 Root flooded Pin... 46 0.003
gb|CO160513.1|CO160513 FLD1_21_B12.g1_A029 Root flooded Pin... 46 0.003
gb|CO161579.1|CO161579 FLD1_29_G02.g1_A029 Root flooded Pin... 46 0.003
gb|CO161755.1|CO161755 FLD1_31_A05.b1_A029 Root flooded Pin... 46 0.003
gb|CO162290.1|CO162290 FLD1_34_H08.b1_A029 Root flooded Pin... 46 0.003
gb|CO162374.1|CO162374 FLD1_34_H08.g1_A029 Root flooded Pin... 46 0.003
gb|CO162463.1|CO162463 FLD1_35_A09.g1_A029 Root flooded Pin... 46 0.003
gb|CO162468.1|CO162468 FLD1_35_B02.g1_A029 Root flooded Pin... 46 0.003
gb|CO164896.1|CO164896 FLD1_51_B04.b1_A029 Root flooded Pin... 46 0.003
gb|CO164972.1|CO164972 FLD1_51_B04.g1_A029 Root flooded Pin... 46 0.003
gb|CO166349.1|CO166349 FLD1_61_G07.b1_A029 Root flooded Pin... 46 0.003
gb|CO166415.1|CO166415 FLD1_61_G07.g1_A029 Root flooded Pin... 46 0.003
gb|CO167643.1|CO167643 FLD1_70_F02.b1_A029 Root flooded Pin... 46 0.003
gb|CO167766.1|CO167766 FLD1_71_B08.b1_A029 Root flooded Pin... 46 0.003
gb|CO167929.1|CO167929 FLD1_72_E05.b1_A029 Root flooded Pin... 46 0.003
gb|CO168011.1|CO168011 FLD1_72_E05.g1_A029 Root flooded Pin... 46 0.003
gb|CO197688.1|CO197688 GEO1_8_G03.b1_A029 Root gravitropism... 46 0.003
gb|CO198551.1|CO198551 GEO1_14_B12.g1_A029 Root gravitropis... 46 0.003
gb|CO198871.1|CO198871 GEO1_17_E04.b1_A029 Root gravitropis... 46 0.003
gb|CO368988.1|CO368988 RTK1_44_E07.b1_A029 Roots minus pota... 46 0.003
gb|CV032043.1|CV032043 RTNACL1_5_H06.b1_A029 Roots plus add... 46 0.003
gb|CV033933.1|CV033933 RTNACL1_37_B07.g1_A029 Roots plus ad... 46 0.003
gb|CV035397.1|CV035397 RTNACL1_15_G01.g1_A029 Roots plus ad... 46 0.003
gb|CV035407.1|CV035407 RTNACL1_15_H01.g1_A029 Roots plus ad... 46 0.003
gb|CV036323.1|CV036323 RTNACL1_58_H12.b1_A029 Roots plus ad... 46 0.003
gb|CV036557.1|CV036557 RTNACL1_60_C09.b1_A029 Roots plus ad... 46 0.003
gb|CV136511.1|CV136511 EST847720 Sequencing ESTs from loblo... 46 0.003
gb|CX648684.1|CX648684 COLD1_30_F03.b1_A029 Root cold Pinus... 46 0.003
gb|CX713823.1|CX713823 RTPQ1_13_D02.g1_A032 Roots treated w... 46 0.003
gb|CX715093.1|CX715093 RTPQ1_31_D09.b1_A032 Roots treated w... 46 0.003
gb|CX715134.1|CX715134 RTPQ1_31_D09.g1_A032 Roots treated w... 46 0.003
gb|DN450568.1|DN450568 EST946367 Sequencing ESTs from loblo... 46 0.003
gb|DN459511.1|DN459511 EST955310 Sequencing ESTs from loblo... 46 0.003
gb|DN464308.1|DN464308 EST960107 Sequencing ESTs from loblo... 46 0.003
gb|DR010833.1|DR010833 HEAT1_1_D01.g1_A029 Root at 37 C for... 46 0.003
gb|DR011184.1|DR011184 HEAT1_4_C10.b1_A029 Root at 37 C for... 46 0.003
gb|DR011226.1|DR011226 HEAT1_4_H01.b1_A029 Root at 37 C for... 46 0.003
gb|DR011256.1|DR011256 HEAT1_4_C10.g1_A029 Root at 37 C for... 46 0.003
gb|DR012513.1|DR012513 HEAT1_13_G10.b1_A029 Root at 37 C fo... 46 0.003
gb|DR012593.1|DR012593 HEAT1_13_G10.g1_A029 Root at 37 C fo... 46 0.003
gb|DR013746.1|DR013746 HEAT1_21_F06.b1_A029 Root at 37 C fo... 46 0.003
gb|DR013826.1|DR013826 HEAT1_21_F06.g1_A029 Root at 37 C fo... 46 0.003
gb|DR014076.1|DR014076 HEAT1_23_F04.b1_A029 Root at 37 C fo... 46 0.003
gb|DR015714.1|DR015714 STRS1_5_E05.b1_A034 Shoot tip pitch ... 46 0.003
gb|DR015796.1|DR015796 STRS1_5_E05.g1_A034 Shoot tip pitch ... 46 0.003
gb|DR016280.1|DR016280 STRS1_9_D12.b1_A034 Shoot tip pitch ... 46 0.003
gb|DR018110.1|DR018110 STRS1_20_C02.g1_A034 Shoot tip pitch... 46 0.003
gb|DR019767.1|DR019767 STRS1_32_F12.b1_A034 Shoot tip pitch... 46 0.003
gb|DR019844.1|DR019844 STRS1_32_F12.g1_A034 Shoot tip pitch... 46 0.003
gb|DR021193.1|DR021193 STRS1_43_B03.b1_A034 Shoot tip pitch... 46 0.003
gb|DR021267.1|DR021267 STRS1_43_B03.g1_A034 Shoot tip pitch... 46 0.003
gb|DR021628.1|DR021628 STRS1_46_A01.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022276.1|DR022276 STRS1_50_A11.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022290.1|DR022290 STRS1_50_C06.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022470.1|DR022470 STRS1_51_F12.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022620.1|DR022620 STRS1_52_G02.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022759.1|DR022759 STRS1_53_G01.b1_A034 Shoot tip pitch... 46 0.003
gb|DR023505.1|DR023505 STRS1_58_D03.b1_A034 Shoot tip pitch... 46 0.003
gb|DR023582.1|DR023582 STRS1_58_E02.g1_A034 Shoot tip pitch... 46 0.003
gb|DR023704.1|DR023704 STRS1_59_B02.g1_A034 Shoot tip pitch... 46 0.003
gb|DR024298.1|DR024298 STRS1_63_H08.g1_A034 Shoot tip pitch... 46 0.003
gb|DR025551.1|DR025551 STRS1_72_G03.b1_A034 Shoot tip pitch... 46 0.003
gb|DR025560.1|DR025560 STRS1_72_H03.b1_A034 Shoot tip pitch... 46 0.003
gb|DR025632.1|DR025632 STRS1_72_G03.g1_A034 Shoot tip pitch... 46 0.003
gb|DR025641.1|DR025641 STRS1_72_H03.g1_A034 Shoot tip pitch... 46 0.003
gb|DR069710.1|DR069710 RTDK1_9_A10.b1_A029 Roots, dark Pinu... 46 0.003
gb|DR070049.1|DR070049 RTDK1_11_A09.b1_A029 Roots, dark Pin... 46 0.003
gb|DR070127.1|DR070127 RTDK1_11_A09.g1_A029 Roots, dark Pin... 46 0.003
gb|DR070343.1|DR070343 RTDK1_12_E11.g1_A029 Roots, dark Pin... 46 0.003
gb|DR070717.1|DR070717 RTDK1_15_D09.b1_A029 Roots, dark Pin... 46 0.003
gb|DR070795.1|DR070795 RTDK1_15_D09.g1_A029 Roots, dark Pin... 46 0.003
gb|DR078516.1|DR078516 RTFEPL1_5_E05.b1_A029 Roots plus add... 46 0.003
gb|DR078594.1|DR078594 RTFEPL1_5_E05.g1_A029 Roots plus add... 46 0.003
gb|DR079397.1|DR079397 RTFEPL1_11_B05.b1_A029 Roots plus ad... 46 0.003
gb|DR079474.1|DR079474 RTFEPL1_11_B05.g1_A029 Roots plus ad... 46 0.003
gb|DR091550.1|DR091550 RTAL1_22_H10.b1_A029 Roots plus adde... 46 0.003
gb|DR092470.1|DR092470 STRR1_1_C09.g1_A033 Stem Response Re... 46 0.003
gb|DR093268.1|DR093268 STRR1_7_E03.b1_A033 Stem Response Re... 46 0.003
gb|DR093346.1|DR093346 STRR1_7_E03.g1_A033 Stem Response Re... 46 0.003
gb|DR095176.1|DR095176 STRR1_19_G04.b1_A033 Stem Response R... 46 0.003
gb|DR095937.1|DR095937 STRR1_24_D10.g1_A033 Stem Response R... 46 0.003
gb|DR096086.1|DR096086 STRR1_25_D09.g1_A033 Stem Response R... 46 0.003
gb|DR096903.1|DR096903 STRR1_31_D12.b1_A033 Stem Response R... 46 0.003
gb|DR096981.1|DR096981 STRR1_31_D12.g1_A033 Stem Response R... 46 0.003
gb|DR097202.1|DR097202 STRR1_33_E09.b1_A033 Stem Response R... 46 0.003
gb|DR097624.1|DR097624 STRR1_36_A08.b1_A033 Stem Response R... 46 0.003
gb|DR097698.1|DR097698 STRR1_36_A08.g3_A033 Stem Response R... 46 0.003
gb|DR098090.1|DR098090 STRR1_39_B12.b1_A033 Stem Response R... 46 0.003
gb|DR098109.1|DR098109 STRR1_39_D10.b1_A033 Stem Response R... 46 0.003
gb|DR098183.1|DR098183 STRR1_39_D10.g1_A033 Stem Response R... 46 0.003
gb|DR098304.1|DR098304 STRR1_40_B09.g1_A033 Stem Response R... 46 0.003
gb|DR099635.1|DR099635 STRR1_57_B03.b1_A033 Stem Response R... 46 0.003
gb|DR099699.1|DR099699 STRR1_57_C11.g1_A033 Stem Response R... 46 0.003
gb|DR099714.1|DR099714 STRR1_58_A05.b1_A033 Stem Response R... 46 0.003
gb|DR099921.1|DR099921 STRR1_60_C03.b1_A033 Stem Response R... 46 0.003
gb|DR100658.1|DR100658 STRR1_66_F07.b1_A033 Stem Response R... 46 0.003
gb|DR100827.1|DR100827 STRR1_68_D01.g1_A033 Stem Response R... 46 0.003
gb|DR101701.1|DR101701 STRR1_75_E03.b1_A033 Stem Response R... 46 0.003
gb|DR101938.1|DR101938 STRR1_76_G08.g1_A033 Stem Response R... 46 0.003
gb|DR102001.1|DR102001 STRR1_77_H11.b1_A033 Stem Response R... 46 0.003
gb|DR102174.1|DR102174 STRR1_79_C06.b1_A033 Stem Response R... 46 0.003
gb|DR102297.1|DR102297 STRR1_80_A10.b1_A033 Stem Response R... 46 0.003
gb|DR109685.1|DR109685 RTS1_4_B04.b1_A029 Roots minus sulfu... 46 0.003
gb|DR117274.1|DR117274 RTMG1_6_B02.b1_A029 Roots minus magn... 46 0.003
gb|DR117355.1|DR117355 RTMG1_6_B02.g1_A029 Roots minus magn... 46 0.003
gb|DR161748.1|DR161748 RTFE1_13_E06.g1_A029 Roots minus iro... 46 0.003
gb|DR161853.1|DR161853 RTFE1_14_G05.b1_A029 Roots minus iro... 46 0.003
gb|DR384928.1|DR384928 RTHG1_5_C04.g1_A029 Roots plus added... 46 0.003
gb|DR384966.1|DR384966 RTHG1_5_F10.g1_A029 Roots plus added... 46 0.003
gb|DR385370.1|DR385370 RTHG1_8_F05.b1_A029 Roots plus added... 46 0.003
gb|DR386106.1|DR386106 RTHG1_13_B01.b1_A029 Roots plus adde... 46 0.003
gb|DR387116.1|DR387116 RTHG1_19_C05.g1_A029 Roots plus adde... 46 0.003
gb|DR387185.1|DR387185 RTHG1_20_B12.b1_A029 Roots plus adde... 46 0.003
gb|DR387255.1|DR387255 RTHG1_20_B12.g1_A029 Roots plus adde... 46 0.003
gb|DR387957.1|DR387957 RTHG1_25_G02.b1_A029 Roots plus adde... 46 0.003
gb|DR388042.1|DR388042 RTHG1_25_G02.g1_A029 Roots plus adde... 46 0.003
gb|DR388084.1|DR388084 RTHG1_26_C02.b1_A029 Roots plus adde... 46 0.003
gb|DR388165.1|DR388165 RTHG1_26_C02.g1_A029 Roots plus adde... 46 0.003
gb|DR388179.1|DR388179 RTHG1_26_D04.g1_A029 Roots plus adde... 46 0.003
gb|DR388443.1|DR388443 RTHG1_28_G04.b1_A029 Roots plus adde... 46 0.003
gb|DR388528.1|DR388528 RTHG1_28_G04.g1_A029 Roots plus adde... 46 0.003
gb|DR742257.1|DR742257 RTCU1_2_G09.g1_A029 Roots plus added... 46 0.003
gb|DR744767.1|DR744767 RTCU1_24_F08.g1_A029 Roots plus adde... 46 0.003
gb|DT626242.1|DT626242 EST1158166 Sequencing ESTs from lobl... 46 0.003
gb|DT625347.1|DT625347 EST1159622 Sequencing ESTs from lobl... 46 0.003
gb|AF457097.1| Pinus elliottii var. elliottii Pechi270 puta... 46 0.003
gb|CF470226.1|CF470226 RTDS1_18_F12.b1_A015 Drought-stresse... 44 0.013
gb|CF665693.1|CF665693 RTCNT1_17_F09.g1_A029 Root control P... 42 0.053
gb|CF669986.1|CF669986 RTCNT1_47_H04.b1_A029 Root control P... 42 0.053
gb|CO167103.1|CO167103 FLD1_66_G09.g1_A029 Root flooded Pin... 42 0.053
gb|DR017806.1|DR017806 STRS1_18_D02.g1_A034 Shoot tip pitch... 42 0.053
gb|DR017924.1|DR017924 STRS1_19_H02.b1_A034 Shoot tip pitch... 42 0.053
gb|DR018012.1|DR018012 STRS1_20_A02.b1_A034 Shoot tip pitch... 42 0.053
gb|DR019629.1|DR019629 STRS1_31_G08.b1_A034 Shoot tip pitch... 42 0.053
gb|DR020097.1|DR020097 STRS1_34_D02.g1_A034 Shoot tip pitch... 42 0.053
gb|DR023186.1|DR023186 STRS1_56_B08.b1_A034 Shoot tip pitch... 42 0.053
gb|DR024473.1|DR024473 STRS1_65_E07.b1_A034 Shoot tip pitch... 42 0.053
gb|DR051603.1|DR051603 RTBOR1_31_E01.b1_A029 Roots plus add... 42 0.053
gb|DR094231.1|DR094231 STRR1_13_F11.b1_A033 Stem Response R... 42 0.053
gb|DR094289.1|DR094289 STRR1_13_D07.g1_A033 Stem Response R... 42 0.053
gb|DR094685.1|DR094685 STRR1_16_D03.b1_A033 Stem Response R... 42 0.053
gb|DR098192.1|DR098192 STRR1_39_E08.g1_A033 Stem Response R... 42 0.053
gb|DR100495.1|DR100495 STRR1_64_C09.g1_A033 Stem Response R... 42 0.053
gb|DR164407.1|DR164407 RTFE1_48_F02.g1_A029 Roots minus iro... 42 0.053
gb|AY500842.1| Pinus monticola class IV chitinase A (Ch4A) ... 42 0.053
gb|AY500843.1| Pinus monticola class IV chitinase Aa (Ch4A)... 42 0.053
gb|BX250179.1|BX250179 BX250179 Pinus pinaster differenciat... 40 0.21
gb|CF472976.1|CF472976 RTDS1_1_D11.b1_A015 Drought-stressed... 40 0.21
gb|CO198491.1|CO198491 GEO1_14_C03.b1_A029 Root gravitropis... 40 0.21
gb|DR011570.1|DR011570 HEAT1_6_C01.g1_A029 Root at 37 C for... 40 0.21
gb|DR015082.1|DR015082 STRS1_1_H12.b1_A034 Shoot tip pitch ... 40 0.21
gb|DR015175.1|DR015175 STRS1_1_H12.g1_A034 Shoot tip pitch ... 40 0.21
gb|DR016318.1|DR016318 STRS1_9_H09.b1_A034 Shoot tip pitch ... 40 0.21
gb|DR021485.1|DR021485 STRS1_45_B01.b1_A034 Shoot tip pitch... 40 0.21
gb|DR024145.1|DR024145 STRS1_62_D09.g1_A034 Shoot tip pitch... 40 0.21
gb|DR025452.1|DR025452 STRS1_71_E06.g1_A034 Shoot tip pitch... 40 0.21
gb|DR069154.1|DR069154 RTDK1_5_F03.b1_A029 Roots, dark Pinu... 40 0.21
gb|DR093284.1|DR093284 STRR1_7_F10.b1_A033 Stem Response Re... 40 0.21
gb|DR093363.1|DR093363 STRR1_7_F10.g1_A033 Stem Response Re... 40 0.21
gb|DR096654.1|DR096654 STRR1_29_H02.b1_A033 Stem Response R... 40 0.21
gb|DR096725.1|DR096725 STRR1_29_H02.g1_A033 Stem Response R... 40 0.21
gb|DR101168.1|DR101168 STRR1_71_B09.b1_A033 Stem Response R... 40 0.21
gb|DR101527.1|DR101527 STRR1_74_A01.b1_A033 Stem Response R... 40 0.21
gb|DR101588.1|DR101588 STRR1_74_A01.g1_A033 Stem Response R... 40 0.21
gb|DR384722.1|DR384722 RTHG1_4_D06.b1_A029 Roots plus added... 40 0.21
gb|DR388949.1|DR388949 RTHG1_31_B01.g1_A029 Roots plus adde... 40 0.21
>gb|CF394731.1|CF394731 RTDS2_7_D11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_D11_A021 3', mRNA sequence
Length = 648
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 367 gttgtccatccagaaccagaccgccgtcttgaacg 333
>gb|CF394766.1|CF394766 RTDS2_7_D11.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_D11_A021 5', mRNA sequence
Length = 684
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 667 gttgtccatccagaaccagaccgccgtcttgaacg 633
>gb|CF395858.1|CF395858 RTDS2_17_G08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_G08_A021 5', mRNA sequence
Length = 749
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 439 gttgtccatccagaaccagaccgccgtcttgaacg 405
>gb|CF397727.1|CF397727 RTDS3_1_F07.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_F07_A022 3', mRNA sequence
Length = 544
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 263 gttgtccatccagaaccagaccgccgtcttgaacg 229
>gb|CF397769.1|CF397769 RTDS3_1_F07.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_F07_A022 5', mRNA sequence
Length = 792
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 667 gttgtccatccagaaccagaccgccgtcttgaacg 633
>gb|CF470865.1|CF470865 RTDS1_15_F04.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_15_F04_A015 3', mRNA sequence
Length = 406
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| ||||||||||||||
Sbjct: 123 ttcatccagaaccagaccgccgtcttgaacg 93
>gb|CF470916.1|CF470916 RTDS1_15_F04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_15_F04_A015 5', mRNA sequence
Length = 749
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| ||||||||||||||
Sbjct: 440 ttcatccagaaccagaccgccgtcttgaacg 410
>gb|CF471723.1|CF471723 RTDS1_6_H09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_H09_A015 3', mRNA sequence
Length = 680
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 399 gttgtccatccagaaccagaccgccgtcttgaacg 365
>gb|CF471728.1|CF471728 RTDS1_6_A03.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_A03_A015 3', mRNA sequence
Length = 526
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| ||||||||||||||
Sbjct: 195 ttcatccagaaccagaccgccgtcttgaacg 165
>gb|CF471738.1|CF471738 RTDS1_6_H09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_H09_A015 5', mRNA sequence
Length = 685
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 668 gttgtccatccagaaccagaccgccgtcttgaacg 634
>gb|CF663803.1|CF663803 RTCNT1_5_E11.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_5_E11_A029 3', mRNA sequence
Length = 740
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 76 gttgtccatccagaaccagaccgccgtcttgaacg 110
>gb|CF663873.1|CF663873 RTCNT1_5_E11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_5_E11_A029 5', mRNA sequence
Length = 449
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 261 gttgtccatccagaaccagaccgccgtcttgaacg 295
>gb|CF669102.1|CF669102 RTCNT1_40_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_40_D11_A029 5', mRNA sequence
Length = 843
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 658 gttgtccatccagaaccagaccgccgtcttgaacg 624
>gb|CR393567.1|CR393567 CR393567 RN Pinus pinaster cDNA clone RN61H01, mRNA sequence
Length = 597
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 425 gttgtccatccagaaccagaccgccgtcttgaacg 391
>gb|CO197765.1|CO197765 GEO1_9_A02.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_A02_A029 3', mRNA sequence
Length = 648
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 367 gttgtccatccagaaccagaccgccgtcttgaacg 333
>gb|CO367788.1|CO367788 RTK1_36_D07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_D07_A029 5', mRNA sequence
Length = 850
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 249 gttgtccatccagaaccagaccgccgtcttgaacg 283
>gb|CV034844.1|CV034844 RTNACL1_12_B05.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_B05_A029 3', mRNA sequence
Length = 786
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 120 gttgtccatccagaaccagaccgccgtcttgaacg 154
>gb|CV034924.1|CV034924 RTNACL1_12_B05.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_12_B05_A029 5', mRNA sequence
Length = 730
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 265 gttgtccatccagaaccagaccgccgtcttgaacg 299
>gb|CX653114.1|CX653114 COLD1_63_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_B04_A029 5', mRNA sequence
Length = 856
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 659 gttgtccatccagaaccagaccgccgtcttgaacg 625
>gb|DN462126.1|DN462126 EST957925 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIII63 5' end, mRNA sequence
Length = 771
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 649 gttgtccatccagaaccagaccgccgtcttgaacg 615
>gb|DR015706.1|DR015706 STRS1_5_D08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D08_A034 3', mRNA sequence
Length = 549
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 268 gttgtccatccagaaccagaccgccgtcttgaacg 234
>gb|DR024903.1|DR024903 STRS1_68_G02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_G02_A034 3', mRNA sequence
Length = 752
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| ||||||||||||||
Sbjct: 470 ttcatccagaaccagaccgccgtcttgaacg 440
>gb|DR024985.1|DR024985 STRS1_68_G02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_G02_A034 5', mRNA sequence
Length = 822
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| ||||||||||||||
Sbjct: 628 ttcatccagaaccagaccgccgtcttgaacg 598
>gb|DR025521.1|DR025521 STRS1_72_D04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_72_D04_A034 3', mRNA sequence
Length = 800
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 244 gttgtccatccagaaccagaccgccgtcttgaacg 278
>gb|DR025600.1|DR025600 STRS1_72_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_72_D04_A034 5', mRNA sequence
Length = 623
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 246 gttgtccatccagaaccagaccgccgtcttgaacg 280
>gb|DR079317.1|DR079317 RTFEPL1_10_B07.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_B07_A029 5', mRNA sequence
Length = 632
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 279 gttgtccatccagaaccagaccgccgtcttgaacg 245
>gb|DR093118.1|DR093118 STRR1_6_D06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_D06_A033 3', mRNA sequence
Length = 925
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 259 gttgtccatccagaaccagaccgccgtcttgaacg 293
>gb|DR093189.1|DR093189 STRR1_6_D06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_D06_A033 5', mRNA sequence
Length = 898
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 297 gttgtccatccagaaccagaccgccgtcttgaacg 331
>gb|DR094225.1|DR094225 STRR1_13_F04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_13_F04_A033 3', mRNA sequence
Length = 249
Score = 54.0 bits (27), Expect = 1e-005
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
||||||||||||||||| |||||||||||||
Sbjct: 72 ttcatccagaaccagagagccgtcttgaacg 42
>gb|DR097063.1|DR097063 STRR1_32_F04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_F04_A033 3', mRNA sequence
Length = 757
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 465 gttgtccatccagaaccagaccgccgtcttgaacg 431
>gb|DR097134.1|DR097134 STRR1_32_F04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_F04_A033 5', mRNA sequence
Length = 712
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 421 gttgtccatccagaaccagaccgccgtcttgaacg 387
>gb|DR101305.1|DR101305 STRR1_72_A07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_72_A07_A033 3', mRNA sequence
Length = 831
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 508 gttgtccatccagaaccagaccgccgtcttgaacg 474
>gb|DR102505.1|DR102505 STRR1_81_D01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_D01_A033 5', mRNA sequence
Length = 392
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 316 gttgtccatccagaaccagaccgccgtcttgaacg 350
>gb|DR385774.1|DR385774 RTHG1_10_F10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_10_F10_A029 5', mRNA sequence
Length = 811
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 658 gttgtccatccagaaccagaccgccgtcttgaacg 624
>gb|DR387500.1|DR387500 RTHG1_22_E09.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_22_E09_A029 3', mRNA sequence
Length = 759
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 474 gttgttcatccagaaccagagcgccgtcttgaacg 508
||||| |||||||||||||| ||||||||||||||
Sbjct: 470 gttgtccatccagaaccagaccgccgtcttgaacg 436
>gb|DR094599.1|DR094599 STRR1_15_C09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_15_C09_A033 5', mRNA sequence
Length = 766
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 981 ctggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaacttgctgca 1037
|||||| || ||||||||||||||| |||||| |||||||| || ||||||||||
Sbjct: 193 ctggcagccatcgccgcagtagtcggaggtcgtcccgcagtatccatacttgctgca 137
>gb|DR094950.1|DR094950 STRR1_17_G05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_17_G05_A033 5', mRNA sequence
Length = 873
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 981 ctggcacccgtcgccgcagtagtcgtcggtcgtgccgcagtagccgaacttgctgca 1037
|||||| || ||||||||||||||| |||||| |||||||| || ||||||||||
Sbjct: 84 ctggcagccatcgccgcagtagtcggaggtcgtcccgcagtatccatacttgctgca 28
>gb|CF391842.1|CF391842 RTDR3_10_B11.b1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_B11_A022 3', mRNA
sequence
Length = 466
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 216 ttcatccagaaccagacagccgtcttgaacg 186
>gb|CF392844.1|CF392844 RTDR3_19_A02.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_A02_A022 5', mRNA
sequence
Length = 752
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 663 ttcatccagaaccagacagccgtcttgaacg 633
>gb|CF397691.1|CF397691 RTDS3_1_A01.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_A01_A022 3', mRNA sequence
Length = 441
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 65 ttcatccagaaccagacagccgtcttgaacg 35
>gb|CF398352.1|CF398352 RTDS3_12_F06.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_12_F06_A022 3', mRNA sequence
Length = 542
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 259 ttcatccagaaccagacagccgtcttgaacg 229
>gb|CF470438.1|CF470438 RTDS1_17_H03.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_17_H03_A015 5', mRNA sequence
Length = 758
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 671 ttcatccagaaccagacagccgtcttgaacg 641
>gb|CF471984.1|CF471984 RTDS1_7_F08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_F08_A015 5', mRNA sequence
Length = 529
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 280 ttcatccagaaccagacagccgtcttgaacg 250
>gb|CF472390.1|CF472390 RTDS1_9_G12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_9_G12_A015 5', mRNA sequence
Length = 729
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 412 ttcatccagaaccagacagccgtcttgaacg 382
>gb|CF472839.1|CF472839 RTDS1_12_B01.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_B01_A015 3', mRNA sequence
Length = 415
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 74 ttcatccagaaccagacagccgtcttgaacg 44
>gb|CF472913.1|CF472913 RTDS1_12_B01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_12_B01_A015 5', mRNA sequence
Length = 736
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 518 ttcatccagaaccagacagccgtcttgaacg 488
>gb|CF665503.1|CF665503 RTCNT1_16_H12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_H12_A029 3', mRNA sequence
Length = 749
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 91 ttcatccagaaccagacagccgtcttgaacg 121
>gb|CF665579.1|CF665579 RTCNT1_16_H12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_H12_A029 5', mRNA sequence
Length = 721
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 316 ttcatccagaaccagacagccgtcttgaacg 346
>gb|CF665639.1|CF665639 RTCNT1_17_F09.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_17_F09_A029 3', mRNA sequence
Length = 542
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 259 ttcatccagaaccagacagccgtcttgaacg 229
>gb|CF667816.1|CF667816 RTCNT1_32_E06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_32_E06_A029 5', mRNA sequence
Length = 761
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 478 ttcatccagaaccagagcgccgtcttgaacg 508
|||||||||||||||| |||||||||||||
Sbjct: 322 ttcatccagaaccagacagccgtcttgaacg 352
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 92,535
Number of Sequences: 355925
Number of extensions: 92535
Number of successful extensions: 26485
Number of sequences better than 0.5: 224
Number of HSP's better than 0.5 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25758
Number of HSP's gapped (non-prelim): 727
length of query: 1225
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1206
effective length of database: 210,514,662
effective search space: 253880682372
effective search space used: 253880682372
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)