BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF387891.1|CF387891 RTDR1_18_F09.g1_A015 Loblolly pine r... 129 1e-028
gb|CF400481.1|CF400481 RTWW1_5_F02.g1_A015 Well-watered lob... 129 1e-028
gb|CF667142.1|CF667142 RTCNT1_28_A04.g1_A029 Root control P... 129 1e-028
gb|CF671997.1|CF671997 RTCNT1_60_D07.g1_A029 Root control P... 129 1e-028
gb|CO175804.1|CO175804 NDL1_57_D06.b1_A029 Needles control ... 129 1e-028
gb|CO367528.1|CO367528 RTK1_34_G11.g1_A029 Roots minus pota... 129 1e-028
gb|DN460695.1|DN460695 EST956494 Sequencing ESTs from loblo... 129 1e-028
gb|DN462689.1|DN462689 EST958488 Sequencing ESTs from loblo... 129 1e-028
gb|DR016208.1|DR016208 STRS1_8_C03.g1_A034 Shoot tip pitch ... 129 1e-028
gb|DR019892.1|DR019892 STRS1_33_E03.b1_A034 Shoot tip pitch... 129 1e-028
gb|DR021389.1|DR021389 STRS1_44_G08.b1_A034 Shoot tip pitch... 129 1e-028
gb|DR025028.1|DR025028 STRS1_69_D08.b1_A034 Shoot tip pitch... 129 1e-028
gb|DR093099.1|DR093099 STRR1_6_B07.b1_A033 Stem Response Re... 129 1e-028
gb|DR093169.1|DR093169 STRR1_6_B07.g1_A033 Stem Response Re... 129 1e-028
gb|DR099634.1|DR099634 STRR1_57_B02.b1_A033 Stem Response R... 129 1e-028
gb|DR099694.1|DR099694 STRR1_57_B02.g1_A033 Stem Response R... 129 1e-028
gb|DR101560.1|DR101560 STRR1_74_E03.b1_A033 Stem Response R... 129 1e-028
gb|DR101629.1|DR101629 STRR1_74_E03.g1_A033 Stem Response R... 129 1e-028
gb|DR178852.1|DR178852 RTMNUT1_14_H08.b1_A029 Roots minus m... 129 1e-028
gb|DR178936.1|DR178936 RTMNUT1_14_H08.g1_A029 Roots minus m... 129 1e-028
gb|DR180061.1|DR180061 RTMNUT1_26_E12.b1_A029 Roots minus m... 129 1e-028
gb|DR180143.1|DR180143 RTMNUT1_26_E12.g1_A029 Roots minus m... 129 1e-028
gb|BX248907.1|BX248907 BX248907 Pinus pinaster differenciat... 121 4e-026
gb|CF386306.1|CF386306 RTDR1_13_D11.g1_A015 Loblolly pine r... 121 4e-026
gb|CF400139.1|CF400139 RTWW1_3_H05.g1_A015 Well-watered lob... 121 4e-026
gb|CF400303.1|CF400303 RTWW1_4_E12.g1_A015 Well-watered lob... 121 4e-026
gb|CF400876.1|CF400876 RTWW1_8_B05.g1_A015 Well-watered lob... 121 4e-026
gb|CF474118.1|CF474118 RTWW2_18_F04.g1_A021 Well-watered lo... 121 4e-026
gb|CF663680.1|CF663680 RTCNT1_4_B03.g1_A029 Root control Pi... 121 4e-026
gb|BX675171.1|BX675171 BX675171 RN Pinus pinaster cDNA clon... 121 4e-026
gb|BX681480.1|BX681480 BX681480 RS Pinus pinaster cDNA clon... 121 4e-026
gb|CO174224.1|CO174224 NDL1_42_D01.g1_A029 Needles control ... 121 4e-026
gb|CO411231.1|CO411231 EST841616 Sequencing ESTs from loblo... 121 4e-026
gb|CO413491.1|CO413491 EST843876 Sequencing ESTs from loblo... 121 4e-026
gb|CV135118.1|CV135118 EST846327 Sequencing ESTs from loblo... 121 4e-026
gb|CV137973.1|CV137973 EST849182 Sequencing ESTs from loblo... 121 4e-026
gb|CV138881.1|CV138881 EST850090 Sequencing ESTs from loblo... 121 4e-026
gb|CX650205.1|CX650205 COLD1_44_D12.b1_A029 Root cold Pinus... 121 4e-026
gb|DN446958.1|DN446958 EST942757 Sequencing ESTs from loblo... 121 4e-026
gb|DN447788.1|DN447788 EST943587 Sequencing ESTs from loblo... 121 4e-026
gb|DN462207.1|DN462207 EST958006 Sequencing ESTs from loblo... 121 4e-026
gb|DR025491.1|DR025491 STRS1_71_H12.g1_A034 Shoot tip pitch... 121 4e-026
gb|DR096503.1|DR096503 STRR1_28_H08.b1_A033 Stem Response R... 121 4e-026
gb|DR112603.1|DR112603 RTS1_29_G02.b1_A029 Roots minus sulf... 121 4e-026
gb|DR112678.1|DR112678 RTS1_29_G02.g1_A029 Roots minus sulf... 121 4e-026
gb|DR181297.1|DR181297 RTMNUT1_38_B07.b2_A029 Roots minus m... 121 4e-026
gb|CV145594.1|CV145594 EST856803 Sequencing ESTs from loblo... 119 1e-025
gb|DN451081.1|DN451081 EST946880 Sequencing ESTs from loblo... 119 1e-025
gb|DN455453.1|DN455453 EST951252 Sequencing ESTs from loblo... 119 1e-025
gb|DN457081.1|DN457081 EST952880 Sequencing ESTs from loblo... 119 1e-025
gb|DN462754.1|DN462754 EST958553 Sequencing ESTs from loblo... 119 1e-025
gb|DR071133.1|DR071133 RTDK1_17_G08.g1_A029 Roots, dark Pin... 119 1e-025
gb|DR080326.1|DR080326 RTFEPL1_21_H11.g1_A029 Roots plus ad... 119 1e-025
gb|CF474719.1|CF474719 RTWW2_7_H10.g1_A021 Well-watered lob... 113 9e-024
gb|CF672186.1|CF672186 RTCNT1_62_A03.b1_A029 Root control P... 113 9e-024
gb|DN457605.1|DN457605 EST953404 Sequencing ESTs from loblo... 113 9e-024
gb|DT624423.1|DT624423 EST1158698 Sequencing ESTs from lobl... 113 9e-024
gb|CF671375.1|CF671375 RTCNT1_56_D12.g1_A029 Root control P... 111 4e-023
gb|CN783902.1|CN783902 EST782593 Sequencing ESTs from loblo... 111 4e-023
gb|CN784034.1|CN784034 EST782725 Sequencing ESTs from loblo... 111 4e-023
gb|CN785978.1|CN785978 EST784669 Sequencing ESTs from loblo... 111 4e-023
gb|CO201181.1|CO201181 RTCNT2_4_D06.b1_A029 Root control 2 ... 111 4e-023
gb|CO410745.1|CO410745 EST841130 Sequencing ESTs from loblo... 111 4e-023
gb|CO411901.1|CO411901 EST842286 Sequencing ESTs from loblo... 111 4e-023
gb|CO412528.1|CO412528 EST842913 Sequencing ESTs from loblo... 111 4e-023
gb|CO361282.1|CO361282 NDL2_3_H08.g1_A029 Needles control 2... 111 4e-023
gb|CV133908.1|CV133908 EST845117 Sequencing ESTs from loblo... 111 4e-023
gb|CV134043.1|CV134043 EST845252 Sequencing ESTs from loblo... 111 4e-023
gb|CV135319.1|CV135319 EST846528 Sequencing ESTs from loblo... 111 4e-023
gb|CV136622.1|CV136622 EST847831 Sequencing ESTs from loblo... 111 4e-023
gb|CV136664.1|CV136664 EST847873 Sequencing ESTs from loblo... 111 4e-023
gb|CV136875.1|CV136875 EST848084 Sequencing ESTs from loblo... 111 4e-023
gb|CV137349.1|CV137349 EST848558 Sequencing ESTs from loblo... 111 4e-023
gb|CV137492.1|CV137492 EST848701 Sequencing ESTs from loblo... 111 4e-023
gb|CV137856.1|CV137856 EST849065 Sequencing ESTs from loblo... 111 4e-023
gb|CV138026.1|CV138026 EST849235 Sequencing ESTs from loblo... 111 4e-023
gb|CV138543.1|CV138543 EST849752 Sequencing ESTs from loblo... 111 4e-023
gb|CV139095.1|CV139095 EST850304 Sequencing ESTs from loblo... 111 4e-023
gb|CV139126.1|CV139126 EST850335 Sequencing ESTs from loblo... 111 4e-023
gb|CV143521.1|CV143521 EST854730 Sequencing ESTs from loblo... 111 4e-023
gb|CV143875.1|CV143875 EST855084 Sequencing ESTs from loblo... 111 4e-023
gb|CV145549.1|CV145549 EST856758 Sequencing ESTs from loblo... 111 4e-023
gb|CV146001.1|CV146001 EST857210 Sequencing ESTs from loblo... 111 4e-023
gb|CV146320.1|CV146320 EST857529 Sequencing ESTs from loblo... 111 4e-023
gb|CV147265.1|CV147265 EST858474 Sequencing ESTs from loblo... 111 4e-023
gb|CV147500.1|CV147500 EST858709 Sequencing ESTs from loblo... 111 4e-023
gb|CV147701.1|CV147701 EST858910 Sequencing ESTs from loblo... 111 4e-023
gb|CX651365.1|CX651365 COLD1_51_H03.g1_A029 Root cold Pinus... 111 4e-023
gb|DN445694.1|DN445694 EST941493 Sequencing ESTs from loblo... 111 4e-023
gb|DN446023.1|DN446023 EST941822 Sequencing ESTs from loblo... 111 4e-023
gb|DN447483.1|DN447483 EST943282 Sequencing ESTs from loblo... 111 4e-023
gb|DN449505.1|DN449505 EST945304 Sequencing ESTs from loblo... 111 4e-023
gb|DN453114.1|DN453114 EST948913 Sequencing ESTs from loblo... 111 4e-023
gb|DN453639.1|DN453639 EST949438 Sequencing ESTs from loblo... 111 4e-023
gb|DN454312.1|DN454312 EST950111 Sequencing ESTs from loblo... 111 4e-023
gb|DN456589.1|DN456589 EST952388 Sequencing ESTs from loblo... 111 4e-023
gb|DN457898.1|DN457898 EST953697 Sequencing ESTs from loblo... 111 4e-023
gb|DN457901.1|DN457901 EST953700 Sequencing ESTs from loblo... 111 4e-023
gb|DN457925.1|DN457925 EST953724 Sequencing ESTs from loblo... 111 4e-023
gb|DN458115.1|DN458115 EST953914 Sequencing ESTs from loblo... 111 4e-023
gb|DN459101.1|DN459101 EST954900 Sequencing ESTs from loblo... 111 4e-023
gb|DN459549.1|DN459549 EST955348 Sequencing ESTs from loblo... 111 4e-023
gb|DN463808.1|DN463808 EST959607 Sequencing ESTs from loblo... 111 4e-023
gb|DN464277.1|DN464277 EST960076 Sequencing ESTs from loblo... 111 4e-023
gb|DN465502.1|DN465502 EST961301 Sequencing ESTs from loblo... 111 4e-023
gb|DN465684.1|DN465684 EST961483 Sequencing ESTs from loblo... 111 4e-023
gb|DR070033.1|DR070033 RTDK1_10_H02.g1_A029 Roots, dark Pin... 111 4e-023
gb|DR110394.1|DR110394 RTS1_10_D05.g1_A029 Roots minus sulf... 111 4e-023
gb|DT625015.1|DT625015 EST1159290 Sequencing ESTs from lobl... 111 4e-023
gb|DT627235.1|DT627235 EST1160311 Sequencing ESTs from lobl... 111 4e-023
gb|CX652139.1|CX652139 COLD1_57_E03.b1_A029 Root cold Pinus... 107 5e-022
gb|DR110306.1|DR110306 RTS1_10_D05.b1_A029 Roots minus sulf... 107 5e-022
gb|CV147649.1|CV147649 EST858858 Sequencing ESTs from loblo... 105 2e-021
gb|DN447430.1|DN447430 EST943229 Sequencing ESTs from loblo... 105 2e-021
gb|DR023572.1|DR023572 STRS1_58_C10.g1_A034 Shoot tip pitch... 105 2e-021
gb|DN455563.1|DN455563 EST951362 Sequencing ESTs from loblo... 103 9e-021
gb|DR014631.1|DR014631 HEAT1_50_D11.g1_A029 Root at 37 C fo... 103 9e-021
gb|DR178582.1|DR178582 RTMNUT1_12_D12.g1_A029 Roots minus m... 103 9e-021
gb|CX649536.1|CX649536 COLD1_35_H06.g1_A029 Root cold Pinus... 101 3e-020
gb|DR016154.1|DR016154 STRS1_8_C03.b1_A034 Shoot tip pitch ... 101 3e-020
gb|DR117892.1|DR117892 RTMG1_9_H02.g1_A029 Roots minus magn... 101 3e-020
gb|DR385811.1|DR385811 RTHG1_11_B07.b1_A029 Roots plus adde... 101 3e-020
gb|BX681413.1|BX681413 BX681413 RS Pinus pinaster cDNA clon... 100 1e-019
gb|BE520104.1|BE520104 NXCI_016_H05_F NXCI (Nsf Xylem Compr... 98 5e-019
gb|BE657088.1|BE657088 NXCI_042_D11_F NXCI (Nsf Xylem Compr... 98 5e-019
gb|BG275381.1|BG275381 NXSI_141_C02_F NXSI (Nsf Xylem Side ... 98 5e-019
gb|BX679239.1|BX679239 BX679239 RS Pinus pinaster cDNA clon... 98 5e-019
gb|BX682186.1|BX682186 BX682186 RS Pinus pinaster cDNA clon... 98 5e-019
gb|CR392122.1|CR392122 CR392122 RN Pinus pinaster cDNA clon... 98 5e-019
gb|CX713747.1|CX713747 RTPQ1_12_D08.g1_A032 Roots treated w... 98 5e-019
gb|DR048524.1|DR048524 RTBOR1_9_A12.g1_A029 Roots plus adde... 98 5e-019
gb|DR162217.1|DR162217 RTFE1_16_A12.g1_A029 Roots minus iro... 98 5e-019
gb|DR181373.1|DR181373 RTMNUT1_38_B07.g2_A029 Roots minus m... 98 5e-019
gb|CX650283.1|CX650283 COLD1_44_D12.g1_A029 Root cold Pinus... 96 2e-018
gb|CF663603.1|CF663603 RTCNT1_4_B03.b1_A029 Root control Pi... 94 8e-018
gb|DR387173.1|DR387173 RTHG1_20_A05.b1_A029 Roots plus adde... 94 8e-018
gb|AA557044.1|AA557044 886 Loblolly pine N Pinus taeda cDNA... 92 3e-017
gb|DR071054.1|DR071054 RTDK1_17_G08.b1_A029 Roots, dark Pin... 92 3e-017
gb|DR080253.1|DR080253 RTFEPL1_21_H11.b1_A029 Roots plus ad... 92 3e-017
gb|BQ696001.1|BQ696001 NXPV_035_C07_F NXPV (Nsf Xylem Plani... 90 1e-016
gb|BQ696456.1|BQ696456 NXPV_041_E05_F NXPV (Nsf Xylem Plani... 90 1e-016
gb|AW758720.1|AW758720 NXNV_086_F01_F Nsf Xylem Normal wood... 86 2e-015
gb|CO175869.1|CO175869 NDL1_57_D06.g1_A029 Needles control ... 86 2e-015
gb|DR052858.1|DR052858 RTCA1_7_G12.b1_A029 Roots minus calc... 84 8e-015
gb|DR069946.1|DR069946 RTDK1_10_H02.b1_A029 Roots, dark Pin... 84 8e-015
gb|DR096588.1|DR096588 STRR1_28_H08.g1_A033 Stem Response R... 84 8e-015
gb|CO369727.1|CO369727 RTK1_53_D06.b1_A029 Roots minus pota... 82 3e-014
gb|CV133935.1|CV133935 EST845144 Sequencing ESTs from loblo... 80 1e-013
gb|CF386208.1|CF386208 RTDR1_13_D11.b1_A015 Loblolly pine r... 78 5e-013
gb|AW064650.1|AW064650 ST34A10 Pine TriplEx shoot tip libra... 76 2e-012
gb|CF398458.1|CF398458 RTDS3_12_G11.g1_A022 Drought-stresse... 76 2e-012
gb|CO361199.1|CO361199 NDL2_3_H08.b1_A029 Needles control 2... 76 2e-012
gb|CV137246.1|CV137246 EST848455 Sequencing ESTs from loblo... 76 2e-012
gb|CX649456.1|CX649456 COLD1_35_H06.b1_A029 Root cold Pinus... 76 2e-012
gb|DR049321.1|DR049321 RTBOR1_15_A11.g1_A029 Roots plus add... 76 2e-012
gb|CF387817.1|CF387817 RTDR1_18_F09.b1_A015 Loblolly pine r... 74 8e-012
gb|DR061161.1|DR061161 RTNIT1_32_A11.g1_A029 Roots minus ni... 74 8e-012
gb|CD017575.1|CD017575 NXCI_128_D09_F NXCI (Nsf Xylem Compr... 72 3e-011
gb|CF400223.1|CF400223 RTWW1_4_E12.b1_A015 Well-watered lob... 70 1e-010
gb|BE656885.1|BE656885 NXCI_057_F08_F NXCI (Nsf Xylem Compr... 68 5e-010
gb|CF666500.1|CF666500 RTCNT1_23_F05.g1_A029 Root control P... 68 5e-010
gb|DR178495.1|DR178495 RTMNUT1_12_D12.b1_A029 Roots minus m... 68 5e-010
gb|BX253888.1|BX253888 BX253888 Pinus pinaster differenciat... 66 2e-009
gb|DN459276.1|DN459276 EST955075 Sequencing ESTs from loblo... 66 2e-009
gb|DR023500.1|DR023500 STRS1_58_C10.b1_A034 Shoot tip pitch... 66 2e-009
gb|DR162134.1|DR162134 RTFE1_16_A12.b1_A029 Roots minus iro... 66 2e-009
gb|CF391331.1|CF391331 RTDR3_1_H09.b1_A022 Loblolly pine ro... 64 7e-009
gb|DR059696.1|DR059696 RTNIT1_19_E08.b1_A029 Roots minus ni... 64 7e-009
gb|AA739675.1|AA739675 440 PtIFG2 Pinus taeda cDNA clone 87... 62 3e-008
gb|BX249407.1|BX249407 BX249407 Pinus pinaster differenciat... 62 3e-008
gb|CF400367.1|CF400367 RTWW1_5_F02.b1_A015 Well-watered lob... 62 3e-008
gb|CF666433.1|CF666433 RTCNT1_23_F05.b1_A029 Root control P... 62 3e-008
gb|CF667058.1|CF667058 RTCNT1_28_A04.b1_A029 Root control P... 62 3e-008
gb|CF671917.1|CF671917 RTCNT1_60_D07.b1_A029 Root control P... 62 3e-008
gb|BX676871.1|BX676871 BX676871 RN Pinus pinaster cDNA clon... 62 3e-008
gb|DR014549.1|DR014549 HEAT1_50_D11.b1_A029 Root at 37 C fo... 62 3e-008
gb|DR025107.1|DR025107 STRS1_69_D08.g1_A034 Shoot tip pitch... 62 3e-008
gb|DR744533.1|DR744533 RTCU1_23_D03.b1_A029 Roots plus adde... 62 3e-008
gb|DR116803.1|DR116803 RTMG1_2_H05.g1_A029 Roots minus magn... 60 1e-007
gb|CF473974.1|CF473974 RTWW2_18_F04.b1_A021 Well-watered lo... 58 5e-007
gb|CF478805.1|CF478805 RTWW3_15_C03.b1_A022 Well-watered lo... 56 2e-006
gb|DR109792.1|DR109792 RTS1_4_H06.g1_A029 Roots minus sulfu... 56 2e-006
gb|DR741994.1|DR741994 RTCU1_1_B12.b1_A029 Roots plus added... 56 2e-006
gb|BE451888.1|BE451888 NXCI_004_G08_F NXCI (Nsf Xylem Compr... 54 7e-006
gb|BE758647.1|BE758647 NXCI_069_E11_F NXCI (Nsf Xylem Compr... 54 7e-006
gb|DN462101.1|DN462101 EST957900 Sequencing ESTs from loblo... 54 7e-006
gb|BF517754.1|BF517754 NXSI_029_H01_F NXSI (Nsf Xylem Side ... 52 3e-005
gb|BG319400.1|BG319400 NXPV_027_E04_F NXPV (Nsf Xylem Plani... 52 3e-005
gb|CF671304.1|CF671304 RTCNT1_56_D12.b1_A029 Root control P... 52 3e-005
gb|DR079957.1|DR079957 RTFEPL1_19_B06.b1_A029 Roots plus ad... 48 4e-004
gb|CD016032.1|CD016032 NXCI_005_A03_F NXCI (Nsf Xylem Compr... 44 0.007
gb|CV134305.1|CV134305 EST845514 Sequencing ESTs from loblo... 42 0.027
gb|CD015997.1|CD015997 NXCI_006_B06_F NXCI (Nsf Xylem Compr... 38 0.42
>gb|CF387891.1|CF387891 RTDR1_18_F09.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_18_F09_A015 5', mRNA
sequence
Length = 790
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 531 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 472
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 471 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 412
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 411 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 352
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 351 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 292
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 291 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 232
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 231 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 172
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 171 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 115
>gb|CF400481.1|CF400481 RTWW1_5_F02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_F02_A015 5', mRNA sequence
Length = 717
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 473 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 414
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 413 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 354
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 353 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 294
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 293 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 234
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 233 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 174
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 173 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 114
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 113 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 57
>gb|CF667142.1|CF667142 RTCNT1_28_A04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_A04_A029 5', mRNA sequence
Length = 792
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 504 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 445
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 444 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 385
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 384 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 325
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 324 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 265
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 264 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 205
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| ||||| || || || |||||
Sbjct: 204 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcggtttcttttgcaatgtc 145
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 144 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 88
>gb|CF671997.1|CF671997 RTCNT1_60_D07.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_D07_A029 5', mRNA sequence
Length = 754
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 486 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 427
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 426 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 367
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 366 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 307
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 306 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 247
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 246 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 187
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 186 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 127
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 126 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 70
>gb|CO175804.1|CO175804 NDL1_57_D06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_57_D06_A029 3', mRNA sequence
Length = 796
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 215 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 274
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 275 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 334
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 335 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 394
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 395 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 454
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 455 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 514
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 515 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 574
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 575 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 631
>gb|CO367528.1|CO367528 RTK1_34_G11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_34_G11_A029 5', mRNA sequence
Length = 825
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 576 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 517
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 516 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 457
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 456 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 397
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 396 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 337
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 336 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 277
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 276 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 217
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 216 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 160
>gb|DN460695.1|DN460695 EST956494 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII149 5' end, mRNA sequence
Length = 733
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 503 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 444
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 443 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 384
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 383 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 324
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 323 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 264
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 263 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 204
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 203 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 144
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 143 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 87
>gb|DN462689.1|DN462689 EST958488 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIP51 5' end, mRNA sequence
Length = 596
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|DR016208.1|DR016208 STRS1_8_C03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_8_C03_A034 5', mRNA sequence
Length = 858
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 522 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 463
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 462 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 403
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 402 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 343
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 342 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 283
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 282 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 223
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 222 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 163
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 162 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 106
>gb|DR019892.1|DR019892 STRS1_33_E03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_33_E03_A034 3', mRNA sequence
Length = 899
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 530 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 471
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 470 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 411
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 410 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 351
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 350 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 291
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 290 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 231
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 230 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 171
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 170 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 114
>gb|DR021389.1|DR021389 STRS1_44_G08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_44_G08_A034 3', mRNA sequence
Length = 829
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 391 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 450
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 451 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 510
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 511 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 570
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 571 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 630
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 631 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 690
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 691 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 750
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 751 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 807
>gb|DR025028.1|DR025028 STRS1_69_D08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_69_D08_A034 3', mRNA sequence
Length = 828
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 243 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 302
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 303 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 362
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 363 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 422
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 423 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 482
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 483 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 542
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 543 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 602
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 603 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 659
>gb|DR093099.1|DR093099 STRR1_6_B07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_B07_A033 3', mRNA sequence
Length = 895
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 361 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 420
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 421 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 480
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| ||||| ||| ||
Sbjct: 481 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcgtctagggcaat 540
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 541 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 600
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 601 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 660
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 661 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 720
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 721 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 777
>gb|DR093169.1|DR093169 STRR1_6_B07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_6_B07_A033 5', mRNA sequence
Length = 834
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 332 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 391
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 392 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 451
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| ||||| ||| ||
Sbjct: 452 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcgtctagggcaat 511
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 512 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 571
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 572 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 631
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 632 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 691
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 692 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 748
>gb|DR099634.1|DR099634 STRR1_57_B02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_B02_A033 3', mRNA sequence
Length = 815
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 505 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 446
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 445 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 386
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 385 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 326
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 325 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 266
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 265 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 206
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 205 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 146
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 145 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 89
>gb|DR099694.1|DR099694 STRR1_57_B02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_57_B02_A033 5', mRNA sequence
Length = 718
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 559 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 500
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 499 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 440
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 439 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 380
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 379 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 320
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 319 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 260
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 259 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 200
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 199 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 143
>gb|DR101560.1|DR101560 STRR1_74_E03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_E03_A033 3', mRNA sequence
Length = 788
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 476 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 417
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 416 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 357
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| ||||| ||| ||
Sbjct: 356 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcgtctagggcaat 297
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 296 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 237
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 236 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 177
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 176 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 117
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 116 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 60
>gb|DR101629.1|DR101629 STRR1_74_E03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_E03_A033 5', mRNA sequence
Length = 579
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 524 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 465
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 464 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 405
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| ||||| ||| ||
Sbjct: 404 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcgtctagggcaat 345
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 344 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 285
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 284 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 225
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 224 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 165
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 164 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 108
>gb|DR178852.1|DR178852 RTMNUT1_14_H08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_14_H08_A029 3', mRNA sequence
Length = 772
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 470 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 411
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 410 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 351
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 350 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 291
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 290 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 231
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 230 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 171
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 170 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 111
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 110 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 54
>gb|DR178936.1|DR178936 RTMNUT1_14_H08.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_14_H08_A029 5', mRNA sequence
Length = 743
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 586 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 527
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 526 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 467
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 466 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 407
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 406 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 347
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 346 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 287
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 286 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 227
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 226 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 170
>gb|DR180061.1|DR180061 RTMNUT1_26_E12.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_26_E12_A029 3', mRNA sequence
Length = 887
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 577 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 518
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 517 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 458
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 457 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 398
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 397 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 338
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 337 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 278
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 277 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 218
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 217 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 161
>gb|DR180143.1|DR180143 RTMNUT1_26_E12.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_26_E12_A029 5', mRNA sequence
Length = 776
Score = 129 bits (65), Expect = 1e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 579 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 520
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 519 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 460
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 459 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 400
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 399 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 340
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 339 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 280
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 279 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 220
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 219 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 163
>gb|BX248907.1|BX248907 BX248907 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP002E09, mRNA sequence
Length = 696
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 545 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 486
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 485 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 426
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 425 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 366
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 365 atttccattgtgcttgatgttcttcgttttcttcctatctctctcgggctccttcagcgc 306
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 305 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 246
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 245 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 186
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 185 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 129
>gb|CF386306.1|CF386306 RTDR1_13_D11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_13_D11_A015 5', mRNA
sequence
Length = 805
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 571 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 512
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 511 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 452
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 451 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 392
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 391 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 332
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 331 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 272
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 271 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 212
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 211 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 155
>gb|CF400139.1|CF400139 RTWW1_3_H05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_3_H05_A015 5', mRNA sequence
Length = 727
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 570 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 511
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 510 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 451
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| | ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 450 cttcgccatggacctcgggctcataaccttagcgatctcaatgacatcatctagggcgat 391
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 390 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 331
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 330 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 271
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 270 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 211
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 210 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 154
>gb|CF400303.1|CF400303 RTWW1_4_E12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_E12_A015 5', mRNA sequence
Length = 806
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 538 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 479
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 478 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 419
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 418 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 359
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 358 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 299
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 298 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 239
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 238 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 179
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 178 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 122
>gb|CF400876.1|CF400876 RTWW1_8_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_8_B05_A015 5', mRNA sequence
Length = 663
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 565 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 506
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 505 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 446
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 445 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 386
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 385 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 326
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 325 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 266
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 265 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 206
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 205 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 149
>gb|CF474118.1|CF474118 RTWW2_18_F04.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_18_F04_A021 5', mRNA sequence
Length = 749
Score = 121 bits (61), Expect = 4e-026
Identities = 325/413 (78%)
Strand = Plus / Minus
Query: 192 atctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcgacg 251
||||||||||| || || |||||||| ||| | |||||||| ||||| ||||| ||
Sbjct: 549 atctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatccact 490
Query: 252 gtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactccttg 311
||||| |||||| || ||| || ||||| |||||||| || | |||||||| |||||
Sbjct: 489 gtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattccttc 430
Query: 312 gccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatgttg 371
||||| ||||| || ||| ||| |||||||| ||||| || || ||| ||| ||
Sbjct: 429 gccatagacctcggcctcataaccttagcgatctcaatgacatcatctagggcgatattt 370
Query: 372 ccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgccttg 431
|| |||||||||||||||| ||||||||| || |||||||| ||||| ||||| ||
Sbjct: 369 ccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgctttt 310
Query: 432 atgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacggtg 491
||||| || || || || || || || | |||||||||||||| |||||| ||||||
Sbjct: 309 atgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaacggtg 250
Query: 492 agcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcctcg 551
||||| || ||||| | | |||||||||||||| || || ||||| || ||||| ||
Sbjct: 249 agctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtcttct 190
Query: 552 ccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|||||||||||||| || ||||| || || ||||||||||||||||| |||||
Sbjct: 189 ccgatcttcttcggcgatagacccagaggaccgatcttgggggccagagacga 137
>gb|CF663680.1|CF663680 RTCNT1_4_B03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_B03_A029 5', mRNA sequence
Length = 614
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 542 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 483
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 482 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 423
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 422 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 363
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 362 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 303
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 302 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 243
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 242 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 183
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 182 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 126
>gb|BX675171.1|BX675171 BX675171 RN Pinus pinaster cDNA clone RN10D08, mRNA sequence
Length = 524
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 515 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 456
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 455 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 396
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 395 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 336
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 335 atttccattgtgcttgatgttcttcgttttcttcctatctctctcgggctccttcagcgc 276
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 275 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 216
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 215 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 156
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 155 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 99
>gb|BX681480.1|BX681480 BX681480 RS Pinus pinaster cDNA clone RS60B06, mRNA sequence
Length = 568
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 515 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 456
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 455 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 396
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 395 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 336
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| |||||||| || |||||||| ||||| |||||
Sbjct: 335 atttccattgtgcttgatgttcttcgttttcttcctatctctctcgggctccttcagcgc 276
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 275 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 216
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 215 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 156
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 155 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 99
>gb|CO174224.1|CO174224 NDL1_42_D01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_42_D01_A029 5', mRNA sequence
Length = 777
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 507 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 448
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 447 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 388
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 387 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 328
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 327 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 268
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 267 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 208
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 207 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 148
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 147 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 91
>gb|CO411231.1|CO411231 EST841616 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALH50 5' end, mRNA sequence
Length = 826
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || || || || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcttttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|CO413491.1|CO413491 EST843876 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMB62 5' end, mRNA sequence
Length = 904
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || || || || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcttttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|CV135118.1|CV135118 EST846327 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PICCJ78 5' end, mRNA sequence
Length = 791
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 421 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 362
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 361 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 302
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 301 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 242
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 241 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 182
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 181 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 122
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 121 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 62
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 61 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 5
>gb|CV137973.1|CV137973 EST849182 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAX09 5' end, mRNA sequence
Length = 851
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 577 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 518
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 517 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 458
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 457 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 398
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 397 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 338
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 337 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 278
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 277 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 218
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 217 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 161
>gb|CV138881.1|CV138881 EST850090 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB839 5' end, mRNA sequence
Length = 887
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|CX650205.1|CX650205 COLD1_44_D12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_D12_A029 3', mRNA sequence
Length = 788
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 422 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 363
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 362 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 303
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 302 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 243
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 242 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 183
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 182 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 123
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 122 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 63
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 62 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 6
>gb|DN446958.1|DN446958 EST942757 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBN56 5' end, mRNA sequence
Length = 895
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || || || || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcttttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|DN447788.1|DN447788 EST943587 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBX28 5' end, mRNA sequence
Length = 956
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 591 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 532
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 531 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 472
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 471 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 412
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 411 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 352
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 351 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 292
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || || || || |||||
Sbjct: 291 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcttttgcaatgtc 232
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 231 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|DN462207.1|DN462207 EST958006 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIJ60 5' end, mRNA sequence
Length = 737
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 577 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 518
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 517 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 458
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 457 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 398
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 397 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 338
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 337 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 278
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 277 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 218
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 217 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 161
>gb|DR025491.1|DR025491 STRS1_71_H12.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_71_H12_A034 5', mRNA sequence
Length = 762
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 513 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 454
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 453 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 394
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| ||
Sbjct: 393 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcaat 334
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 333 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 274
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 273 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 214
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 213 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 154
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 153 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 97
>gb|DR096503.1|DR096503 STRR1_28_H08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_H08_A033 3', mRNA sequence
Length = 793
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 202 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 261
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 262 caccgtgcagccgacggagaggcatgtacccagaatctccttcactgatccggccaattc 321
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 322 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 381
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 382 atttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgc 441
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 442 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 501
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 502 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 561
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || | ||||| || || ||||||||||||||||| |||||
Sbjct: 562 ttctccgatcttcttgggcaatagacccagaggaccgatcttgggggccagagacga 618
>gb|DR112603.1|DR112603 RTS1_29_G02.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_29_G02_A029 3', mRNA sequence
Length = 789
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 203 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 262
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 263 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 322
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 323 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 382
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 383 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 442
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 443 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 502
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 503 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 562
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 563 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 619
>gb|DR112678.1|DR112678 RTS1_29_G02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_29_G02_A029 5', mRNA sequence
Length = 721
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Plus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 252 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 311
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 312 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 371
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 372 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 431
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 432 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 491
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 492 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 551
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 552 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 611
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 612 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 668
>gb|DR181297.1|DR181297 RTMNUT1_38_B07.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_B07_A029 3', mRNA sequence
Length = 734
Score = 121 bits (61), Expect = 4e-026
Identities = 328/417 (78%)
Strand = Plus / Minus
Query: 188 ggggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatc 247
||||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 465 ggggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatc 406
Query: 248 gacggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactc 307
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| ||
Sbjct: 405 caccgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattc 346
Query: 308 cttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgat 367
||| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 345 cttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgat 286
Query: 368 gttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgc 427
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 285 atttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgc 226
Query: 428 cttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcac 487
|| ||||| || || || || || || || | |||||||||||||| |||||| ||
Sbjct: 225 ttttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaac 166
Query: 488 ggtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtc 547
||||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 165 ggtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtc 106
Query: 548 ctcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 105 ttctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 49
>gb|CV145594.1|CV145594 EST856803 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDK46 5' end, mRNA sequence
Length = 767
Score = 119 bits (60), Expect = 1e-025
Identities = 327/416 (78%)
Strand = Plus / Minus
Query: 189 gggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcg 248
|||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 576 gggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatcc 517
Query: 249 acggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcc 308
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| |||
Sbjct: 516 accgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattcc 457
Query: 309 ttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatg 368
|| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 456 ttcgccatggacctcggcctcattaccttagcgatctcaatgacatcatctagggcgata 397
Query: 369 ttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcc 428
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 396 tttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgct 337
Query: 429 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacg 488
|| ||||| || || || || || || || | |||||||||||||| |||||| |||
Sbjct: 336 tttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaacg 277
Query: 489 gtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 548
|||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 276 gtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtct 217
Query: 549 tcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 216 tctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 161
>gb|DN451081.1|DN451081 EST946880 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEZ61 5' end, mRNA sequence
Length = 781
Score = 119 bits (60), Expect = 1e-025
Identities = 327/416 (78%)
Strand = Plus / Minus
Query: 189 gggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcg 248
|||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 590 gggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatcc 531
Query: 249 acggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcc 308
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| |||
Sbjct: 530 accgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattcc 471
Query: 309 ttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatg 368
|| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 470 ttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgata 411
Query: 369 ttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcc 428
|| || |||||||||||||||| ||||||||| || |||||||| ||||| |||||
Sbjct: 410 tttccattgtgcttgatgttcttcgtcttcttcctatctctctcgggctccttcagcgct 351
Query: 429 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacg 488
|| ||||| || || || || || || || | |||||||||||||| |||||| |||
Sbjct: 350 tttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaacg 291
Query: 489 gtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 548
|||||||| || ||||| | | |||||||||||||| || || || || || |||||
Sbjct: 290 gtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcttttgcaatgtct 231
Query: 549 tcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 230 tctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|DN455453.1|DN455453 EST951252 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGE41 5' end, mRNA sequence
Length = 887
Score = 119 bits (60), Expect = 1e-025
Identities = 327/416 (78%)
Strand = Plus / Minus
Query: 189 gggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcg 248
|||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 590 gggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatcc 531
Query: 249 acggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcc 308
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| |||
Sbjct: 530 accgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattcc 471
Query: 309 ttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatg 368
|| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 470 ttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgata 411
Query: 369 ttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcc 428
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 410 tttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgct 351
Query: 429 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacg 488
|| ||||| || || || || || || || | |||||||||||||| |||||| |||
Sbjct: 350 tttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaacg 291
Query: 489 gtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 548
|||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 290 gtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtct 231
Query: 549 tcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 230 tctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 175
>gb|DN457081.1|DN457081 EST952880 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGV96 5' end, mRNA sequence
Length = 838
Score = 119 bits (60), Expect = 1e-025
Identities = 327/416 (78%)
Strand = Plus / Minus
Query: 189 gggatctcgacctcaccatcatcgatctcctgctgcaagtccttggggtccttcccatcg 248
|||||||||||||| || || |||||||| ||| | |||||||| ||||| |||||
Sbjct: 542 gggatctcgacctccccttcgtcgatctcggcctggacatccttgggatcctttccatcc 483
Query: 249 acggtgcacccgacgctgacgcaggtccccaggatctccttgacggtcccggccaactcc 308
|| ||||| |||||| || ||| || ||||| |||||||| || | |||||||| |||
Sbjct: 482 accgtgcagccgacggagaggcatgtacccagaatctccttcaccgatccggccaattcc 423
Query: 309 ttggccatggacctgttccgcatggtcttggcgatctcgatgacgtcgtcgaggctgatg 368
|| ||||||||||| || ||| ||| |||||||| ||||| || || ||| |||
Sbjct: 422 ttcgccatggacctcggcctcataaccttagcgatctcaatgacatcatctagggcgata 363
Query: 369 ttgccgctgtgcttgatgttcttgaccttcttcctgtccctctcgggttccttgagcgcc 428
|| || ||||||||||||| || ||||||||| || |||||||| ||||| |||||
Sbjct: 362 tttccattgtgcttgatgtttttcgtcttcttcctatctctctcgggctccttcagcgct 303
Query: 429 ttgatgacgagcgccgcggcggaggggacgacggagaccttggcctgccggttctgcacg 488
|| ||||| || || || || || || || | |||||||||||||| |||||| |||
Sbjct: 302 tttatgaccagggcagcagcactcggcaccacagcgaccttggcctgcctgttctgaacg 243
Query: 489 gtgagcttgacggtgacgcggaggcccttccagtccttggcggtctccttggcgatgtcc 548
|||||||| || ||||| | | |||||||||||||| || || ||||| || |||||
Sbjct: 242 gtgagctttaccgtgaccctcaaacccttccagtccttcgcagtttcctttgcaatgtct 183
Query: 549 tcgccgatcttcttcggggagagaccgagcgggccgatcttgggggccagcgacga 604
|| ||||||||||| || || ||||| || || ||||||||||||||||| |||||
Sbjct: 182 tctccgatcttcttgggcgatagacccagaggaccgatcttgggggccagagacga 127
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 59,060
Number of Sequences: 355925
Number of extensions: 59060
Number of successful extensions: 15750
Number of sequences better than 0.5: 193
Number of HSP's better than 0.5 without gapping: 192
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14930
Number of HSP's gapped (non-prelim): 539
length of query: 634
length of database: 217,277,237
effective HSP length: 19
effective length of query: 615
effective length of database: 210,514,662
effective search space: 129466517130
effective search space used: 129466517130
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)