BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716236.2.1
(843 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA556240.1|AA556240 95 Loblolly pine CA Pinus taeda cDNA... 180 6e-044
gb|AI812690.1|AI812690 17H7 Pine Lambda Zap Xylem library P... 180 6e-044
gb|BX250820.1|BX250820 BX250820 Pinus pinaster differenciat... 180 6e-044
gb|BX251755.1|BX251755 BX251755 Pinus pinaster differenciat... 180 6e-044
gb|BX254052.1|BX254052 BX254052 Pinus pinaster differenciat... 180 6e-044
gb|BF609066.1|BF609066 NXSI_040_A08_F NXSI (Nsf Xylem Side ... 180 6e-044
gb|BQ633955.1|BQ633955 NXRV062_H08_F NXRV (Nsf Xylem Root w... 180 6e-044
gb|CF672315.1|CF672315 RTCNT1_62_F02.g1_A029 Root control P... 180 6e-044
gb|BX679956.1|BX679956 BX679956 RS Pinus pinaster cDNA clon... 180 6e-044
gb|CX648547.1|CX648547 COLD1_29_H01.b1_A029 Root cold Pinus... 180 6e-044
gb|CX648626.1|CX648626 COLD1_29_H01.g1_A029 Root cold Pinus... 180 6e-044
gb|CX648647.1|CX648647 COLD1_30_B04.b1_A029 Root cold Pinus... 180 6e-044
gb|CX648722.1|CX648722 COLD1_30_B04.g1_A029 Root cold Pinus... 180 6e-044
gb|CX649591.1|CX649591 COLD1_36_F02.b1_A029 Root cold Pinus... 180 6e-044
gb|DR014446.1|DR014446 HEAT1_49_C03.g1_A029 Root at 37 C fo... 180 6e-044
gb|DR015147.1|DR015147 STRS1_1_F08.g1_A034 Shoot tip pitch ... 180 6e-044
gb|DR015277.1|DR015277 STRS1_2_C01.g1_A034 Shoot tip pitch ... 180 6e-044
gb|DR015325.1|DR015325 STRS1_2_G03.g1_A034 Shoot tip pitch ... 180 6e-044
gb|DR019734.1|DR019734 STRS1_32_C04.b1_A034 Shoot tip pitch... 180 6e-044
gb|DR019807.1|DR019807 STRS1_32_C04.g1_A034 Shoot tip pitch... 180 6e-044
gb|DR110669.1|DR110669 RTS1_12_F03.b1_A029 Roots minus sulf... 180 6e-044
gb|DR110755.1|DR110755 RTS1_12_F03.g1_A029 Roots minus sulf... 180 6e-044
gb|DR181382.1|DR181382 RTMNUT1_38_C05.g2_A029 Roots minus m... 180 6e-044
gb|DR384469.1|DR384469 RTHG1_2_A10.g1_A029 Roots plus added... 180 6e-044
gb|BG040770.1|BG040770 NXSI_114_G09_F NXSI (Nsf Xylem Side ... 174 4e-042
gb|DR090603.1|DR090603 RTAL1_16_E07.b1_A029 Roots plus adde... 174 4e-042
gb|AW043194.1|AW043194 ST30D11 Pine TriplEx shoot tip libra... 172 1e-041
gb|DR119048.1|DR119048 RTMG1_20_G05.g1_A029 Roots minus mag... 172 1e-041
gb|DR384396.1|DR384396 RTHG1_2_A10.b1_A029 Roots plus added... 172 1e-041
gb|DR386687.1|DR386687 RTHG1_16_G02.g1_A029 Roots plus adde... 172 1e-041
gb|AW042590.1|AW042590 ST23F12 Pine TriplEx shoot tip libra... 167 9e-040
gb|AL751220.1|AL751220 AL751220 RS Pinus pinaster cDNA clon... 167 9e-040
gb|BQ700547.1|BQ700547 NXRV108_B05_F NXRV (Nsf Xylem Root w... 165 4e-039
gb|CX649670.1|CX649670 COLD1_36_F02.g1_A029 Root cold Pinus... 161 6e-038
gb|DR090678.1|DR090678 RTAL1_16_E07.g1_A029 Roots plus adde... 161 6e-038
gb|AA556378.1|AA556378 233 Loblolly pine C Pinus taeda cDNA... 157 9e-037
gb|DR024397.1|DR024397 STRS1_64_E05.g1_A034 Shoot tip pitch... 157 9e-037
gb|DR386406.1|DR386406 RTHG1_15_B01.b1_A029 Roots plus adde... 157 9e-037
gb|DR386604.1|DR386604 RTHG1_16_G02.b1_A029 Roots plus adde... 155 4e-036
gb|AA556376.1|AA556376 231 Loblolly pine C Pinus taeda cDNA... 153 1e-035
gb|BQ655462.1|BQ655462 NXRV094_H06_F NXRV (Nsf Xylem Root w... 149 2e-034
gb|DR181306.1|DR181306 RTMNUT1_38_C05.b2_A029 Roots minus m... 149 2e-034
gb|DR069345.1|DR069345 RTDK1_6_D10.g1_A029 Roots, dark Pinu... 147 9e-034
gb|DR386434.1|DR386434 RTHG1_15_E06.b1_A029 Roots plus adde... 147 9e-034
gb|AW290470.1|AW290470 NXNV027C08F Nsf Xylem Normal wood Ve... 143 1e-032
gb|CD027130.1|CD027130 NXNV027C08 Nsf Xylem Normal wood Ver... 143 1e-032
gb|DR015197.1|DR015197 STRS1_2_C01.b1_A034 Shoot tip pitch ... 141 5e-032
gb|DR118966.1|DR118966 RTMG1_20_G05.b1_A029 Roots minus mag... 141 5e-032
gb|BX253662.1|BX253662 BX253662 Pinus pinaster differenciat... 139 2e-031
gb|BF518248.1|BF518248 NXSI_036_G10_F NXSI (Nsf Xylem Side ... 139 2e-031
gb|CF388509.1|CF388509 RTDR2_3_E07.g1_A021 Loblolly pine ro... 139 2e-031
gb|CF390693.1|CF390693 RTDR2_20_E08.g1_A021 Loblolly pine r... 139 2e-031
gb|CF395605.1|CF395605 RTDS2_12_A09.g1_A021 Drought-stresse... 139 2e-031
gb|CF475244.1|CF475244 RTWW2_14_A08.g1_A021 Well-watered lo... 139 2e-031
gb|CF666365.1|CF666365 RTCNT1_22_F05.g1_A029 Root control P... 139 2e-031
gb|CF670785.1|CF670785 RTCNT1_52_C04.g1_A029 Root control P... 139 2e-031
gb|CO162611.1|CO162611 FLD1_36_A02.g1_A029 Root flooded Pin... 139 2e-031
gb|CO163778.1|CO163778 FLD1_43_E10.g1_A029 Root flooded Pin... 139 2e-031
gb|CO165581.1|CO165581 FLD1_55_C02.g1_A029 Root flooded Pin... 139 2e-031
gb|CO166328.1|CO166328 FLD1_61_D11.b1_A029 Root flooded Pin... 139 2e-031
gb|CO199552.1|CO199552 GEO2_2_B07.b1_A032 Root gravitropism... 139 2e-031
gb|CO199627.1|CO199627 GEO2_2_B07.g1_A032 Root gravitropism... 139 2e-031
gb|CO201761.1|CO201761 RTCNT2_8_A09.b1_A029 Root control 2 ... 139 2e-031
gb|CO201833.1|CO201833 RTCNT2_8_A09.g1_A029 Root control 2 ... 139 2e-031
gb|CO365353.1|CO365353 RTK1_25_E02.b1_A029 Roots minus pota... 139 2e-031
gb|CO369887.1|CO369887 RTK1_55_A07.b1_A029 Roots minus pota... 139 2e-031
gb|CO369944.1|CO369944 RTK1_55_A07.g1_A029 Roots minus pota... 139 2e-031
gb|CV034033.1|CV034033 RTNACL1_38_D12.b1_A029 Roots plus ad... 139 2e-031
gb|CX647527.1|CX647527 COLD1_17_H05.b1_A029 Root cold Pinus... 139 2e-031
gb|CX650413.1|CX650413 COLD1_45_B08.g1_A029 Root cold Pinus... 139 2e-031
gb|DR011471.1|DR011471 HEAT1_6_A01.b1_A029 Root at 37 C for... 139 2e-031
gb|DR017706.1|DR017706 STRS1_18_A07.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR019365.1|DR019365 STRS1_29_C05.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR019808.1|DR019808 STRS1_32_C05.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR021844.1|DR021844 STRS1_47_F09.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR023235.1|DR023235 STRS1_56_G09.b1_A034 Shoot tip pitch... 139 2e-031
gb|DR023325.1|DR023325 STRS1_56_G09.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR050995.1|DR050995 RTBOR1_27_B06.b1_A029 Roots plus add... 139 2e-031
gb|DR051075.1|DR051075 RTBOR1_27_B06.g1_A029 Roots plus add... 139 2e-031
gb|DR059910.1|DR059910 RTNIT1_20_B08.g1_A029 Roots minus ni... 139 2e-031
gb|DR095958.1|DR095958 STRR1_24_F10.g1_A033 Stem Response R... 139 2e-031
gb|DR102440.1|DR102440 STRR1_81_D04.b1_A033 Stem Response R... 139 2e-031
gb|DR102508.1|DR102508 STRR1_81_D04.g1_A033 Stem Response R... 139 2e-031
gb|DR109447.1|DR109447 RTS1_2_C04.b1_A029 Roots minus sulfu... 139 2e-031
gb|DR110127.1|DR110127 RTS1_9_B11.b1_A029 Roots minus sulfu... 139 2e-031
gb|DR110203.1|DR110203 RTS1_9_B11.g1_A029 Roots minus sulfu... 139 2e-031
gb|DR111506.1|DR111506 RTS1_18_F09.b1_A029 Roots minus sulf... 139 2e-031
gb|DR118119.1|DR118119 RTMG1_11_F07.b1_A029 Roots minus mag... 139 2e-031
gb|DR160783.1|DR160783 RTFE1_8_B10.b1_A029 Roots minus iron... 139 2e-031
gb|DR160871.1|DR160871 RTFE1_8_B10.g1_A029 Roots minus iron... 139 2e-031
gb|DR161344.1|DR161344 RTFE1_11_F07.b1_A029 Roots minus iro... 139 2e-031
gb|DR161433.1|DR161433 RTFE1_11_F07.g1_A029 Roots minus iro... 139 2e-031
gb|DR178994.1|DR178994 RTMNUT1_15_G07.b1_A029 Roots minus m... 139 2e-031
gb|DR181292.1|DR181292 RTMNUT1_38_A12.b2_A029 Roots minus m... 139 2e-031
gb|DR182293.1|DR182293 RTMNUT1_44_C08.b1_A029 Roots minus m... 139 2e-031
gb|DR182368.1|DR182368 RTMNUT1_44_C08.g1_A029 Roots minus m... 139 2e-031
gb|DR384638.1|DR384638 RTHG1_3_C07.g1_A029 Roots plus added... 139 2e-031
gb|DR742416.1|DR742416 RTCU1_3_H03.g2_A029 Roots plus added... 139 2e-031
gb|BM428305.1|BM428305 NXRV_012_B07_F NXRV (Nsf Xylem Root ... 137 8e-031
gb|BQ702550.1|BQ702550 NXSI_129_H05_F NXSI (Nsf Xylem Side ... 135 3e-030
gb|BQ702464.1|BQ702464 NXSI_128_H11_F NXSI (Nsf Xylem Side ... 133 1e-029
gb|CF667066.1|CF667066 RTCNT1_28_A12.b1_A029 Root control P... 133 1e-029
gb|DR078008.1|DR078008 RTFEPL1_1_H01.b1_A029 Roots plus add... 133 1e-029
gb|DR078091.1|DR078091 RTFEPL1_1_H01.g1_A029 Roots plus add... 133 1e-029
gb|CO166140.1|CO166140 FLD1_59_D07.g1_A029 Root flooded Pin... 131 5e-029
gb|CO166335.1|CO166335 FLD1_61_E11.b1_A029 Root flooded Pin... 131 5e-029
gb|DR017214.1|DR017214 STRS1_14_F11.g1_A034 Shoot tip pitch... 131 5e-029
gb|DR386513.1|DR386513 RTHG1_15_E06.g1_A029 Roots plus adde... 131 5e-029
gb|CX651238.1|CX651238 COLD1_51_C06.b1_A029 Root cold Pinus... 127 8e-028
gb|CX652683.1|CX652683 COLD1_60_G01.g1_A029 Root cold Pinus... 127 8e-028
gb|DR058576.1|DR058576 RTNIT1_12_D11.g1_A029 Roots minus ni... 127 8e-028
gb|DR060824.1|DR060824 RTNIT1_30_F01.b1_A029 Roots minus ni... 127 8e-028
gb|DR060902.1|DR060902 RTNIT1_30_F01.g1_A029 Roots minus ni... 127 8e-028
gb|CF388456.1|CF388456 RTDR2_3_E07.b1_A021 Loblolly pine ro... 125 3e-027
gb|CF390551.1|CF390551 RTDR2_20_E08.b1_A021 Loblolly pine r... 125 3e-027
gb|DR078092.1|DR078092 RTFEPL1_1_H02.g1_A029 Roots plus add... 125 3e-027
gb|DR388079.1|DR388079 RTHG1_26_B07.b1_A029 Roots plus adde... 125 3e-027
gb|CF666372.1|CF666372 RTCNT1_22_G04.g1_A029 Root control P... 123 1e-026
gb|CR393824.1|CR393824 CR393824 RN Pinus pinaster cDNA clon... 123 1e-026
gb|CO367762.1|CO367762 RTK1_36_A09.g1_A029 Roots minus pota... 123 1e-026
gb|BX250989.1|BX250989 BX250989 Pinus pinaster differenciat... 121 5e-026
gb|AI813090.1|AI813090 20F10 Pine Lambda Zap Xylem library ... 119 2e-025
gb|BQ697158.1|BQ697158 NXPV_050_C02_F NXPV (Nsf Xylem Plani... 119 2e-025
gb|CF397057.1|CF397057 RTDS2_26_D11.b1_A021 Drought-stresse... 119 2e-025
gb|CF397127.1|CF397127 RTDS2_26_D11.g1_A021 Drought-stresse... 119 2e-025
gb|CF667462.1|CF667462 RTCNT1_30_A08.g1_A029 Root control P... 119 2e-025
gb|CF668102.1|CF668102 RTCNT1_34_H10.b1_A029 Root control P... 119 2e-025
gb|CF668184.1|CF668184 RTCNT1_34_H10.g1_A029 Root control P... 119 2e-025
gb|CF669722.1|CF669722 RTCNT1_45_D11.g1_A029 Root control P... 119 2e-025
gb|CF671839.1|CF671839 RTCNT1_59_D03.g1_A029 Root control P... 119 2e-025
gb|CO160892.1|CO160892 FLD1_25_G03.b1_A029 Root flooded Pin... 119 2e-025
gb|CO160974.1|CO160974 FLD1_25_G03.g1_A029 Root flooded Pin... 119 2e-025
gb|CO161139.1|CO161139 FLD1_26_H08.g1_A029 Root flooded Pin... 119 2e-025
gb|CO172454.1|CO172454 NDL1_29_G07.g1_A029 Needles control ... 119 2e-025
gb|CO367565.1|CO367565 RTK1_35_D03.b1_A029 Roots minus pota... 119 2e-025
gb|CO367642.1|CO367642 RTK1_35_D03.g1_A029 Roots minus pota... 119 2e-025
gb|CV036288.1|CV036288 RTNACL1_58_C09.b1_A029 Roots plus ad... 119 2e-025
gb|CV036343.1|CV036343 RTNACL1_58_C09.g1_A029 Roots plus ad... 119 2e-025
gb|CX645901.1|CX645901 COLD1_6_B01.b1_A029 Root cold Pinus ... 119 2e-025
gb|CX645975.1|CX645975 COLD1_6_B01.g1_A029 Root cold Pinus ... 119 2e-025
gb|CX647804.1|CX647804 COLD1_20_G01.b1_A029 Root cold Pinus... 119 2e-025
gb|CX647845.1|CX647845 COLD1_20_G01.g1_A029 Root cold Pinus... 119 2e-025
gb|CX651320.1|CX651320 COLD1_51_C06.g1_A029 Root cold Pinus... 119 2e-025
gb|CX713183.1|CX713183 RTPQ1_7_B06.g1_A032 Roots treated wi... 119 2e-025
gb|CX713801.1|CX713801 RTPQ1_13_F08.b1_A032 Roots treated w... 119 2e-025
gb|CX713994.1|CX713994 RTPQ1_16_E07.b1_A032 Roots treated w... 119 2e-025
gb|DN627359.1|DN627359 EST978175 Subtracted pine embryo lib... 119 2e-025
gb|DN628619.1|DN628619 EST979435 Subtracted pine embryo lib... 119 2e-025
gb|DN629756.1|DN629756 EST980572 Subtracted pine embryo lib... 119 2e-025
gb|DN631513.1|DN631513 EST982329 Subtracted pine embryo lib... 119 2e-025
gb|DN633992.1|DN633992 EST984808 Subtracted pine embryo lib... 119 2e-025
gb|DR021336.1|DR021336 STRS1_44_A06.b1_A034 Shoot tip pitch... 119 2e-025
gb|DR054752.1|DR054752 RTCA1_19_H03.b1_A029 Roots minus cal... 119 2e-025
gb|DR054838.1|DR054838 RTCA1_19_H03.g1_A029 Roots minus cal... 119 2e-025
gb|DR058433.1|DR058433 RTNIT1_11_F06.g1_A029 Roots minus ni... 119 2e-025
gb|DR071299.1|DR071299 RTDK1_19_B01.b1_A029 Roots, dark Pin... 119 2e-025
gb|DR071379.1|DR071379 RTDK1_19_B01.g1_A029 Roots, dark Pin... 119 2e-025
gb|DR080632.1|DR080632 RTFEPL1_24_C10.b1_A029 Roots plus ad... 119 2e-025
gb|DR080702.1|DR080702 RTFEPL1_24_C10.g1_A029 Roots plus ad... 119 2e-025
gb|DR081149.1|DR081149 RTFEPL1_27_F06.g1_A029 Roots plus ad... 119 2e-025
gb|DR089621.1|DR089621 RTAL1_9_G11.g1_A029 Roots plus added... 119 2e-025
gb|DR094513.1|DR094513 STRR1_15_C03.b1_A033 Stem Response R... 119 2e-025
gb|DR094594.1|DR094594 STRR1_15_C03.g1_A033 Stem Response R... 119 2e-025
gb|DR098061.1|DR098061 STRR1_38_H03.g1_A033 Stem Response R... 119 2e-025
gb|DR101707.1|DR101707 STRR1_75_E10.b1_A033 Stem Response R... 119 2e-025
gb|DR101773.1|DR101773 STRR1_75_E10.g1_A033 Stem Response R... 119 2e-025
gb|DR161704.1|DR161704 RTFE1_13_A02.g1_A029 Roots minus iro... 119 2e-025
gb|DR385677.1|DR385677 RTHG1_10_D09.b1_A029 Roots plus adde... 119 2e-025
gb|DR385754.1|DR385754 RTHG1_10_D09.g1_A029 Roots plus adde... 119 2e-025
gb|BX680301.1|BX680301 BX680301 RS Pinus pinaster cDNA clon... 117 8e-025
gb|DR017136.1|DR017136 STRS1_14_F11.b1_A034 Shoot tip pitch... 117 8e-025
gb|BM159019.1|BM159019 NXLV_042_F11_F NXLV (Nsf Xylem Late ... 115 3e-024
gb|CO165516.1|CO165516 FLD1_55_C02.b1_A029 Root flooded Pin... 115 3e-024
gb|AI919851.1|AI919851 1395 Pine Lambda Zap Xylem library P... 113 1e-023
gb|BX249556.1|BX249556 BX249556 Pinus pinaster differenciat... 113 1e-023
gb|BX250256.1|BX250256 BX250256 Pinus pinaster differenciat... 113 1e-023
gb|BX252316.1|BX252316 BX252316 Pinus pinaster differenciat... 113 1e-023
gb|BX678421.1|BX678421 BX678421 RS Pinus pinaster cDNA clon... 113 1e-023
gb|DR119647.1|DR119647 RTMG1_24_C05.g1_A029 Roots minus mag... 113 1e-023
gb|BQ291380.1|BQ291380 NXRV053_C10_F NXRV (Nsf Xylem Root w... 111 5e-023
gb|CR393711.1|CR393711 CR393711 RN Pinus pinaster cDNA clon... 111 5e-023
gb|CO164917.1|CO164917 FLD1_51_D02.b1_A029 Root flooded Pin... 111 5e-023
gb|CO164990.1|CO164990 FLD1_51_D02.g1_A029 Root flooded Pin... 111 5e-023
gb|CV036071.1|CV036071 RTNACL1_44_B03.g1_A029 Roots plus ad... 111 5e-023
gb|DN630445.1|DN630445 EST981261 Subtracted pine embryo lib... 111 5e-023
gb|DR021403.1|DR021403 STRS1_44_A06.g1_A034 Shoot tip pitch... 111 5e-023
gb|DR072150.1|DR072150 RTDK1_24_H07.b1_A029 Roots, dark Pin... 111 5e-023
gb|DR387697.1|DR387697 RTHG1_23_B10.g2_A029 Roots plus adde... 111 5e-023
gb|AW011329.1|AW011329 ST19E04 Pine TriplEx shoot tip libra... 109 2e-022
gb|BX253993.1|BX253993 BX253993 Pinus pinaster differenciat... 109 2e-022
gb|BF517349.1|BF517349 NXSI_013_D11_F NXSI (Nsf Xylem Side ... 109 2e-022
gb|BQ697157.1|BQ697157 NXPV_050_C01_F NXPV (Nsf Xylem Plani... 109 2e-022
gb|BQ699796.1|BQ699796 NXRV129_D11_F NXRV (Nsf Xylem Root w... 109 2e-022
gb|DR112364.1|DR112364 RTS1_27_E02.g1_A029 Roots minus sulf... 109 2e-022
gb|BX253280.1|BX253280 BX253280 Pinus pinaster differenciat... 107 7e-022
gb|BG485797.1|BG485797 NXPV_038_H10_F NXPV (Nsf Xylem Plani... 107 7e-022
gb|CF474880.1|CF474880 RTWW2_8_B10.g1_A021 Well-watered lob... 107 7e-022
gb|BX681530.1|BX681530 BX681530 RS Pinus pinaster cDNA clon... 107 7e-022
gb|DR013476.1|DR013476 HEAT1_19_C03.g1_A029 Root at 37 C fo... 107 7e-022
gb|DR021929.1|DR021929 STRS1_47_F09.g1_A034 Shoot tip pitch... 107 7e-022
gb|DR058083.1|DR058083 RTNIT1_9_D02.g1_A029 Roots minus nit... 107 7e-022
gb|DR081571.1|DR081571 RTFEPL1_30_D09.g1_A029 Roots plus ad... 107 7e-022
gb|DR742339.1|DR742339 RTCU1_3_H03.b1_A029 Roots plus added... 107 7e-022
gb|BG317975.1|BG317975 NXPV_008_A10_F NXPV (Nsf Xylem Plani... 105 3e-021
gb|BG318118.1|BG318118 NXPV_010_F12_F NXPV (Nsf Xylem Plani... 105 3e-021
gb|BQ702704.1|BQ702704 NXSI_131_F04_F NXSI (Nsf Xylem Side ... 105 3e-021
gb|CF389667.1|CF389667 RTDR2_8_F08.g1_A021 Loblolly pine ro... 105 3e-021
gb|CF390778.1|CF390778 RTDR2_17_A10.g1_A021 Loblolly pine r... 105 3e-021
gb|CF392512.1|CF392512 RTDR3_6_H10.g1_A022 Loblolly pine ro... 105 3e-021
gb|CF478088.1|CF478088 RTWW3_17_G08.g1_A022 Well-watered lo... 105 3e-021
gb|CF479351.1|CF479351 RTWW3_23_G01.g1_A022 Well-watered lo... 105 3e-021
gb|CF671726.1|CF671726 RTCNT1_58_H07.g1_A029 Root control P... 105 3e-021
gb|CO172373.1|CO172373 NDL1_29_G07.b1_A029 Needles control ... 105 3e-021
gb|CO174183.1|CO174183 NDL1_42_H05.b1_A029 Needles control ... 105 3e-021
gb|CO197915.1|CO197915 GEO1_10_B04.b1_A029 Root gravitropis... 105 3e-021
gb|CO197983.1|CO197983 GEO1_10_B04.g1_A029 Root gravitropis... 105 3e-021
gb|CO198879.1|CO198879 GEO1_17_F05.b1_A029 Root gravitropis... 105 3e-021
gb|CO198953.1|CO198953 GEO1_17_E11.g1_A029 Root gravitropis... 105 3e-021
gb|CV033635.1|CV033635 RTNACL1_35_E07.g1_A029 Roots plus ad... 105 3e-021
gb|CV034479.1|CV034479 RTNACL1_9_E09.b1_A029 Roots plus add... 105 3e-021
gb|CV034536.1|CV034536 RTNACL1_9_E09.g1_A029 Roots plus add... 105 3e-021
gb|CX647187.1|CX647187 COLD1_14_E02.b1_A029 Root cold Pinus... 105 3e-021
gb|CX647250.1|CX647250 COLD1_14_E02.g1_A029 Root cold Pinus... 105 3e-021
gb|CX651667.1|CX651667 COLD1_54_A11.b1_A029 Root cold Pinus... 105 3e-021
gb|CX651736.1|CX651736 COLD1_54_A11.g1_A029 Root cold Pinus... 105 3e-021
gb|CX651870.1|CX651870 COLD1_55_G12.b1_A029 Root cold Pinus... 105 3e-021
gb|CX651946.1|CX651946 COLD1_55_G12.g1_A029 Root cold Pinus... 105 3e-021
gb|DN463457.1|DN463457 EST959256 Sequencing ESTs from loblo... 105 3e-021
gb|DN627545.1|DN627545 EST978361 Subtracted pine embryo lib... 105 3e-021
gb|DR011143.1|DR011143 HEAT1_3_F10.g1_A029 Root at 37 C for... 105 3e-021
gb|DR019627.1|DR019627 STRS1_31_G06.b1_A034 Shoot tip pitch... 105 3e-021
gb|DR022282.1|DR022282 STRS1_50_B07.b1_A034 Shoot tip pitch... 105 3e-021
gb|DR025461.1|DR025461 STRS1_71_F04.g1_A034 Shoot tip pitch... 105 3e-021
gb|DR048265.1|DR048265 RTBOR1_7_D03.g2_A029 Roots plus adde... 105 3e-021
gb|DR049752.1|DR049752 RTBOR1_18_G09.g1_A029 Roots plus add... 105 3e-021
gb|DR078647.1|DR078647 RTFEPL1_6_B04.b1_A029 Roots plus add... 105 3e-021
gb|DR080914.1|DR080914 RTFEPL1_26_D01.b1_A029 Roots plus ad... 105 3e-021
gb|DR080989.1|DR080989 RTFEPL1_26_D01.g1_A029 Roots plus ad... 105 3e-021
gb|DR117517.1|DR117517 RTMG1_7_A10.g1_A029 Roots minus magn... 105 3e-021
gb|DR120664.1|DR120664 RTMG1_31_D12.b1_A029 Roots minus mag... 105 3e-021
gb|DR120748.1|DR120748 RTMG1_31_D12.g1_A029 Roots minus mag... 105 3e-021
gb|DR181145.1|DR181145 RTMNUT1_37_C10.b2_A029 Roots minus m... 105 3e-021
gb|DR181222.1|DR181222 RTMNUT1_37_C10.g2_A029 Roots minus m... 105 3e-021
gb|DR743944.1|DR743944 RTCU1_19_E03.b1_A029 Roots plus adde... 105 3e-021
gb|DR744013.1|DR744013 RTCU1_19_E03.g1_A029 Roots plus adde... 105 3e-021
gb|DT627173.1|DT627173 EST1160249 Sequencing ESTs from lobl... 105 3e-021
gb|AW011064.1|AW011064 ST16C07 Pine TriplEx shoot tip libra... 103 1e-020
gb|AW011444.1|AW011444 ST20G12 Pine TriplEx shoot tip libra... 103 1e-020
gb|AW984997.1|AW984997 NXNV_118_H06_F Nsf Xylem Normal wood... 103 1e-020
gb|BF778608.1|BF778608 NXSI_088_F06_F NXSI (Nsf Xylem Side ... 103 1e-020
gb|CF388437.1|CF388437 RTDR2_3_H10.b1_A021 Loblolly pine ro... 103 1e-020
gb|CF389555.1|CF389555 RTDR2_8_F08.b1_A021 Loblolly pine ro... 103 1e-020
gb|CF479295.1|CF479295 RTWW3_23_E01.b1_A022 Well-watered lo... 103 1e-020
gb|BX680186.1|BX680186 BX680186 RS Pinus pinaster cDNA clon... 103 1e-020
gb|CV034473.1|CV034473 RTNACL1_9_D09.b1_A029 Roots plus add... 103 1e-020
gb|CX647911.1|CX647911 COLD1_25_G05.b1_A029 Root cold Pinus... 103 1e-020
gb|DN631382.1|DN631382 EST982198 Subtracted pine embryo lib... 103 1e-020
gb|DR020200.1|DR020200 STRS1_35_G05.b1_A034 Shoot tip pitch... 103 1e-020
gb|DR025373.1|DR025373 STRS1_71_F04.b1_A034 Shoot tip pitch... 103 1e-020
gb|DR048182.1|DR048182 RTBOR1_7_D03.b2_A029 Roots plus adde... 103 1e-020
gb|DR049675.1|DR049675 RTBOR1_18_G09.b1_A029 Roots plus add... 103 1e-020
gb|DR078009.1|DR078009 RTFEPL1_1_H02.b1_A029 Roots plus add... 103 1e-020
gb|DR092653.1|DR092653 STRR1_2_G02.g1_A033 Stem Response Re... 103 1e-020
gb|DR177395.1|DR177395 RTMNUT1_5_C10.b1_A029 Roots minus mi... 103 1e-020
gb|DR177483.1|DR177483 RTMNUT1_5_C10.g1_A029 Roots minus mi... 103 1e-020
gb|DR387618.1|DR387618 RTHG1_23_B10.b1_A029 Roots plus adde... 103 1e-020
gb|AW056447.1|AW056447 ST52A04 Pine TriplEx shoot tip libra... 101 5e-020
gb|AW056627.1|AW056627 ST53G10 Pine TriplEx shoot tip libra... 101 5e-020
gb|AW754903.1|AW754903 PC08B09 Pine TriplEx pollen cone lib... 101 5e-020
gb|BG039550.1|BG039550 NXSI_100_C11_F NXSI (Nsf Xylem Side ... 101 5e-020
gb|BG040481.1|BG040481 NXSI_108_F11_F NXSI (Nsf Xylem Side ... 101 5e-020
gb|BG318199.1|BG318199 NXPV_011_F11_F NXPV (Nsf Xylem Plani... 101 5e-020
gb|DN633278.1|DN633278 EST984094 Subtracted pine embryo lib... 101 5e-020
gb|DR101129.1|DR101129 STRR1_70_F06.g1_A033 Stem Response R... 101 5e-020
gb|DR102260.1|DR102260 STRR1_79_E06.g1_A033 Stem Response R... 101 5e-020
gb|BE209137.1|BE209137 NXNV_164_D02_F Nsf Xylem Normal wood... 100 2e-019
gb|BF778586.1|BF778586 NXSI_088_D07_F NXSI (Nsf Xylem Side ... 100 2e-019
gb|DR181367.1|DR181367 RTMNUT1_38_A12.g2_A029 Roots minus m... 100 2e-019
gb|BX249420.1|BX249420 BX249420 Pinus pinaster differenciat... 98 7e-019
gb|BE657073.1|BE657073 NXCI_042_A12_F NXCI (Nsf Xylem Compr... 98 7e-019
gb|BF609356.1|BF609356 NXSI_045_D01_F NXSI (Nsf Xylem Side ... 98 7e-019
gb|BF777447.1|BF777447 NXSI_071_F12_F NXSI (Nsf Xylem Side ... 98 7e-019
gb|BQ107687.1|BQ107687 NXLV103_B01_F NXLV (Nsf Xylem Late w... 98 7e-019
gb|CF398472.1|CF398472 RTDS3_15_A08.b1_A022 Drought-stresse... 98 7e-019
gb|CV034530.1|CV034530 RTNACL1_9_D09.g1_A029 Roots plus add... 98 7e-019
gb|CX650028.1|CX650028 COLD1_43_C02.b1_A029 Root cold Pinus... 98 7e-019
gb|CX650106.1|CX650106 COLD1_43_C02.g1_A029 Root cold Pinus... 98 7e-019
gb|DR072225.1|DR072225 RTDK1_24_H07.g1_A029 Roots, dark Pin... 98 7e-019
gb|DR078727.1|DR078727 RTFEPL1_6_B04.g1_A029 Roots plus add... 98 7e-019
gb|DR119669.1|DR119669 RTMG1_24_E08.g1_A029 Roots minus mag... 98 7e-019
gb|AA556455.1|AA556455 310 Loblolly pine C Pinus taeda cDNA... 96 3e-018
gb|CF475132.1|CF475132 RTWW2_14_A08.b1_A021 Well-watered lo... 96 3e-018
gb|CF666301.1|CF666301 RTCNT1_22_G04.b1_A029 Root control P... 96 3e-018
gb|CR354724.1|CR354724 CR354724 Pinus pinaster differenciat... 96 3e-018
gb|CO166075.1|CO166075 FLD1_59_D07.b1_A029 Root flooded Pin... 96 3e-018
gb|DN629369.1|DN629369 EST980185 Subtracted pine embryo lib... 96 3e-018
gb|DN632755.1|DN632755 EST983571 Subtracted pine embryo lib... 96 3e-018
gb|DN632790.1|DN632790 EST983606 Subtracted pine embryo lib... 96 3e-018
gb|DR011547.1|DR011547 HEAT1_6_A01.g1_A029 Root at 37 C for... 96 3e-018
gb|DR056753.1|DR056753 RTCA1_32_G05.b1_A029 Roots minus cal... 96 3e-018
gb|DR095884.1|DR095884 STRR1_24_F10.b1_A033 Stem Response R... 96 3e-018
gb|DR179076.1|DR179076 RTMNUT1_15_G07.g1_A029 Roots minus m... 96 3e-018
gb|BM493932.1|BM493932 NXLV_071_F11_F NXLV (Nsf Xylem Late ... 94 1e-017
gb|BQ635040.1|BQ635040 NXRV076_C01_F NXRV (Nsf Xylem Root w... 94 1e-017
gb|AW056792.1|AW056792 ST56A12 Pine TriplEx shoot tip libra... 92 4e-017
gb|AW736791.1|AW736791 NXNV_083_A04_F Nsf Xylem Normal wood... 92 4e-017
gb|AW736792.1|AW736792 NXNV_083_A06_F Nsf Xylem Normal wood... 92 4e-017
gb|BE496608.1|BE496608 NXCI_021_F05_F NXCI (Nsf Xylem Compr... 92 4e-017
gb|BF777835.1|BF777835 NXSI_076_D03_F NXSI (Nsf Xylem Side ... 92 4e-017
gb|BQ197623.1|BQ197623 NXLV118_E03_F NXLV (Nsf Xylem Late w... 92 4e-017
gb|BQ702159.1|BQ702159 NXSI_125_F03_F NXSI (Nsf Xylem Side ... 92 4e-017
gb|BQ702297.1|BQ702297 NXSI_127_B04_F NXSI (Nsf Xylem Side ... 92 4e-017
gb|BX255090.1|BX255090 BX255090 Pinus pinaster differenciat... 90 2e-016
gb|CF671646.1|CF671646 RTCNT1_58_H07.b1_A029 Root control P... 90 2e-016
gb|CO166393.1|CO166393 FLD1_61_D11.g1_A029 Root flooded Pin... 90 2e-016
gb|CO174271.1|CO174271 NDL1_42_H05.g1_A029 Needles control ... 90 2e-016
gb|CX647257.1|CX647257 COLD1_14_F02.g1_A029 Root cold Pinus... 90 2e-016
gb|CX713473.1|CX713473 RTPQ1_9_D06.g1_A032 Roots treated wi... 90 2e-016
gb|DR081082.1|DR081082 RTFEPL1_27_F06.b1_A029 Roots plus ad... 90 2e-016
gb|DR111572.1|DR111572 RTS1_18_F09.g1_A029 Roots minus sulf... 90 2e-016
gb|DR112792.1|DR112792 RTS1_30_D05.g1_A029 Roots minus sulf... 90 2e-016
gb|AA739996.1|AA739996 761 PtIFG2 Pinus taeda cDNA clone 92... 88 7e-016
gb|BE662484.1|BE662484 ST86/ST86E03 Pine TriplEx shoot tip ... 88 7e-016
gb|BI397717.1|BI397717 NXPV_104_E03_F NXPV (Nsf Xylem Plani... 88 7e-016
gb|BI643824.1|BI643824 NXPV_123_D09_F NXPV (Nsf Xylem Plani... 88 7e-016
gb|CV034101.1|CV034101 RTNACL1_38_D12.g1_A029 Roots plus ad... 88 7e-016
gb|CX714101.1|CX714101 RTPQ1_17_F01.g1_A032 Roots treated w... 88 7e-016
gb|DR088703.1|DR088703 RTAL1_3_H10.g1_A029 Roots plus added... 88 7e-016
gb|AI919774.1|AI919774 1318 Pine Lambda Zap Xylem library P... 84 1e-014
gb|BQ698247.1|BQ698247 NXPV_065_C10_F NXPV (Nsf Xylem Plani... 84 1e-014
gb|CF389404.1|CF389404 RTDR2_7_A10.b1_A021 Loblolly pine ro... 84 1e-014
gb|CX648327.1|CX648327 COLD1_28_A04.b1_A029 Root cold Pinus... 84 1e-014
gb|BM903032.1|BM903032 NXLV_078_D02_F NXLV (Nsf Xylem Late ... 82 4e-014
gb|BQ197348.1|BQ197348 NXLV112_G11_F NXLV (Nsf Xylem Late w... 82 4e-014
gb|CF390970.1|CF390970 RTDR3_3_H04.b1_A022 Loblolly pine ro... 82 4e-014
gb|BE644001.1|BE644001 NXCI_053_C12_F NXCI (Nsf Xylem Compr... 80 2e-013
gb|BG039855.1|BG039855 NXSI_104_G07_F NXSI (Nsf Xylem Side ... 80 2e-013
gb|CX715365.1|CX715365 RTPQ1_33_E04.g1_A032 Roots treated w... 80 2e-013
gb|DR011079.1|DR011079 HEAT1_3_F10.b1_A029 Root at 37 C for... 80 2e-013
gb|DR047771.1|DR047771 RTBOR1_3_A03.g1_A029 Roots plus adde... 80 2e-013
gb|CD021503.1|CD021503 NXNV_146_C04_F Nsf Xylem Normal wood... 78 7e-013
gb|AW290173.1|AW290173 NXNV015B10F Nsf Xylem Normal wood Ve... 76 3e-012
gb|CD026838.1|CD026838 NXNV015B10 Nsf Xylem Normal wood Ver... 76 3e-012
gb|BF610230.1|BF610230 NXSI_056_F03_F NXSI (Nsf Xylem Side ... 74 1e-011
gb|BG039464.1|BG039464 NXSI_099_C09_F NXSI (Nsf Xylem Side ... 74 1e-011
gb|CF666293.1|CF666293 RTCNT1_22_F05.b1_A029 Root control P... 74 1e-011
gb|BX680520.1|BX680520 BX680520 RS Pinus pinaster cDNA clon... 74 1e-011
gb|CR393439.1|CR393439 CR393439 RN Pinus pinaster cDNA clon... 74 1e-011
gb|DR097983.1|DR097983 STRR1_38_H03.b1_A033 Stem Response R... 74 1e-011
gb|AW056848.1|AW056848 ST57B01 Pine TriplEx shoot tip libra... 72 4e-011
gb|BG319331.1|BG319331 NXPV_026_F03_F NXPV (Nsf Xylem Plani... 72 4e-011
gb|BQ697525.1|BQ697525 NXPV_054_E05_F NXPV (Nsf Xylem Plani... 72 4e-011
gb|BQ697966.1|BQ697966 NXPV_063_A08_F NXPV (Nsf Xylem Plani... 72 4e-011
gb|BX682034.1|BX682034 BX682034 RS Pinus pinaster cDNA clon... 72 4e-011
gb|AL750978.1|AL750978 AL750978 RS Pinus pinaster cDNA clon... 70 2e-010
gb|BG319042.1|BG319042 NXPV_022_H11_F NXPV (Nsf Xylem Plani... 70 2e-010
gb|BQ696733.1|BQ696733 NXPV_044_E11_F NXPV (Nsf Xylem Plani... 70 2e-010
gb|BX682708.1|BX682708 BX682708 Pinus pinaster differenciat... 70 2e-010
gb|DN628405.1|DN628405 EST979221 Subtracted pine embryo lib... 70 2e-010
gb|BX252144.1|BX252144 BX252144 Pinus pinaster differenciat... 68 6e-010
gb|BE496555.1|BE496555 NXCI_020_E11_F NXCI (Nsf Xylem Compr... 68 6e-010
gb|BM493596.1|BM493596 NXLV_068_A04_F NXLV (Nsf Xylem Late ... 68 6e-010
gb|DR024332.1|DR024332 STRS1_64_E05.b1_A034 Shoot tip pitch... 68 6e-010
gb|BX253599.1|BX253599 BX253599 Pinus pinaster differenciat... 66 3e-009
gb|BE049798.1|BE049798 NXNV_144_C11_F Nsf Xylem Normal wood... 66 3e-009
gb|BM902683.1|BM902683 NXLV_057_G03_F NXLV (Nsf Xylem Late ... 66 3e-009
gb|BQ197740.1|BQ197740 NXLV115_D04_F NXLV (Nsf Xylem Late w... 66 3e-009
gb|CF477964.1|CF477964 RTWW3_17_G08.b1_A022 Well-watered lo... 66 3e-009
gb|CD018405.1|CD018405 NXLV_022_H12_F NXLV (Nsf Xylem Late ... 64 1e-008
gb|BG317532.1|BG317532 NXPV_002_H06_F NXPV (Nsf Xylem Plani... 62 4e-008
gb|CF667460.1|CF667460 RTCNT1_30_A05.g1_A029 Root control P... 62 4e-008
gb|BX682715.1|BX682715 BX682715 Pinus pinaster differenciat... 62 4e-008
gb|DT627945.1|DT627945 EST1156694 Subtracted pine embryo li... 62 4e-008
gb|AW887977.1|AW887977 NXNV_105_A08_F Nsf Xylem Normal wood... 60 2e-007
gb|BE458100.1|BE458100 NXCI_008_B09_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|CD021476.1|CD021476 NXNV_145_F07_F Nsf Xylem Normal wood... 60 2e-007
gb|CF392491.1|CF392491 RTDR3_6_H10.b1_A022 Loblolly pine ro... 60 2e-007
gb|CF670718.1|CF670718 RTCNT1_52_C04.b1_A029 Root control P... 60 2e-007
gb|CO199047.1|CO199047 GEO1_18_A02.g1_A029 Root gravitropis... 60 2e-007
gb|DR092044.1|DR092044 RTAL1_25_H12.g1_A029 Roots plus adde... 60 2e-007
gb|AJ541801.1|AJ541801 AJ541801 Pinus pinaster differentiat... 58 6e-007
gb|CN852448.1|CN852448 H6 Healthy pine stem suppression sub... 58 6e-007
gb|DT629870.1|DT629870 EST1154282 Subtracted pine embryo li... 58 6e-007
gb|DT630070.1|DT630070 EST1154482 Subtracted pine embryo li... 58 6e-007
gb|AW697585.1|AW697585 ST59D03 Pine TriplEx shoot tip libra... 56 2e-006
gb|BX000658.1|BX000658 BX000658 Pinus pinaster xylem Pinus ... 56 2e-006
gb|BE187276.1|BE187276 NXNV_76_G06_F Nsf Xylem Normal wood ... 56 2e-006
gb|CN784519.1|CN784519 EST783210 Sequencing ESTs from loblo... 56 2e-006
gb|CO161140.1|CO161140 FLD1_26_H09.g1_A029 Root flooded Pin... 56 2e-006
gb|CO163594.1|CO163594 FLD1_42_C10.g1_A029 Root flooded Pin... 56 2e-006
gb|CO409590.1|CO409590 EST839975 Sequencing ESTs from loblo... 56 2e-006
gb|CO409687.1|CO409687 EST840072 Sequencing ESTs from loblo... 56 2e-006
gb|CO411167.1|CO411167 EST841552 Sequencing ESTs from loblo... 56 2e-006
gb|CO411285.1|CO411285 EST841670 Sequencing ESTs from loblo... 56 2e-006
gb|CO412575.1|CO412575 EST842960 Sequencing ESTs from loblo... 56 2e-006
gb|CO412765.1|CO412765 EST843150 Sequencing ESTs from loblo... 56 2e-006
gb|CO413006.1|CO413006 EST843391 Sequencing ESTs from loblo... 56 2e-006
gb|CO413139.1|CO413139 EST843524 Sequencing ESTs from loblo... 56 2e-006
gb|CO413630.1|CO413630 EST844015 Sequencing ESTs from loblo... 56 2e-006
gb|CO413720.1|CO413720 EST844105 Sequencing ESTs from loblo... 56 2e-006
gb|CO414408.1|CO414408 EST844793 Sequencing ESTs from loblo... 56 2e-006
gb|CV133957.1|CV133957 EST845166 Sequencing ESTs from loblo... 56 2e-006
gb|CV135538.1|CV135538 EST846747 Sequencing ESTs from loblo... 56 2e-006
gb|CV137108.1|CV137108 EST848317 Sequencing ESTs from loblo... 56 2e-006
gb|CV137981.1|CV137981 EST849190 Sequencing ESTs from loblo... 56 2e-006
gb|CV138171.1|CV138171 EST849380 Sequencing ESTs from loblo... 56 2e-006
gb|CV138359.1|CV138359 EST849568 Sequencing ESTs from loblo... 56 2e-006
gb|CV139074.1|CV139074 EST850283 Sequencing ESTs from loblo... 56 2e-006
gb|CV139136.1|CV139136 EST850345 Sequencing ESTs from loblo... 56 2e-006
gb|CV139237.1|CV139237 EST850446 Sequencing ESTs from loblo... 56 2e-006
gb|CV143352.1|CV143352 EST854561 Sequencing ESTs from loblo... 56 2e-006
gb|CV144123.1|CV144123 EST855332 Sequencing ESTs from loblo... 56 2e-006
gb|CV144439.1|CV144439 EST855648 Sequencing ESTs from loblo... 56 2e-006
gb|CV146670.1|CV146670 EST857879 Sequencing ESTs from loblo... 56 2e-006
gb|CV147571.1|CV147571 EST858780 Sequencing ESTs from loblo... 56 2e-006
gb|CV147574.1|CV147574 EST858783 Sequencing ESTs from loblo... 56 2e-006
gb|CX651796.1|CX651796 COLD1_54_G08.g1_A029 Root cold Pinus... 56 2e-006
gb|DN445709.1|DN445709 EST941508 Sequencing ESTs from loblo... 56 2e-006
gb|DN445877.1|DN445877 EST941676 Sequencing ESTs from loblo... 56 2e-006
gb|DN446160.1|DN446160 EST941959 Sequencing ESTs from loblo... 56 2e-006
gb|DN448344.1|DN448344 EST944143 Sequencing ESTs from loblo... 56 2e-006
gb|DN449028.1|DN449028 EST944827 Sequencing ESTs from loblo... 56 2e-006
gb|DN452248.1|DN452248 EST948047 Sequencing ESTs from loblo... 56 2e-006
gb|DN455568.1|DN455568 EST951367 Sequencing ESTs from loblo... 56 2e-006
gb|DN456376.1|DN456376 EST952175 Sequencing ESTs from loblo... 56 2e-006
gb|DN457508.1|DN457508 EST953307 Sequencing ESTs from loblo... 56 2e-006
gb|DN458205.1|DN458205 EST954004 Sequencing ESTs from loblo... 56 2e-006
gb|DN460110.1|DN460110 EST955909 Sequencing ESTs from loblo... 56 2e-006
gb|DN460597.1|DN460597 EST956396 Sequencing ESTs from loblo... 56 2e-006
gb|DN462279.1|DN462279 EST958078 Sequencing ESTs from loblo... 56 2e-006
gb|DN463234.1|DN463234 EST959033 Sequencing ESTs from loblo... 56 2e-006
gb|DN463377.1|DN463377 EST959176 Sequencing ESTs from loblo... 56 2e-006
gb|DN463852.1|DN463852 EST959651 Sequencing ESTs from loblo... 56 2e-006
gb|DN463992.1|DN463992 EST959791 Sequencing ESTs from loblo... 56 2e-006
gb|DN464384.1|DN464384 EST960183 Sequencing ESTs from loblo... 56 2e-006
gb|DN608513.1|DN608513 EST961563 Subtracted pine embryo lib... 56 2e-006
gb|DN612450.1|DN612450 EST965500 Subtracted pine embryo lib... 56 2e-006
gb|DN615105.1|DN615105 EST968155 Subtracted pine embryo lib... 56 2e-006
gb|DN615502.1|DN615502 EST968552 Subtracted pine embryo lib... 56 2e-006
gb|DN626518.1|DN626518 EST977334 Subtracted pine embryo lib... 56 2e-006
gb|DN627207.1|DN627207 EST978023 Subtracted pine embryo lib... 56 2e-006
gb|DN627588.1|DN627588 EST978404 Subtracted pine embryo lib... 56 2e-006
gb|DN627950.1|DN627950 EST978766 Subtracted pine embryo lib... 56 2e-006
gb|DN629798.1|DN629798 EST980614 Subtracted pine embryo lib... 56 2e-006
gb|DN632604.1|DN632604 EST983420 Subtracted pine embryo lib... 56 2e-006
gb|DN633429.1|DN633429 EST984245 Subtracted pine embryo lib... 56 2e-006
gb|DR052065.1|DR052065 RTCA1_2_E07.b1_A029 Roots minus calc... 56 2e-006
gb|DR052144.1|DR052144 RTCA1_2_E07.g1_A029 Roots minus calc... 56 2e-006
gb|DR052188.1|DR052188 RTCA1_3_A11.b1_A029 Roots minus calc... 56 2e-006
gb|DR052260.1|DR052260 RTCA1_3_A11.g1_A029 Roots minus calc... 56 2e-006
gb|DR058689.1|DR058689 RTNIT1_13_G04.b1_A029 Roots minus ni... 56 2e-006
gb|DR058777.1|DR058777 RTNIT1_13_G04.g1_A029 Roots minus ni... 56 2e-006
gb|DR089378.1|DR089378 RTAL1_8_G04.b1_A029 Roots plus added... 56 2e-006
gb|DR089457.1|DR089457 RTAL1_8_G04.g1_A029 Roots plus added... 56 2e-006
gb|DR097324.1|DR097324 STRR1_34_A03.b1_A033 Stem Response R... 56 2e-006
gb|DR097396.1|DR097396 STRR1_34_A03.g3_A033 Stem Response R... 56 2e-006
gb|DR167346.1|DR167346 RTPHOS1_18_F03.b1_A029 Roots minus p... 56 2e-006
gb|DR167428.1|DR167428 RTPHOS1_18_F03.g1_A029 Roots minus p... 56 2e-006
gb|DR745871.1|DR745871 RTCU1_33_D09.b1_A029 Roots plus adde... 56 2e-006
gb|DT624836.1|DT624836 EST1159111 Sequencing ESTs from lobl... 56 2e-006
gb|DT625280.1|DT625280 EST1159555 Sequencing ESTs from lobl... 56 2e-006
gb|DT629762.1|DT629762 EST1154174 Subtracted pine embryo li... 56 2e-006
gb|DT629895.1|DT629895 EST1154307 Subtracted pine embryo li... 56 2e-006
gb|DT630098.1|DT630098 EST1154510 Subtracted pine embryo li... 56 2e-006
gb|DT630183.1|DT630183 EST1154595 Subtracted pine embryo li... 56 2e-006
gb|DT630462.1|DT630462 EST1154874 Subtracted pine embryo li... 56 2e-006
gb|DT630575.1|DT630575 EST1154987 Subtracted pine embryo li... 56 2e-006
gb|DT630733.1|DT630733 EST1155145 Subtracted pine embryo li... 56 2e-006
gb|BI077216.1|BI077216 NXPV_094_D05_F NXPV (Nsf Xylem Plani... 54 1e-005
gb|CR394040.1|CR394040 CR394040 RN Pinus pinaster cDNA clon... 54 1e-005
gb|CN852410.1|CN852410 H15 Healthy pine stem suppression su... 54 1e-005
gb|CN852432.1|CN852432 H35 Healthy pine stem suppression su... 54 1e-005
gb|DN609110.1|DN609110 EST962160 Subtracted pine embryo lib... 54 1e-005
gb|DN609661.1|DN609661 EST962711 Subtracted pine embryo lib... 54 1e-005
gb|DN609774.1|DN609774 EST962824 Subtracted pine embryo lib... 54 1e-005
gb|DN609848.1|DN609848 EST962898 Subtracted pine embryo lib... 54 1e-005
gb|DN609916.1|DN609916 EST962966 Subtracted pine embryo lib... 54 1e-005
gb|DN610046.1|DN610046 EST963096 Subtracted pine embryo lib... 54 1e-005
gb|DN610547.1|DN610547 EST963597 Subtracted pine embryo lib... 54 1e-005
gb|DN611197.1|DN611197 EST964247 Subtracted pine embryo lib... 54 1e-005
gb|DN611492.1|DN611492 EST964542 Subtracted pine embryo lib... 54 1e-005
gb|DN612311.1|DN612311 EST965361 Subtracted pine embryo lib... 54 1e-005
gb|DN612328.1|DN612328 EST965378 Subtracted pine embryo lib... 54 1e-005
gb|DN612830.1|DN612830 EST965880 Subtracted pine embryo lib... 54 1e-005
gb|DN614149.1|DN614149 EST967199 Subtracted pine embryo lib... 54 1e-005
gb|DN615151.1|DN615151 EST968201 Subtracted pine embryo lib... 54 1e-005
gb|DN615446.1|DN615446 EST968496 Subtracted pine embryo lib... 54 1e-005
gb|DN615643.1|DN615643 EST968693 Subtracted pine embryo lib... 54 1e-005
gb|DT627937.1|DT627937 EST1156686 Subtracted pine embryo li... 54 1e-005
gb|DT627981.1|DT627981 EST1156730 Subtracted pine embryo li... 54 1e-005
gb|DT628191.1|DT628191 EST1156940 Subtracted pine embryo li... 54 1e-005
gb|DT628565.1|DT628565 EST1157314 Subtracted pine embryo li... 54 1e-005
gb|DT628875.1|DT628875 EST1155445 Subtracted pine embryo li... 54 1e-005
gb|DT629112.1|DT629112 EST1155682 Subtracted pine embryo li... 54 1e-005
gb|DT629526.1|DT629526 EST1156096 Subtracted pine embryo li... 54 1e-005
gb|DT629582.1|DT629582 EST1156152 Subtracted pine embryo li... 54 1e-005
gb|DT629610.1|DT629610 EST1156180 Subtracted pine embryo li... 54 1e-005
gb|DT629760.1|DT629760 EST1154172 Subtracted pine embryo li... 54 1e-005
gb|DT629871.1|DT629871 EST1154283 Subtracted pine embryo li... 54 1e-005
gb|DT629912.1|DT629912 EST1154324 Subtracted pine embryo li... 54 1e-005
>gb|AA556240.1|AA556240 95 Loblolly pine CA Pinus taeda cDNA clone 1CA7E, mRNA sequence
Length = 581
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 409 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 350
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 349 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 290
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 289 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 230
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 229 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 171
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 170 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 111
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 110 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 51
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 50 ctccttgaggatccgcttggatgccat 24
>gb|AI812690.1|AI812690 17H7 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 545
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 460 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 401
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 400 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 341
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 340 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 281
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 280 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 222
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 221 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 162
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 161 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 102
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 101 ctccttgaggatccgcttggatgccat 75
>gb|BX250820.1|BX250820 BX250820 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041G03 similar to UBIQUITIN CONJUGATING
ENZYME E2, mRNA sequence
Length = 651
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 513 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 454
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 453 aaagagcatattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 394
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| |||||||| || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 393 aagatgtcgaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 334
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 333 aacgcgaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 275
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| ||||||||||| || |||||
Sbjct: 274 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccaatgaaacat 215
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 214 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 155
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 154 ctccttgaggatccgcttggatgccat 128
>gb|BX251755.1|BX251755 BX251755 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP054H10 similar to UBIQUITIN CONJUGATING
ENZYME E2, mRNA sequence
Length = 733
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 445 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 386
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 385 aaagagcatattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 326
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| |||||||| || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 325 aagatgtcgaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 266
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 265 aacgcgaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 207
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| ||||||||||| || |||||
Sbjct: 206 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccaatgaaacat 147
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 146 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 87
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 86 ctccttgaggatccgcttggatgccat 60
>gb|BX254052.1|BX254052 BX254052 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092F09 similar to UBIQUITIN CONJUGATING
ENZYME E2, mRNA sequence
Length = 680
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 484 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 425
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 424 aaagagcatattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 365
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| |||||||| || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 364 aagatgtcgaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 305
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 304 aacgcgaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 246
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| ||||||||||| || |||||
Sbjct: 245 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccaatgaaacat 186
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 185 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 126
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 125 ctccttgaggatccgcttggatgccat 99
>gb|BF609066.1|BF609066 NXSI_040_A08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_040_A08 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 525
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 466 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 407
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 406 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 347
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 346 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 287
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 286 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 228
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 227 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 168
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 167 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 108
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 107 ctccttgaggatccgcttggatgccat 81
>gb|BQ633955.1|BQ633955 NXRV062_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV062_H08 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 699
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 518 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 459
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 458 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 399
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 398 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 339
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 338 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 280
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 279 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 220
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 219 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 160
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 159 ctccttgaggatccgcttggatgccat 133
>gb|CF672315.1|CF672315 RTCNT1_62_F02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_F02_A029 5', mRNA sequence
Length = 761
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 469 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 410
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 409 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 350
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 349 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 290
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 289 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 231
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 230 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 171
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 170 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 111
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 110 ctccttgaggatccgcttagatgccat 84
>gb|BX679956.1|BX679956 BX679956 RS Pinus pinaster cDNA clone RS37A02, mRNA sequence
Length = 560
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 456 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 397
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 396 aaagagcatattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 337
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| |||||||| || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 336 aagatgtcgaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 277
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 276 aacgcgaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 218
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| ||||||||||| || |||||
Sbjct: 217 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccaatgaaacat 158
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 157 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 98
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 97 ctccttgaggatccgcttggatgccat 71
>gb|CX648547.1|CX648547 COLD1_29_H01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_H01_A029 3', mRNA sequence
Length = 841
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 324 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 383
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 384 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 443
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 444 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 503
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 504 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 562
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 563 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 622
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 623 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 682
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 683 ctccttgaggatccgcttggatgccat 709
>gb|CX648626.1|CX648626 COLD1_29_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_H01_A029 5', mRNA sequence
Length = 842
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 416 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 475
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 476 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 535
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 536 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 595
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 596 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 654
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 655 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 714
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 715 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 774
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 775 ctccttgaggatccgcttggatgccat 801
>gb|CX648647.1|CX648647 COLD1_30_B04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_30_B04_A029 3', mRNA sequence
Length = 763
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 404 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 345
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 344 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 285
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 284 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 225
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 224 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 166
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 165 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 106
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 105 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 46
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 45 ctccttgaggatccgcttggatgccat 19
>gb|CX648722.1|CX648722 COLD1_30_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_30_B04_A029 5', mRNA sequence
Length = 749
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 513 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 454
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 453 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 394
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 393 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 334
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 333 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 275
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 274 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 215
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 214 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 155
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 154 ctccttgaggatccgcttggatgccat 128
>gb|CX649591.1|CX649591 COLD1_36_F02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_F02_A029 3', mRNA sequence
Length = 838
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 323 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 382
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 383 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 442
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 443 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 502
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 503 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 561
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 562 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 621
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 622 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 681
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 682 ctccttgaggatccgcttggatgccat 708
>gb|DR014446.1|DR014446 HEAT1_49_C03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_C03_A029 5', mRNA sequence
Length = 817
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 503 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 444
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 443 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 384
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 383 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 324
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 323 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 265
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 264 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 205
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 204 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 145
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 144 ctccttgaggatccgcttggatgccat 118
>gb|DR015147.1|DR015147 STRS1_1_F08.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_1_F08_A034 5', mRNA sequence
Length = 834
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 470 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 411
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 410 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 351
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 350 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 291
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 290 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 232
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 231 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 172
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 171 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 112
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 111 ctccttgaggatccgcttggatgccat 85
>gb|DR015277.1|DR015277 STRS1_2_C01.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C01_A034 5', mRNA sequence
Length = 816
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 495 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 436
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 435 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 376
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 375 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 316
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 315 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 257
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 256 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 197
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 196 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 137
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 136 ctccttgaggatccgcttggatgccat 110
>gb|DR015325.1|DR015325 STRS1_2_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_G03_A034 5', mRNA sequence
Length = 845
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 423 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 364
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 363 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 304
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 303 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 244
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 243 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 185
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 184 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 125
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 124 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 65
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 64 ctccttgaggatccgcttggatgccat 38
>gb|DR019734.1|DR019734 STRS1_32_C04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_C04_A034 3', mRNA sequence
Length = 745
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 453 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 394
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 393 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 334
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 333 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 274
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 273 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 215
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 214 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 155
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 154 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 95
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 94 ctccttgaggatccgcttggatgccat 68
>gb|DR019807.1|DR019807 STRS1_32_C04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_C04_A034 5', mRNA sequence
Length = 681
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 424 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 365
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 364 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 305
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 304 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 245
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 244 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 186
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 185 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 126
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 125 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 66
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 65 ctccttgaggatccgcttggatgccat 39
>gb|DR110669.1|DR110669 RTS1_12_F03.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_F03_A029 3', mRNA sequence
Length = 855
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 387 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 446
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 447 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 506
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 507 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 566
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 567 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 625
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 626 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 685
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 686 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 745
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 746 ctccttgaggatccgcttggatgccat 772
>gb|DR110755.1|DR110755 RTS1_12_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_12_F03_A029 5', mRNA sequence
Length = 869
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 391 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 450
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 451 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 510
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 511 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 570
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 571 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 629
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 630 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 689
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 690 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 749
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 750 ctccttgaggatccgcttggatgccat 776
>gb|DR181382.1|DR181382 RTMNUT1_38_C05.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_C05_A029 5', mRNA sequence
Length = 691
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 497 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 438
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 437 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 378
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 377 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 318
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 317 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 259
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 258 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 199
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 198 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 139
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 138 ctccttgaggatccgcttggatgccat 112
>gb|DR384469.1|DR384469 RTHG1_2_A10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_2_A10_A029 5', mRNA sequence
Length = 775
Score = 180 bits (91), Expect = 6e-044
Identities = 315/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 514 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 455
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 454 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 395
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 394 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 335
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 334 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 276
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 275 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 216
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 215 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 156
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 155 ctccttgaggatccgcttagatgccat 129
>gb|BG040770.1|BG040770 NXSI_114_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_G09 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 538
Score = 174 bits (88), Expect = 4e-042
Identities = 314/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| || || || | |
Sbjct: 510 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggntccgtcaac 451
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 450 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 391
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 390 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 331
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 330 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 272
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 271 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 212
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 211 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 152
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 151 ctccttgaggatccgcttggatgccat 125
>gb|DR090603.1|DR090603 RTAL1_16_E07.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_E07_A029 3', mRNA sequence
Length = 538
Score = 174 bits (88), Expect = 4e-042
Identities = 303/372 (81%), Gaps = 2/372 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 383 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 324
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 323 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 264
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 263 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 204
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 203 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 145
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 144 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 85
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 84 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 25
Query: 685 ttccttgaggat 696
|||||||||||
Sbjct: 24 ctccttgaggat 13
>gb|AW043194.1|AW043194 ST30D11 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST30D11, mRNA sequence
Length = 601
Score = 172 bits (87), Expect = 1e-041
Identities = 314/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| | ||| || | |
Sbjct: 553 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttgaatccgtcaac 494
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 493 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 434
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 433 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 374
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 373 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 315
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 314 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 255
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 254 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 195
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 194 ctccttgaggatccgcttggatgccat 168
>gb|DR119048.1|DR119048 RTMG1_20_G05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_G05_A029 5', mRNA sequence
Length = 550
Score = 172 bits (87), Expect = 1e-041
Identities = 314/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| |||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 412 gtcttgtacatatgagcaatctgtggtacaagaggatcatctgggtttggatccgtcaac 353
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 352 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 293
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 292 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 233
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 232 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 174
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 173 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 114
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 113 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 54
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 53 ctccttgaggatccgcttggatgccat 27
>gb|DR384396.1|DR384396 RTHG1_2_A10.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_2_A10_A029 3', mRNA sequence
Length = 676
Score = 172 bits (87), Expect = 1e-041
Identities = 302/371 (81%), Gaps = 2/371 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 370 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 311
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 310 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 251
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 250 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 191
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 190 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 132
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 131 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 72
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 71 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 12
Query: 685 ttccttgagga 695
||||||||||
Sbjct: 11 ctccttgagga 1
>gb|DR386687.1|DR386687 RTHG1_16_G02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_16_G02_A029 5', mRNA sequence
Length = 641
Score = 172 bits (87), Expect = 1e-041
Identities = 314/387 (81%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| |||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 506 gtcttgtacatatgagcaatctatggtacaagaggatcatctgggtttggatccgtcaac 447
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 446 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 387
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 386 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 327
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 326 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 268
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 267 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 208
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 207 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 148
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 147 ctccttgaggatccgcttggatgccat 121
>gb|AW042590.1|AW042590 ST23F12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST23F12, mRNA sequence
Length = 599
Score = 167 bits (84), Expect = 9e-040
Identities = 311/384 (80%), Gaps = 2/384 (0%)
Strand = Plus / Minus
Query: 329 ttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagcagg 388
|||||||| |||||||||| || ||||||||||| |||||||| ||||| || | ||
Sbjct: 475 ttgtacatatgagcaatctttggtacaagaggatcatctgggtttggatccgtcaacaaa 416
Query: 389 gagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaaga 448
||||| || || ||||||||||| ||||||||||||||||| |||||||| ||||| |
Sbjct: 415 gagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttcaag 356
Query: 449 atgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaaaa 508
||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||||
Sbjct: 355 atgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtcctaaat 296
Query: 509 gatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa-ac 567
| ||||| || |||||||| || || || || || |||||||| |||| |||||| ||
Sbjct: 295 gcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaatac 237
Query: 568 acctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacatatc 627
||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| ||||||||
Sbjct: 236 accccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacatatc 177
Query: 628 ctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaattc 687
|| | | ||||||||||||||||| || ||||| ||||| || || ||||| || ||
Sbjct: 176 atctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaactc 117
Query: 688 cttgaggatacgttttgatgccat 711
||||||||| || || ||||||||
Sbjct: 116 cttgaggatccgcttggatgccat 93
>gb|AL751220.1|AL751220 AL751220 RS Pinus pinaster cDNA clone RS06D07 similar to
UBIQUITIN-CONJUGATING, mRNA sequence
Length = 644
Score = 167 bits (84), Expect = 9e-040
Identities = 315/388 (81%), Gaps = 3/388 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 515 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 456
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccact-gctcctt 444
| ||||| || || ||||||||||| ||||||||||||||||| ||||||| | |||||
Sbjct: 455 aaagagcatattgagagcaaaaccttggagattgtcaaagcaggactccactggttcctt 396
Query: 445 aagaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctt 504
| |||||||| || || |||||||| |||| || ||||| ||||| || || ||| |
Sbjct: 395 caagatgtcgaggcagatacttccattgttatttatatttgggtggaaaactttagtcct 336
Query: 505 aaaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaa 564
||| | ||||| || |||||||| || || || || || |||||||| |||| |||||
Sbjct: 335 aaacgcgaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaa 277
Query: 565 a-acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaaca 623
| ||||| || ||||| ||||| |||| ||| |||||||| ||||||||||| || ||||
Sbjct: 276 atacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccaatgaaaca 217
Query: 624 tatcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtccttta 683
|||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| |
Sbjct: 216 tatcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttca 157
Query: 684 attccttgaggatacgttttgatgccat 711
| ||||||||||| || || ||||||||
Sbjct: 156 actccttgaggatccgcttggatgccat 129
>gb|BQ700547.1|BQ700547 NXRV108_B05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV108_B05 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 589
Score = 165 bits (83), Expect = 4e-039
Identities = 298/367 (81%), Gaps = 2/367 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 418 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 359
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 358 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 299
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 298 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 239
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 238 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 180
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 179 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 120
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 119 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 60
Query: 685 ttccttg 691
||||||
Sbjct: 59 ctccttg 53
>gb|CX649670.1|CX649670 COLD1_36_F02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_F02_A029 5', mRNA sequence
Length = 646
Score = 161 bits (81), Expect = 6e-038
Identities = 281/345 (81%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 302 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 361
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 362 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 421
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 422 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 481
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 482 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 540
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 541 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 600
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtcctt 669
||| || | | ||||||||||||||||| || ||||| |||||
Sbjct: 601 atcatctgctactggacctgcactgcatgaagtaggaggatcctt 645
>gb|DR090678.1|DR090678 RTAL1_16_E07.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_E07_A029 5', mRNA sequence
Length = 536
Score = 161 bits (81), Expect = 6e-038
Identities = 281/345 (81%), Gaps = 2/345 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 366 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 307
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 306 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 247
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 246 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 187
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 186 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 128
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 127 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 68
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtcctt 669
||| || | | ||||||||||||||||| || ||||| |||||
Sbjct: 67 atcatctgctactggacctgcactgcatgaagtaggaggatcctt 23
>gb|AA556378.1|AA556378 233 Loblolly pine C Pinus taeda cDNA clone 1C11D, mRNA sequence
Length = 641
Score = 157 bits (79), Expect = 9e-037
Identities = 309/384 (80%), Gaps = 2/384 (0%)
Strand = Plus / Minus
Query: 329 ttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagcagg 388
||| |||| |||||||| || || ||||||||||| |||||||| ||||| || | ||
Sbjct: 465 ttgnacatatgagcaatntctggtacaagaggatcatctgggtttggatccgtcaacaaa 406
Query: 389 gagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaaga 448
||||| || || ||||||||||| ||||||||||||||||| |||||||| || || |
Sbjct: 405 gagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttcnttcaag 346
Query: 449 atgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaaaa 508
||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||||
Sbjct: 345 atgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtcctaaat 286
Query: 509 gatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa-ac 567
| ||||| || |||||||| || || || || || |||||||| |||| |||||| ||
Sbjct: 285 gcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaatac 227
Query: 568 acctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacatatc 627
||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| ||||||||
Sbjct: 226 accccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacatatc 167
Query: 628 ctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaattc 687
|| | | ||||||||||||||||| || ||||| ||||| || || ||||| || ||
Sbjct: 166 atctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaactc 107
Query: 688 cttgaggatacgttttgatgccat 711
||||||||| || || ||||||||
Sbjct: 106 cttgaggatccgcttggatgccat 83
>gb|DR024397.1|DR024397 STRS1_64_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_64_E05_A034 5', mRNA sequence
Length = 770
Score = 157 bits (79), Expect = 9e-037
Identities = 276/339 (81%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 135 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 194
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 195 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 254
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 255 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 314
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 315 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 373
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 374 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 433
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagg 663
||| || | | ||||||||||||||||| || |||||
Sbjct: 434 atcatctgctactggacctgcactgcatgaagtaggagg 472
>gb|DR386406.1|DR386406 RTHG1_15_B01.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_B01_A029 3', mRNA sequence
Length = 715
Score = 157 bits (79), Expect = 9e-037
Identities = 312/387 (80%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 416 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 357
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 356 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 297
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || | | |||||||| |||| || ||||| |||| || || ||| ||
Sbjct: 296 aagatgtcaagggagaaacttccattgttatttatatttggggggaaaactttagtccta 237
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 236 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 178
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 177 tacaccccctgcatagggactgtcagaagggcccatgatagttgcctgccagtgaaacat 118
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 117 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 58
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 57 ctccttgaggatccgcttggatgccat 31
>gb|DR386604.1|DR386604 RTHG1_16_G02.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_16_G02_A029 3', mRNA sequence
Length = 726
Score = 155 bits (78), Expect = 4e-036
Identities = 269/330 (81%), Gaps = 2/330 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 332 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 273
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 272 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 213
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 212 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 153
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 152 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 94
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 93 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 34
Query: 625 atcctcaccagcaggacctgcactgcatga 654
||| || | | |||||||||||||||||
Sbjct: 33 atcatctgctactggacctgcactgcatga 4
>gb|AA556376.1|AA556376 231 Loblolly pine C Pinus taeda cDNA clone 1C11B, mRNA sequence
Length = 623
Score = 153 bits (77), Expect = 1e-035
Identities = 311/387 (80%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
|||||| |||| |||||| | || || ||||||||||| |||||||| ||||| || | |
Sbjct: 494 gtcttgnacatatgagcantttctggtacaagaggatcatctgggtttggatccgtcaac 435
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 434 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttctttc 375
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 374 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 315
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 314 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 256
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 255 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 196
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 195 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 136
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 135 ctccttgaggatccgcttggatgccat 109
>gb|BQ655462.1|BQ655462 NXRV094_H06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV094_H06 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 602
Score = 149 bits (75), Expect = 2e-034
Identities = 310/387 (80%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| |||| |||| || || ||||||| |||||||| ||||| || | |
Sbjct: 493 gtcttgtacatatgagnnatctttggtacnngaggatcatctgggtttggatccgtcaac 434
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 433 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 374
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 373 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 314
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 313 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 255
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 254 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 195
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| || | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 194 atcatctgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 135
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 134 ctccttgaggatccgcttggatgccat 108
>gb|DR181306.1|DR181306 RTMNUT1_38_C05.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_C05_A029 3', mRNA sequence
Length = 690
Score = 149 bits (75), Expect = 2e-034
Identities = 248/303 (81%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 325 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 266
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 265 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 206
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 205 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 146
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 145 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 87
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 86 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 27
Query: 625 atc 627
|||
Sbjct: 26 atc 24
>gb|DR069345.1|DR069345 RTDK1_6_D10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_D10_A029 5', mRNA sequence
Length = 667
Score = 147 bits (74), Expect = 9e-034
Identities = 335/422 (79%)
Strand = Plus / Minus
Query: 269 cccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatccgtc 328
||||| ||||| || ||||||||||| | || |||| ||| ||||| | || || ||
Sbjct: 658 cccattgcatacttttgggtccagctcctagcagttgtctcatacttggacctgtcagtt 599
Query: 329 ttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagcagg 388
|||||||||||||||||||| || ||||| ||||| |||||||| |||||||| | || |
Sbjct: 598 ttgtacatgtgagcaatctctggtacaaggggatcatctgggtttggatcagtcaacaag 539
Query: 389 gagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaaga 448
|| || || ||||| | |||||||||||| ||||| ||||| |||||||| ||||| |
Sbjct: 538 gaacaaattgaaagaagaaccttagagatggtcaatgcaggactccactgttccttcaag 479
Query: 449 atgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaaaa 508
|| || || || || || ||||| || || || || ||||| |||| || ||| | |||
Sbjct: 478 atatcaaggcagatactgccattgctgttaatattaggatgatagactttagtcatgaaa 419
Query: 509 gatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaaaca 568
| ||||| || |||||||| || || ||||| || |||||||| |||| | || |||
Sbjct: 418 gcaaccttaggtggcttgaatggataatccggtggaaaatgaattgtcaccagaaacaca 359
Query: 569 cctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacatatcc 628
|| |||||||||||||| |||||||| |||||||| || || |||||||||||||||||
Sbjct: 358 ccaccagcatatggactgtcaggaggtcccatgattgtcgcttgccagtggaacatatca 299
Query: 629 tcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaattcc 688
|| | | || |||||||||||||| || ||||| |||||||| || ||||| | ||||
Sbjct: 298 tctgccaccggtcctgcactgcatgaagtaggaggatccttttggagatccttaagttcc 239
Query: 689 tt 690
||
Sbjct: 238 tt 237
>gb|DR386434.1|DR386434 RTHG1_15_E06.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_15_E06_A029 3', mRNA sequence
Length = 675
Score = 147 bits (74), Expect = 9e-034
Identities = 335/422 (79%)
Strand = Plus / Minus
Query: 269 cccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatccgtc 328
||||| ||||| || ||||||||||| | || |||| ||| ||||| | || || ||
Sbjct: 436 cccattgcatacttttgggtccagctcctagcagttgtctcatacttggacctgtcagtt 377
Query: 329 ttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagcagg 388
|||||||||||||||||||| || ||||| ||||| |||||||| |||||||| | || |
Sbjct: 376 ttgtacatgtgagcaatctctggtacaaggggatcatctgggtttggatcagtcaacaag 317
Query: 389 gagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaaga 448
|| || || ||||| | |||||||||||| ||||| ||||| |||||||| ||||| |
Sbjct: 316 gaacaaattgaaagaagaaccttagagatggtcaatgcaggactccactgttccttcaag 257
Query: 449 atgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaaaa 508
|| || || || || || ||||| || || || || ||||| |||| || ||| | |||
Sbjct: 256 atatcaaggcagatactgccattgctgttaatattaggatgatagactttagtcctgaaa 197
Query: 509 gatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaaaca 568
| ||||| || |||||||| || || || ||||| |||||||| |||| | || |||
Sbjct: 196 gcaaccttaggtggcttgaatggataatcagggggaaaatgaattgtcaccagaaacaca 137
Query: 569 cctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacatatcc 628
|| |||||||||||||| |||||||| |||||||| || || |||||||||||||||||
Sbjct: 136 ccaccagcatatggactgtcaggaggtcccatgattgtcgcttgccagtggaacatatca 77
Query: 629 tcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaattcc 688
|| | | || |||||||||||||| || ||||| |||||||| || ||||| | ||||
Sbjct: 76 tctgccaccggtcctgcactgcatgaagtaggaggatccttttggagatccttaagttcc 17
Query: 689 tt 690
||
Sbjct: 16 tt 15
>gb|AW290470.1|AW290470 NXNV027C08F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027C08 5', mRNA sequence
Length = 376
Score = 143 bits (72), Expect = 1e-032
Identities = 247/303 (81%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| || || || | |
Sbjct: 318 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggntccgtcaac 259
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 258 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 199
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 198 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 139
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 138 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 80
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 79 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 20
Query: 625 atc 627
|||
Sbjct: 19 atc 17
>gb|CD027130.1|CD027130 NXNV027C08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027C08 5' similar to Arabidopsis thaliana sequence
At4g27960 ubiquitin-protein ligase UBC9 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 376
Score = 143 bits (72), Expect = 1e-032
Identities = 247/303 (81%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| || || || | |
Sbjct: 318 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggntccgtcaac 259
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 258 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 199
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 198 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 139
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 138 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 80
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 79 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 20
Query: 625 atc 627
|||
Sbjct: 19 atc 17
>gb|DR015197.1|DR015197 STRS1_2_C01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C01_A034 3', mRNA sequence
Length = 693
Score = 141 bits (71), Expect = 5e-032
Identities = 310/387 (80%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 389 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 330
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 329 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactcccctgttccttc 270
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || | | |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 269 aagatgtcaagggagaaacttccattggtatttatatttgggtggaaaactttagtccta 210
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| || | ||||||
Sbjct: 209 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtc-ccaagaaa 151
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 150 tacaccccctgcatagggactgtcagaagggcccatgatagttgcctgccagtgaaacat 91
Query: 625 atcctcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaa 684
||| | | | ||||||||||||||||| || ||||| ||||| || || ||||| ||
Sbjct: 90 atcaactgctactggacctgcactgcatgaagtaggaggatccttctggagatccttcaa 31
Query: 685 ttccttgaggatacgttttgatgccat 711
||||||||||| || || ||||||||
Sbjct: 30 ctccttgaggatccgcttggatgccat 4
>gb|DR118966.1|DR118966 RTMG1_20_G05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_G05_A029 3', mRNA sequence
Length = 732
Score = 141 bits (71), Expect = 5e-032
Identities = 247/303 (81%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 325 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 266
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 265 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 206
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| ||| || ||||| ||||| || || ||| ||
Sbjct: 205 aagatgtcaaggcagatacttccattgttatgtatatttgggtggaaaactttagtccta 146
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 145 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 87
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacat 624
||||| || ||||| ||||| |||| ||| |||||||| |||||||||||||| |||||
Sbjct: 86 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtgaaacat 27
Query: 625 atc 627
|||
Sbjct: 26 atc 24
>gb|BX253662.1|BX253662 BX253662 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP086E12 similar to UBIQUITIN CONJUGATING
ENZYME E2, mRNA sequence
Length = 460
Score = 139 bits (70), Expect = 2e-031
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 269 cccatggcatatttctgggtccagctgcgggctgttgcctcgtacttaggccgatccgtc 328
||||| ||||| |||||||||||||| | || |||| ||| ||||||| || || ||
Sbjct: 431 cccattgcatacttctgggtccagctcctagcagttgtctcatacttagacctgtcagtt 372
Query: 329 ttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagcagg 388
|||||||||||||||||||| || ||||| ||||| |||||||| |||||||| | || |
Sbjct: 371 ttgtacatgtgagcaatctctggtacaaggggatcatctgggtttggatcagtcaacaag 312
Query: 389 gagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctccttaaga 448
|| || || ||||| | |||||||||||| ||||| ||||| |||||||| ||||| |
Sbjct: 311 gaacaaattgaaagaagaaccttagagatggtcaatgcaggactccactgttccttcaag 252
Query: 449 atgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtcttaaaa 508
|| || || || || || ||||| || ||||| || ||||| | || || ||| | |||
Sbjct: 251 atatcaaggcagatactgccattgctgttgatattaggatgataaactttagtcctgaaa 192
Query: 509 gatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaaaca 568
| ||||| || |||||||| || || || || || |||||||| |||| | || |||
Sbjct: 191 gcaaccttaggtggcttgaatggataatcaggcggaaaatgaattgtcaccagaaacaca 132
Query: 569 cctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaacatatcc 628
|| |||||||||||||| |||||||| ||||| || || || ||||| |||||||||||
Sbjct: 131 ccaccagcatatggactgtcaggaggtcccataattgtcgcttgccaatggaacatatca 72
Query: 629 tcaccagcaggacctgcactgcatgacgttggagggtccttttgcaggtcctttaattcc 688
|| | | || |||||||||||||| || ||||| |||||||| || ||||| | ||||
Sbjct: 71 tctgccaccggtcctgcactgcatgaagtaggaggatccttttggagatccttaagttcc 12
Query: 689 tt 690
||
Sbjct: 11 tt 10
>gb|BF518248.1|BF518248 NXSI_036_G10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_036_G10 5' similar to Arabidopsis thaliana
sequence At1g64230 ubiquitin-conjugating enzyme,
putative see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 507
Score = 139 bits (70), Expect = 2e-031
Identities = 240/294 (81%), Gaps = 2/294 (0%)
Strand = Plus / Minus
Query: 326 gtcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagc 385
||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || | |
Sbjct: 296 gtcttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaac 237
Query: 386 agggagcagatagaaagcaaaaccttagagattgtcaaagcagggctccactgctcctta 445
| ||||| || || ||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 236 aaagagcaaattgagagcaaaaccttggagattgtcaaagcaggactccactgttccttc 177
Query: 446 agaatgtcgagacatatgcttccattactattgatgtttggatggaagaccttcgtctta 505
| ||||| || || || |||||||| |||| || ||||| ||||| || || ||| ||
Sbjct: 176 aagatgtcaaggcagatacttccattgttatttatatttgggtggaaaactttagtccta 117
Query: 506 aaagatacctttggaggcttgaaagggtagtccggggggaaatgaatgttcactaagaaa 565
|| | ||||| || |||||||| || || || || || |||||||| |||| ||||||
Sbjct: 116 aatgcaaccttcgggggcttgaatggataatcaggaggaaaatgaatagtcac-aagaaa 58
Query: 566 -acacctccagcatatggactatcaggaggacccatgatggttgcctgccagtg 618
||||| || ||||| ||||| |||| ||| |||||||| ||||||||||||||
Sbjct: 57 tacaccccctgcatagggactgtcagaaggtcccatgatagttgcctgccagtg 4
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 88,914
Number of Sequences: 355925
Number of extensions: 88914
Number of successful extensions: 24952
Number of sequences better than 0.5: 1377
Number of HSP's better than 0.5 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 21923
Number of HSP's gapped (non-prelim): 2711
length of query: 843
length of database: 217,277,237
effective HSP length: 19
effective length of query: 824
effective length of database: 210,514,662
effective search space: 173464081488
effective search space used: 173464081488
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)