BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.467
(758 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO197358.1|CO197358 GEO1_5_F07.g1_A029 Root gravitropism... 293 5e-078
gb|AW065072.1|AW065072 ST39C07 Pine TriplEx shoot tip libra... 242 2e-062
gb|AW065172.1|AW065172 ST40E09 Pine TriplEx shoot tip libra... 242 2e-062
gb|BF220721.1|BF220721 NXCI_149_G09_F NXCI (Nsf Xylem Compr... 242 2e-062
gb|DN457285.1|DN457285 EST953084 Sequencing ESTs from loblo... 238 3e-061
gb|DT626741.1|DT626741 EST1159817 Sequencing ESTs from lobl... 238 3e-061
gb|BX250798.1|BX250798 BX250798 Pinus pinaster differenciat... 236 1e-060
gb|BX677132.1|BX677132 BX677132 RN Pinus pinaster cDNA clon... 236 1e-060
gb|AW289620.1|AW289620 NXNV003F01F Nsf Xylem Normal wood Ve... 232 2e-059
gb|CD028214.1|CD028214 NXNV003F01 Nsf Xylem Normal wood Ver... 232 2e-059
gb|CN784396.1|CN784396 EST783087 Sequencing ESTs from loblo... 230 7e-059
gb|DR091635.1|DR091635 RTAL1_23_A05.b1_A029 Roots plus adde... 230 7e-059
gb|DT625465.1|DT625465 EST1157389 Sequencing ESTs from lobl... 230 7e-059
gb|CF389752.1|CF389752 RTDR2_5_D09.b1_A021 Loblolly pine ro... 228 3e-058
gb|CF389780.1|CF389780 RTDR2_5_D09.g1_A021 Loblolly pine ro... 228 3e-058
gb|BF777828.1|BF777828 NXSI_076_C08_F NXSI (Nsf Xylem Side ... 216 1e-054
gb|CF385410.1|CF385410 RTDR1_3_F08.g1_A015 Loblolly pine ro... 208 2e-052
gb|CF385277.1|CF385277 RTDR1_3_F08.b1_A015 Loblolly pine ro... 196 9e-049
gb|BG040139.1|BG040139 NXSI_106_G07_F NXSI (Nsf Xylem Side ... 180 5e-044
gb|CF401959.1|CF401959 RTWW1_16_C06.b1_A015 Well-watered lo... 180 5e-044
gb|CV138577.1|CV138577 EST849786 Sequencing ESTs from loblo... 180 5e-044
gb|DT624347.1|DT624347 EST1158622 Sequencing ESTs from lobl... 180 5e-044
gb|AW010420.1|AW010420 ST06F02 Pine TriplEx shoot tip libra... 174 3e-042
gb|AW064884.1|AW064884 ST37A03 Pine TriplEx shoot tip libra... 174 3e-042
gb|AW225787.1|AW225787 ST71G07 Pine TriplEx shoot tip libra... 168 2e-040
gb|AW226258.1|AW226258 ST80C07 Pine TriplEx shoot tip libra... 163 1e-038
gb|BE662587.1|BE662587 ST88/ST88C07 Pine TriplEx shoot tip ... 163 1e-038
gb|BF010654.1|BF010654 NXCI_087_F06_F NXCI (Nsf Xylem Compr... 161 5e-038
gb|AW225739.1|AW225739 ST71C05 Pine TriplEx shoot tip libra... 159 2e-037
gb|BE662379.1|BE662379 ST62/ST62E03 Pine TriplEx shoot tip ... 159 2e-037
gb|BF777480.1|BF777480 NXSI_069_A12_F NXSI (Nsf Xylem Side ... 159 2e-037
gb|CV136856.1|CV136856 EST848065 Sequencing ESTs from loblo... 159 2e-037
gb|CV139215.1|CV139215 EST850424 Sequencing ESTs from loblo... 159 2e-037
gb|DN447165.1|DN447165 EST942964 Sequencing ESTs from loblo... 159 2e-037
gb|DT624351.1|DT624351 EST1158626 Sequencing ESTs from lobl... 159 2e-037
gb|AW697638.1|AW697638 ST64G07 Pine TriplEx shoot tip libra... 157 8e-037
gb|AW011375.1|AW011375 ST20A07 Pine TriplEx shoot tip libra... 151 5e-035
gb|CV143342.1|CV143342 EST854551 Sequencing ESTs from loblo... 151 5e-035
gb|CV144396.1|CV144396 EST855605 Sequencing ESTs from loblo... 151 5e-035
gb|DR092621.1|DR092621 STRR1_2_C09.g1_A033 Stem Response Re... 151 5e-035
gb|DR179115.1|DR179115 RTMNUT1_16_C08.b1_A029 Roots minus m... 151 5e-035
gb|DT624787.1|DT624787 EST1158882 Sequencing ESTs from lobl... 151 5e-035
gb|DT624676.1|DT624676 EST1159011 Sequencing ESTs from lobl... 151 5e-035
gb|BF169853.1|BF169853 NXCI_127_B12_F NXCI (Nsf Xylem Compr... 147 8e-034
gb|BX678643.1|BX678643 BX678643 RS Pinus pinaster cDNA clon... 145 3e-033
gb|BX680729.1|BX680729 BX680729 RS Pinus pinaster cDNA clon... 145 3e-033
gb|CF401407.1|CF401407 RTWW1_12_A04.b1_A015 Well-watered lo... 143 1e-032
gb|CF401684.1|CF401684 RTWW1_14_A10.b1_A015 Well-watered lo... 143 1e-032
gb|CR393585.1|CR393585 CR393585 RN Pinus pinaster cDNA clon... 143 1e-032
gb|CN784242.1|CN784242 EST782933 Sequencing ESTs from loblo... 143 1e-032
gb|DR069155.1|DR069155 RTDK1_5_F04.b1_A029 Roots, dark Pinu... 143 1e-032
gb|DR069228.1|DR069228 RTDK1_5_F04.g1_A029 Roots, dark Pinu... 143 1e-032
gb|DT625675.1|DT625675 EST1157599 Sequencing ESTs from lobl... 143 1e-032
gb|CV134558.1|CV134558 EST845767 Sequencing ESTs from loblo... 141 5e-032
gb|DN451020.1|DN451020 EST946819 Sequencing ESTs from loblo... 141 5e-032
gb|DR069415.1|DR069415 RTDK1_7_D10.b1_A029 Roots, dark Pinu... 141 5e-032
gb|DR069505.1|DR069505 RTDK1_7_D10.g1_A029 Roots, dark Pinu... 141 5e-032
gb|DT625983.1|DT625983 EST1157907 Sequencing ESTs from lobl... 141 5e-032
gb|DT625255.1|DT625255 EST1159530 Sequencing ESTs from lobl... 141 5e-032
gb|BX681371.1|BX681371 BX681371 RS Pinus pinaster cDNA clon... 137 7e-031
gb|AW065136.1|AW065136 ST40B01 Pine TriplEx shoot tip libra... 135 3e-030
gb|CF402000.1|CF402000 RTWW1_16_E09.g1_A015 Well-watered lo... 135 3e-030
gb|CF402634.1|CF402634 RTWW1_21_G01.g1_A015 Well-watered lo... 135 3e-030
gb|BX248920.1|BX248920 BX248920 Pinus pinaster differenciat... 133 1e-029
gb|CV136375.1|CV136375 EST847584 Sequencing ESTs from loblo... 127 7e-028
gb|BE662581.1|BE662581 ST88/ST88B09 Pine TriplEx shoot tip ... 125 3e-027
gb|CF476181.1|CF476181 RTWW2_21_F01.g1_A021 Well-watered lo... 119 2e-025
gb|DR091541.1|DR091541 RTAL1_22_G12.b1_A029 Roots plus adde... 119 2e-025
gb|BM158100.1|BM158100 NXLV_029_D12_F NXLV (Nsf Xylem Late ... 115 3e-024
gb|BF010707.1|BF010707 NXCI_066_E05_F NXCI (Nsf Xylem Compr... 111 4e-023
gb|DR048186.1|DR048186 RTBOR1_7_D09.b2_A029 Roots plus adde... 111 4e-023
gb|DR048270.1|DR048270 RTBOR1_7_D09.g2_A029 Roots plus adde... 111 4e-023
gb|AW056678.1|AW056678 ST54E02 Pine TriplEx shoot tip libra... 109 2e-022
gb|AW010408.1|AW010408 ST06E01 Pine TriplEx shoot tip libra... 107 7e-022
gb|AW042846.1|AW042846 ST26B05 Pine TriplEx shoot tip libra... 107 7e-022
gb|CR392139.1|CR392139 CR392139 RN Pinus pinaster cDNA clon... 105 3e-021
gb|AW290084.1|AW290084 NXNV010B06F Nsf Xylem Normal wood Ve... 103 1e-020
gb|CD026722.1|CD026722 NXNV010B06 Nsf Xylem Normal wood Ver... 103 1e-020
gb|DN464344.1|DN464344 EST960143 Sequencing ESTs from loblo... 101 4e-020
gb|DT627409.1|DT627409 EST1160485 Sequencing ESTs from lobl... 101 4e-020
gb|CF387593.1|CF387593 RTDR1_20_D11.g1_A015 Loblolly pine r... 94 1e-017
gb|AW010703.1|AW010703 ST11B10 Pine TriplEx shoot tip libra... 92 4e-017
gb|BM492470.1|BM492470 NXRV_025_G07_F NXRV (Nsf Xylem Root ... 88 6e-016
gb|CX714755.1|CX714755 RTPQ1_26_H04.b1_A032 Roots treated w... 88 6e-016
gb|AW226318.1|AW226318 ST81A05 Pine TriplEx shoot tip libra... 86 2e-015
gb|CF401454.1|CF401454 RTWW1_12_A04.g1_A015 Well-watered lo... 86 2e-015
gb|BX681637.1|BX681637 BX681637 RS Pinus pinaster cDNA clon... 84 1e-014
gb|CF387455.1|CF387455 RTDR1_20_D11.b1_A015 Loblolly pine r... 80 1e-013
gb|CD025925.1|CD025925 NXSI_087_A04_F NXSI (Nsf Xylem Side ... 78 6e-013
gb|BE662521.1|BE662521 ST87/ST87C04 Pine TriplEx shoot tip ... 76 2e-012
gb|CD020572.1|CD020572 NXNV_080_B05_F Nsf Xylem Normal wood... 76 2e-012
gb|CR394265.1|CR394265 CR394265 RN Pinus pinaster cDNA clon... 76 2e-012
gb|AI812946.1|AI812946 22G3 Pine Lambda Zap Xylem library P... 74 9e-012
gb|AW043062.1|AW043062 ST28H01 Pine TriplEx shoot tip libra... 74 9e-012
gb|AW064900.1|AW064900 ST37B11 Pine TriplEx shoot tip libra... 74 9e-012
gb|AW497822.1|AW497822 PC02F09 Pine TriplEx pollen cone lib... 74 9e-012
gb|AW697547.1|AW697547 ST64C04 Pine TriplEx shoot tip libra... 74 9e-012
gb|AW981727.1|AW981727 PC18A02 Pine TriplEx pollen cone lib... 74 9e-012
gb|BX253787.1|BX253787 BX253787 Pinus pinaster differenciat... 74 9e-012
gb|BE582216.1|BE582216 NXCI_026_E02_F NXCI (Nsf Xylem Compr... 74 9e-012
gb|BE582266.1|BE582266 NXCI_031_B12_F NXCI (Nsf Xylem Compr... 74 9e-012
gb|BE643889.1|BE643889 NXCI_048_F06_F NXCI (Nsf Xylem Compr... 74 9e-012
gb|BE657032.1|BE657032 NXCI_046_F09_F NXCI (Nsf Xylem Compr... 74 9e-012
gb|BF169503.1|BF169503 NXCI_120_C10_F NXCI (Nsf Xylem Compr... 74 9e-012
gb|BF609473.1|BF609473 NXSI_043_A05_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BG039061.1|BG039061 NXSI_092_C07_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BG275404.1|BG275404 NXSI_141_E07_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BQ291206.1|BQ291206 NXRV057_C07_F NXRV (Nsf Xylem Root w... 74 9e-012
gb|BQ701277.1|BQ701277 NXSI_061_F08_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BQ701779.1|BQ701779 NXSI_120_E03_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BQ701931.1|BQ701931 NXSI_122_C11_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BQ702055.1|BQ702055 NXSI_123_H01_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|BQ702790.1|BQ702790 NXSI_132_F10_F NXSI (Nsf Xylem Side ... 74 9e-012
gb|CF392269.1|CF392269 RTDR3_7_E10.b1_A022 Loblolly pine ro... 74 9e-012
gb|CF471224.1|CF471224 RTDS1_2_D02.b1_A015 Drought-stressed... 74 9e-012
gb|CF471329.1|CF471329 RTDS1_2_D02.g1_A015 Drought-stressed... 74 9e-012
gb|CF471440.1|CF471440 RTDS1_3_E02.g1_A015 Drought-stressed... 74 9e-012
gb|CF472315.1|CF472315 RTDS1_9_D11.b1_A015 Drought-stressed... 74 9e-012
gb|CF472451.1|CF472451 RTDS1_9_D11.g1_A015 Drought-stressed... 74 9e-012
gb|CF472570.1|CF472570 RTDS1_10_E06.g1_A015 Drought-stresse... 74 9e-012
gb|CF665152.1|CF665152 RTCNT1_14_F07.b1_A029 Root control P... 74 9e-012
gb|CF665237.1|CF665237 RTCNT1_14_F07.g1_A029 Root control P... 74 9e-012
gb|CF666464.1|CF666464 RTCNT1_23_B03.g1_A029 Root control P... 74 9e-012
gb|CF667040.1|CF667040 RTCNT1_27_G06.g1_A029 Root control P... 74 9e-012
gb|BX680439.1|BX680439 BX680439 RS Pinus pinaster cDNA clon... 74 9e-012
gb|BX682601.1|BX682601 BX682601 Pinus pinaster differenciat... 74 9e-012
gb|BX784371.1|BX784371 BX784371 Pinus pinaster differenciat... 74 9e-012
gb|CR393263.1|CR393263 CR393263 RN Pinus pinaster cDNA clon... 74 9e-012
gb|CN783779.1|CN783779 EST782470 Sequencing ESTs from loblo... 74 9e-012
gb|CN783906.1|CN783906 EST782597 Sequencing ESTs from loblo... 74 9e-012
gb|CN784785.1|CN784785 EST783476 Sequencing ESTs from loblo... 74 9e-012
gb|CN784879.1|CN784879 EST783570 Sequencing ESTs from loblo... 74 9e-012
gb|CN784966.1|CN784966 EST783657 Sequencing ESTs from loblo... 74 9e-012
gb|CN785496.1|CN785496 EST784187 Sequencing ESTs from loblo... 74 9e-012
gb|CN785769.1|CN785769 EST784460 Sequencing ESTs from loblo... 74 9e-012
gb|CO159195.1|CO159195 FLD1_12_C08.b1_A029 Root flooded Pin... 74 9e-012
gb|CO159273.1|CO159273 FLD1_12_C08.g1_A029 Root flooded Pin... 74 9e-012
gb|CO162869.1|CO162869 FLD1_38_B03.b1_A029 Root flooded Pin... 74 9e-012
gb|CO164142.1|CO164142 FLD1_46_C11.b1_A029 Root flooded Pin... 74 9e-012
gb|CO164451.1|CO164451 FLD1_48_C11.b1_A029 Root flooded Pin... 74 9e-012
gb|CO166753.1|CO166753 FLD1_64_F07.b1_A029 Root flooded Pin... 74 9e-012
gb|CO166822.1|CO166822 FLD1_64_F07.g1_A029 Root flooded Pin... 74 9e-012
gb|CO173989.1|CO173989 NDL1_41_A09.b1_A029 Needles control ... 74 9e-012
gb|CO175036.1|CO175036 NDL1_48_A02.b1_A029 Needles control ... 74 9e-012
gb|CO409530.1|CO409530 EST839915 Sequencing ESTs from loblo... 74 9e-012
gb|CO410538.1|CO410538 EST840923 Sequencing ESTs from loblo... 74 9e-012
gb|CO412314.1|CO412314 EST842699 Sequencing ESTs from loblo... 74 9e-012
gb|CO412506.1|CO412506 EST842891 Sequencing ESTs from loblo... 74 9e-012
gb|CO370315.1|CO370315 RTK1_67_C09.b1_A029 Roots minus pota... 74 9e-012
gb|CO370391.1|CO370391 RTK1_67_C09.g1_A029 Roots minus pota... 74 9e-012
gb|CV035798.1|CV035798 RTNACL1_42_B06.g1_A029 Roots plus ad... 74 9e-012
gb|CV134433.1|CV134433 EST845642 Sequencing ESTs from loblo... 74 9e-012
gb|CV134633.1|CV134633 EST845842 Sequencing ESTs from loblo... 74 9e-012
gb|CV135150.1|CV135150 EST846359 Sequencing ESTs from loblo... 74 9e-012
gb|CV135502.1|CV135502 EST846711 Sequencing ESTs from loblo... 74 9e-012
gb|CV136426.1|CV136426 EST847635 Sequencing ESTs from loblo... 74 9e-012
gb|CV137402.1|CV137402 EST848611 Sequencing ESTs from loblo... 74 9e-012
gb|CV137440.1|CV137440 EST848649 Sequencing ESTs from loblo... 74 9e-012
gb|CV137443.1|CV137443 EST848652 Sequencing ESTs from loblo... 74 9e-012
gb|CV137801.1|CV137801 EST849010 Sequencing ESTs from loblo... 74 9e-012
gb|CV137892.1|CV137892 EST849101 Sequencing ESTs from loblo... 74 9e-012
gb|CV138302.1|CV138302 EST849511 Sequencing ESTs from loblo... 74 9e-012
gb|CV138460.1|CV138460 EST849669 Sequencing ESTs from loblo... 74 9e-012
gb|CV138518.1|CV138518 EST849727 Sequencing ESTs from loblo... 74 9e-012
gb|CV138579.1|CV138579 EST849788 Sequencing ESTs from loblo... 74 9e-012
gb|CV138864.1|CV138864 EST850073 Sequencing ESTs from loblo... 74 9e-012
gb|CV138909.1|CV138909 EST850118 Sequencing ESTs from loblo... 74 9e-012
gb|CV138921.1|CV138921 EST850130 Sequencing ESTs from loblo... 74 9e-012
gb|CV139023.1|CV139023 EST850232 Sequencing ESTs from loblo... 74 9e-012
gb|CV139082.1|CV139082 EST850291 Sequencing ESTs from loblo... 74 9e-012
gb|CV143238.1|CV143238 EST854447 Sequencing ESTs from loblo... 74 9e-012
gb|CV143441.1|CV143441 EST854650 Sequencing ESTs from loblo... 74 9e-012
gb|CV144297.1|CV144297 EST855506 Sequencing ESTs from loblo... 74 9e-012
gb|CV144335.1|CV144335 EST855544 Sequencing ESTs from loblo... 74 9e-012
gb|CV144493.1|CV144493 EST855702 Sequencing ESTs from loblo... 74 9e-012
gb|CV144552.1|CV144552 EST855761 Sequencing ESTs from loblo... 74 9e-012
gb|CV144900.1|CV144900 EST856109 Sequencing ESTs from loblo... 74 9e-012
gb|CV145741.1|CV145741 EST856950 Sequencing ESTs from loblo... 74 9e-012
gb|CV146007.1|CV146007 EST857216 Sequencing ESTs from loblo... 74 9e-012
gb|CV146161.1|CV146161 EST857370 Sequencing ESTs from loblo... 74 9e-012
gb|CV146259.1|CV146259 EST857468 Sequencing ESTs from loblo... 74 9e-012
gb|CV146483.1|CV146483 EST857692 Sequencing ESTs from loblo... 74 9e-012
gb|CV146520.1|CV146520 EST857729 Sequencing ESTs from loblo... 74 9e-012
gb|CV147086.1|CV147086 EST858295 Sequencing ESTs from loblo... 74 9e-012
gb|CV147334.1|CV147334 EST858543 Sequencing ESTs from loblo... 74 9e-012
gb|CV147468.1|CV147468 EST858677 Sequencing ESTs from loblo... 74 9e-012
gb|CV147709.1|CV147709 EST858918 Sequencing ESTs from loblo... 74 9e-012
gb|CX650772.1|CX650772 COLD1_48_B04.b1_A029 Root cold Pinus... 74 9e-012
gb|CX651321.1|CX651321 COLD1_51_C07.g1_A029 Root cold Pinus... 74 9e-012
gb|CX714649.1|CX714649 RTPQ1_24_G11.b1_A032 Roots treated w... 74 9e-012
gb|CX714692.1|CX714692 RTPQ1_24_G11.g1_A032 Roots treated w... 74 9e-012
gb|CX715938.1|CX715938 RTPQ1_38_A10.g1_A032 Roots treated w... 74 9e-012
gb|DN445929.1|DN445929 EST941728 Sequencing ESTs from loblo... 74 9e-012
gb|DN446269.1|DN446269 EST942068 Sequencing ESTs from loblo... 74 9e-012
gb|DN446700.1|DN446700 EST942499 Sequencing ESTs from loblo... 74 9e-012
gb|DN447309.1|DN447309 EST943108 Sequencing ESTs from loblo... 74 9e-012
gb|DN448547.1|DN448547 EST944346 Sequencing ESTs from loblo... 74 9e-012
gb|DN448654.1|DN448654 EST944453 Sequencing ESTs from loblo... 74 9e-012
gb|DN448660.1|DN448660 EST944459 Sequencing ESTs from loblo... 74 9e-012
gb|DN448802.1|DN448802 EST944601 Sequencing ESTs from loblo... 74 9e-012
gb|DN450374.1|DN450374 EST946173 Sequencing ESTs from loblo... 74 9e-012
gb|DN450421.1|DN450421 EST946220 Sequencing ESTs from loblo... 74 9e-012
gb|DN450577.1|DN450577 EST946376 Sequencing ESTs from loblo... 74 9e-012
gb|DN450845.1|DN450845 EST946644 Sequencing ESTs from loblo... 74 9e-012
gb|DN452452.1|DN452452 EST948251 Sequencing ESTs from loblo... 74 9e-012
gb|DN452840.1|DN452840 EST948639 Sequencing ESTs from loblo... 74 9e-012
gb|DN453901.1|DN453901 EST949700 Sequencing ESTs from loblo... 74 9e-012
gb|DN454552.1|DN454552 EST950351 Sequencing ESTs from loblo... 74 9e-012
gb|DN455327.1|DN455327 EST951126 Sequencing ESTs from loblo... 74 9e-012
gb|DN455498.1|DN455498 EST951297 Sequencing ESTs from loblo... 74 9e-012
gb|DN455761.1|DN455761 EST951560 Sequencing ESTs from loblo... 74 9e-012
gb|DN455790.1|DN455790 EST951589 Sequencing ESTs from loblo... 74 9e-012
gb|DN456009.1|DN456009 EST951808 Sequencing ESTs from loblo... 74 9e-012
gb|DN456053.1|DN456053 EST951852 Sequencing ESTs from loblo... 74 9e-012
gb|DN456245.1|DN456245 EST952044 Sequencing ESTs from loblo... 74 9e-012
gb|DN456308.1|DN456308 EST952107 Sequencing ESTs from loblo... 74 9e-012
gb|DN457003.1|DN457003 EST952802 Sequencing ESTs from loblo... 74 9e-012
gb|DN457034.1|DN457034 EST952833 Sequencing ESTs from loblo... 74 9e-012
gb|DN457338.1|DN457338 EST953137 Sequencing ESTs from loblo... 74 9e-012
gb|DN457773.1|DN457773 EST953572 Sequencing ESTs from loblo... 74 9e-012
gb|DN457980.1|DN457980 EST953779 Sequencing ESTs from loblo... 74 9e-012
gb|DN457991.1|DN457991 EST953790 Sequencing ESTs from loblo... 74 9e-012
gb|DN458434.1|DN458434 EST954233 Sequencing ESTs from loblo... 74 9e-012
gb|DN459477.1|DN459477 EST955276 Sequencing ESTs from loblo... 74 9e-012
gb|DN459496.1|DN459496 EST955295 Sequencing ESTs from loblo... 74 9e-012
gb|DN459534.1|DN459534 EST955333 Sequencing ESTs from loblo... 74 9e-012
gb|DN460195.1|DN460195 EST955994 Sequencing ESTs from loblo... 74 9e-012
gb|DN460262.1|DN460262 EST956061 Sequencing ESTs from loblo... 74 9e-012
gb|DN460558.1|DN460558 EST956357 Sequencing ESTs from loblo... 74 9e-012
gb|DN460577.1|DN460577 EST956376 Sequencing ESTs from loblo... 74 9e-012
gb|DN461279.1|DN461279 EST957078 Sequencing ESTs from loblo... 74 9e-012
gb|DN461663.1|DN461663 EST957462 Sequencing ESTs from loblo... 74 9e-012
gb|DN461861.1|DN461861 EST957660 Sequencing ESTs from loblo... 74 9e-012
gb|DN462022.1|DN462022 EST957821 Sequencing ESTs from loblo... 74 9e-012
gb|DN462420.1|DN462420 EST958219 Sequencing ESTs from loblo... 74 9e-012
gb|DN462698.1|DN462698 EST958497 Sequencing ESTs from loblo... 74 9e-012
gb|DN463445.1|DN463445 EST959244 Sequencing ESTs from loblo... 74 9e-012
gb|DN463622.1|DN463622 EST959421 Sequencing ESTs from loblo... 74 9e-012
gb|DN463625.1|DN463625 EST959424 Sequencing ESTs from loblo... 74 9e-012
gb|DN463639.1|DN463639 EST959438 Sequencing ESTs from loblo... 74 9e-012
gb|DN463734.1|DN463734 EST959533 Sequencing ESTs from loblo... 74 9e-012
gb|DN464270.1|DN464270 EST960069 Sequencing ESTs from loblo... 74 9e-012
gb|DN464365.1|DN464365 EST960164 Sequencing ESTs from loblo... 74 9e-012
gb|DN465312.1|DN465312 EST961111 Sequencing ESTs from loblo... 74 9e-012
gb|DN633940.1|DN633940 EST984756 Subtracted pine embryo lib... 74 9e-012
gb|DR011500.1|DR011500 HEAT1_6_C11.b1_A029 Root at 37 C for... 74 9e-012
gb|DR011580.1|DR011580 HEAT1_6_C11.g1_A029 Root at 37 C for... 74 9e-012
gb|DR015037.1|DR015037 STRS1_1_D03.b1_A034 Shoot tip pitch ... 74 9e-012
gb|DR019676.1|DR019676 STRS1_31_D11.g1_A034 Shoot tip pitch... 74 9e-012
gb|DR021832.1|DR021832 STRS1_47_E06.b1_A034 Shoot tip pitch... 74 9e-012
gb|DR021917.1|DR021917 STRS1_47_E06.g1_A034 Shoot tip pitch... 74 9e-012
gb|DR050256.1|DR050256 RTBOR1_22_F10.b1_A029 Roots plus add... 74 9e-012
gb|DR050335.1|DR050335 RTBOR1_22_F10.g1_A029 Roots plus add... 74 9e-012
gb|DR056830.1|DR056830 RTCA1_32_G04.g1_A029 Roots minus cal... 74 9e-012
gb|DR068857.1|DR068857 RTDK1_3_G04.b1_A029 Roots, dark Pinu... 74 9e-012
gb|DR068945.1|DR068945 RTDK1_3_G04.g1_A029 Roots, dark Pinu... 74 9e-012
gb|DR092808.1|DR092808 STRR1_4_D04.b1_A033 Stem Response Re... 74 9e-012
gb|DR092879.1|DR092879 STRR1_4_D04.g1_A033 Stem Response Re... 74 9e-012
gb|DR092992.1|DR092992 STRR1_5_H02.b1_A033 Stem Response Re... 74 9e-012
gb|DR093075.1|DR093075 STRR1_5_H02.g1_A033 Stem Response Re... 74 9e-012
gb|DR099177.1|DR099177 STRR1_53_E01.g1_A033 Stem Response R... 74 9e-012
gb|DR102179.1|DR102179 STRR1_79_C11.b1_A033 Stem Response R... 74 9e-012
gb|DR102243.1|DR102243 STRR1_79_C11.g1_A033 Stem Response R... 74 9e-012
gb|DR110890.1|DR110890 RTS1_13_F12.g1_A029 Roots minus sulf... 74 9e-012
gb|DR117398.1|DR117398 RTMG1_6_F01.g1_A029 Roots minus magn... 74 9e-012
gb|DR166057.1|DR166057 RTPHOS1_9_C02.b2_A029 Roots minus ph... 74 9e-012
gb|DR384298.1|DR384298 RTHG1_1_G10.b1_A029 Roots plus added... 74 9e-012
gb|DR384379.1|DR384379 RTHG1_1_G10.g1_A029 Roots plus added... 74 9e-012
gb|DR388613.1|DR388613 RTHG1_29_H07.b1_A029 Roots plus adde... 74 9e-012
gb|DR743325.1|DR743325 RTCU1_15_C11.b1_A029 Roots plus adde... 74 9e-012
gb|DR743398.1|DR743398 RTCU1_15_C11.g1_A029 Roots plus adde... 74 9e-012
gb|DT625195.1|DT625195 EST1159470 Sequencing ESTs from lobl... 74 9e-012
gb|CF476135.1|CF476135 RTWW2_21_F01.b1_A021 Well-watered lo... 72 4e-011
gb|BM428093.1|BM428093 NXRV_008_F07_F NXRV (Nsf Xylem Root ... 70 1e-010
gb|AA556824.1|AA556824 666 Loblolly pine C Pinus taeda cDNA... 68 6e-010
gb|AL750111.1|AL750111 AL750111 AS Pinus pinaster cDNA clon... 68 6e-010
gb|BX681072.1|BX681072 BX681072 RS Pinus pinaster cDNA clon... 68 6e-010
gb|DR012164.1|DR012164 HEAT1_10_D10.g1_A029 Root at 37 C fo... 68 6e-010
gb|DR117313.1|DR117313 RTMG1_6_F01.b1_A029 Roots minus magn... 68 6e-010
gb|DR386755.1|DR386755 RTHG1_17_F06.b1_A029 Roots plus adde... 68 6e-010
gb|DR386840.1|DR386840 RTHG1_17_F06.g1_A029 Roots plus adde... 68 6e-010
gb|DR386922.1|DR386922 RTHG1_18_F06.b1_A029 Roots plus adde... 68 6e-010
gb|CO169153.1|CO169153 NDL1_5_B05.b1_A029 Needles control P... 66 2e-009
gb|DR011383.1|DR011383 HEAT1_5_H08.b1_A029 Root at 37 C for... 66 2e-009
gb|DR166116.1|DR166116 RTPHOS1_9_C02.g2_A029 Roots minus ph... 66 2e-009
gb|AW010416.1|AW010416 ST06E10 Pine TriplEx shoot tip libra... 64 9e-009
gb|BE451994.1|BE451994 NXCI_007_B10_F NXCI (Nsf Xylem Compr... 64 9e-009
gb|CO366585.1|CO366585 RTK1_28_F03.g1_A029 Roots minus pota... 60 1e-007
gb|CX651239.1|CX651239 COLD1_51_C07.b1_A029 Root cold Pinus... 60 1e-007
gb|DN631769.1|DN631769 EST982585 Subtracted pine embryo lib... 60 1e-007
gb|DR011991.1|DR011991 HEAT1_9_G11.b1_A029 Root at 37 C for... 60 1e-007
gb|DT630690.1|DT630690 EST1155102 Subtracted pine embryo li... 60 1e-007
gb|BE662387.1|BE662387 ST62/ST62F06 Pine TriplEx shoot tip ... 56 2e-006
gb|CX647714.1|CX647714 COLD1_19_A09.g1_A029 Root cold Pinus... 56 2e-006
gb|BF517390.1|BF517390 NXSI_013_H12_F NXSI (Nsf Xylem Side ... 54 9e-006
gb|AA739979.1|AA739979 744 PtIFG2 Pinus taeda cDNA clone 91... 52 3e-005
gb|BQ702285.1|BQ702285 NXSI_127_A04_F NXSI (Nsf Xylem Side ... 52 3e-005
gb|CF399383.1|CF399383 RTDS3_28_H04.b1_A022 Drought-stresse... 52 3e-005
gb|CF399469.1|CF399469 RTDS3_28_H04.g1_A022 Drought-stresse... 52 3e-005
gb|CF471022.1|CF471022 RTDS1_16_H02.b1_A015 Drought-stresse... 52 3e-005
gb|CF471895.1|CF471895 RTDS1_7_D06.b1_A015 Drought-stressed... 52 3e-005
gb|CF471916.1|CF471916 RTDS1_7_D06.g1_A015 Drought-stressed... 52 3e-005
gb|CF472936.1|CF472936 RTDS1_12_C12.g1_A015 Drought-stresse... 52 3e-005
gb|CF664694.1|CF664694 RTCNT1_11_H09.b1_A029 Root control P... 52 3e-005
gb|CF664779.1|CF664779 RTCNT1_11_H09.g1_A029 Root control P... 52 3e-005
gb|CO164522.1|CO164522 FLD1_48_C11.g1_A029 Root flooded Pin... 52 3e-005
gb|CO169339.1|CO169339 NDL1_6_H09.b1_A029 Needles control P... 52 3e-005
gb|CO172697.1|CO172697 NDL1_31_G10.b1_A029 Needles control ... 52 3e-005
gb|CO172781.1|CO172781 NDL1_31_G10.g1_A029 Needles control ... 52 3e-005
gb|CO360875.1|CO360875 NDL2_1_E01.b1_A029 Needles control 2... 52 3e-005
gb|CO360958.1|CO360958 NDL2_1_E01.g1_A029 Needles control 2... 52 3e-005
gb|CO363381.1|CO363381 RTK1_9_H12.b1_A029 Roots minus potas... 52 3e-005
gb|CO363471.1|CO363471 RTK1_9_H12.g1_A029 Roots minus potas... 52 3e-005
gb|DR025561.1|DR025561 STRS1_72_H04.b1_A034 Shoot tip pitch... 52 3e-005
gb|DR025642.1|DR025642 STRS1_72_H04.g1_A034 Shoot tip pitch... 52 3e-005
gb|DR058340.1|DR058340 RTNIT1_11_F01.b1_A029 Roots minus ni... 52 3e-005
gb|DR058428.1|DR058428 RTNIT1_11_F01.g1_A029 Roots minus ni... 52 3e-005
gb|DR058784.1|DR058784 RTNIT1_13_G11.g1_A029 Roots minus ni... 52 3e-005
gb|DR072650.1|DR072650 RTDK1_27_E07.g1_A029 Roots, dark Pin... 52 3e-005
gb|DR109586.1|DR109586 RTS1_3_G01.b1_A029 Roots minus sulfu... 52 3e-005
gb|DR118131.1|DR118131 RTMG1_11_G12.b1_A029 Roots minus mag... 52 3e-005
gb|DR118213.1|DR118213 RTMG1_11_G12.g1_A029 Roots minus mag... 52 3e-005
gb|DR165996.1|DR165996 RTPHOS1_8_D07.g1_A029 Roots minus ph... 52 3e-005
gb|DR177381.1|DR177381 RTMNUT1_5_B06.b1_A029 Roots minus mi... 52 3e-005
gb|DR177468.1|DR177468 RTMNUT1_5_B06.g1_A029 Roots minus mi... 52 3e-005
gb|DR745074.1|DR745074 RTCU1_26_G09.g1_A029 Roots plus adde... 52 3e-005
gb|DR745235.1|DR745235 RTCU1_28_A12.b1_A029 Roots plus adde... 52 3e-005
gb|DR745251.1|DR745251 RTCU1_28_C08.b1_A029 Roots plus adde... 52 3e-005
gb|DR745327.1|DR745327 RTCU1_28_C08.g1_A029 Roots plus adde... 52 3e-005
gb|BM157486.1|BM157486 NXLV_020_A03_F NXLV (Nsf Xylem Late ... 50 1e-004
gb|CF669772.1|CF669772 RTCNT1_46_A09.b1_A029 Root control P... 50 1e-004
gb|CF669851.1|CF669851 RTCNT1_46_A09.g1_A029 Root control P... 50 1e-004
gb|CO160167.1|CO160167 FLD1_19_E02.b1_A029 Root flooded Pin... 50 1e-004
gb|CO160239.1|CO160239 FLD1_19_E02.g1_A029 Root flooded Pin... 50 1e-004
gb|CO163557.1|CO163557 FLD1_42_H06.b1_A029 Root flooded Pin... 50 1e-004
gb|CX650466.1|CX650466 COLD1_45_H02.g1_A029 Root cold Pinus... 50 1e-004
gb|DR022331.1|DR022331 STRS1_50_H03.b1_A034 Shoot tip pitch... 50 1e-004
gb|DR022408.1|DR022408 STRS1_50_H03.g1_A034 Shoot tip pitch... 50 1e-004
gb|DR023289.1|DR023289 STRS1_56_D06.g1_A034 Shoot tip pitch... 50 1e-004
gb|DR058000.1|DR058000 RTNIT1_9_C03.b1_A029 Roots minus nit... 50 1e-004
gb|DR058073.1|DR058073 RTNIT1_9_C03.g1_A029 Roots minus nit... 50 1e-004
gb|DR070203.1|DR070203 RTDK1_11_H12.g1_A029 Roots, dark Pin... 50 1e-004
gb|BG276008.1|BG276008 NXSI_147_E01_F NXSI (Nsf Xylem Side ... 48 5e-004
gb|AA739804.1|AA739804 569 PtIFG2 Pinus taeda cDNA clone 89... 46 0.002
gb|AI725085.1|AI725085 984 PtIFG2 Pinus taeda cDNA clone 89... 46 0.002
gb|AI725271.1|AI725271 1137 PtIFG2 Pinus taeda cDNA clone 9... 46 0.002
gb|AI813204.1|AI813204 3B3 Pine Lambda Zap Xylem library Pi... 46 0.002
gb|AW042644.1|AW042644 ST24C09 Pine TriplEx shoot tip libra... 46 0.002
gb|AW290201.1|AW290201 NXNV015C05F Nsf Xylem Normal wood Ve... 46 0.002
gb|AW754871.1|AW754871 PC06E10 Pine TriplEx pollen cone lib... 46 0.002
gb|AL750656.1|AL750656 AL750656 RN Pinus pinaster cDNA clon... 46 0.002
gb|BX253571.1|BX253571 BX253571 Pinus pinaster differenciat... 46 0.002
gb|BE458165.1|BE458165 NXCI_008_D01_F NXCI (Nsf Xylem Compr... 46 0.002
gb|BF609010.1|BF609010 NXSI_039_D02_F NXSI (Nsf Xylem Side ... 46 0.002
gb|BQ106828.1|BQ106828 NXLV089_G10_F NXLV (Nsf Xylem Late w... 46 0.002
gb|BQ107406.1|BQ107406 NXLV091_C11_F NXLV (Nsf Xylem Late w... 46 0.002
gb|BQ699538.1|BQ699538 NXRV123_E11_F NXRV (Nsf Xylem Root w... 46 0.002
gb|BQ702716.1|BQ702716 NXSI_131_G04_F NXSI (Nsf Xylem Side ... 46 0.002
gb|CD026003.1|CD026003 NXSI_094_B05_F NXSI (Nsf Xylem Side ... 46 0.002
gb|CD026844.1|CD026844 NXNV015C05 Nsf Xylem Normal wood Ver... 46 0.002
gb|CF396124.1|CF396124 RTDS2_13_B09.g1_A021 Drought-stresse... 46 0.002
gb|CF470841.1|CF470841 RTDS1_15_D10.b1_A015 Drought-stresse... 46 0.002
gb|CF470956.1|CF470956 RTDS1_15_D10.g1_A015 Drought-stresse... 46 0.002
gb|CF471151.1|CF471151 RTDS1_16_H02.g1_A015 Drought-stresse... 46 0.002
gb|DR071666.1|DR071666 RTDK1_21_H04.b1_A029 Roots, dark Pin... 46 0.002
gb|DR071751.1|DR071751 RTDK1_21_H04.g1_A029 Roots, dark Pin... 46 0.002
gb|DR072572.1|DR072572 RTDK1_27_E07.b1_A029 Roots, dark Pin... 46 0.002
gb|DR077964.1|DR077964 RTFEPL1_1_C06.b1_A029 Roots plus add... 46 0.002
gb|DR078042.1|DR078042 RTFEPL1_1_C06.g1_A029 Roots plus add... 46 0.002
gb|DR169332.1|DR169332 RTPHOS1_31_D09.g1_A029 Roots minus p... 46 0.002
gb|DR745310.1|DR745310 RTCU1_28_A12.g1_A029 Roots plus adde... 46 0.002
emb|AJ306723.1|PPI306723 Pinus pinaster mRNA for putative h... 46 0.002
gb|AW042799.1|AW042799 ST25E08 Pine TriplEx shoot tip libra... 44 0.008
gb|AW985240.1|AW985240 NXNV_132_H01_F Nsf Xylem Normal wood... 42 0.032
gb|BF610393.1|BF610393 NXSI_058_A06_F NXSI (Nsf Xylem Side ... 42 0.032
gb|BG039068.1|BG039068 NXSI_092_D05_F NXSI (Nsf Xylem Side ... 42 0.032
gb|BM428359.1|BM428359 NXRV_012_H05_F NXRV (Nsf Xylem Root ... 42 0.032
gb|BQ106936.1|BQ106936 NXLV083_E08_F NXLV (Nsf Xylem Late w... 42 0.032
gb|CD020842.1|CD020842 NXNV_091_D10_F Nsf Xylem Normal wood... 42 0.032
gb|CD021771.1|CD021771 NXNV_162_B05_F Nsf Xylem Normal wood... 42 0.032
gb|BX680752.1|BX680752 BX680752 RS Pinus pinaster cDNA clon... 42 0.032
>gb|CO197358.1|CO197358 GEO1_5_F07.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_5_F07_A029 5', mRNA sequence
Length = 700
Score = 293 bits (148), Expect = 5e-078
Identities = 304/356 (85%)
Strand = Plus / Minus
Query: 128 ggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgacc 187
|||||||| || |||||||||||||||||||||||||| || ||||| ||||| | |||
Sbjct: 607 ggcaaggccccgaggaagcagctggccaccaaggcggcccggaagtccgcccccaccacc 548
Query: 188 ggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgc 247
|| ||||||||||||||||| |||| ||||| || |||||||| ||||| |||||||||
Sbjct: 547 ggtggagtgaagaagccccatcgttatcgcccgggtaccgtcgccctccgtgagatccgc 488
Query: 248 aagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgt 307
||||| |||||| ||| |||||||| |||||||||||||| ||||||||||| || |
Sbjct: 487 aagtatcagaagtccacagagctgctcatccgcaagctgcccttccagcgccttgtcagg 428
Query: 308 gagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctg 367
|| ||||| |||||||||||||| ||||| |||||||||||| |||||| ||| ||
Sbjct: 427 gaaatcgctcaggacttcaagactgaccttcgcttccagagccacgccgtgctcgccctc 368
Query: 368 caggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccatt 427
|||||||| || ||||| ||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 367 caggaggcctcagaggcatacctcgtcggtctctttgaggacaccaacttgtgcgcaatc 308
Query: 428 cacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccg 483
||||||||||| ||||| || |||||||||||||| ||||||||| | ||||||||
Sbjct: 307 cacgccaagcgggtcacgattatgcccaaggacattcagctcgccaggcgtatccg 252
>gb|AW065072.1|AW065072 ST39C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST39C07, mRNA sequence
Length = 601
Score = 242 bits (122), Expect = 2e-062
Identities = 302/362 (83%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 57 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 116
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || |||||||| |||
Sbjct: 117 ggagtgaagaagccccacaggttcaggcccggtactgtagcccttcgtgagatccgaaag 176
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct: 177 taccagaagagcacagagctgctgataagaaagttgccattccagcgcctggtaagggag 236
Query: 311 atcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcgctgcag 370
|||||||||||||||||||| || | | |||||| || || |||||||| |||||
Sbjct: 237 atcgcccaggacttcaagacagatttgaggttccagtcgtcggcggtcgccgcactgcaa 296
Query: 371 gaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgccattcac 430
|| ||| | ||||| || || || ||||| || |||||||||||||| || ||||||||
Sbjct: 297 gaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgccattcat 356
Query: 431 gccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgtggggag 490
|||||| | ||||||||||||||||| || ||||||||||| ||||| |||||||| |||
Sbjct: 357 gccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgtggagag 416
Query: 491 ag 492
||
Sbjct: 417 ag 418
>gb|AW065172.1|AW065172 ST40E09 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST40E09, mRNA sequence
Length = 588
Score = 242 bits (122), Expect = 2e-062
Identities = 302/362 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || ||||||||||| |||
Sbjct: 109 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgcccccgcg 168
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| ||||| || || || ||||||
Sbjct: 169 acgggaggagtgaagaagcctcacaggttcaggcccggtaccgttgcccttcgtgagatc 228
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||||| || | ||| |||| |||||||||||||||
Sbjct: 229 cgaaagtaccagaagagcacagagctgctcattagaaagttgccattccagcgcctggtg 288
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 289 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtcgccgca 348
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 349 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 408
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 409 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 468
Query: 485 gg 486
||
Sbjct: 469 gg 470
>gb|BF220721.1|BF220721 NXCI_149_G09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_149_G09 5' similar to Arabidopsis
thaliana sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 242 bits (122), Expect = 2e-062
Identities = 306/368 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 87 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 146
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||||||| | ||| | ||||| || || || || || ||||||
Sbjct: 147 acaggaggagtgaagaagccccacaggttcaggcccggtactgttgcccttcgtgagatc 206
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 207 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 266
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 267 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtcgccgca 326
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 327 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 386
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 387 attcatgccaaganngtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 446
Query: 485 ggggagag 492
|| |||||
Sbjct: 447 ggagagag 454
>gb|DN457285.1|DN457285 EST953084 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGY23 5' end, mRNA sequence
Length = 691
Score = 238 bits (120), Expect = 3e-061
Identities = 306/368 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 94 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 153
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 154 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 213
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 214 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 273
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 274 agggagatcgcccaggacttcaagacagatttgaggttccagtcttcagcggtcgccgca 333
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 334 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 393
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 394 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 453
Query: 485 ggggagag 492
|| |||||
Sbjct: 454 ggagagag 461
>gb|DT626741.1|DT626741 EST1159817 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAQ74 5' end, mRNA sequence
Length = 691
Score = 238 bits (120), Expect = 3e-061
Identities = 306/368 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 94 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 153
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 154 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 213
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 214 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 273
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 274 agggagatcgcccaggacttcaagacagatttgaggttccagtcttcagcggtcgccgca 333
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 334 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 393
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 394 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 453
Query: 485 ggggagag 492
|| |||||
Sbjct: 454 ggagagag 461
>gb|BX250798.1|BX250798 BX250798 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041D06, mRNA sequence
Length = 680
Score = 236 bits (119), Expect = 1e-060
Identities = 308/371 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 86 ggcgggaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 145
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 146 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 205
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||| |||| | ||| |||| ||||||||||||||
Sbjct: 206 cgaaagtaccagaagagcacagagctgttgataagaaagttgccattccagcgcctggta 265
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 266 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtcgccgca 325
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 326 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 385
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 386 atccatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgtatccgt 445
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 446 ggagagagggc 456
>gb|BX677132.1|BX677132 BX677132 RN Pinus pinaster cDNA clone RN18B03, mRNA sequence
Length = 567
Score = 236 bits (119), Expect = 1e-060
Identities = 308/371 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 9 ggcgggaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 68
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 69 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 128
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||| |||| | ||| |||| ||||||||||||||
Sbjct: 129 cgaaagtaccagaagagcacagagctgttgataagaaagttgccattccagcgcctggta 188
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 189 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtcgccgca 248
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 249 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 308
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 309 atccatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgtatccgt 368
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 369 ggagagagggc 379
>gb|AW289620.1|AW289620 NXNV003F01F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003F01 5', mRNA sequence
Length = 500
Score = 232 bits (117), Expect = 2e-059
Identities = 300/361 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 96 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 155
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 156 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 215
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 216 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 275
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 276 agggagatcgcccaggacttcaagacagatttgaggttccagtcttcagcggtcgccgca 335
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 336 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 395
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 396 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 455
Query: 485 g 485
|
Sbjct: 456 g 456
>gb|CD028214.1|CD028214 NXNV003F01 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV003F01 5' similar to Arabidopsis thaliana sequence
At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 500
Score = 232 bits (117), Expect = 2e-059
Identities = 300/361 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 96 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 155
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| || || || || || ||||||
Sbjct: 156 acaggaggagtgaagaagcctcacaggttcaggcccggtactgttgcccttcgtgagatc 215
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 216 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 275
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 276 agggagatcgcccaggacttcaagacagatttgaggttccagtcttcagcggtcgccgca 335
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 336 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 395
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 396 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 455
Query: 485 g 485
|
Sbjct: 456 g 456
>gb|CN784396.1|CN784396 EST783087 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAL05 5' end, mRNA sequence
Length = 814
Score = 230 bits (116), Expect = 7e-059
Identities = 335/408 (82%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||||||||||||||| || |||| || || ||||| ||||| || |||||||
Sbjct: 34 gatggcccgcacgaagcagacagcccggaaatctaccggcgggaaggccccgcggaagca 93
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || || ||||| || || |||||||| |||||||| || |||||||||||||| ||
Sbjct: 94 gctagcgacgaaggctgctcggaagtctgctccggcgactggaggagtgaagaagcctca 153
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | |||||||| || || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 154 cagattcaggcccggcactgttgccctccgtgagatccgaaagtaccagaagagcaccga 213
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
|||| |||| | ||||| || |||||||| |||||| | ||||| |||||||| |||||
Sbjct: 214 gctgttgataaggaagcttcctttccagcgtctggtgagggagattgcccaggatttcaa 273
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
|||||| || | || || |||||| || || || || || |||||| | ||||| ||
Sbjct: 274 gaccgatctgaggtttcaatcctccgctgtggctgccctccaagaggcggcggaggcgta 333
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||| || || ||||| || |||||||||||||||||||| ||||||||| | || |||||
Sbjct: 334 cctggtgggtctctttgaagacaccaacctctgcgccatccacgccaagagggtgaccat 393
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
|||||| || || || |||||||||||||| |||||||| ||||||||
Sbjct: 394 catgcctaaagatattcagctcgcccgccgcatccgtggagagagggc 441
>gb|DR091635.1|DR091635 RTAL1_23_A05.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_23_A05_A029 3', mRNA sequence
Length = 733
Score = 230 bits (116), Expect = 7e-059
Identities = 305/368 (82%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||||||||||||| |||| || ||||| || || |||||||| ||||||
Sbjct: 135 ggcggtaaggcgccaaggaagcagttggcaacaaaggcagctcggaagtctgctccggcg 194
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||||||| | ||| | ||||| || || || || || ||||||
Sbjct: 195 acaggaggagtgaagaagccccacaggttcaggcccggtactgttgcccttcgtgagatc 254
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 255 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 314
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||| ||||||||||||||||| || | | |||||| || || ||||||||
Sbjct: 315 agggagattgcccaggacttcaagacagatttgaggttccagtcgtcagcggtcgccgca 374
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 375 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 434
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
||||| |||||| | ||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 435 attcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgcatccgt 494
Query: 485 ggggagag 492
|| |||||
Sbjct: 495 ggagagag 502
>gb|DT625465.1|DT625465 EST1157389 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA027 5' end, mRNA sequence
Length = 881
Score = 230 bits (116), Expect = 7e-059
Identities = 335/408 (82%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||||||||||||||| || |||| || || ||||| ||||| || |||||||
Sbjct: 42 gatggcccgcacgaagcagacagcccggaaatctaccggcgggaaggccccgcggaagca 101
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || || ||||| || || |||||||| |||||||| || |||||||||||||| ||
Sbjct: 102 gctagcgacgaaggctgctcggaagtctgctccggcgactggaggagtgaagaagcctca 161
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | |||||||| || || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 162 cagattcaggcccggcactgttgccctccgtgagatccgaaagtaccagaagagcaccga 221
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
|||| |||| | ||||| || |||||||| |||||| | ||||| |||||||| |||||
Sbjct: 222 gctgttgataaggaagcttcctttccagcgtctggtgagggagattgcccaggatttcaa 281
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
|||||| || | || || |||||| || || || || || |||||| | ||||| ||
Sbjct: 282 gaccgatctgaggtttcaatcctccgctgtggctgccctccaagaggcggcggaggcgta 341
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||| || || ||||| || |||||||||||||||||||| ||||||||| | || |||||
Sbjct: 342 cctggtgggtctctttgaagacaccaacctctgcgccatccacgccaagagggtgaccat 401
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
|||||| || || || |||||||||||||| |||||||| ||||||||
Sbjct: 402 catgcctaaagatattcagctcgcccgccgcatccgtggagagagggc 449
>gb|CF389752.1|CF389752 RTDR2_5_D09.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_D09_A021 3', mRNA
sequence
Length = 540
Score = 228 bits (115), Expect = 3e-058
Identities = 307/371 (82%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || ||||||||||| |||
Sbjct: 87 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgcccccgcg 146
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| ||||| || || || ||||||
Sbjct: 147 acgggaggagtgaagaagcctcacaggttcaggcccggtaccgtggcccttcgtgagatc 206
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||||| || | ||| |||| |||||||||||||||
Sbjct: 207 cgaaagtaccagaagagcacagagctgctaattagaaagttgccattccagcgcctggtg 266
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || || || ||
Sbjct: 267 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtggctgca 326
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 327 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 386
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 387 atccatgccaagagggtcactatcatgcccaaagatatccagctcgctcgccgtatccgt 446
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 447 ggagagagggc 457
>gb|CF389780.1|CF389780 RTDR2_5_D09.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_D09_A021 5', mRNA
sequence
Length = 531
Score = 228 bits (115), Expect = 3e-058
Identities = 307/371 (82%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || ||||||||||| |||
Sbjct: 65 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgcccccgcg 124
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| ||||| || || || ||||||
Sbjct: 125 acgggaggagtgaagaagcctcacaggttcaggcccggtaccgtggcccttcgtgagatc 184
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||||| || | ||| |||| |||||||||||||||
Sbjct: 185 cgaaagtaccagaagagcacagagctgctaattagaaagttgccattccagcgcctggtg 244
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||||||||||||||||||||| || | | |||||| || || || || ||
Sbjct: 245 agggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtggctgca 304
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || ||||| || |||||||||||||| || |||
Sbjct: 305 ctgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctgtgtgcc 364
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 365 atccatgccaagagggtcactatcatgcccaaagatatccagctcgctcgccgtatccgt 424
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 425 ggagagagggc 435
>gb|BF777828.1|BF777828 NXSI_076_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_076_C08 5' similar to Arabidopsis thaliana
sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 426
Score = 216 bits (109), Expect = 1e-054
Identities = 319/390 (81%)
Strand = Plus / Plus
Query: 94 ccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcagctggc 153
||||||||||||||| || |||| || || ||||| ||||| || |||||||||| ||
Sbjct: 1 ccgcacgaagcagacagcccggaaatctaccggcgggaaggccccgcggaagcagctagc 60
Query: 154 caccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccaccgttt 213
|| ||||| || || ||||||||||||||||| || |||||||||||||| ||| | ||
Sbjct: 61 gacgaaggctgctcggaagtctgccccggcgactggaggagtgaagaagcctcacagatt 120
Query: 214 ccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggagctgct 273
| | |||||||| || || ||||| |||||||| ||||||||||||||||| |||||| |
Sbjct: 121 caggcccggcactgttgccctccgtgagatccgaaagtaccagaagagcaccgagctgtt 180
Query: 274 gatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaagaccga 333
||| | ||||| || |||||||| |||||| | ||||| |||||||| |||||||||||
Sbjct: 181 gataaggaagcttcctttccagcgtctggtgagggagattgcccaggatttcaagaccga 240
Query: 334 cctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctcgt 393
|| | || || |||||| || || || || || |||||| | ||||| ||||| ||
Sbjct: 241 tctgaggtttcaatcctccgctgtggctgccctccaagaggcggcggaggcgtacctggt 300
Query: 394 cgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgcc 453
|| ||||| || |||||||||||||||||||| ||||||||| || |||||||||||
Sbjct: 301 gggtctctttgaagacaccaacctctgcgccatccacgccaagnnngtgaccatcatgcc 360
Query: 454 caaggacatccagctcgcccgccgtatccg 483
||| || || |||||||||||||| |||||
Sbjct: 361 caaagatattcagctcgcccgccgcatccg 390
>gb|CF385410.1|CF385410 RTDR1_3_F08.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_3_F08_A015 5', mRNA
sequence
Length = 600
Score = 208 bits (105), Expect = 2e-052
Identities = 291/353 (82%)
Strand = Plus / Plus
Query: 116 aagtccactggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtct 175
|||||||| || |||||||| || | |||||||| ||| ||||||| || ||||||
Sbjct: 17 aagtccaccggtggcaaggctcctcgcaagcagcttgcctccaaggctgcccgcaagagc 76
Query: 176 gccccggcgaccggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctc 235
|||||| | ||||| || || |||||||| ||||| | | ||||| |||||||| |||
Sbjct: 77 gccccgtctaccggtggcgtcaagaagcctcaccgctacaagcccggtaccgtcgctctc 136
Query: 236 cgggagatccgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccag 295
|| |||||||| ||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 137 cgtgagatccgtcgctaccagaagtcgactgagctcctgatccgcaagctgcccttccag 196
Query: 296 cgcctggtgcgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgcc 355
|||||||| |||||||| ||||||||||||||| | || |||||||||||| || |||
Sbjct: 197 cgcctggttcgtgagattgcccaggacttcaagtctgatctccgcttccagtcgtctgcc 256
Query: 356 gtcgccgcgctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaac 415
||| ||| || |||||| || |||| ||||||||||| |||||||||||||||||||
Sbjct: 257 atcggcgccctccaggagtcggtcgagtcctacctcgtctcgctcttcgaggacaccaac 316
Query: 416 ctctgcgccattcacgccaagcgcgtcaccatcatgcccaaggacatccagct 468
|| |||||||| ||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 317 ctgtgcgccatccacgccaagcgcgtcacgatccagtccaaggacatccagct 369
>gb|CF385277.1|CF385277 RTDR1_3_F08.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_3_F08_A015 3', mRNA
sequence
Length = 503
Score = 196 bits (99), Expect = 9e-049
Identities = 213/251 (84%)
Strand = Plus / Plus
Query: 218 cccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggagctgctgatc 277
||||| |||||||| ||||| |||||||| ||||||||| || ||||| ||||||
Sbjct: 34 cccggtaccgtcgctctccgtgagatccgtcgctaccagaagtcgactgagctcctgatc 93
Query: 278 cgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaagaccgacctc 337
||||||||||| |||||||||||||| |||||||| ||||||||||||||| | || |||
Sbjct: 94 cgcaagctgcccttccagcgcctggttcgtgagattgcccaggacttcaagtctgatctc 153
Query: 338 cgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctacctcgtcggg 397
||||||||| || ||| ||| ||| || |||||| || |||| ||||||||||| |
Sbjct: 154 cgcttccagtcgtctgccatcggcgccctccaggagtcggtcgagtcctacctcgtctcg 213
Query: 398 ctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgcccaag 457
|||||||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||
Sbjct: 214 ctcttcgaggacaccaacctgtgcgccatccacgccaagcgcgtcacgatccagtccaag 273
Query: 458 gacatccagct 468
|||||||||||
Sbjct: 274 gacatccagct 284
>gb|BG040139.1|BG040139 NXSI_106_G07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_G07 5' similar to Arabidopsis thaliana
sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 551
Score = 180 bits (91), Expect = 5e-044
Identities = 301/371 (81%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 68 ggcgggaaggcgccgaggaagcagctggcaaccaaggctgcgcggaaatctgccccggca 127
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | || || ||||| || || || || |||
Sbjct: 128 acgggaggagtgaagaagcctcacagattcaggcctggtaccgttgcccttcgtgaaatc 187
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||
Sbjct: 188 cgaaagtaccagaagagcaccgagctgctgataaggaagctgccattccagcgcttggtc 247
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||| || |||||||||||||| || | | || ||| || || ||||| ||
Sbjct: 248 agggagattgctcaggacttcaagacggatttgaggtttcagtcatcagcagtcgctgct 307
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || || ||||||||||| || ||||| || ||
Sbjct: 308 ctgcaagaagcggcggaggcatatctggttggtctcttcgaggatactaacctgtgtgca 367
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 368 atccatgccaagagggtgaccatcatgcccaaggacattcagctcgctcgccgcatccgt 427
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 428 ggagagagggc 438
>gb|CF401959.1|CF401959 RTWW1_16_C06.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_C06_A015 3', mRNA sequence
Length = 541
Score = 180 bits (91), Expect = 5e-044
Identities = 301/371 (81%)
Strand = Plus / Minus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 475 ggcggaaaggcgccgaggaagcagctggcaaccaaggctgcgcggaaatctgccccggca 416
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | || || ||||| || || || || |||
Sbjct: 415 acgggaggagtgaagaagcctcacagattcaggcctggtaccgttgcccttcgtgaaatc 356
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||
Sbjct: 355 cgaaagtaccagaagagcaccgagctgctgataaggaagctgccattccagcgcttggtc 296
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||| || |||||||||||||| || | | || ||| || || ||||| ||
Sbjct: 295 agggagattgctcaggacttcaagacggatttgaggtttcagtcatcagcagtcgctgct 236
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || || ||||||||||| || ||||| || ||
Sbjct: 235 ctgcaagaagcggcggaggcatatctggttggtctcttcgaggatactaacctgtgtgca 176
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | || |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 175 atccatgccaagagggtgaccatcatgcccaaggacattcagctcgctcgccgcatccgt 116
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 115 ggagagagggc 105
>gb|CV138577.1|CV138577 EST849786 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB481 5' end, mRNA sequence
Length = 733
Score = 180 bits (91), Expect = 5e-044
Identities = 301/371 (81%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 54 ggcgggaaggcgccgaggaagcagctggcaaccaaggctgcgcggaaatctgccccggca 113
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | || || ||||| || || || || |||
Sbjct: 114 acgggaggagtgaagaagcctcacagattcaggcctggtaccgttgcccttcgtgaaatc 173
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||||| || ||||||||| ||||
Sbjct: 174 cgaaagtaccagaagagcaccgagctgctgataaggaagctaccattccagcgcttggtc 233
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||| || |||||||||||||| || | | || ||| || || ||||| ||
Sbjct: 234 agggagattgctcaggacttcaagacggatttgaggtttcagtcatcagcagtcgctgct 293
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || || ||||||||||| || ||||| || ||
Sbjct: 294 ctgcaagaagcggcggaggcatatctggttggtctcttcgaggatactaacctgtgtgca 353
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 354 atccatgccaagagggtcaccatcatgcccaaggacattcagctcgctcgccgcatccgt 413
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 414 ggagagagggc 424
>gb|DT624347.1|DT624347 EST1158622 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD64 5' end, mRNA sequence
Length = 735
Score = 180 bits (91), Expect = 5e-044
Identities = 301/371 (81%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 54 ggcgggaaggcgccgaggaagcagctggcaaccaaggctgcgcggaaatctgccccggca 113
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | || || ||||| || || || || |||
Sbjct: 114 acgggaggagtgaagaagcctcacagattcaggcctggtaccgttgcccttcgtgaaatc 173
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||||| || ||||||||| ||||
Sbjct: 174 cgaaagtaccagaagagcaccgagctgctgataaggaagctaccattccagcgcttggtc 233
Query: 305 cgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtcgccgcg 364
| ||||| || |||||||||||||| || | | || ||| || || ||||| ||
Sbjct: 234 agggagattgctcaggacttcaagacggatttgaggtttcagtcatcagcagtcgctgct 293
Query: 365 ctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctctgcgcc 424
||||| || ||| | ||||| || || || || ||||||||||| || ||||| || ||
Sbjct: 294 ctgcaagaagcggcggaggcatatctggttggtctcttcgaggatactaacctgtgtgca 353
Query: 425 attcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgtatccgt 484
|| || |||||| | ||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 354 atccatgccaagagggtcaccatcatgcccaaggacattcagctcgctcgccgcatccgt 413
Query: 485 ggggagagggc 495
|| ||||||||
Sbjct: 414 ggagagagggc 424
>gb|AW010420.1|AW010420 ST06F02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST06F02, mRNA sequence
Length = 715
Score = 174 bits (88), Expect = 3e-042
Identities = 172/200 (86%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 184 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 243
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || |||||||| |||
Sbjct: 244 ggagtgaagaagccccacaggttcaggcccggtactgtagcccttcgtgagatccgaaag 303
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct: 304 taccagaagagcacagagctgctgataagaaagttgccattccagcgcctggtaagggag 363
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||||||||
Sbjct: 364 atcgcccaggacttcaagac 383
Score = 91.7 bits (46), Expect = 4e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 395 gggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgccc 454
||||| || |||||||||||||| || | |||||| |||||| | |||||||||||||||
Sbjct: 452 gggctgtttgaggacaccaacctgtgtgncattcatgccaagagggtcaccatcatgccc 511
Query: 455 aaggacatccagctcgcccgccgtatccgtggggaga 491
|| || ||||||||||| ||||| |||||||| ||||
Sbjct: 512 aaagatatccagctcgctcgccgcatccgtggagaga 548
>gb|AW064884.1|AW064884 ST37A03 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST37A03, mRNA sequence
Length = 466
Score = 174 bits (88), Expect = 3e-042
Identities = 172/200 (86%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 115 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 174
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || |||||||| |||
Sbjct: 175 ggagtgaagaagccccacaggttcaggcccggtactgtagcccttcgtgagatccgaaag 234
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct: 235 taccagaagagcacagagctgctgataagaaagttgccattccagcgcctggtaagggag 294
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||||||||
Sbjct: 295 atcgcccaggacttcaagac 314
>gb|AW225787.1|AW225787 ST71G07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST71G07, mRNA sequence
Length = 432
Score = 168 bits (85), Expect = 2e-040
Identities = 171/200 (85%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 109 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 168
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || |||||||| |||
Sbjct: 169 ggagtgaagaagccccacaggttcaggcccggtactgtagcccttcgtgagatccgaaag 228
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct: 229 taccagaagagcacagagctgctgataagaaagttgccattccagcgcctggtaagggag 288
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||| ||||
Sbjct: 289 atcgcccaggacttcnagac 308
>gb|AW226258.1|AW226258 ST80C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST80C07, mRNA sequence
Length = 352
Score = 163 bits (82), Expect = 1e-038
Identities = 169/198 (85%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || ||||||||||| |||
Sbjct: 109 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgcccccgcg 168
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| ||||| || || || ||||||
Sbjct: 169 acgggaggagtgaagaagcctcacaggttcaggcccggtaccgttgcccttcgtgagatc 228
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||||| || | ||| |||| |||||||||||||||
Sbjct: 229 cgaaagtaccagaagagcacagagctgctcattagaaagttgccattccagcgcctggtg 288
Query: 305 cgtgagatcgcccaggac 322
| |||||||||||||||
Sbjct: 289 agggagatcgcccaggac 306
>gb|BE662587.1|BE662587 ST88/ST88C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST88/ST88C07, mRNA sequence
Length = 465
Score = 163 bits (82), Expect = 1e-038
Identities = 211/254 (83%)
Strand = Plus / Plus
Query: 239 gagatccgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgc 298
|||||||| ||||||||||||||||| ||||||| || | ||| |||| |||||||||
Sbjct: 10 gagatccgaaagtaccagaagagcacagagctgcacattagaaagttgccattccagcgc 69
Query: 299 ctggtgcgtgagatcgcccaggacttcaagaccgacctccgcttccagagctccgccgtc 358
|||||| | ||||||||||||||||||||||| || | | |||||| || || |||
Sbjct: 70 ctggtgagggagatcgcccaggacttcaagacagatttgaggttccagtcgtcagcggtc 129
Query: 359 gccgcgctgcaggaggcgtccgaggcctacctcgtcgggctcttcgaggacaccaacctc 418
||||| ||||| || ||| | ||||| || || || ||||| || ||||||||||||||
Sbjct: 130 gccgcactgcaagaagcggcggaggcatatctggttgggctgtttgaggacaccaacctg 189
Query: 419 tgcgccattcacgccaagcgcgtcaccatcatgcccaaggacatccagctcgcccgccgt 478
|| |||||||| |||||| | ||||||||||||||||| || ||||||||||| |||||
Sbjct: 190 tgtgccattcatgccaagagggtcaccatcatgcccaaagatatccagctcgctcgccgc 249
Query: 479 atccgtggggagag 492
|||||||| |||||
Sbjct: 250 atccgtggagagag 263
>gb|BF010654.1|BF010654 NXCI_087_F06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_087_F06 5' similar to Arabidopsis
thaliana sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 388
Score = 161 bits (81), Expect = 5e-038
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| ||||||
Sbjct: 87 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcg 146
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||||||| | ||| | ||||| || || || || || ||||
Sbjct: 147 acaggaggagtgaagaagccccacaggttcaggcccggtactgttgcccttcgtgagann 206
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | ||| |||| ||||||||||||||
Sbjct: 207 cgaaagtaccagaagagcacagagctgctgataagaaagttgccattccagcgcctggta 266
Query: 305 cgtgagatcgcccaggacttcaagac 330
| |||| ||||||||||||||||||
Sbjct: 267 agggagancgcccaggacttcaagac 292
>gb|AW225739.1|AW225739 ST71C05 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST71C05, mRNA sequence
Length = 386
Score = 159 bits (80), Expect = 2e-037
Identities = 174/206 (84%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| ||||||||||||||||||||||| || ||||| || || |||||||| || |||
Sbjct: 112 ggcggtaaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctcccgcg 171
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | ||||| ||||| || || || ||||||
Sbjct: 172 acgggaggagtgaagaagcctcacaggttcaggcccggtaccgtggcccttcgtgagatc 231
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| |||||||| || ||| |||| |||||||||||||||
Sbjct: 232 cgaaagtaccagaagagcacagagctgctaattnnaaagttgccattccagcgcctggtg 291
Query: 305 cgtgagatcgcccaggacttcaagac 330
| |||||||||||||||||| ||||
Sbjct: 292 agggagatcgcccaggacttcgagac 317
>gb|BE662379.1|BE662379 ST62/ST62E03 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST62/ST62E03, mRNA sequence
Length = 457
Score = 159 bits (80), Expect = 2e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 115 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 174
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || ||||| || |||
Sbjct: 175 ggagtgaagaagccccacaggttcaggcccggtactgttgcccttcgtgagatacgaaag 234
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| ||||||||| |||| | |||
Sbjct: 235 taccagaagagcacagagctgctgataagaaagttgccattccagcgcttggtaagggag 294
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||||||||
Sbjct: 295 atcgcccaggacttcaagac 314
Score = 54.0 bits (27), Expect = 9e-006
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 404 gaggacaccaacctctgcgccattcacgccaagcgcgtcaccatcatgcccaaggacatc 463
|||||||||||||| || |||||||| ||| | | |||||||||||||||| || |||
Sbjct: 388 gaggacaccaacctgtgtgccattcatgccnngaggntcaccatcatgcccaaagatatc 447
Query: 464 cagc 467
||||
Sbjct: 448 cagc 451
>gb|BF777480.1|BF777480 NXSI_069_A12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_069_A12 5' similar to Arabidopsis thaliana
sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 312
Score = 159 bits (80), Expect = 2e-037
Identities = 170/200 (85%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 39 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 98
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || ||||| || |||
Sbjct: 99 ggagtgaagaagccccacaggttcaggcccggtactgttgcccttcgtgagatacgaaag 158
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| ||||||||| |||| | |||
Sbjct: 159 taccagaagagcacagagctgctgataagaaagttgccattccagcgcttggtaagggag 218
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||||||||
Sbjct: 219 atcgcccaggacttcaagac 238
>gb|CV136856.1|CV136856 EST848065 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAH13 5' end, mRNA sequence
Length = 812
Score = 159 bits (80), Expect = 2e-037
Identities = 326/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || | ||||| ||||| || ||||| ||| |||||||
Sbjct: 46 gatggcccgaacaaagcagactgcccgtaagtcaactggaggaaaggctccacggaagca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || ||||| || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactgcaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|CV139215.1|CV139215 EST850424 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBD52 5' end, mRNA sequence
Length = 718
Score = 159 bits (80), Expect = 2e-037
Identities = 326/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || ||||||| ||||| || ||||| ||| |||||||
Sbjct: 23 gatggcccgaacaaagcagactgcccggaagtcaactggaggaaaggctccacggaagca 82
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 83 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 142
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 143 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 202
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 203 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 262
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| | || || ||
Sbjct: 263 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggcggaagcata 322
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 323 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 382
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 383 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 430
>gb|DN447165.1|DN447165 EST942964 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBP86 5' end, mRNA sequence
Length = 789
Score = 159 bits (80), Expect = 2e-037
Identities = 326/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || | ||||| ||||| || ||||| ||| |||||||
Sbjct: 46 gatggcccgaacaaagcagactgcccgtaagtcaactggaggaaaggctccacggaagca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || ||||| || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactgcaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|DT624351.1|DT624351 EST1158626 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD68 5' end, mRNA sequence
Length = 789
Score = 159 bits (80), Expect = 2e-037
Identities = 326/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || | ||||| ||||| || ||||| ||| |||||||
Sbjct: 46 gatggcccgaacaaagcagactgcccgtaagtcaactggaggaaaggctccacggaagca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || ||||| || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactgcaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|AW697638.1|AW697638 ST64G07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST64G07, mRNA sequence
Length = 390
Score = 157 bits (79), Expect = 8e-037
Identities = 169/200 (84%)
Strand = Plus / Plus
Query: 131 aaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcgaccggc 190
||||||||||||||||||||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 118 aaggcgccaaggaagcagctggcaacaaaggcagctcggaagtctgctccggcgacagga 177
Query: 191 ggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatccgcaag 250
|||||||||||||||||| | ||| | ||||| || || || || || |||| || |||
Sbjct: 178 ggagtgaagaagccccacaggttcaggcccggtactgtagcccttcgtgaganncgaaag 237
Query: 251 taccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtgcgtgag 310
|||||||||||||| ||||||||||| | ||| |||| |||||||||||||| | |||
Sbjct: 238 taccagaagagcacagagctgctgataagaaagttgccattccagcgcctggtaagggag 297
Query: 311 atcgcccaggacttcaagac 330
||||||||||||||| ||||
Sbjct: 298 atcgcccaggacttcnagac 317
>gb|AW011375.1|AW011375 ST20A07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST20A07, mRNA sequence
Length = 599
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || ||||| || || |||||||| ||||| ||
Sbjct: 83 gatggcccgaacgaagcagactgcccgtaaatccaccggtgggaaggcgccgaggaaaca 142
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || |||||||| ||| | || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 143 gctcgcaaccaaggctgcgaggaaatctgcaccggcgacgggcggagtgaagaagcctca 202
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || || || || || ||||| |||||||| || || ||||||||||||||
Sbjct: 203 cagattcaggccaggtactgttgccctccgtgagatccgaaaatatcagaagagcacgga 262
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||| | |||||||| |||||||| || || | || || || |||||||||||
Sbjct: 263 gcttttgataaggaagctgcccttccagcgtctcgttagagaaattgctcaggacttcaa 322
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| || || | |||||| ||| ||||| || || ||||| || ||| | ||||| ||
Sbjct: 323 gacggatctgaggttccagtcctctgccgtggcggctctgcaagaagcggcggaggcata 382
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||||| || |||||||||||||| ||||| |||||||| || || ||| | ||||| ||
Sbjct: 383 tctcgttggtctcttcgaggacactaacctgtgcgccatacatgcgaagagggtcactat 442
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
|||||||| || || ||||| || ||||| || ||||| ||||||||
Sbjct: 443 tatgcccaaagatattcagctggcacgccgcattcgtggagagagggc 490
>gb|CV143342.1|CV143342 EST854551 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICR76 5' end, mRNA sequence
Length = 909
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || ||||||| ||||| || ||||| ||| |||| ||
Sbjct: 46 gatggcccgaacaaagcagactgcccggaagtcaactggaggaaaggctccacggaaaca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|CV144396.1|CV144396 EST855605 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID509 5' end, mRNA sequence
Length = 912
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || ||||||| ||||| || ||||| ||| |||| ||
Sbjct: 46 gatggcccgaacaaagcagactgcccggaagtcaactggaggaaaggctccacggaaaca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|DR092621.1|DR092621 STRR1_2_C09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_2_C09_A033 5', mRNA sequence
Length = 867
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || | ||||| ||||| || ||||| ||| |||||||
Sbjct: 29 gatggcccgaacaaagcagactgcccgtaagtcaactggaggaaaggccccacggaagca 88
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| ||||| |||||||| ||
Sbjct: 89 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtcaagaagcctca 148
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 149 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 208
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 209 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 268
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| |||| || ||
Sbjct: 269 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggccgaagcata 328
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 329 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 388
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 389 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 436
>gb|DR179115.1|DR179115 RTMNUT1_16_C08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_C08_A029 3', mRNA sequence
Length = 705
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Minus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || || || || || |||||||| | |||||
Sbjct: 592 gatggcccgaacgaagcagactgctcgtaaatcaacaggtgggaaggcgcctcgcaagca 533
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| || |||||||| | |||||||| |||||||| |||||||| |||||||| ||
Sbjct: 532 gctggcaacgaaggcggccaggaagtctgcaccggcgactggcggagtaaagaagcctca 473
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
||| ||| | |||||||| || || || ||||||||||| ||||||||||||||||| ||
Sbjct: 472 ccgattcaggcccggcactgttgctcttcgggagatccgaaagtaccagaagagcactga 413
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| || || | |||||||| |||||||| || || | ||||| |||||||| |||||
Sbjct: 412 gcttcttataagaaagctgcccttccagcggcttgtaagagagattgcccaggatttcaa 353
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||| || || | || |||| || ||| | ||||| ||
Sbjct: 352 gacggacttgagattccagtcctcagcggtttcagcattgcaagaagcggcagaggcata 293
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| ||||| || |||||||| || ||||| ||||| |||||||| || | || || ||
Sbjct: 292 tcttgtcggactgttcgaggatactaacctgtgcgcaattcacgcaaaaagggttactat 233
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || || |||||||| ||||| |||||||| ||||||||
Sbjct: 232 catgcccaaagatattcagctcgctcgccgcatccgtggagagagggc 185
>gb|DT624787.1|DT624787 EST1158882 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAG43 5' end, mRNA sequence
Length = 910
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || ||||||| ||||| || ||||| ||| |||| ||
Sbjct: 46 gatggcccgaacaaagcagactgcccggaagtcaactggaggaaaggctccacggaaaca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|DT624676.1|DT624676 EST1159011 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAH87 5' end, mRNA sequence
Length = 910
Score = 151 bits (76), Expect = 5e-035
Identities = 325/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| || |||||||| || ||||||| ||||| || ||||| ||| |||| ||
Sbjct: 46 gatggcccgaacaaagcagactgcccggaagtcaactggaggaaaggctccacggaaaca 105
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| |||||||| || | |||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 106 gctggcgaccaaggcagccaggaagtctgcaccggcaaccggtggagtgaagaagcctca 165
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || ||||| || || || || || ||||| || |||||||||||||| ||
Sbjct: 166 caggttcaggcctggcactgttgctcttcgtgaaatccgaaaataccagaagagcaccga 225
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| ||||| | |||||||| |||||| | || || | ||||| |||||||| |||||
Sbjct: 226 gcttctgataagaaagctgcccttccagaggctcgtaagggagattgcccaggatttcaa 285
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||||| || || || || || || ||| | || || ||
Sbjct: 286 gacggacttgaggttccagtcgtccgcggtggcggcactacaagaagcggcggaagcata 345
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| || ||||| ||||||||||||||||| |||||||| ||||| ||| | || |||||
Sbjct: 346 tcttgttgggctgttcgaggacaccaacctgtgcgccatccacgcgaagagggtgaccat 405
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || |||||||| || ||||| || ||||| ||||||||
Sbjct: 406 catgcccaaagatatccagcttgctcgccgcattcgtggagagagggc 453
>gb|BF169853.1|BF169853 NXCI_127_B12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_127_B12 5' similar to Arabidopsis
thaliana sequence At5g65360 histone H3 (sp|P05203) see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 443
Score = 147 bits (74), Expect = 8e-034
Identities = 173/206 (83%)
Strand = Plus / Plus
Query: 125 ggcggcaaggcgccaaggaagcagctggccaccaaggcggcgcgcaagtctgccccggcg 184
||||| |||||||| |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 61 ggcgggaaggcgccgaggaagcagctggcaaccaaggctgcgcggaaatctgccccggca 120
Query: 185 accggcggagtgaagaagccccaccgtttccgccccggcaccgtcgcgctccgggagatc 244
|| || |||||||||||||| ||| | ||| | || || ||||| || || || || |||
Sbjct: 121 acgggaggagtgaagaagcctcacagattcaggcctggtaccgttgcccttcgtgaaatc 180
Query: 245 cgcaagtaccagaagagcacggagctgctgatccgcaagctgccgttccagcgcctggtg 304
|| ||||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||
Sbjct: 181 cgaaagtaccagaagagcaccgagctgctgataaggaagctgccattccagcgcttggtc 240
Query: 305 cgtgagatcgcccaggacttcaagac 330
| ||||| || ||||||||||||||
Sbjct: 241 agggagattgctcaggacttcaagac 266
Score = 46.1 bits (23), Expect = 0.002
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 443 accatcatgcccaaggacatccagctcgcccgccgtatccg 483
|||||||||||||||||||| || |||| ||||| |||||
Sbjct: 379 accatcatgcccaaggacattcanntcgctcgccgcatccg 419
>gb|BX678643.1|BX678643 BX678643 RS Pinus pinaster cDNA clone RS12E02, mRNA sequence
Length = 513
Score = 145 bits (73), Expect = 3e-033
Identities = 310/389 (79%)
Strand = Plus / Plus
Query: 89 atggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcag 148
||||| ||||| |||||||| || | ||||||||||| |||||||| || | ||||||
Sbjct: 85 atggctcgcactaagcagaccgcccgaaagtccactggtggcaaggcccctcgcaagcag 144
Query: 149 ctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccac 208
|| || ||||||| || |||||||| ||||| | ||||| || || |||||||| |||
Sbjct: 145 ctcgcttccaaggccgcccgcaagtccgccccctctaccggaggtgtcaagaagcctcac 204
Query: 209 cgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggag 268
|| | || || |||||||| ||||| ||||| || ||||||||| || |||
Sbjct: 205 cgctataagcctggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgag 264
Query: 269 ctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaag 328
|| || ||||| ||||| || |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 265 ctcctcatccgaaagctccccttccagcgtctggttcgtgagattgcccaggacttcaag 324
Query: 329 accgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctac 388
| || |||||||||||| || ||| ||| || || |||||| | ||| |||||
Sbjct: 325 tctgatctccgcttccagtcttctgccatcggtgctctccaggagtccgttgagtcctac 384
Query: 389 ctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatc 448
|||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 385 ctcgtctccctcttcgaggacaccaacctctgcgccatccatgccaagcgtgtcaccatc 444
Query: 449 atgcccaaggacatccagctcgcccgccg 477
|||||||||||||||||||||||||
Sbjct: 445 caatccaaggacatccagctcgcccgccg 473
>gb|BX680729.1|BX680729 BX680729 RS Pinus pinaster cDNA clone RS47G04, mRNA sequence
Length = 681
Score = 145 bits (73), Expect = 3e-033
Identities = 310/389 (79%)
Strand = Plus / Plus
Query: 89 atggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagcag 148
||||| ||||| |||||||| || | ||||||||||| |||||||| || | ||||||
Sbjct: 85 atggctcgcactaagcagaccgcccgaaagtccactggtggcaaggcccctcgcaagcag 144
Query: 149 ctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagccccac 208
|| || ||||||| || |||||||| ||||| | ||||| || || |||||||| |||
Sbjct: 145 ctcgcttccaaggccgcccgcaagtccgccccctctaccggaggtgtcaagaagcctcac 204
Query: 209 cgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacggag 268
|| | || || |||||||| ||||| ||||| || ||||||||| || |||
Sbjct: 205 cgctataagcctggtaccgtcgctctccgtgagattcgacgataccagaagtcgaccgag 264
Query: 269 ctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaag 328
|| || ||||| ||||| || |||||||| ||||| |||||||| |||||||||||||||
Sbjct: 265 ctcctcatccgaaagctccccttccagcgtctggttcgtgagattgcccaggacttcaag 324
Query: 329 accgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggcctac 388
| || |||||||||||| || ||| ||| || || |||||| | ||| |||||
Sbjct: 325 tctgatctccgcttccagtcttctgccatcggtgctctccaggagtccgttgagtcctac 384
Query: 389 ctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccatc 448
|||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 385 ctcgtctccctcttcgaggacaccaacctctgcgccatccatgccaagcgtgtcaccatc 444
Query: 449 atgcccaaggacatccagctcgcccgccg 477
|||||||||||||||||||||||||
Sbjct: 445 caatccaaggacatccagctcgcccgccg 473
>gb|CF401407.1|CF401407 RTWW1_12_A04.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_12_A04_A015 3', mRNA sequence
Length = 490
Score = 143 bits (72), Expect = 1e-032
Identities = 324/408 (79%)
Strand = Plus / Minus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || || || || || |||||||| | |||||
Sbjct: 439 gatggcccgaacgaagcagactgctcgtaaatcaacaggtgggaaggcgcctcgcaagca 380
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
|||||| || |||||||| | |||||||| |||||||| ||||| || |||||||| ||
Sbjct: 379 gctggcaacgaaggcggccaggaagtctgcaccggcgactggcggtgtaaagaagcctca 320
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
||| ||| | |||||||| || || || ||||||||||| ||||||||||||||||| ||
Sbjct: 319 ccgattcaggcccggcactgttgctcttcgggagatccgaaagtaccagaagagcactga 260
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| || || | |||||||| |||||||| || || | ||||| |||||||| |||||
Sbjct: 259 gcttcttataagaaagctgcccttccagcggcttgtaagagagattgcccaggatttcaa 200
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| ||| | | |||||| ||| || || | || |||| || ||| | ||||| ||
Sbjct: 199 gacggacttgagattccagtcctcagcggtttcagcattgcaagaagcggcagaggcata 140
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
|| ||||| || |||||||| || ||||| ||||| |||||||| || | || || ||
Sbjct: 139 tcttgtcggactgttcgaggatactaacctgtgcgcaattcacgcaaaaagggttactat 80
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||||||| || || |||||||| ||||| |||||||| ||||||||
Sbjct: 79 catgcccaaagatattcagctcgctcgccgcatccgtggagagagggc 32
>gb|CF401684.1|CF401684 RTWW1_14_A10.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_A10_A015 3', mRNA sequence
Length = 647
Score = 143 bits (72), Expect = 1e-032
Identities = 324/408 (79%)
Strand = Plus / Minus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || ||||| || || |||||||| ||||| ||
Sbjct: 601 gatggcccgaacgaagcagactgcccgtaaatccaccggtgggaaggcgccgaggaaaca 542
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || |||||||| ||| | || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 541 gctcgcaaccaaggctgcgaggaaatctgcaccggcgacgggcggagtgaagaagcctca 482
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || || || || || ||||| |||||||| || || ||||||||||||||
Sbjct: 481 cagattcaggccgggtactgttgccctccgtgagatccgaaaatatcagaagagcacgga 422
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||| | |||||||| |||||||| || || | || || || |||||||||||
Sbjct: 421 gcttttgataaggaagctgcccttccagcgtctcgttagagaaattgctcaggacttcaa 362
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| || || | |||||| ||| ||||| || || ||||| || ||| | ||||| ||
Sbjct: 361 gacggatctaaggttccagtcctctgccgtggcggctctgcaagaagcggcggaggcata 302
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||||| || |||||||| ||||| ||||| |||||||| || || ||| | ||||| ||
Sbjct: 301 tctcgtgggtctcttcgaagacactaacctgtgcgccatacatgcgaagagggtcactat 242
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
|||||||| || || ||||| || ||||| || ||||| ||||||||
Sbjct: 241 tatgcccaaagatattcagctggctcgccgcattcgtggagagagggc 194
>gb|CR393585.1|CR393585 CR393585 RN Pinus pinaster cDNA clone RN62B01, mRNA sequence
Length = 522
Score = 143 bits (72), Expect = 1e-032
Identities = 324/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || ||||| || || |||||||| ||||| ||
Sbjct: 61 gatggcccgaacgaagcagactgcccgtaaatccaccggtgggaaggcgccgaggaaaca 120
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || |||||||| ||| | || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 121 gctcgcaaccaaggctgcgaggaaatctgcaccggcgacgggcggagtgaagaagcctca 180
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || || || || || ||||| |||||||| || || ||||||||||||||
Sbjct: 181 cagattcaggccgggtactgttgccctccgtgagatccgaaaatatcagaagagcacgga 240
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||| | |||||||| |||||||| || || | || || || |||||||||||
Sbjct: 241 gcttttgataaggaagctgcccttccagcgtctcgttagagaaattgctcaggacttcaa 300
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| || || | |||||| ||| ||||| || || ||||| || ||| | ||||| ||
Sbjct: 301 gacggatctgaggttccagtcctctgccgtggcggctctgcaagaagcggcggaggcata 360
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||||| || |||||||||||||| ||||| |||||||| || || ||| | || || ||
Sbjct: 361 tctcgtgggtctcttcgaggacactaacctgtgcgccatacatgcgaagagggtgactat 420
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
|||||||| || || ||||| || ||||| || ||||| ||||||||
Sbjct: 421 tatgcccaaagatattcagctggctcgccgcattcgtggagagagggc 468
>gb|CN784242.1|CN784242 EST782933 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAJ08 5' end, mRNA sequence
Length = 814
Score = 143 bits (72), Expect = 1e-032
Identities = 324/408 (79%)
Strand = Plus / Plus
Query: 88 gatggcccgcacgaagcagacggcgaggaagtccactggcggcaaggcgccaaggaagca 147
||||||||| ||||||||||| || | || ||||| || || |||||||| ||||| ||
Sbjct: 63 gatggcccgaacgaagcagactgcccgtaaatccaccggtgggaaggcgccgaggaaaca 122
Query: 148 gctggccaccaaggcggcgcgcaagtctgccccggcgaccggcggagtgaagaagcccca 207
||| || |||||||| ||| | || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 123 gctcgcaaccaaggctgcgaggaaatctgcaccggcgacgggcggagtgaagaagcctca 182
Query: 208 ccgtttccgccccggcaccgtcgcgctccgggagatccgcaagtaccagaagagcacgga 267
| | ||| | || || || || || ||||| |||||||| || || ||||||||||||||
Sbjct: 183 cagattcaggccaggtactgttgccctccgtgagatccgaaaatatcagaagagcacgga 242
Query: 268 gctgctgatccgcaagctgccgttccagcgcctggtgcgtgagatcgcccaggacttcaa 327
||| |||| | |||||||| |||||||| || || | || || || |||||||||||
Sbjct: 243 gcttttgataaggaagctgcccttccagcgtctcgttagagaaattgctcaggacttcaa 302
Query: 328 gaccgacctccgcttccagagctccgccgtcgccgcgctgcaggaggcgtccgaggccta 387
||| || || | |||||| ||| ||||| || || ||||| || ||| | ||||| ||
Sbjct: 303 gacggatctgaggttccagtcctctgccgtggcggctctgcaagaagcggcggaggcata 362
Query: 388 cctcgtcgggctcttcgaggacaccaacctctgcgccattcacgccaagcgcgtcaccat 447
||||| || |||||||||||||| ||||| |||||||| || || ||| | ||||| ||
Sbjct: 363 tctcgttggtctcttcgaggacactaacctgtgcgccatacatgcgaagagggtcactat 422
Query: 448 catgcccaaggacatccagctcgcccgccgtatccgtggggagagggc 495
||||| || || || ||||| || ||||| || ||||| ||||||||
Sbjct: 423 tatgccgaaagatattcagctggcacgccgcattcgtggagagagggc 470
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 71,189
Number of Sequences: 355925
Number of extensions: 71189
Number of successful extensions: 19714
Number of sequences better than 0.5: 381
Number of HSP's better than 0.5 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18749
Number of HSP's gapped (non-prelim): 839
length of query: 758
length of database: 217,277,237
effective HSP length: 19
effective length of query: 739
effective length of database: 210,514,662
effective search space: 155570335218
effective search space used: 155570335218
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)