BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.444
(1020 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN626421.1|DN626421 EST977237 Subtracted pine embryo lib... 46 0.003
gb|DN626605.1|DN626605 EST977421 Subtracted pine embryo lib... 46 0.003
gb|DN626618.1|DN626618 EST977434 Subtracted pine embryo lib... 46 0.003
gb|DN626775.1|DN626775 EST977591 Subtracted pine embryo lib... 46 0.003
gb|DN626911.1|DN626911 EST977727 Subtracted pine embryo lib... 46 0.003
gb|DN626927.1|DN626927 EST977743 Subtracted pine embryo lib... 46 0.003
gb|DN627125.1|DN627125 EST977941 Subtracted pine embryo lib... 46 0.003
gb|DN627146.1|DN627146 EST977962 Subtracted pine embryo lib... 46 0.003
gb|DN627253.1|DN627253 EST978069 Subtracted pine embryo lib... 46 0.003
gb|DN627263.1|DN627263 EST978079 Subtracted pine embryo lib... 46 0.003
gb|DN627361.1|DN627361 EST978177 Subtracted pine embryo lib... 46 0.003
gb|DN627369.1|DN627369 EST978185 Subtracted pine embryo lib... 46 0.003
gb|DN627475.1|DN627475 EST978291 Subtracted pine embryo lib... 46 0.003
gb|DN627660.1|DN627660 EST978476 Subtracted pine embryo lib... 46 0.003
gb|DN627913.1|DN627913 EST978729 Subtracted pine embryo lib... 46 0.003
gb|DN627981.1|DN627981 EST978797 Subtracted pine embryo lib... 46 0.003
gb|DN627986.1|DN627986 EST978802 Subtracted pine embryo lib... 46 0.003
gb|DN628047.1|DN628047 EST978863 Subtracted pine embryo lib... 46 0.003
gb|DN628606.1|DN628606 EST979422 Subtracted pine embryo lib... 46 0.003
gb|DN628990.1|DN628990 EST979806 Subtracted pine embryo lib... 46 0.003
gb|DN629159.1|DN629159 EST979975 Subtracted pine embryo lib... 46 0.003
gb|DN629340.1|DN629340 EST980156 Subtracted pine embryo lib... 46 0.003
gb|DN629354.1|DN629354 EST980170 Subtracted pine embryo lib... 46 0.003
gb|DN629438.1|DN629438 EST980254 Subtracted pine embryo lib... 46 0.003
gb|DN629470.1|DN629470 EST980286 Subtracted pine embryo lib... 46 0.003
gb|DN629535.1|DN629535 EST980351 Subtracted pine embryo lib... 46 0.003
gb|DN629920.1|DN629920 EST980736 Subtracted pine embryo lib... 46 0.003
gb|DN630403.1|DN630403 EST981219 Subtracted pine embryo lib... 46 0.003
gb|DN630488.1|DN630488 EST981304 Subtracted pine embryo lib... 46 0.003
gb|DN630735.1|DN630735 EST981551 Subtracted pine embryo lib... 46 0.003
gb|DN630803.1|DN630803 EST981619 Subtracted pine embryo lib... 46 0.003
gb|DN631289.1|DN631289 EST982105 Subtracted pine embryo lib... 46 0.003
gb|DN631305.1|DN631305 EST982121 Subtracted pine embryo lib... 46 0.003
gb|DN631330.1|DN631330 EST982146 Subtracted pine embryo lib... 46 0.003
gb|DN631342.1|DN631342 EST982158 Subtracted pine embryo lib... 46 0.003
gb|DN631415.1|DN631415 EST982231 Subtracted pine embryo lib... 46 0.003
gb|DN631856.1|DN631856 EST982672 Subtracted pine embryo lib... 46 0.003
gb|DN631909.1|DN631909 EST982725 Subtracted pine embryo lib... 46 0.003
gb|DN631920.1|DN631920 EST982736 Subtracted pine embryo lib... 46 0.003
gb|DN632120.1|DN632120 EST982936 Subtracted pine embryo lib... 46 0.003
gb|DN632312.1|DN632312 EST983128 Subtracted pine embryo lib... 46 0.003
gb|DN632326.1|DN632326 EST983142 Subtracted pine embryo lib... 46 0.003
gb|DN632373.1|DN632373 EST983189 Subtracted pine embryo lib... 46 0.003
gb|DN632439.1|DN632439 EST983255 Subtracted pine embryo lib... 46 0.003
gb|DN632870.1|DN632870 EST983686 Subtracted pine embryo lib... 46 0.003
gb|DN633150.1|DN633150 EST983966 Subtracted pine embryo lib... 46 0.003
gb|DN633215.1|DN633215 EST984031 Subtracted pine embryo lib... 46 0.003
gb|DN633245.1|DN633245 EST984061 Subtracted pine embryo lib... 46 0.003
gb|DN633305.1|DN633305 EST984121 Subtracted pine embryo lib... 46 0.003
gb|DN633747.1|DN633747 EST984563 Subtracted pine embryo lib... 46 0.003
gb|DN634059.1|DN634059 EST984875 Subtracted pine embryo lib... 46 0.003
gb|DR160034.1|DR160034 RTFE1_3_G02.b1_A029 Roots minus iron... 46 0.003
gb|DR160111.1|DR160111 RTFE1_3_G02.g1_A029 Roots minus iron... 46 0.003
gb|DT630476.1|DT630476 EST1154888 Subtracted pine embryo li... 46 0.003
gb|DN627287.1|DN627287 EST978103 Subtracted pine embryo lib... 44 0.011
gb|DN628165.1|DN628165 EST978981 Subtracted pine embryo lib... 44 0.011
gb|DN633737.1|DN633737 EST984553 Subtracted pine embryo lib... 44 0.011
gb|AL750881.1|AL750881 AL750881 RS Pinus pinaster cDNA clon... 42 0.044
gb|BX249637.1|BX249637 BX249637 Pinus pinaster differenciat... 42 0.044
gb|BX252829.1|BX252829 BX252829 Pinus pinaster differenciat... 42 0.044
gb|BF777968.1|BF777968 NXSI_079_D08_F NXSI (Nsf Xylem Side ... 42 0.044
gb|DN626758.1|DN626758 EST977574 Subtracted pine embryo lib... 42 0.044
gb|DN627006.1|DN627006 EST977822 Subtracted pine embryo lib... 42 0.044
gb|DN627010.1|DN627010 EST977826 Subtracted pine embryo lib... 42 0.044
gb|DN627185.1|DN627185 EST978001 Subtracted pine embryo lib... 42 0.044
gb|DN627272.1|DN627272 EST978088 Subtracted pine embryo lib... 42 0.044
gb|DN627587.1|DN627587 EST978403 Subtracted pine embryo lib... 42 0.044
gb|DN627840.1|DN627840 EST978656 Subtracted pine embryo lib... 42 0.044
gb|DN628170.1|DN628170 EST978986 Subtracted pine embryo lib... 42 0.044
gb|DN628401.1|DN628401 EST979217 Subtracted pine embryo lib... 42 0.044
gb|DN629539.1|DN629539 EST980355 Subtracted pine embryo lib... 42 0.044
gb|DN629744.1|DN629744 EST980560 Subtracted pine embryo lib... 42 0.044
gb|DN629833.1|DN629833 EST980649 Subtracted pine embryo lib... 42 0.044
gb|DN629863.1|DN629863 EST980679 Subtracted pine embryo lib... 42 0.044
gb|DN630219.1|DN630219 EST981035 Subtracted pine embryo lib... 42 0.044
gb|DN630299.1|DN630299 EST981115 Subtracted pine embryo lib... 42 0.044
gb|DN630654.1|DN630654 EST981470 Subtracted pine embryo lib... 42 0.044
gb|DN630787.1|DN630787 EST981603 Subtracted pine embryo lib... 42 0.044
gb|DN630885.1|DN630885 EST981701 Subtracted pine embryo lib... 42 0.044
gb|DN631766.1|DN631766 EST982582 Subtracted pine embryo lib... 42 0.044
gb|DN632015.1|DN632015 EST982831 Subtracted pine embryo lib... 42 0.044
gb|DN632236.1|DN632236 EST983052 Subtracted pine embryo lib... 42 0.044
gb|DN632420.1|DN632420 EST983236 Subtracted pine embryo lib... 42 0.044
gb|DN632684.1|DN632684 EST983500 Subtracted pine embryo lib... 42 0.044
gb|DN633136.1|DN633136 EST983952 Subtracted pine embryo lib... 42 0.044
gb|DN633382.1|DN633382 EST984198 Subtracted pine embryo lib... 42 0.044
gb|DN633804.1|DN633804 EST984620 Subtracted pine embryo lib... 42 0.044
gb|DT630070.1|DT630070 EST1154482 Subtracted pine embryo li... 42 0.044
>gb|DN626421.1|DN626421 EST977237 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA225, mRNA sequence
Length = 629
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN626605.1|DN626605 EST977421 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA522, mRNA sequence
Length = 629
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN626618.1|DN626618 EST977434 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA536, mRNA sequence
Length = 612
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN626775.1|DN626775 EST977591 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA777, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 403 acgcccacgcccacgcccacgcc 425
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 399 gcccacgcccacgcccacgcc 419
>gb|DN626911.1|DN626911 EST977727 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAB10, mRNA sequence
Length = 619
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 232 acgcccacgcccacgcccacgcc 210
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 236 gcccacgcccacgcccacgcc 216
>gb|DN626927.1|DN626927 EST977743 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAB45, mRNA sequence
Length = 608
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 214 acgcccacgcccacgcccacgcc 192
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 218 gcccacgcccacgcccacgcc 198
>gb|DN627125.1|DN627125 EST977941 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAE67, mRNA sequence
Length = 636
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN627146.1|DN627146 EST977962 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAF03, mRNA sequence
Length = 671
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 450 acgcccacgcccacgcccacgcc 472
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 446 gcccacgcccacgcccacgcc 466
>gb|DN627253.1|DN627253 EST978069 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAG63, mRNA sequence
Length = 606
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 214 acgcccacgcccacgcccacgcc 192
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 218 gcccacgcccacgcccacgcc 198
>gb|DN627263.1|DN627263 EST978079 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAG81, mRNA sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN627361.1|DN627361 EST978177 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAI49, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 214 acgcccacgcccacgcccacgcc 192
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 218 gcccacgcccacgcccacgcc 198
>gb|DN627369.1|DN627369 EST978185 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAI61, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 403 acgcccacgcccacgcccacgcc 425
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 399 gcccacgcccacgcccacgcc 419
>gb|DN627475.1|DN627475 EST978291 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAK55, mRNA sequence
Length = 313
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN627660.1|DN627660 EST978476 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAN47, mRNA sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 93 acgcccacgcccacgcccacgcc 71
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 97 gcccacgcccacgcccacgcc 77
>gb|DN627913.1|DN627913 EST978729 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAR59, mRNA sequence
Length = 554
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 232 acgcccacgcccacgcccacgcc 210
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 236 gcccacgcccacgcccacgcc 216
>gb|DN627981.1|DN627981 EST978797 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAS58, mRNA sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 93 acgcccacgcccacgcccacgcc 71
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 97 gcccacgcccacgcccacgcc 77
>gb|DN627986.1|DN627986 EST978802 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAS67, mRNA sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN628047.1|DN628047 EST978863 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAT59, mRNA sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN628606.1|DN628606 EST979422 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAB203, mRNA sequence
Length = 260
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 218 acgcccacgcccacgcccacgcc 196
>gb|DN628990.1|DN628990 EST979806 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAB774, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN629159.1|DN629159 EST979975 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABA37, mRNA sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN629340.1|DN629340 EST980156 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABD31, mRNA sequence
Length = 671
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 450 acgcccacgcccacgcccacgcc 472
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 446 gcccacgcccacgcccacgcc 466
>gb|DN629354.1|DN629354 EST980170 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABD51, mRNA sequence
Length = 538
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN629438.1|DN629438 EST980254 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABE79, mRNA sequence
Length = 671
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 450 acgcccacgcccacgcccacgcc 472
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 446 gcccacgcccacgcccacgcc 466
>gb|DN629470.1|DN629470 EST980286 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABF34, mRNA sequence
Length = 584
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN629535.1|DN629535 EST980351 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABG29, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN629920.1|DN629920 EST980736 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABM35, mRNA sequence
Length = 627
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 232 acgcccacgcccacgcccacgcc 210
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 236 gcccacgcccacgcccacgcc 216
>gb|DN630403.1|DN630403 EST981219 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABT87, mRNA sequence
Length = 607
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN630488.1|DN630488 EST981304 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABV24, mRNA sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN630735.1|DN630735 EST981551 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABY83, mRNA sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 93 acgcccacgcccacgcccacgcc 71
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 97 gcccacgcccacgcccacgcc 77
>gb|DN630803.1|DN630803 EST981619 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABZ81, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN631289.1|DN631289 EST982105 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC739, mRNA sequence
Length = 612
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 214 acgcccacgcccacgcccacgcc 192
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 218 gcccacgcccacgcccacgcc 198
>gb|DN631305.1|DN631305 EST982121 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC762, mRNA sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 93 acgcccacgcccacgcccacgcc 71
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 97 gcccacgcccacgcccacgcc 77
>gb|DN631330.1|DN631330 EST982146 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC801, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN631342.1|DN631342 EST982158 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC818, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN631415.1|DN631415 EST982231 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC933, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN631856.1|DN631856 EST982672 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACG20, mRNA sequence
Length = 610
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN631909.1|DN631909 EST982725 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACH02, mRNA sequence
Length = 634
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN631920.1|DN631920 EST982736 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACH15, mRNA sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN632120.1|DN632120 EST982936 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACK08, mRNA sequence
Length = 615
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
>gb|DN632312.1|DN632312 EST983128 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACN06, mRNA sequence
Length = 629
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 232 acgcccacgcccacgcccacgcc 210
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 236 gcccacgcccacgcccacgcc 216
>gb|DN632326.1|DN632326 EST983142 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACN24, mRNA sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN632373.1|DN632373 EST983189 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACN96, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 217 acgcccacgcccacgcccacgcc 195
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 221 gcccacgcccacgcccacgcc 201
>gb|DN632439.1|DN632439 EST983255 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACP10, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN632870.1|DN632870 EST983686 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACW37, mRNA sequence
Length = 616
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 403 acgcccacgcccacgcccacgcc 425
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 399 gcccacgcccacgcccacgcc 419
>gb|DN633150.1|DN633150 EST983966 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD063, mRNA sequence
Length = 629
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
>gb|DN633215.1|DN633215 EST984031 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD166, mRNA sequence
Length = 603
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN633245.1|DN633245 EST984061 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD216, mRNA sequence
Length = 610
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 216 acgcccacgcccacgcccacgcc 194
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 220 gcccacgcccacgcccacgcc 200
>gb|DN633305.1|DN633305 EST984121 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD313, mRNA sequence
Length = 554
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 232 acgcccacgcccacgcccacgcc 210
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 236 gcccacgcccacgcccacgcc 216
>gb|DN633747.1|DN633747 EST984563 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADB33, mRNA sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 398 acgcccacgcccacgcccacgcc 420
Score = 42.1 bits (21), Expect = 0.044
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 gcccacgcccacgcccacgcc 412
|||||||||||||||||||||
Sbjct: 394 gcccacgcccacgcccacgcc 414
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,096
Number of Sequences: 355925
Number of extensions: 86096
Number of successful extensions: 22564
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22082
Number of HSP's gapped (non-prelim): 389
length of query: 1020
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1001
effective length of database: 210,514,662
effective search space: 210725176662
effective search space used: 210725176662
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)