BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.405
(1589 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side ... 167 2e-039
gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root w... 167 2e-039
gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root w... 167 2e-039
gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed... 167 2e-039
gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered lob... 167 2e-039
gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciat... 167 2e-039
gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pin... 167 2e-039
gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pin... 167 2e-039
gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pin... 167 2e-039
gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblo... 167 2e-039
gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblo... 167 2e-039
gb|DN457452.1|DN457452 EST953251 Sequencing ESTs from loblo... 167 2e-039
gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblo... 167 2e-039
gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblo... 167 2e-039
gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch... 167 2e-039
gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus cal... 167 2e-039
gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pin... 167 2e-039
gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus mag... 167 2e-039
gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus ph... 167 2e-039
gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus adde... 167 2e-039
gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from lobl... 167 2e-039
gb|DT627448.1|DT627448 EST1160524 Sequencing ESTs from lobl... 167 2e-039
gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciat... 165 7e-039
gb|DN456821.1|DN456821 EST952620 Sequencing ESTs from loblo... 163 3e-038
gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compr... 161 1e-037
gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root w... 159 4e-037
gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pi... 159 4e-037
gb|CF666125.1|CF666125 RTCNT1_21_B01.b1_A029 Root control P... 159 4e-037
gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus pota... 159 4e-037
gb|CX648563.1|CX648563 COLD1_29_A11.g1_A029 Root cold Pinus... 159 4e-037
gb|DN458978.1|DN458978 EST954777 Sequencing ESTs from loblo... 159 4e-037
gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus add... 159 4e-037
gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magn... 159 4e-037
gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added... 159 4e-037
gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root w... 157 2e-036
gb|BQ634840.1|BQ634840 NXRV073_G10_F NXRV (Nsf Xylem Root w... 157 2e-036
gb|CN784669.1|CN784669 EST783360 Sequencing ESTs from loblo... 157 2e-036
gb|CF396995.1|CF396995 RTDS2_25_B08.g1_A021 Drought-stresse... 151 1e-034
gb|CO410705.1|CO410705 EST841090 Sequencing ESTs from loblo... 151 1e-034
gb|CO414444.1|CO414444 EST844829 Sequencing ESTs from loblo... 151 1e-034
gb|CV139145.1|CV139145 EST850354 Sequencing ESTs from loblo... 151 1e-034
gb|CV146533.1|CV146533 EST857742 Sequencing ESTs from loblo... 151 1e-034
gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root w... 149 4e-034
gb|CV147199.1|CV147199 EST858408 Sequencing ESTs from loblo... 149 4e-034
gb|DN465607.1|DN465607 EST961406 Sequencing ESTs from loblo... 149 4e-034
gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus ad... 147 2e-033
gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root w... 145 6e-033
gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root w... 145 6e-033
gb|CO370474.1|CO370474 RTK1_68_D04.b1_A029 Roots minus pota... 145 6e-033
gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library ... 143 3e-032
gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root w... 143 3e-032
gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed... 143 3e-032
gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus adde... 143 3e-032
gb|BQ634789.1|BQ634789 NXRV073_C04_F NXRV (Nsf Xylem Root w... 141 1e-031
gb|BF049640.1|BF049640 NXCI_108_D04_F NXCI (Nsf Xylem Compr... 139 4e-031
gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root w... 139 4e-031
gb|BQ634282.1|BQ634282 NXRV067_A02_F NXRV (Nsf Xylem Root w... 139 4e-031
gb|BQ634365.1|BQ634365 NXRV068_A11_F NXRV (Nsf Xylem Root w... 139 4e-031
gb|BQ291272.1|BQ291272 NXRV058_B02_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ291438.1|BQ291438 NXRV059_B03_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634588.1|BQ634588 NXRV070_G09_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634933.1|BQ634933 NXRV074_H08_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|CV135705.1|CV135705 EST846914 Sequencing ESTs from loblo... 137 2e-030
gb|CV136681.1|CV136681 EST847890 Sequencing ESTs from loblo... 137 2e-030
gb|CV146671.1|CV146671 EST857880 Sequencing ESTs from loblo... 137 2e-030
gb|DN460354.1|DN460354 EST956153 Sequencing ESTs from loblo... 137 2e-030
gb|DR088954.1|DR088954 RTAL1_5_E05.g1_A029 Roots plus added... 137 2e-030
gb|DR165415.1|DR165415 RTPHOS1_4_H11.g1_A029 Roots minus ph... 137 2e-030
gb|BQ634437.1|BQ634437 NXRV068_H09_F NXRV (Nsf Xylem Root w... 135 6e-030
gb|BQ634799.1|BQ634799 NXRV073_D02_F NXRV (Nsf Xylem Root w... 135 6e-030
gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch ... 135 6e-030
gb|DN461170.1|DN461170 EST956969 Sequencing ESTs from loblo... 133 2e-029
gb|DR048278.1|DR048278 RTBOR1_7_E06.g2_A029 Roots plus adde... 133 2e-029
gb|BM133906.1|BM133906 NXLV_014_A03_F NXLV (Nsf Xylem Late ... 131 1e-028
gb|BQ633794.1|BQ633794 NXRV060_G12_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|BQ633964.1|BQ633964 NXRV063_A07_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|BQ634010.1|BQ634010 NXRV063_F10_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|BQ634416.1|BQ634416 NXRV068_F08_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|BQ634688.1|BQ634688 NXRV072_A09_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|CF392059.1|CF392059 RTDR3_12_A05.g1_A022 Loblolly pine r... 131 1e-028
gb|CF397322.1|CF397322 RTDS3_2_C10.g1_A022 Drought-stressed... 131 1e-028
gb|CF672900.1|CF672900 RTCNT1_74_E08.g1_A029 Root control P... 131 1e-028
gb|CN784059.1|CN784059 EST782750 Sequencing ESTs from loblo... 131 1e-028
gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pin... 131 1e-028
gb|CO198476.1|CO198476 GEO1_14_A08.b1_A029 Root gravitropis... 131 1e-028
gb|CV143487.1|CV143487 EST854696 Sequencing ESTs from loblo... 131 1e-028
gb|CV143580.1|CV143580 EST854789 Sequencing ESTs from loblo... 131 1e-028
gb|CV144621.1|CV144621 EST855830 Sequencing ESTs from loblo... 131 1e-028
gb|CV145023.1|CV145023 EST856232 Sequencing ESTs from loblo... 131 1e-028
gb|CV146487.1|CV146487 EST857696 Sequencing ESTs from loblo... 131 1e-028
gb|CX650576.1|CX650576 COLD1_46_D07.g1_A029 Root cold Pinus... 131 1e-028
gb|DN450569.1|DN450569 EST946368 Sequencing ESTs from loblo... 131 1e-028
gb|DN450769.1|DN450769 EST946568 Sequencing ESTs from loblo... 131 1e-028
gb|DN451693.1|DN451693 EST947492 Sequencing ESTs from loblo... 131 1e-028
gb|DN453422.1|DN453422 EST949221 Sequencing ESTs from loblo... 131 1e-028
gb|DN460159.1|DN460159 EST955958 Sequencing ESTs from loblo... 131 1e-028
gb|DN462130.1|DN462130 EST957929 Sequencing ESTs from loblo... 131 1e-028
gb|DN462378.1|DN462378 EST958177 Sequencing ESTs from loblo... 131 1e-028
gb|DR019503.1|DR019503 STRS1_30_B02.g1_A034 Shoot tip pitch... 131 1e-028
gb|DR060402.1|DR060402 RTNIT1_27_C12.g1_A029 Roots minus ni... 131 1e-028
gb|DR181434.1|DR181434 RTMNUT1_38_H12.g2_A029 Roots minus m... 131 1e-028
gb|DR742221.1|DR742221 RTCU1_2_C09.g1_A029 Roots plus added... 131 1e-028
gb|BQ633829.1|BQ633829 NXRV061_D03_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|BQ634819.1|BQ634819 NXRV073_E11_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|BQ634896.1|BQ634896 NXRV074_D12_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|BQ634991.1|BQ634991 NXRV075_E11_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|CF475717.1|CF475717 RTWW2_11_F09.g1_A021 Well-watered lo... 129 4e-028
gb|CF479006.1|CF479006 RTWW3_21_C01.g1_A022 Well-watered lo... 129 4e-028
gb|CV135398.1|CV135398 EST846607 Sequencing ESTs from loblo... 129 4e-028
gb|CX715106.1|CX715106 RTPQ1_31_G11.b1_A032 Roots treated w... 129 4e-028
gb|DN453264.1|DN453264 EST949063 Sequencing ESTs from loblo... 129 4e-028
gb|BQ634723.1|BQ634723 NXRV072_E04_F NXRV (Nsf Xylem Root w... 127 2e-027
gb|DN454358.1|DN454358 EST950157 Sequencing ESTs from loblo... 125 6e-027
gb|BX251009.1|BX251009 BX251009 Pinus pinaster differenciat... 123 2e-026
gb|BQ634699.1|BQ634699 NXRV072_C01_F NXRV (Nsf Xylem Root w... 123 2e-026
gb|CF664627.1|CF664627 RTCNT1_11_B06.b1_A029 Root control P... 123 2e-026
gb|DR023615.1|DR023615 STRS1_58_H07.g1_A034 Shoot tip pitch... 123 2e-026
gb|BQ291314.1|BQ291314 NXRV058_F01_F NXRV (Nsf Xylem Root w... 121 9e-026
gb|BQ634021.1|BQ634021 NXRV063_G10_F NXRV (Nsf Xylem Root w... 121 9e-026
gb|CO170879.1|CO170879 NDL1_17_C09.g1_A029 Needles control ... 121 9e-026
gb|CO370412.1|CO370412 RTK1_67_E10.g1_A029 Roots minus pota... 121 9e-026
gb|CV036226.1|CV036226 RTNACL1_57_D06.g1_A029 Roots plus ad... 121 9e-026
gb|BQ634581.1|BQ634581 NXRV070_G02_F NXRV (Nsf Xylem Root w... 119 4e-025
gb|DR015725.1|DR015725 STRS1_5_F07.b1_A034 Shoot tip pitch ... 119 4e-025
gb|CV138640.1|CV138640 EST849849 Sequencing ESTs from loblo... 117 1e-024
gb|DR089689.1|DR089689 RTAL1_10_E12.b1_A029 Roots plus adde... 117 1e-024
gb|CF395706.1|CF395706 RTDS2_16_F06.g1_A021 Drought-stresse... 115 6e-024
gb|DR024290.1|DR024290 STRS1_63_G12.g1_A034 Shoot tip pitch... 115 6e-024
gb|BQ634505.1|BQ634505 NXRV069_G06_F NXRV (Nsf Xylem Root w... 109 4e-022
gb|BX682912.1|BX682912 BX682912 Pinus pinaster differenciat... 109 4e-022
gb|DR019436.1|DR019436 STRS1_30_B05.b1_A034 Shoot tip pitch... 109 4e-022
gb|DR165772.1|DR165772 RTPHOS1_7_F02.b1_A029 Roots minus ph... 109 4e-022
gb|CO163180.1|CO163180 FLD1_40_B01.b1_A029 Root flooded Pin... 107 1e-021
gb|DR022357.1|DR022357 STRS1_50_B12.g1_A034 Shoot tip pitch... 107 1e-021
gb|BQ633946.1|BQ633946 NXRV062_G08_F NXRV (Nsf Xylem Root w... 105 6e-021
gb|BQ634048.1|BQ634048 NXRV065_B03_F NXRV (Nsf Xylem Root w... 105 6e-021
gb|CO198700.1|CO198700 GEO1_15_G10.g1_A029 Root gravitropis... 105 6e-021
gb|CO162703.1|CO162703 FLD1_37_B04.b1_A029 Root flooded Pin... 103 2e-020
gb|DR119157.1|DR119157 RTMG1_21_C02.g1_A029 Roots minus mag... 103 2e-020
gb|DR117464.1|DR117464 RTMG1_7_D06.b1_A029 Roots minus magn... 101 9e-020
gb|DR742100.1|DR742100 RTCU1_1_E12.g1_A029 Roots plus added... 101 9e-020
gb|DR742109.1|DR742109 RTCU1_1_F12.g1_A029 Roots plus added... 101 9e-020
gb|DR745200.1|DR745200 RTCU1_27_E11.g1_A029 Roots plus adde... 101 9e-020
gb|BQ634611.1|BQ634611 NXRV071_A12_F NXRV (Nsf Xylem Root w... 100 3e-019
gb|CF479371.1|CF479371 RTWW3_23_G07.g1_A022 Well-watered lo... 100 3e-019
gb|DR015133.1|DR015133 STRS1_1_E06.g1_A034 Shoot tip pitch ... 100 3e-019
gb|DR095954.1|DR095954 STRR1_24_F04.g1_A033 Stem Response R... 100 3e-019
gb|DR744291.1|DR744291 RTCU1_21_B02.g1_A029 Roots plus adde... 100 3e-019
gb|BQ634373.1|BQ634373 NXRV068_B07_F NXRV (Nsf Xylem Root w... 98 1e-018
gb|CF396141.1|CF396141 RTDS2_13_C12.g1_A021 Drought-stresse... 98 1e-018
gb|CO365340.1|CO365340 RTK1_25_C10.b1_A029 Roots minus pota... 98 1e-018
gb|DR050236.1|DR050236 RTBOR1_22_D10.b1_A029 Roots plus add... 98 1e-018
gb|BQ633865.1|BQ633865 NXRV061_G10_F NXRV (Nsf Xylem Root w... 94 2e-017
gb|CO167214.1|CO167214 FLD1_67_D01.g1_A029 Root flooded Pin... 94 2e-017
gb|BQ634164.1|BQ634164 NXRV064_E09_F NXRV (Nsf Xylem Root w... 90 3e-016
gb|CF665508.1|CF665508 RTCNT1_16_A06.g1_A029 Root control P... 90 3e-016
gb|CV036619.1|CV036619 RTNACL1_60_B12.g1_A029 Roots plus ad... 90 3e-016
gb|BQ634425.1|BQ634425 NXRV068_G05_F NXRV (Nsf Xylem Root w... 88 1e-015
gb|CO370312.1|CO370312 RTK1_67_C05.b1_A029 Roots minus pota... 88 1e-015
gb|DR090601.1|DR090601 RTAL1_16_E05.b1_A029 Roots plus adde... 86 5e-015
gb|DR090676.1|DR090676 RTAL1_16_E05.g1_A029 Roots plus adde... 86 5e-015
gb|DR742023.1|DR742023 RTCU1_1_E12.b1_A029 Roots plus added... 86 5e-015
gb|DR742032.1|DR742032 RTCU1_1_F12.b1_A029 Roots plus added... 86 5e-015
gb|DR745129.1|DR745129 RTCU1_27_E11.b1_A029 Roots plus adde... 86 5e-015
gb|AA556353.1|AA556353 208 Loblolly pine C Pinus taeda cDNA... 84 2e-014
gb|BQ291465.1|BQ291465 NXRV059_D11_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|BQ291474.1|BQ291474 NXRV059_E10_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|BQ634608.1|BQ634608 NXRV071_A08_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|CF391568.1|CF391568 RTDR3_9_F08.g1_A022 Loblolly pine ro... 84 2e-014
gb|CF668455.1|CF668455 RTCNT1_36_C10.g1_A029 Root control P... 84 2e-014
gb|CO198912.1|CO198912 GEO1_17_A08.g1_A029 Root gravitropis... 84 2e-014
gb|DR072460.1|DR072460 RTDK1_26_A04.g1_A029 Roots, dark Pin... 84 2e-014
gb|DR100832.1|DR100832 STRR1_68_D06.g1_A033 Stem Response R... 84 2e-014
gb|DR109772.1|DR109772 RTS1_4_E10.g1_A029 Roots minus sulfu... 84 2e-014
gb|BQ635001.1|BQ635001 NXRV075_F12_F NXRV (Nsf Xylem Root w... 82 8e-014
gb|DR092747.1|DR092747 STRR1_3_E02.g1_A033 Stem Response Re... 82 8e-014
gb|DR102019.1|DR102019 STRR1_77_C01.g1_A033 Stem Response R... 82 8e-014
gb|BX253436.1|BX253436 BX253436 Pinus pinaster differenciat... 80 3e-013
gb|BX255255.1|BX255255 BX255255 Pinus pinaster differenciat... 80 3e-013
gb|BQ106776.1|BQ106776 NXLV089_C10_F NXLV (Nsf Xylem Late w... 80 3e-013
gb|CF391955.1|CF391955 RTDR3_12_A05.b1_A022 Loblolly pine r... 80 3e-013
gb|CF393123.1|CF393123 RTDR3_17_F03.b1_A022 Loblolly pine r... 80 3e-013
gb|CF393207.1|CF393207 RTDR3_17_A05.g1_A022 Loblolly pine r... 80 3e-013
gb|CF663638.1|CF663638 RTCNT1_4_E08.b1_A029 Root control Pi... 80 3e-013
gb|CF664953.1|CF664953 RTCNT1_13_A06.b1_A029 Root control P... 80 3e-013
gb|CF667646.1|CF667646 RTCNT1_31_D11.g1_A029 Root control P... 80 3e-013
gb|CF672828.1|CF672828 RTCNT1_74_E08.b1_A029 Root control P... 80 3e-013
gb|BX682783.1|BX682783 BX682783 Pinus pinaster differenciat... 80 3e-013
gb|CO160100.1|CO160100 FLD1_18_H03.b1_A029 Root flooded Pin... 80 3e-013
gb|CO164789.1|CO164789 FLD1_50_G08.b1_A029 Root flooded Pin... 80 3e-013
gb|CO174346.1|CO174346 NDL1_43_A11.g1_A029 Needles control ... 80 3e-013
gb|CO198151.1|CO198151 GEO1_11_D06.g1_A029 Root gravitropis... 80 3e-013
gb|CO198640.1|CO198640 GEO1_15_G10.b1_A029 Root gravitropis... 80 3e-013
gb|CO198839.1|CO198839 GEO1_17_A08.b1_A029 Root gravitropis... 80 3e-013
gb|CO369566.1|CO369566 RTK1_48_C03.b1_A029 Roots minus pota... 80 3e-013
gb|CO370549.1|CO370549 RTK1_68_D04.g1_A029 Roots minus pota... 80 3e-013
gb|CX648487.1|CX648487 COLD1_29_A11.b1_A029 Root cold Pinus... 80 3e-013
gb|CX651399.1|CX651399 COLD1_52_D06.b1_A029 Root cold Pinus... 80 3e-013
gb|DR015930.1|DR015930 STRS1_6_C10.g1_A034 Shoot tip pitch ... 80 3e-013
gb|DR019434.1|DR019434 STRS1_30_B02.b1_A034 Shoot tip pitch... 80 3e-013
gb|DR023542.1|DR023542 STRS1_58_H07.b1_A034 Shoot tip pitch... 80 3e-013
gb|DR049913.1|DR049913 RTBOR1_20_A01.b1_A029 Roots plus add... 80 3e-013
gb|DR049974.1|DR049974 RTBOR1_20_A01.g1_A029 Roots plus add... 80 3e-013
gb|DR055669.1|DR055669 RTCA1_25_D10.b1_A029 Roots minus cal... 80 3e-013
gb|DR072378.1|DR072378 RTDK1_26_A04.b1_A029 Roots, dark Pin... 80 3e-013
gb|DR088873.1|DR088873 RTAL1_5_E05.b1_A029 Roots plus added... 80 3e-013
gb|DR089774.1|DR089774 RTAL1_10_E12.g1_A029 Roots plus adde... 80 3e-013
gb|DR092259.1|DR092259 RTAL1_28_A09.b1_A029 Roots plus adde... 80 3e-013
gb|DR095718.1|DR095718 STRR1_23_D08.b1_A033 Stem Response R... 80 3e-013
gb|DR100799.1|DR100799 STRR1_68_D06.b1_A033 Stem Response R... 80 3e-013
gb|DR101356.1|DR101356 STRR1_72_G11.b1_A033 Stem Response R... 80 3e-013
gb|DR102518.1|DR102518 STRR1_81_E08.g1_A033 Stem Response R... 80 3e-013
gb|DR109721.1|DR109721 RTS1_4_E10.b1_A029 Roots minus sulfu... 80 3e-013
gb|DR112407.1|DR112407 RTS1_28_B05.b1_A029 Roots minus sulf... 80 3e-013
gb|DR181355.1|DR181355 RTMNUT1_38_H12.b2_A029 Roots minus m... 80 3e-013
gb|DR385328.1|DR385328 RTHG1_8_B04.b1_A029 Roots plus added... 80 3e-013
gb|DR385514.1|DR385514 RTHG1_9_D06.b1_A029 Roots plus added... 80 3e-013
gb|DR386120.1|DR386120 RTHG1_13_C06.b1_A029 Roots plus adde... 80 3e-013
gb|DR386200.1|DR386200 RTHG1_13_C06.g1_A029 Roots plus adde... 80 3e-013
gb|DR742910.1|DR742910 RTCU1_7_F11.g2_A029 Roots plus added... 80 3e-013
gb|DR015050.1|DR015050 STRS1_1_E06.b1_A034 Shoot tip pitch ... 78 1e-012
gb|BQ634047.1|BQ634047 NXRV065_B02_F NXRV (Nsf Xylem Root w... 76 5e-012
gb|BQ634157.1|BQ634157 NXRV064_D12_F NXRV (Nsf Xylem Root w... 76 5e-012
gb|BQ634392.1|BQ634392 NXRV068_D05_F NXRV (Nsf Xylem Root w... 76 5e-012
gb|CF665029.1|CF665029 RTCNT1_13_A06.g1_A029 Root control P... 76 5e-012
gb|DR018826.1|DR018826 STRS1_26_A10.b2_A034 Shoot tip pitch... 76 5e-012
gb|BQ290867.1|BQ290867 NXRV050_F06_F NXRV (Nsf Xylem Root w... 74 2e-011
gb|BX677794.1|BX677794 BX677794 RN Pinus pinaster cDNA clon... 74 2e-011
gb|CO369280.1|CO369280 RTK1_46_D01.b1_A029 Roots minus pota... 74 2e-011
gb|BX249873.1|BX249873 BX249873 Pinus pinaster differenciat... 72 8e-011
gb|BM493762.1|BM493762 NXLV_067_C01_F NXLV (Nsf Xylem Late ... 72 8e-011
gb|BM903034.1|BM903034 NXLV_078_D07_F NXLV (Nsf Xylem Late ... 72 8e-011
gb|BQ196885.1|BQ196885 NXLV106_E09_F NXLV (Nsf Xylem Late w... 72 8e-011
gb|BQ196977.1|BQ196977 NXLV107_G10_F NXLV (Nsf Xylem Late w... 72 8e-011
gb|BQ634922.1|BQ634922 NXRV074_G08_F NXRV (Nsf Xylem Root w... 72 8e-011
gb|CF390989.1|CF390989 RTDR3_3_H05.b1_A022 Loblolly pine ro... 72 8e-011
gb|CF391457.1|CF391457 RTDR3_9_F08.b1_A022 Loblolly pine ro... 72 8e-011
gb|CF393948.1|CF393948 RTDS2_2_E04.b1_A021 Drought-stressed... 72 8e-011
gb|CF394977.1|CF394977 RTDS2_8_B01.g1_A021 Drought-stressed... 72 8e-011
gb|CF395036.1|CF395036 RTDS2_9_A02.b1_A021 Drought-stressed... 72 8e-011
gb|CF396949.1|CF396949 RTDS2_25_B08.b1_A021 Drought-stresse... 72 8e-011
gb|CF473029.1|CF473029 RTDS1_1_G06.b1_A015 Drought-stressed... 72 8e-011
gb|CF474827.1|CF474827 RTWW2_8_E08.b1_A021 Well-watered lob... 72 8e-011
gb|CF475433.1|CF475433 RTWW2_12_G08.b1_A021 Well-watered lo... 72 8e-011
gb|CF475582.1|CF475582 RTWW2_11_F09.b1_A021 Well-watered lo... 72 8e-011
gb|CF478918.1|CF478918 RTWW3_21_A01.b1_A022 Well-watered lo... 72 8e-011
gb|CF479261.1|CF479261 RTWW3_23_G07.b1_A022 Well-watered lo... 72 8e-011
gb|CO170812.1|CO170812 NDL1_17_C09.b1_A029 Needles control ... 72 8e-011
gb|CO370335.1|CO370335 RTK1_67_E10.b1_A029 Roots minus pota... 72 8e-011
gb|CV036552.1|CV036552 RTNACL1_60_B12.b1_A029 Roots plus ad... 72 8e-011
gb|CX650502.1|CX650502 COLD1_46_D07.b1_A029 Root cold Pinus... 72 8e-011
gb|DR018960.1|DR018960 STRS1_27_A10.b1_A034 Shoot tip pitch... 72 8e-011
gb|DR018971.1|DR018971 STRS1_27_B10.b1_A034 Shoot tip pitch... 72 8e-011
gb|DR019324.1|DR019324 STRS1_29_F01.b1_A034 Shoot tip pitch... 72 8e-011
gb|DR019506.1|DR019506 STRS1_30_B05.g1_A034 Shoot tip pitch... 72 8e-011
gb|DR022286.1|DR022286 STRS1_50_B12.b1_A034 Shoot tip pitch... 72 8e-011
gb|DR049795.1|DR049795 RTBOR1_19_D05.b1_A029 Roots plus add... 72 8e-011
gb|DR054087.1|DR054087 RTCA1_15_D12.b1_A029 Roots minus cal... 72 8e-011
gb|DR054171.1|DR054171 RTCA1_15_D12.g1_A029 Roots minus cal... 72 8e-011
gb|DR058806.1|DR058806 RTNIT1_14_B03.b1_A029 Roots minus ni... 72 8e-011
gb|DR060319.1|DR060319 RTNIT1_27_C12.b1_A029 Roots minus ni... 72 8e-011
gb|DR060584.1|DR060584 RTNIT1_28_F03.g1_A029 Roots minus ni... 72 8e-011
gb|DR092693.1|DR092693 STRR1_3_E02.b1_A033 Stem Response Re... 72 8e-011
gb|DR094847.1|DR094847 STRR1_17_D09.b1_A033 Stem Response R... 72 8e-011
gb|DR099736.1|DR099736 STRR1_58_D07.b1_A033 Stem Response R... 72 8e-011
gb|DR386162.1|DR386162 RTHG1_13_G10.b1_A029 Roots plus adde... 72 8e-011
gb|DR388036.1|DR388036 RTHG1_25_F08.g1_A029 Roots plus adde... 72 8e-011
gb|BX249096.1|BX249096 BX249096 Pinus pinaster differenciat... 70 3e-010
gb|CF397218.1|CF397218 RTDS3_2_C10.b2_A022 Drought-stressed... 70 3e-010
gb|CF473083.1|CF473083 RTDS1_1_G06.g1_A015 Drought-stressed... 70 3e-010
gb|DR112763.1|DR112763 RTS1_30_A05.g1_A029 Roots minus sulf... 70 3e-010
gb|CF475563.1|CF475563 RTWW2_12_G08.g1_A021 Well-watered lo... 68 1e-009
gb|BF518192.1|BF518192 NXSI_036_B11_F NXSI (Nsf Xylem Side ... 64 2e-008
gb|CO369362.1|CO369362 RTK1_46_D01.g1_A029 Roots minus pota... 64 2e-008
gb|DR054424.1|DR054424 RTCA1_17_F04.b1_A029 Roots minus cal... 64 2e-008
gb|DR109585.1|DR109585 RTS1_3_F11.b1_A029 Roots minus sulfu... 64 2e-008
gb|CF391125.1|CF391125 RTDR3_4_H08.b1_A022 Loblolly pine ro... 60 3e-007
gb|CF391267.1|CF391267 RTDR3_4_H08.g1_A022 Loblolly pine ro... 60 3e-007
gb|CF665425.1|CF665425 RTCNT1_16_A06.b1_A029 Root control P... 60 3e-007
gb|CO362096.1|CO362096 RTK1_1_E10.b1_A029 Roots minus potas... 60 3e-007
gb|DR095881.1|DR095881 STRR1_24_F04.b1_A033 Stem Response R... 60 3e-007
gb|AA740032.1|AA740032 797 PtIFG2 Pinus taeda cDNA clone 92... 58 1e-006
gb|BF517646.1|BF517646 NXSI_028_C04_F NXSI (Nsf Xylem Side ... 56 5e-006
gb|BG040865.1|BG040865 NXSI_116_A11_F NXSI (Nsf Xylem Side ... 56 5e-006
gb|BQ106864.1|BQ106864 NXLV082_C10_F NXLV (Nsf Xylem Late w... 54 2e-005
gb|CR392211.1|CR392211 CR392211 RN Pinus pinaster cDNA clon... 54 2e-005
gb|DN629979.1|DN629979 EST980795 Subtracted pine embryo lib... 54 2e-005
gb|DT630192.1|DT630192 EST1154604 Subtracted pine embryo li... 54 2e-005
gb|BQ290718.1|BQ290718 NXRV048_G03_F NXRV (Nsf Xylem Root w... 50 3e-004
gb|DR163073.1|DR163073 RTFE1_24_B05.g1_A029 Roots minus iro... 50 3e-004
gb|BF778720.1|BF778720 NXSI_086_C06_F NXSI (Nsf Xylem Side ... 46 0.004
gb|BG317659.1|BG317659 NXPV_004_C11_F NXPV (Nsf Xylem Plani... 46 0.004
gb|BM367365.1|BM367365 NXLV_048_C05_F NXLV (Nsf Xylem Late ... 46 0.004
gb|CF667418.1|CF667418 RTCNT1_30_D03.b1_A029 Root control P... 46 0.004
gb|BX682809.1|BX682809 BX682809 Pinus pinaster differenciat... 46 0.004
gb|CX650615.1|CX650615 COLD1_46_H05.g1_A029 Root cold Pinus... 46 0.004
gb|CX651625.1|CX651625 COLD1_53_E03.g1_A029 Root cold Pinus... 46 0.004
gb|DN631750.1|DN631750 EST982566 Subtracted pine embryo lib... 46 0.004
gb|BQ634898.1|BQ634898 NXRV074_E02_F NXRV (Nsf Xylem Root w... 44 0.017
gb|CF396120.1|CF396120 RTDS2_13_H06.g1_A021 Drought-stresse... 44 0.017
gb|BQ634966.1|BQ634966 NXRV075_C09_F NXRV (Nsf Xylem Root w... 42 0.069
gb|CF393151.1|CF393151 RTDR3_17_F03.g1_A022 Loblolly pine r... 42 0.069
gb|BX251415.1|BX251415 BX251415 Pinus pinaster differenciat... 40 0.27
gb|BX253934.1|BX253934 BX253934 Pinus pinaster differenciat... 40 0.27
gb|BQ633811.1|BQ633811 NXRV061_B01_F NXRV (Nsf Xylem Root w... 40 0.27
gb|DR742421.1|DR742421 RTCU1_3_H10.g2_A029 Roots plus added... 40 0.27
>gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_055_C08 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 526
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 273 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 214
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 213 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 154
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 153 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 94
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 93 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 34
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 33 taacggataacatttgcagtgtttcctctcca 2
>gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C08 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 731
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 607 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 548
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 547 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 488
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 487 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 428
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 427 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 368
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 367 taacggataacatttgcagtgtttcctctcca 336
>gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 795
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 605 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 546
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 545 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 486
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 485 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 426
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 425 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 366
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 365 taacggataacatttgcagtgtttcctctcca 334
>gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_E04_A021 5', mRNA sequence
Length = 724
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 600 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 541
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 540 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 481
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 480 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 421
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 420 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 361
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 360 taacggataacatttgcagtgtttcctctcca 329
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 720 ggcttcagagaatcatacattccaaagtataaaccacgatagaccataattcccacacaa 661
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 660 gaaatgttgaacccacgatagag 638
>gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_8_E08_A021 5', mRNA sequence
Length = 723
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 661 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 602
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 601 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 542
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 541 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 482
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 481 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 422
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 421 taacggataacatttgcagtgtttcctctcca 390
>gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130D05 similar to ADP,ATP carrier protein,
mRNA sequence
Length = 475
Score = 167 bits (84), Expect = 2e-039
Identities = 216/260 (83%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| ||||||||||| || ||
Sbjct: 286 ccattaaattgcctctcccctcccttctttgcagccttgttatcattggccagccgagtt 227
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 226 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 167
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 166 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 107
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 106 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 47
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 46 tttgcagtgtttcctctcca 27
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 418 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 359
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 358 gaaatgttgaacccacgatagag 336
>gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B01_A029 5', mRNA sequence
Length = 810
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 735 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 676
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 675 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 616
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 615 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 556
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 555 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 496
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 495 taacggataacatttgcagtgtttcctctcca 464
>gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G08_A029 5', mRNA sequence
Length = 839
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 332 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 273
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 272 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 213
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 212 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 153
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 152 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 93
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 92 taacggataacatttgcagtgtttcctctcca 61
Score = 79.8 bits (40), Expect = 3e-013
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||| || || | ||| |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 707 acaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgacttg 648
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||| || ||| ||||||||| || || || ||||| || || |||||||| || |||
Sbjct: 647 gcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgcc 588
Query: 578 tcaccagatgtcatcatcat 597
||||| || |||||||||||
Sbjct: 587 tcaccggaagtcatcatcat 568
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 452 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 393
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 392 gaaatgttgaacccacgatagag 370
>gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_D01_A029 3', mRNA sequence
Length = 872
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 540 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 481
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 480 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 421
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 420 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 361
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 360 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 301
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 300 taacggataacatttgcagtgtttcctctcca 269
Score = 46.1 bits (23), Expect = 0.004
Identities = 74/91 (81%)
Strand = Plus / Minus
Query: 507 agagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgt 566
|||| ||||||| ||| || ||| ||||||||| || || || ||||| || || ||||
Sbjct: 866 agagtgacttggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgt 807
Query: 567 acttgacggcctcaccagatgtcatcatcat 597
|||| || |||||||| || |||||||||||
Sbjct: 806 acttaactgcctcaccggaagtcatcatcat 776
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 660 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 601
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 600 gaaatgttgaacccacgatagag 578
>gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIF743 5' end, mRNA sequence
Length = 950
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 870 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 811
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 810 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 751
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 750 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 691
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 690 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 631
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 630 taacggataacatttgcagtgtttcctctcca 599
>gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIGZ32 5' end, mRNA sequence
Length = 925
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 870 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 811
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 810 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 751
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 750 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 691
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 690 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 631
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 630 taacggataacatttgcagtgtttcctctcca 599
>gb|DN457452.1|DN457452 EST953251 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIH004 5' end, mRNA sequence
Length = 902
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 899 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 840
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 839 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 780
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 779 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 720
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 719 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 660
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 659 taacggataacatttgcagtgtttcctctcca 628
>gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPII480 5' end, mRNA sequence
Length = 926
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 880 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 821
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 820 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 761
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 760 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 701
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 700 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 641
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 640 taacggataacatttgcagtgtttcctctcca 609
>gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIJS53 5' end, mRNA sequence
Length = 947
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 880 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 821
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 820 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 761
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 760 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 701
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 700 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 641
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 640 taacggataacatttgcagtgtttcctctcca 609
>gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_A10_A034 5', mRNA sequence
Length = 852
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 467 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 408
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 407 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 348
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 347 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 288
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 287 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 228
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 227 taacggataacatttgcagtgtttcctctcca 196
Score = 71.9 bits (36), Expect = 8e-011
Identities = 114/140 (81%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||| || || | ||| |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 842 acaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgacttg 783
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||| || ||| ||||||||| || || || ||||| || || |||||||| || ||
Sbjct: 782 gcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgct 723
Query: 578 tcaccagatgtcatcatcat 597
||||| || |||||||||||
Sbjct: 722 tcaccggaagtcatcatcat 703
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 587 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 528
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 527 gaaatgttgaacccacgatagag 505
>gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B04_A029 3', mRNA sequence
Length = 812
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Plus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 434 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 493
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 494 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 553
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 554 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 613
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 614 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 673
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 674 taacggataacatttgcagtgtttcctctcca 705
Score = 71.9 bits (36), Expect = 8e-011
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||| || || | ||| |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 59 acaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgacttg 118
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||| || ||| ||||||||| || || || ||||| || || |||||||| || ||
Sbjct: 119 gcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgct 178
Query: 578 tcaccagatgtcatcatcat 597
||||| || |||||||||||
Sbjct: 179 tcaccggaagtcatcatcat 198
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 314 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 373
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 374 gaaatgttgaacccacgatagag 396
>gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_25_F11_A029 5', mRNA sequence
Length = 666
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 397 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 338
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 337 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 278
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 277 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 218
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 217 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 158
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 157 taacggataacatttgcagtgtttcctctcca 126
>gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_21_C02_A029 3', mRNA sequence
Length = 876
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Plus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 265 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 324
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 325 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 384
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 385 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 444
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 445 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 504
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 505 taacggataacatttgcagtgtttcctctcca 536
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 145 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 204
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 205 gaaatgttgaacccacgatagag 227
>gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_7_F02_A029 5', mRNA sequence
Length = 890
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 539 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 480
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 479 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 420
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 419 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 360
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 359 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 300
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 299 taacggataacatttgcagtgtttcctctcca 268
Score = 63.9 bits (32), Expect = 2e-008
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 482 aggatgtttgcgccagcacccttgaagagggacttggtaccctcctttgcgacaatctgc 541
||||| ||||| || |||||||||||||| ||||||| ||| || ||| |||||||||
Sbjct: 890 aggatatttgcacctgcacccttgaagagtgacttggcaccttcattttggacaatctgt 831
Query: 542 ttgaaagcgtccaaggagctgttgtacttgacggcctcaccagatgtcatcatcat 597
|| || || ||||| || || |||||||| || || ||||| || |||||||||||
Sbjct: 830 ttaaatgcatccaacgaacttttgtacttaactgcttcaccggaagtcatcatcat 775
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 659 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 600
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 599 gaaatgttgaacccacgatagag 577
>gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_13_G10_A029 5', mRNA sequence
Length = 793
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 564 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 505
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 504 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 445
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 444 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 385
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 384 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 325
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 324 taacggataacatttgcagtgtttcctctcca 293
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 684 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 625
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 624 gaaatgttgaacccacgatagag 602
>gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAL08 5' end, mRNA sequence
Length = 950
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 870 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 811
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 810 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 751
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 750 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 691
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 690 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 631
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 630 taacggataacatttgcagtgtttcctctcca 599
>gb|DT627448.1|DT627448 EST1160524 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAY69 5' end, mRNA sequence
Length = 920
Score = 167 bits (84), Expect = 2e-039
Identities = 225/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 880 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 821
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 820 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 761
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 760 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 701
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 700 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 641
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 640 taacggataacatttgcagtgtttcctctcca 609
>gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP023C03 similar to ADP,ATP CARRIER PROTEIN,
mRNA sequence
Length = 669
Score = 165 bits (83), Expect = 7e-039
Identities = 209/251 (83%)
Strand = Plus / Minus
Query: 854 tgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtag 913
|||||||| || |||||||||||||||||| ||||||||||| || || || || |||
Sbjct: 565 tgcctctcccctcccttctttgcagccttgttatcattggccagccgagttcgagcatag 506
Query: 914 tccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagattt 973
|||| |||||| ||||| | ||||| | |||||||| || |||||||| ||||| |||
Sbjct: 505 tccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagaggccaggttt 446
Query: 974 ccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaag 1033
||||||||||| |||||||| |||||| |||| ||||| || || || | | ||| |||
Sbjct: 445 ccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaag 386
Query: 1034 tgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtg 1093
| ||||||||||||||||||||| ||||| ||||| || |||||||| ||||| || |||
Sbjct: 385 taatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtg 326
Query: 1094 tttcctctcca 1104
|||||||||||
Sbjct: 325 tttcctctcca 315
>gb|DN456821.1|DN456821 EST952620 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIGT18 5' end, mRNA sequence
Length = 870
Score = 163 bits (82), Expect = 3e-038
Identities = 223/270 (82%)
Strand = Plus / Minus
Query: 835 atcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggc 894
|||||| || ||||| || |||||||| || |||||||||||||||||| |||||| ||
Sbjct: 870 atcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcattagc 811
Query: 895 caaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagc 954
|| || || || || ||||||| |||||| ||||| | ||||| | |||||||| ||
Sbjct: 810 cagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgc 751
Query: 955 tccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaa 1014
|||||||| ||||| |||||||||||||| |||||||| |||||| |||| ||||| ||
Sbjct: 750 accaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaa 691
Query: 1015 gttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagta 1074
|| || | | ||| |||| ||||||||||||||||||||| ||||| ||||| || ||
Sbjct: 690 attaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaata 631
Query: 1075 acggatgacattagctgtgtttcctctcca 1104
|||||| ||||| || ||||||||||||||
Sbjct: 630 acggataacatttgcagtgtttcctctcca 601
>gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_127_H07 5' similar to Arabidopsis
thaliana sequence At4g28390 ADP,ATP carrier-like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 370
Score = 161 bits (81), Expect = 1e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || || ||||| || |||||||||||||||||| ||||||
Sbjct: 296 acatcaacaagcccattaaattgnctctcccctcccttctttgcagccttgttatcatta 237
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 236 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 177
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 176 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 117
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 116 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 57
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 56 taacggataacatttgcagtgtttcctctcca 25
>gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV066_E11 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 756
Score = 159 bits (80), Expect = 4e-037
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 854 tgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtag 913
|||||||| || |||||||||||||||||| |||||| |||| || || || || |||
Sbjct: 584 tgcctctccccncccttctttgcagccttgttatcattagccagccgagttcgagcatag 525
Query: 914 tccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagattt 973
|||| |||||| ||||| | ||||| | |||||||| || |||||||| ||||| |||
Sbjct: 524 tccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagaggccaggttt 465
Query: 974 ccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaag 1033
||||||||||| |||||||| |||||| |||| ||||| || || || | | ||| |||
Sbjct: 464 ccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaag 405
Query: 1034 tgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtg 1093
| ||||||||||||||||||||| ||||| ||||| || |||||||| ||||| || |||
Sbjct: 404 taatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtg 345
Query: 1094 tttcctctcca 1104
|||||||||||
Sbjct: 344 tttcctctcca 334
>gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_E08_A029 5', mRNA sequence
Length = 784
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 638 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 579
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 578 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 519
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 518 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 459
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 458 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 399
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 398 tttgcagtgtttcctctcca 379
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 770 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 711
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 710 gaaatgttgaacccacgatagag 688
>gb|CF666125.1|CF666125 RTCNT1_21_B01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_21_B01_A029 3', mRNA sequence
Length = 692
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 54 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 113
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 114 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 173
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 174 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 233
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 234 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 293
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 294 tttgcagtgtttcctctcca 313
>gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_E04_A029 3', mRNA sequence
Length = 878
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Plus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 126 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 185
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 186 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 245
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 246 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 305
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 306 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 365
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 366 tttgcagtgtttcctctcca 385
>gb|CX648563.1|CX648563 COLD1_29_A11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_29_A11_A029 5', mRNA sequence
Length = 881
Score = 159 bits (80), Expect = 4e-037
Identities = 225/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 835 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 776
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| |||||| ||||| | ||||||||
Sbjct: 775 gccagccgagttcgagcatagtccaaagaataaacaaaggg-agagaagatgcaccagct 717
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 716 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 657
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 656 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 597
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 596 taacggataacatttgcagtgtttcctctcca 565
>gb|DN458978.1|DN458978 EST954777 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIHH89 5' end, mRNA sequence
Length = 906
Score = 159 bits (80), Expect = 4e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||| ||| ||||||
Sbjct: 900 acatcaacaagcccattaaattgcctctcccctcccttctttgcagcgttgttatcatta 841
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 840 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 781
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 780 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 721
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 720 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 661
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 660 taacggataacatttgcagtgtttcctctcca 629
>gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D10_A029 5', mRNA sequence
Length = 790
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 358 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 299
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 298 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 239
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 238 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 179
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 178 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 119
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 118 tttgcagtgtttcctctcca 99
Score = 79.8 bits (40), Expect = 3e-013
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||| || || | ||| |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 745 acaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgacttg 686
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||| || ||| ||||||||| || || || ||||| || || |||||||| || |||
Sbjct: 685 gaaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgcc 626
Query: 578 tcaccagatgtcatcatcat 597
||||| || |||||||||||
Sbjct: 625 tcaccggaagtcatcatcat 606
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 490 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 431
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 430 gaaatgttgaacccacgatagag 408
>gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D06_A029 5', mRNA sequence
Length = 837
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 569 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 510
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 509 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 450
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 449 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 390
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 389 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 330
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 329 tttgcagtgtttcctctcca 310
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 701 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 642
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 641 gaaatgttgaacccacgatagag 619
>gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_D06_A029 5', mRNA sequence
Length = 731
Score = 159 bits (80), Expect = 4e-037
Identities = 215/260 (82%)
Strand = Plus / Minus
Query: 845 ccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgta 904
||||| || |||||||| || |||||||||||||||||| |||||| |||| || ||
Sbjct: 465 ccattaaattgcctctcccctcccttctttgcagccttgttatcattagccagccgagtt 406
Query: 905 cgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaa 964
|| || ||||||| |||||| ||||| | ||||| | |||||||| || ||||||||
Sbjct: 405 cgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagag 346
Query: 965 gccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatg 1024
||||| |||||||||||||| |||||||| |||||| |||| ||||| || || || |
Sbjct: 345 gccaggtttccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagt 286
Query: 1025 cgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgaca 1084
| ||| |||| ||||||||||||||||||||| ||||| ||||| || |||||||| |||
Sbjct: 285 ctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataaca 226
Query: 1085 ttagctgtgtttcctctcca 1104
|| || ||||||||||||||
Sbjct: 225 tttgcagtgtttcctctcca 206
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 597 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 538
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 537 gaaatgttgaacccacgatagag 515
>gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_H04 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 699
Score = 157 bits (79), Expect = 2e-036
Identities = 223/272 (81%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || ||||||| ||||||||| ||||||
Sbjct: 605 acatcaacaagcccattaaattgcctctccccncccttctnngcagccttgttatcatta 546
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 545 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 486
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 485 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 426
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 425 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 366
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 365 taacggataacatttgcagtgtttcctctcca 334
>gb|BQ634840.1|BQ634840 NXRV073_G10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV073_G10 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 683
Score = 157 bits (79), Expect = 2e-036
Identities = 201/242 (83%)
Strand = Plus / Minus
Query: 866 cccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatag 925
||||||||||||||| || |||||| |||| || || || || ||||||| ||||||
Sbjct: 572 cccttctttgcagccntgttatcattagccagccgagttcgagcatagtccaaagaataa 513
Query: 926 acaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccac 985
||||| | ||||| | |||||||| || |||||||| ||||| ||||||||||||||
Sbjct: 512 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 453
Query: 986 ttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaac 1045
|||||||| |||||| |||| ||||| || || || | | ||| |||| ||||||||||
Sbjct: 452 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 393
Query: 1046 gcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccac 1105
||||||||||| ||||| ||||| || |||||||||||||| || |||||||||||||||
Sbjct: 392 gcaaagttcaaagcctgagtgggaaaataacggatgacatttgcagtgtttcctctccac 333
Query: 1106 ag 1107
||
Sbjct: 332 ag 331
>gb|CN784669.1|CN784669 EST783360 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAAP06 5' end, mRNA sequence
Length = 892
Score = 157 bits (79), Expect = 2e-036
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 854 tgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtag 913
|||||||| || |||||||||||||||||| |||||| |||| || || || || |||
Sbjct: 878 tgcctctcccctcccttctttgcagccttgttatcattagccagccgagttcgagcatag 819
Query: 914 tccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagattt 973
|||| |||||| ||||| | ||||| | |||||||| || |||||||| ||||| |||
Sbjct: 818 tccaaagaataaacaaaaaggagagaagatgcaccagctgcaccaccagaggccaggttt 759
Query: 974 ccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaag 1033
||||||||||| |||||||| |||||| |||| ||||| || || || | | ||| |||
Sbjct: 758 ccagcaaaccatttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaag 699
Query: 1034 tgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtg 1093
| ||||||||||||||||||||| ||||| ||||| || |||||||| ||||| || |||
Sbjct: 698 taatccttgaacgcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtg 639
Query: 1094 tttcctctcca 1104
|||||||||||
Sbjct: 638 tttcctctcca 628
>gb|CF396995.1|CF396995 RTDS2_25_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_25_B08_A021 5', mRNA sequence
Length = 565
Score = 151 bits (76), Expect = 1e-034
Identities = 223/272 (81%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || || ||||||||||||||| ||||||
Sbjct: 562 acatcaacaagcccattaaattgcctctcccctcctttctttgcagccttgttatcatta 503
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| | || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 502 gccagcggagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 443
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 442 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 383
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 382 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 323
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 322 taacggataacatttgcagtgtttcctctcca 291
>gb|CO410705.1|CO410705 EST841090 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAL664 5' end, mRNA sequence
Length = 916
Score = 151 bits (76), Expect = 1e-034
Identities = 224/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||| ||| ||||||
Sbjct: 872 acatcaacaagcccattaaattgcctctcccctcccttctttgcagc-ttgttatcatta 814
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 813 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 754
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 753 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 694
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 693 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 634
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 633 taacggataacatttgcagtgtttcctctcca 602
>gb|CO414444.1|CO414444 EST844829 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone PIAMO40 5' end, mRNA sequence
Length = 881
Score = 151 bits (76), Expect = 1e-034
Identities = 224/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || || ||||||||||||||| ||||||
Sbjct: 872 acatcaacaagcccattaaattgcctctcccctcc-ttctttgcagccttgttatcatta 814
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 813 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 754
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 753 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 694
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 693 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 634
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 633 taacggataacatttgcagtgtttcctctcca 602
>gb|CV139145.1|CV139145 EST850354 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIBC27 5' end, mRNA sequence
Length = 861
Score = 151 bits (76), Expect = 1e-034
Identities = 224/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||| ||| ||||||
Sbjct: 860 acatcaacaagcccattaaattgcctctcccctcccttctttgcagc-ttgttatcatta 802
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 801 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 742
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 741 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 682
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 681 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 622
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 621 taacggataacatttgcagtgtttcctctcca 590
>gb|CV146533.1|CV146533 EST857742 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIDX48 5' end, mRNA sequence
Length = 945
Score = 151 bits (76), Expect = 1e-034
Identities = 224/272 (82%), Gaps = 1/272 (0%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||| ||| ||||||
Sbjct: 897 acatcaacaagcccattaaattgcctctcccctcccttctttgcagc-ttgttatcatta 839
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 838 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 779
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 778 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 719
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 718 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 659
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 658 taacggataacatttgcagtgtttcctctcca 627
>gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_F11 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 717
Score = 149 bits (75), Expect = 4e-034
Identities = 222/272 (81%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || | |||||||||||||| ||||||
Sbjct: 605 acatcaacaagcccattaaattgcctctcccctcnnntctttgcagccttgttatcatta 546
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 545 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 486
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 485 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 426
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 425 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 366
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 365 taacggataacatttgcagtgtttcctctcca 334
>gb|CV147199.1|CV147199 EST858408 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIE472 5' end, mRNA sequence
Length = 871
Score = 149 bits (75), Expect = 4e-034
Identities = 198/239 (82%)
Strand = Plus / Minus
Query: 866 cccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatag 925
|||||||||||||||||| |||||| |||| || || || || ||||||| ||||||
Sbjct: 865 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 806
Query: 926 acaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccac 985
||||| | ||||| | |||||||| || |||||||| ||||| ||||||||||||||
Sbjct: 805 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 746
Query: 986 ttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaac 1045
|||||||| |||||| |||| ||||| || || || | | ||| |||| ||||||||||
Sbjct: 745 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 686
Query: 1046 gcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctcca 1104
||||||||||| ||||| ||||| || |||||||| ||||| || ||||||||||||||
Sbjct: 685 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 627
>gb|DN465607.1|DN465607 EST961406 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIJS21 5' end, mRNA sequence
Length = 844
Score = 149 bits (75), Expect = 4e-034
Identities = 198/239 (82%)
Strand = Plus / Minus
Query: 866 cccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatag 925
|||||||||||||||||| |||||| |||| || || || || ||||||| ||||||
Sbjct: 841 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 782
Query: 926 acaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccac 985
||||| | ||||| | |||||||| || |||||||| ||||| ||||||||||||||
Sbjct: 781 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 722
Query: 986 ttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaac 1045
|||||||| |||||| |||| ||||| || || || | | ||| |||| ||||||||||
Sbjct: 721 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 662
Query: 1046 gcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctcca 1104
||||||||||| ||||| ||||| || |||||||| ||||| || ||||||||||||||
Sbjct: 661 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 603
>gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_D04_A029 5', mRNA sequence
Length = 674
Score = 147 bits (74), Expect = 2e-033
Identities = 209/254 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 257 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 198
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 197 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 138
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 137 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 78
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 77 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 18
Query: 1073 taacggatgacatt 1086
|||||||| |||||
Sbjct: 17 taacggataacatt 4
Score = 71.9 bits (36), Expect = 8e-011
Identities = 114/140 (81%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||| || || | ||| |||||||| ||||| || |||||||||||||| ||||||
Sbjct: 632 acaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgacttg 573
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||| || ||| ||||||||| || || || ||||| || || |||||||| || ||
Sbjct: 572 gcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgct 513
Query: 578 tcaccagatgtcatcatcat 597
||||| || |||||||||||
Sbjct: 512 tcaccggaagtcatcatcat 493
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 377 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 318
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 317 gaaatgttgaacccacgatagag 295
>gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A03 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 717
Score = 145 bits (73), Expect = 6e-033
Identities = 221/272 (81%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || | ||||||||||||| ||||||
Sbjct: 605 acatcaacaagcccattaaattgcctctccccncnnnnctttgcagccttgttatcatta 546
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 545 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 486
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 485 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 426
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 425 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 366
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 365 taacggataacatttgcagtgtttcctctcca 334
>gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_H12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 699
Score = 145 bits (73), Expect = 6e-033
Identities = 221/272 (81%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || | ||||||||||||| ||||||
Sbjct: 605 acatcaacaagcccattaaattgcctctccccncnnnnctttgcagccttgttatcatta 546
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 545 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 486
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 485 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 426
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 425 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 366
Query: 1073 taacggatgacattagctgtgtttcctctcca 1104
|||||||| ||||| || ||||||||||||||
Sbjct: 365 taacggataacatttgcagtgtttcctctcca 334
>gb|CO370474.1|CO370474 RTK1_68_D04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_68_D04_A029 3', mRNA sequence
Length = 856
Score = 145 bits (73), Expect = 6e-033
Identities = 192/232 (82%)
Strand = Plus / Plus
Query: 873 ttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaaga 932
||||||||||| |||||| |||| || || || || ||||||| |||||| ||||| |
Sbjct: 1 ttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataaacaaaaa 60
Query: 933 atagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagt 992
|||||| | |||||||| || |||||||| ||||| |||||||||||||| |||||||
Sbjct: 61 ggagagagnatgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagt 120
Query: 993 acccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagt 1052
| |||||| |||| ||||| || || || | | ||| |||| |||||||||||||||||
Sbjct: 121 aaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagt 180
Query: 1053 tcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctcca 1104
|||| ||||| ||||| || |||||||| ||||| || ||||||||||||||
Sbjct: 181 tcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 232
>gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 580
Score = 143 bits (72), Expect = 3e-032
Identities = 204/248 (82%)
Strand = Plus / Minus
Query: 833 acatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattg 892
|||||||| || ||||| || |||||||| || |||||||||||||||||| ||||||
Sbjct: 251 acatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcatta 192
Query: 893 gccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagca 952
|||| || || || || ||||||| |||||| ||||| | ||||| | ||||||||
Sbjct: 191 gccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccagct 132
Query: 953 gctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttctta 1012
|| |||||||| ||||| |||||||||||||| |||||||| |||||| |||| |||||
Sbjct: 131 gcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttcttg 72
Query: 1013 aagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaag 1072
|| || || | | ||| |||| ||||||||||||||||||||| ||||| ||||| ||
Sbjct: 71 aaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaaaa 12
Query: 1073 taacggat 1080
||||||||
Sbjct: 11 taacggat 4
Score = 46.1 bits (23), Expect = 0.004
Identities = 74/91 (81%)
Strand = Plus / Minus
Query: 507 agagggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgt 566
|||| ||||||| ||| || ||| ||||||||| || || || ||||| || || ||||
Sbjct: 577 agagtgacttggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgt 518
Query: 567 acttgacggcctcaccagatgtcatcatcat 597
|||| || |||||||| || |||||||||||
Sbjct: 517 acttaactgcctcaccggaagtcatcatcat 487
Score = 46.1 bits (23), Expect = 0.004
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
|||||||| || |||||||| |||||||| | ||| || || || || || |||||||||
Sbjct: 371 ggcttcagagaatcatacattccaaagtataaaccacgatagactataattcccacacaa 312
Query: 773 gatatattgaatccacggtagag 795
|| || ||||| ||||| |||||
Sbjct: 311 gaaatgttgaacccacgatagag 289
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 158,299
Number of Sequences: 355925
Number of extensions: 158299
Number of successful extensions: 43333
Number of sequences better than 0.5: 306
Number of HSP's better than 0.5 without gapping: 304
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 42383
Number of HSP's gapped (non-prelim): 801
length of query: 1589
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1569
effective length of database: 210,158,737
effective search space: 329739058353
effective search space used: 329739058353
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)