BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.355
(842 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF389508.1|CF389508 RTDR2_8_H08.b1_A021 Loblolly pine ro... 196 1e-048
gb|CO201907.1|CO201907 RTCNT2_8_H07.g1_A029 Root control 2 ... 188 3e-046
gb|CO167012.1|CO167012 FLD1_66_D11.b1_A029 Root flooded Pin... 172 1e-041
gb|CO167079.1|CO167079 FLD1_66_D11.g1_A029 Root flooded Pin... 172 1e-041
gb|CO176667.1|CO176667 NDL1_63_A10.g1_A029 Needles control ... 172 1e-041
gb|DR013528.1|DR013528 HEAT1_19_H03.g1_A029 Root at 37 C fo... 172 1e-041
gb|DR016955.1|DR016955 STRS1_13_E03.b1_A034 Shoot tip pitch... 172 1e-041
gb|DR017037.1|DR017037 STRS1_13_E03.g1_A034 Shoot tip pitch... 172 1e-041
gb|DR053982.1|DR053982 RTCA1_14_B10.g1_A029 Roots minus cal... 172 1e-041
gb|DR092417.1|DR092417 STRR1_1_F09.b1_A033 Stem Response Re... 172 1e-041
gb|DR092504.1|DR092504 STRR1_1_F09.g1_A033 Stem Response Re... 172 1e-041
gb|CV137672.1|CV137672 EST848881 Sequencing ESTs from loblo... 168 2e-040
gb|CO199034.1|CO199034 GEO1_18_G06.b1_A029 Root gravitropis... 167 9e-040
gb|CO199101.1|CO199101 GEO1_18_G06.g1_A029 Root gravitropis... 167 9e-040
gb|CX647392.1|CX647392 COLD1_16_B07.b1_A029 Root cold Pinus... 167 9e-040
gb|DR177585.1|DR177585 RTMNUT1_6_E04.b1_A029 Roots minus mi... 167 9e-040
gb|DR177666.1|DR177666 RTMNUT1_6_E04.g1_A029 Roots minus mi... 167 9e-040
gb|CF471563.1|CF471563 RTDS1_4_H08.b1_A015 Drought-stressed... 165 4e-039
gb|BQ699016.1|BQ699016 NXRV118_D05_F NXRV (Nsf Xylem Root w... 159 2e-037
gb|CO363452.1|CO363452 RTK1_9_G05.g1_A029 Roots minus potas... 159 2e-037
gb|CO366760.1|CO366760 RTK1_29_H07.g1_A029 Roots minus pota... 159 2e-037
gb|DR013443.1|DR013443 HEAT1_19_H03.b1_A029 Root at 37 C fo... 159 2e-037
gb|BG040104.1|BG040104 NXSI_106_D08_F NXSI (Nsf Xylem Side ... 155 3e-036
gb|BQ654550.1|BQ654550 NXRV082_B07_F NXRV (Nsf Xylem Root w... 151 5e-035
gb|CX645287.1|CX645287 COLD1_1_E08.g1_A029 Root cold Pinus ... 151 5e-035
gb|CX645872.1|CX645872 COLD1_5_F12.g1_A029 Root cold Pinus ... 151 5e-035
gb|CX647350.1|CX647350 COLD1_15_B05.g1_A029 Root cold Pinus... 151 5e-035
gb|DR161066.1|DR161066 RTFE1_9_D10.g1_A029 Roots minus iron... 151 5e-035
gb|DR387694.1|DR387694 RTHG1_23_B07.g2_A029 Roots plus adde... 151 5e-035
gb|CX651520.1|CX651520 COLD1_53_A06.b1_A029 Root cold Pinus... 147 9e-034
gb|CX651588.1|CX651588 COLD1_53_A06.g1_A029 Root cold Pinus... 147 9e-034
gb|DN462244.1|DN462244 EST958043 Sequencing ESTs from loblo... 147 9e-034
gb|DT626962.1|DT626962 EST1160038 Sequencing ESTs from lobl... 147 9e-034
emb|AJ297301.1|PPI297301 Pinus pinaster partial mRNA for hi... 147 9e-034
gb|BG039972.1|BG039972 NXSI_104_C03_F NXSI (Nsf Xylem Side ... 145 3e-033
gb|DR053904.1|DR053904 RTCA1_14_B10.b1_A029 Roots minus cal... 145 3e-033
gb|DR165980.1|DR165980 RTPHOS1_8_C01.g1_A029 Roots minus ph... 145 3e-033
gb|DR385392.1|DR385392 RTHG1_8_H08.b1_A029 Roots plus added... 145 3e-033
gb|DR385480.1|DR385480 RTHG1_8_H08.g1_A029 Roots plus added... 145 3e-033
gb|BX249979.1|BX249979 BX249979 Pinus pinaster differenciat... 143 1e-032
gb|BX252133.1|BX252133 BX252133 Pinus pinaster differenciat... 143 1e-032
gb|CF399667.1|CF399667 RTDS3_25_C03.b1_A022 Drought-stresse... 143 1e-032
gb|CF399704.1|CF399704 RTDS3_25_C03.g1_A022 Drought-stresse... 143 1e-032
gb|CF400555.1|CF400555 RTWW1_6_D06.b1_A015 Well-watered lob... 143 1e-032
gb|CF401140.1|CF401140 RTWW1_10_E06.g1_A015 Well-watered lo... 143 1e-032
gb|CF401415.1|CF401415 RTWW1_12_G07.g1_A015 Well-watered lo... 143 1e-032
gb|CF401878.1|CF401878 RTWW1_15_A12.g1_A015 Well-watered lo... 143 1e-032
gb|CF402610.1|CF402610 RTWW1_21_B09.g1_A015 Well-watered lo... 143 1e-032
gb|CF402871.1|CF402871 RTWW1_23_A01.g1_A015 Well-watered lo... 143 1e-032
gb|CF471021.1|CF471021 RTDS1_16_F12.b1_A015 Drought-stresse... 143 1e-032
gb|CF471149.1|CF471149 RTDS1_16_F12.g1_A015 Drought-stresse... 143 1e-032
gb|CF471941.1|CF471941 RTDS1_7_D08.g1_A015 Drought-stressed... 143 1e-032
gb|CF471970.1|CF471970 RTDS1_7_A04.g1_A015 Drought-stressed... 143 1e-032
gb|CF472930.1|CF472930 RTDS1_12_F10.g1_A015 Drought-stresse... 143 1e-032
gb|CF475861.1|CF475861 RTWW2_15_E07.g1_A021 Well-watered lo... 143 1e-032
gb|CF668538.1|CF668538 RTCNT1_37_D07.b1_A029 Root control P... 143 1e-032
gb|CN783773.1|CN783773 EST782464 Sequencing ESTs from loblo... 143 1e-032
gb|CN783789.1|CN783789 EST782480 Sequencing ESTs from loblo... 143 1e-032
gb|CN785256.1|CN785256 EST783947 Sequencing ESTs from loblo... 143 1e-032
gb|CN785423.1|CN785423 EST784114 Sequencing ESTs from loblo... 143 1e-032
gb|CN785998.1|CN785998 EST784689 Sequencing ESTs from loblo... 143 1e-032
gb|CO408997.1|CO408997 EST839382 Sequencing ESTs from loblo... 143 1e-032
gb|CO409244.1|CO409244 EST839629 Sequencing ESTs from loblo... 143 1e-032
gb|CO409475.1|CO409475 EST839860 Sequencing ESTs from loblo... 143 1e-032
gb|CO409689.1|CO409689 EST840074 Sequencing ESTs from loblo... 143 1e-032
gb|CO409791.1|CO409791 EST840176 Sequencing ESTs from loblo... 143 1e-032
gb|CO410025.1|CO410025 EST840410 Sequencing ESTs from loblo... 143 1e-032
gb|CO411317.1|CO411317 EST841702 Sequencing ESTs from loblo... 143 1e-032
gb|CO412038.1|CO412038 EST842423 Sequencing ESTs from loblo... 143 1e-032
gb|CO412184.1|CO412184 EST842569 Sequencing ESTs from loblo... 143 1e-032
gb|CO413178.1|CO413178 EST843563 Sequencing ESTs from loblo... 143 1e-032
gb|CO413520.1|CO413520 EST843905 Sequencing ESTs from loblo... 143 1e-032
gb|CO413830.1|CO413830 EST844215 Sequencing ESTs from loblo... 143 1e-032
gb|CO414364.1|CO414364 EST844749 Sequencing ESTs from loblo... 143 1e-032
gb|CO414403.1|CO414403 EST844788 Sequencing ESTs from loblo... 143 1e-032
gb|CO414514.1|CO414514 EST844899 Sequencing ESTs from loblo... 143 1e-032
gb|CO363367.1|CO363367 RTK1_9_G05.b1_A029 Roots minus potas... 143 1e-032
gb|CV035191.1|CV035191 RTNACL1_14_G06.b1_A029 Roots plus ad... 143 1e-032
gb|CV035256.1|CV035256 RTNACL1_14_G06.g1_A029 Roots plus ad... 143 1e-032
gb|CV133985.1|CV133985 EST845194 Sequencing ESTs from loblo... 143 1e-032
gb|CV135262.1|CV135262 EST846471 Sequencing ESTs from loblo... 143 1e-032
gb|CV135308.1|CV135308 EST846517 Sequencing ESTs from loblo... 143 1e-032
gb|CV136616.1|CV136616 EST847825 Sequencing ESTs from loblo... 143 1e-032
gb|CV136642.1|CV136642 EST847851 Sequencing ESTs from loblo... 143 1e-032
gb|CV136763.1|CV136763 EST847972 Sequencing ESTs from loblo... 143 1e-032
gb|CV136842.1|CV136842 EST848051 Sequencing ESTs from loblo... 143 1e-032
gb|CV137104.1|CV137104 EST848313 Sequencing ESTs from loblo... 143 1e-032
gb|CV137208.1|CV137208 EST848417 Sequencing ESTs from loblo... 143 1e-032
gb|CV137556.1|CV137556 EST848765 Sequencing ESTs from loblo... 143 1e-032
gb|CV137626.1|CV137626 EST848835 Sequencing ESTs from loblo... 143 1e-032
gb|CV137633.1|CV137633 EST848842 Sequencing ESTs from loblo... 143 1e-032
gb|CV137850.1|CV137850 EST849059 Sequencing ESTs from loblo... 143 1e-032
gb|CV138240.1|CV138240 EST849449 Sequencing ESTs from loblo... 143 1e-032
gb|CV138272.1|CV138272 EST849481 Sequencing ESTs from loblo... 143 1e-032
gb|CV138557.1|CV138557 EST849766 Sequencing ESTs from loblo... 143 1e-032
gb|CV138561.1|CV138561 EST849770 Sequencing ESTs from loblo... 143 1e-032
gb|CV138574.1|CV138574 EST849783 Sequencing ESTs from loblo... 143 1e-032
gb|CV138693.1|CV138693 EST849902 Sequencing ESTs from loblo... 143 1e-032
gb|CV139079.1|CV139079 EST850288 Sequencing ESTs from loblo... 143 1e-032
gb|CV139222.1|CV139222 EST850431 Sequencing ESTs from loblo... 143 1e-032
gb|CV143366.1|CV143366 EST854575 Sequencing ESTs from loblo... 143 1e-032
gb|CV143777.1|CV143777 EST854986 Sequencing ESTs from loblo... 143 1e-032
gb|CV143792.1|CV143792 EST855001 Sequencing ESTs from loblo... 143 1e-032
gb|CV144011.1|CV144011 EST855220 Sequencing ESTs from loblo... 143 1e-032
gb|CV144612.1|CV144612 EST855821 Sequencing ESTs from loblo... 143 1e-032
gb|CV144628.1|CV144628 EST855837 Sequencing ESTs from loblo... 143 1e-032
gb|CV144705.1|CV144705 EST855914 Sequencing ESTs from loblo... 143 1e-032
gb|CV144771.1|CV144771 EST855980 Sequencing ESTs from loblo... 143 1e-032
gb|CV145684.1|CV145684 EST856893 Sequencing ESTs from loblo... 143 1e-032
gb|CV145752.1|CV145752 EST856961 Sequencing ESTs from loblo... 143 1e-032
gb|CV146207.1|CV146207 EST857416 Sequencing ESTs from loblo... 143 1e-032
gb|CV146365.1|CV146365 EST857574 Sequencing ESTs from loblo... 143 1e-032
gb|CV146602.1|CV146602 EST857811 Sequencing ESTs from loblo... 143 1e-032
gb|CV146823.1|CV146823 EST858032 Sequencing ESTs from loblo... 143 1e-032
gb|CV147029.1|CV147029 EST858238 Sequencing ESTs from loblo... 143 1e-032
gb|CV147048.1|CV147048 EST858257 Sequencing ESTs from loblo... 143 1e-032
gb|CV147313.1|CV147313 EST858522 Sequencing ESTs from loblo... 143 1e-032
gb|CV147336.1|CV147336 EST858545 Sequencing ESTs from loblo... 143 1e-032
gb|CV147548.1|CV147548 EST858757 Sequencing ESTs from loblo... 143 1e-032
gb|CV148015.1|CV148015 EST859224 Sequencing ESTs from loblo... 143 1e-032
gb|CV148064.1|CV148064 EST859273 Sequencing ESTs from loblo... 143 1e-032
gb|CV148499.1|CV148499 EST859708 Sequencing ESTs from loblo... 143 1e-032
gb|CV148642.1|CV148642 EST859851 Sequencing ESTs from loblo... 143 1e-032
gb|CX650884.1|CX650884 COLD1_48_F03.g1_A029 Root cold Pinus... 143 1e-032
gb|DN445232.1|DN445232 EST941031 Sequencing ESTs from loblo... 143 1e-032
gb|DN445593.1|DN445593 EST941392 Sequencing ESTs from loblo... 143 1e-032
gb|DN445870.1|DN445870 EST941669 Sequencing ESTs from loblo... 143 1e-032
gb|DN446104.1|DN446104 EST941903 Sequencing ESTs from loblo... 143 1e-032
gb|DN446113.1|DN446113 EST941912 Sequencing ESTs from loblo... 143 1e-032
gb|DN446170.1|DN446170 EST941969 Sequencing ESTs from loblo... 143 1e-032
gb|DN446819.1|DN446819 EST942618 Sequencing ESTs from loblo... 143 1e-032
gb|DN447061.1|DN447061 EST942860 Sequencing ESTs from loblo... 143 1e-032
gb|DN447421.1|DN447421 EST943220 Sequencing ESTs from loblo... 143 1e-032
gb|DN447626.1|DN447626 EST943425 Sequencing ESTs from loblo... 143 1e-032
gb|DN448026.1|DN448026 EST943825 Sequencing ESTs from loblo... 143 1e-032
gb|DN448277.1|DN448277 EST944076 Sequencing ESTs from loblo... 143 1e-032
gb|DN448493.1|DN448493 EST944292 Sequencing ESTs from loblo... 143 1e-032
gb|DN449269.1|DN449269 EST945068 Sequencing ESTs from loblo... 143 1e-032
gb|DN449773.1|DN449773 EST945572 Sequencing ESTs from loblo... 143 1e-032
gb|DN449899.1|DN449899 EST945698 Sequencing ESTs from loblo... 143 1e-032
gb|DN449981.1|DN449981 EST945780 Sequencing ESTs from loblo... 143 1e-032
gb|DN450563.1|DN450563 EST946362 Sequencing ESTs from loblo... 143 1e-032
gb|DN450710.1|DN450710 EST946509 Sequencing ESTs from loblo... 143 1e-032
gb|DN450742.1|DN450742 EST946541 Sequencing ESTs from loblo... 143 1e-032
gb|DN450850.1|DN450850 EST946649 Sequencing ESTs from loblo... 143 1e-032
gb|DN451266.1|DN451266 EST947065 Sequencing ESTs from loblo... 143 1e-032
gb|DN452249.1|DN452249 EST948048 Sequencing ESTs from loblo... 143 1e-032
gb|DN453000.1|DN453000 EST948799 Sequencing ESTs from loblo... 143 1e-032
gb|DN453668.1|DN453668 EST949467 Sequencing ESTs from loblo... 143 1e-032
gb|DN453731.1|DN453731 EST949530 Sequencing ESTs from loblo... 143 1e-032
gb|DN453854.1|DN453854 EST949653 Sequencing ESTs from loblo... 143 1e-032
gb|DN454140.1|DN454140 EST949939 Sequencing ESTs from loblo... 143 1e-032
gb|DN454559.1|DN454559 EST950358 Sequencing ESTs from loblo... 143 1e-032
gb|DN454832.1|DN454832 EST950631 Sequencing ESTs from loblo... 143 1e-032
gb|DN454876.1|DN454876 EST950675 Sequencing ESTs from loblo... 143 1e-032
gb|DN455093.1|DN455093 EST950892 Sequencing ESTs from loblo... 143 1e-032
gb|DN455115.1|DN455115 EST950914 Sequencing ESTs from loblo... 143 1e-032
gb|DN455184.1|DN455184 EST950983 Sequencing ESTs from loblo... 143 1e-032
gb|DN455318.1|DN455318 EST951117 Sequencing ESTs from loblo... 143 1e-032
gb|DN455717.1|DN455717 EST951516 Sequencing ESTs from loblo... 143 1e-032
gb|DN455777.1|DN455777 EST951576 Sequencing ESTs from loblo... 143 1e-032
gb|DN456071.1|DN456071 EST951870 Sequencing ESTs from loblo... 143 1e-032
gb|DN456095.1|DN456095 EST951894 Sequencing ESTs from loblo... 143 1e-032
gb|DN456166.1|DN456166 EST951965 Sequencing ESTs from loblo... 143 1e-032
gb|DN456687.1|DN456687 EST952486 Sequencing ESTs from loblo... 143 1e-032
gb|DN457337.1|DN457337 EST953136 Sequencing ESTs from loblo... 143 1e-032
gb|DN457618.1|DN457618 EST953417 Sequencing ESTs from loblo... 143 1e-032
gb|DN457648.1|DN457648 EST953447 Sequencing ESTs from loblo... 143 1e-032
gb|DN458561.1|DN458561 EST954360 Sequencing ESTs from loblo... 143 1e-032
gb|DN458695.1|DN458695 EST954494 Sequencing ESTs from loblo... 143 1e-032
gb|DN458861.1|DN458861 EST954660 Sequencing ESTs from loblo... 143 1e-032
gb|DN458908.1|DN458908 EST954707 Sequencing ESTs from loblo... 143 1e-032
gb|DN459254.1|DN459254 EST955053 Sequencing ESTs from loblo... 143 1e-032
gb|DN459390.1|DN459390 EST955189 Sequencing ESTs from loblo... 143 1e-032
gb|DN459484.1|DN459484 EST955283 Sequencing ESTs from loblo... 143 1e-032
gb|DN459489.1|DN459489 EST955288 Sequencing ESTs from loblo... 143 1e-032
gb|DN459640.1|DN459640 EST955439 Sequencing ESTs from loblo... 143 1e-032
gb|DN459822.1|DN459822 EST955621 Sequencing ESTs from loblo... 143 1e-032
gb|DN460474.1|DN460474 EST956273 Sequencing ESTs from loblo... 143 1e-032
gb|DN460667.1|DN460667 EST956466 Sequencing ESTs from loblo... 143 1e-032
gb|DN460789.1|DN460789 EST956588 Sequencing ESTs from loblo... 143 1e-032
gb|DN460857.1|DN460857 EST956656 Sequencing ESTs from loblo... 143 1e-032
gb|DN460982.1|DN460982 EST956781 Sequencing ESTs from loblo... 143 1e-032
gb|DN461036.1|DN461036 EST956835 Sequencing ESTs from loblo... 143 1e-032
gb|DN461352.1|DN461352 EST957151 Sequencing ESTs from loblo... 143 1e-032
gb|DN461411.1|DN461411 EST957210 Sequencing ESTs from loblo... 143 1e-032
gb|DN461472.1|DN461472 EST957271 Sequencing ESTs from loblo... 143 1e-032
gb|DN461605.1|DN461605 EST957404 Sequencing ESTs from loblo... 143 1e-032
gb|DN461904.1|DN461904 EST957703 Sequencing ESTs from loblo... 143 1e-032
gb|DN461923.1|DN461923 EST957722 Sequencing ESTs from loblo... 143 1e-032
gb|DN461963.1|DN461963 EST957762 Sequencing ESTs from loblo... 143 1e-032
gb|DN462506.1|DN462506 EST958305 Sequencing ESTs from loblo... 143 1e-032
gb|DN462700.1|DN462700 EST958499 Sequencing ESTs from loblo... 143 1e-032
gb|DN463456.1|DN463456 EST959255 Sequencing ESTs from loblo... 143 1e-032
gb|DN463463.1|DN463463 EST959262 Sequencing ESTs from loblo... 143 1e-032
gb|DN463716.1|DN463716 EST959515 Sequencing ESTs from loblo... 143 1e-032
gb|DN463761.1|DN463761 EST959560 Sequencing ESTs from loblo... 143 1e-032
gb|DN464425.1|DN464425 EST960224 Sequencing ESTs from loblo... 143 1e-032
gb|DN464698.1|DN464698 EST960497 Sequencing ESTs from loblo... 143 1e-032
gb|DN464699.1|DN464699 EST960498 Sequencing ESTs from loblo... 143 1e-032
gb|DN465364.1|DN465364 EST961163 Sequencing ESTs from loblo... 143 1e-032
gb|DN465385.1|DN465385 EST961184 Sequencing ESTs from loblo... 143 1e-032
gb|DN611824.1|DN611824 EST964874 Subtracted pine embryo lib... 143 1e-032
gb|DN611979.1|DN611979 EST965029 Subtracted pine embryo lib... 143 1e-032
gb|DN612174.1|DN612174 EST965224 Subtracted pine embryo lib... 143 1e-032
gb|DR012662.1|DR012662 HEAT1_14_F05.b1_A029 Root at 37 C fo... 143 1e-032
gb|DR012851.1|DR012851 HEAT1_15_H08.b1_A029 Root at 37 C fo... 143 1e-032
gb|DR012926.1|DR012926 HEAT1_15_H08.g1_A029 Root at 37 C fo... 143 1e-032
gb|DR019622.1|DR019622 STRS1_31_G01.b1_A034 Shoot tip pitch... 143 1e-032
gb|DR047605.1|DR047605 RTBOR1_2_E08.b1_A029 Roots plus adde... 143 1e-032
gb|DR056617.1|DR056617 RTCA1_31_A10.g1_A029 Roots minus cal... 143 1e-032
gb|DR059878.1|DR059878 RTNIT1_20_G09.b1_A029 Roots minus ni... 143 1e-032
gb|DR059967.1|DR059967 RTNIT1_20_G09.g1_A029 Roots minus ni... 143 1e-032
gb|DR068903.1|DR068903 RTDK1_3_C08.g1_A029 Roots, dark Pinu... 143 1e-032
gb|DR097008.1|DR097008 STRR1_31_G06.g1_A033 Stem Response R... 143 1e-032
gb|DR744402.1|DR744402 RTCU1_22_E12.b1_A029 Roots plus adde... 143 1e-032
gb|DT626378.1|DT626378 EST1158302 Sequencing ESTs from lobl... 143 1e-032
gb|DT624801.1|DT624801 EST1159076 Sequencing ESTs from lobl... 143 1e-032
gb|CF390210.1|CF390210 RTDR2_18_B11.b1_A021 Loblolly pine r... 139 2e-031
gb|CF390356.1|CF390356 RTDR2_18_B11.g1_A021 Loblolly pine r... 139 2e-031
gb|DR019697.1|DR019697 STRS1_31_G01.g1_A034 Shoot tip pitch... 139 2e-031
gb|DR091093.1|DR091093 RTAL1_19_G11.b1_A029 Roots plus adde... 139 2e-031
gb|DR091173.1|DR091173 RTAL1_19_G11.g1_A029 Roots plus adde... 139 2e-031
gb|BG039513.1|BG039513 NXSI_099_H01_F NXSI (Nsf Xylem Side ... 137 8e-031
gb|BX254204.1|BX254204 BX254204 Pinus pinaster differenciat... 135 3e-030
gb|CF398958.1|CF398958 RTDS3_11_F10.g1_A022 Drought-stresse... 135 3e-030
gb|CF472898.1|CF472898 RTDS1_12_A12.g1_A015 Drought-stresse... 135 3e-030
gb|CR354721.1|CR354721 CR354721 Pinus pinaster differenciat... 135 3e-030
gb|CN783840.1|CN783840 EST782531 Sequencing ESTs from loblo... 135 3e-030
gb|CN784299.1|CN784299 EST782990 Sequencing ESTs from loblo... 135 3e-030
gb|CN784399.1|CN784399 EST783090 Sequencing ESTs from loblo... 135 3e-030
gb|CN784868.1|CN784868 EST783559 Sequencing ESTs from loblo... 135 3e-030
gb|CN785094.1|CN785094 EST783785 Sequencing ESTs from loblo... 135 3e-030
gb|CN785318.1|CN785318 EST784009 Sequencing ESTs from loblo... 135 3e-030
gb|CN785374.1|CN785374 EST784065 Sequencing ESTs from loblo... 135 3e-030
gb|CO174160.1|CO174160 NDL1_42_D09.b1_A029 Needles control ... 135 3e-030
gb|CO174231.1|CO174231 NDL1_42_D09.g1_A029 Needles control ... 135 3e-030
gb|CO409002.1|CO409002 EST839387 Sequencing ESTs from loblo... 135 3e-030
gb|CO409362.1|CO409362 EST839747 Sequencing ESTs from loblo... 135 3e-030
gb|CO409878.1|CO409878 EST840263 Sequencing ESTs from loblo... 135 3e-030
gb|CO412296.1|CO412296 EST842681 Sequencing ESTs from loblo... 135 3e-030
gb|CO412445.1|CO412445 EST842830 Sequencing ESTs from loblo... 135 3e-030
gb|CO413261.1|CO413261 EST843646 Sequencing ESTs from loblo... 135 3e-030
gb|CO413756.1|CO413756 EST844141 Sequencing ESTs from loblo... 135 3e-030
gb|CO414079.1|CO414079 EST844464 Sequencing ESTs from loblo... 135 3e-030
gb|CO414103.1|CO414103 EST844488 Sequencing ESTs from loblo... 135 3e-030
gb|CO414137.1|CO414137 EST844522 Sequencing ESTs from loblo... 135 3e-030
gb|CO414352.1|CO414352 EST844737 Sequencing ESTs from loblo... 135 3e-030
gb|CO414511.1|CO414511 EST844896 Sequencing ESTs from loblo... 135 3e-030
gb|CV031442.1|CV031442 RTNACL1_1_D03.g1_A029 Roots plus add... 135 3e-030
gb|CV136275.1|CV136275 EST847484 Sequencing ESTs from loblo... 135 3e-030
gb|CV136277.1|CV136277 EST847486 Sequencing ESTs from loblo... 135 3e-030
gb|CV136815.1|CV136815 EST848024 Sequencing ESTs from loblo... 135 3e-030
gb|CV137039.1|CV137039 EST848248 Sequencing ESTs from loblo... 135 3e-030
gb|CV137422.1|CV137422 EST848631 Sequencing ESTs from loblo... 135 3e-030
gb|CV138968.1|CV138968 EST850177 Sequencing ESTs from loblo... 135 3e-030
gb|CV143759.1|CV143759 EST854968 Sequencing ESTs from loblo... 135 3e-030
gb|CV143891.1|CV143891 EST855100 Sequencing ESTs from loblo... 135 3e-030
gb|CV143900.1|CV143900 EST855109 Sequencing ESTs from loblo... 135 3e-030
gb|CV144968.1|CV144968 EST856177 Sequencing ESTs from loblo... 135 3e-030
gb|CV145541.1|CV145541 EST856750 Sequencing ESTs from loblo... 135 3e-030
gb|CV145698.1|CV145698 EST856907 Sequencing ESTs from loblo... 135 3e-030
gb|CV146037.1|CV146037 EST857246 Sequencing ESTs from loblo... 135 3e-030
gb|CV146317.1|CV146317 EST857526 Sequencing ESTs from loblo... 135 3e-030
gb|CV146689.1|CV146689 EST857898 Sequencing ESTs from loblo... 135 3e-030
gb|CV146696.1|CV146696 EST857905 Sequencing ESTs from loblo... 135 3e-030
gb|CV147303.1|CV147303 EST858512 Sequencing ESTs from loblo... 135 3e-030
gb|CV147462.1|CV147462 EST858671 Sequencing ESTs from loblo... 135 3e-030
gb|CV147727.1|CV147727 EST858936 Sequencing ESTs from loblo... 135 3e-030
gb|CV148661.1|CV148661 EST859870 Sequencing ESTs from loblo... 135 3e-030
gb|CV148730.1|CV148730 EST859939 Sequencing ESTs from loblo... 135 3e-030
gb|CX645783.1|CX645783 COLD1_5_F12.b1_A029 Root cold Pinus ... 135 3e-030
gb|CX646623.1|CX646623 COLD1_10_A12.g1_A029 Root cold Pinus... 135 3e-030
gb|CX652077.1|CX652077 COLD1_56_F12.g1_A029 Root cold Pinus... 135 3e-030
gb|DN445188.1|DN445188 EST940987 Sequencing ESTs from loblo... 135 3e-030
gb|DN445376.1|DN445376 EST941175 Sequencing ESTs from loblo... 135 3e-030
gb|DN445427.1|DN445427 EST941226 Sequencing ESTs from loblo... 135 3e-030
gb|DN445868.1|DN445868 EST941667 Sequencing ESTs from loblo... 135 3e-030
gb|DN447593.1|DN447593 EST943392 Sequencing ESTs from loblo... 135 3e-030
gb|DN447882.1|DN447882 EST943681 Sequencing ESTs from loblo... 135 3e-030
gb|DN448116.1|DN448116 EST943915 Sequencing ESTs from loblo... 135 3e-030
gb|DN448161.1|DN448161 EST943960 Sequencing ESTs from loblo... 135 3e-030
gb|DN449936.1|DN449936 EST945735 Sequencing ESTs from loblo... 135 3e-030
gb|DN450488.1|DN450488 EST946287 Sequencing ESTs from loblo... 135 3e-030
gb|DN450788.1|DN450788 EST946587 Sequencing ESTs from loblo... 135 3e-030
gb|DN450819.1|DN450819 EST946618 Sequencing ESTs from loblo... 135 3e-030
gb|DN450826.1|DN450826 EST946625 Sequencing ESTs from loblo... 135 3e-030
gb|DN450934.1|DN450934 EST946733 Sequencing ESTs from loblo... 135 3e-030
gb|DN453621.1|DN453621 EST949420 Sequencing ESTs from loblo... 135 3e-030
gb|DN453812.1|DN453812 EST949611 Sequencing ESTs from loblo... 135 3e-030
gb|DN454288.1|DN454288 EST950087 Sequencing ESTs from loblo... 135 3e-030
gb|DN454341.1|DN454341 EST950140 Sequencing ESTs from loblo... 135 3e-030
gb|DN454445.1|DN454445 EST950244 Sequencing ESTs from loblo... 135 3e-030
gb|DN454739.1|DN454739 EST950538 Sequencing ESTs from loblo... 135 3e-030
gb|DN455944.1|DN455944 EST951743 Sequencing ESTs from loblo... 135 3e-030
gb|DN455960.1|DN455960 EST951759 Sequencing ESTs from loblo... 135 3e-030
gb|DN456093.1|DN456093 EST951892 Sequencing ESTs from loblo... 135 3e-030
gb|DN456384.1|DN456384 EST952183 Sequencing ESTs from loblo... 135 3e-030
gb|DN457642.1|DN457642 EST953441 Sequencing ESTs from loblo... 135 3e-030
gb|DN458345.1|DN458345 EST954144 Sequencing ESTs from loblo... 135 3e-030
gb|DN458459.1|DN458459 EST954258 Sequencing ESTs from loblo... 135 3e-030
gb|DN458563.1|DN458563 EST954362 Sequencing ESTs from loblo... 135 3e-030
gb|DN458939.1|DN458939 EST954738 Sequencing ESTs from loblo... 135 3e-030
gb|DN459685.1|DN459685 EST955484 Sequencing ESTs from loblo... 135 3e-030
gb|DN459733.1|DN459733 EST955532 Sequencing ESTs from loblo... 135 3e-030
gb|DN460219.1|DN460219 EST956018 Sequencing ESTs from loblo... 135 3e-030
gb|DN460333.1|DN460333 EST956132 Sequencing ESTs from loblo... 135 3e-030
gb|DN460565.1|DN460565 EST956364 Sequencing ESTs from loblo... 135 3e-030
gb|DN460752.1|DN460752 EST956551 Sequencing ESTs from loblo... 135 3e-030
gb|DN461087.1|DN461087 EST956886 Sequencing ESTs from loblo... 135 3e-030
gb|DN461268.1|DN461268 EST957067 Sequencing ESTs from loblo... 135 3e-030
gb|DN461536.1|DN461536 EST957335 Sequencing ESTs from loblo... 135 3e-030
gb|DN461601.1|DN461601 EST957400 Sequencing ESTs from loblo... 135 3e-030
gb|DN461871.1|DN461871 EST957670 Sequencing ESTs from loblo... 135 3e-030
gb|DN462362.1|DN462362 EST958161 Sequencing ESTs from loblo... 135 3e-030
gb|DN463105.1|DN463105 EST958904 Sequencing ESTs from loblo... 135 3e-030
gb|DN463465.1|DN463465 EST959264 Sequencing ESTs from loblo... 135 3e-030
gb|DN463735.1|DN463735 EST959534 Sequencing ESTs from loblo... 135 3e-030
gb|DN611703.1|DN611703 EST964753 Subtracted pine embryo lib... 135 3e-030
gb|DR051025.1|DR051025 RTBOR1_27_E07.b1_A029 Roots plus add... 135 3e-030
gb|DR097891.1|DR097891 STRR1_37_F01.g1_A033 Stem Response R... 135 3e-030
gb|DR100970.1|DR100970 STRR1_69_D06.g1_A033 Stem Response R... 135 3e-030
gb|DR112980.1|DR112980 RTS1_32_D01.b1_A029 Roots minus sulf... 135 3e-030
gb|DR113044.1|DR113044 RTS1_32_D01.g1_A029 Roots minus sulf... 135 3e-030
gb|DR120790.1|DR120790 RTMG1_32_B01.b1_A029 Roots minus mag... 135 3e-030
gb|DR159786.1|DR159786 RTFE1_1_C07.g1_A029 Roots minus iron... 135 3e-030
gb|DR385648.1|DR385648 RTHG1_10_A07.b1_A029 Roots plus adde... 135 3e-030
gb|DR385721.1|DR385721 RTHG1_10_A07.g1_A029 Roots plus adde... 135 3e-030
gb|DR385807.1|DR385807 RTHG1_11_B02.b1_A029 Roots plus adde... 135 3e-030
gb|BQ655628.1|BQ655628 NXRV097_A09_F NXRV (Nsf Xylem Root w... 133 1e-029
gb|CX645220.1|CX645220 COLD1_1_E08.b1_A029 Root cold Pinus ... 133 1e-029
gb|DN449800.1|DN449800 EST945599 Sequencing ESTs from loblo... 133 1e-029
gb|DN448564.1|DN448564 EST944363 Sequencing ESTs from loblo... 131 5e-029
gb|DR180335.1|DR180335 RTMNUT1_28_A09.b1_A029 Roots minus m... 131 5e-029
gb|DR180409.1|DR180409 RTMNUT1_28_A09.g1_A029 Roots minus m... 131 5e-029
gb|DT624307.1|DT624307 EST1158582 Sequencing ESTs from lobl... 131 5e-029
gb|BX678460.1|BX678460 BX678460 RS Pinus pinaster cDNA clon... 129 2e-028
gb|CO365320.1|CO365320 RTK1_25_A09.b1_A029 Roots minus pota... 129 2e-028
gb|CO367683.1|CO367683 RTK1_35_G11.g1_A029 Roots minus pota... 129 2e-028
gb|CV143784.1|CV143784 EST854993 Sequencing ESTs from loblo... 129 2e-028
gb|DR744065.1|DR744065 RTCU1_20_B04.b1_A029 Roots plus adde... 129 2e-028
gb|DR744146.1|DR744146 RTCU1_20_B04.g1_A029 Roots plus adde... 129 2e-028
gb|DT624712.1|DT624712 EST1159047 Sequencing ESTs from lobl... 129 2e-028
gb|AW869973.1|AW869973 NXNV_120_E10_F Nsf Xylem Normal wood... 127 8e-028
gb|BM492485.1|BM492485 NXRV_025_H12_F NXRV (Nsf Xylem Root ... 127 8e-028
gb|CO171130.1|CO171130 NDL1_19_H08.b1_A029 Needles control ... 127 8e-028
gb|CO171212.1|CO171212 NDL1_19_H08.g1_A029 Needles control ... 127 8e-028
gb|CO172890.1|CO172890 NDL1_32_C06.g1_A029 Needles control ... 127 8e-028
gb|CO174743.1|CO174743 NDL1_46_B05.b1_A029 Needles control ... 127 8e-028
gb|CO175048.1|CO175048 NDL1_48_B09.b1_A029 Needles control ... 127 8e-028
gb|CV137830.1|CV137830 EST849039 Sequencing ESTs from loblo... 127 8e-028
gb|CV146839.1|CV146839 EST858048 Sequencing ESTs from loblo... 127 8e-028
gb|DN611027.1|DN611027 EST964077 Subtracted pine embryo lib... 127 8e-028
gb|DN613336.1|DN613336 EST966386 Subtracted pine embryo lib... 127 8e-028
gb|DN615087.1|DN615087 EST968137 Subtracted pine embryo lib... 127 8e-028
gb|DR057665.1|DR057665 RTNIT1_7_D02.b1_A029 Roots minus nit... 127 8e-028
gb|DR165901.1|DR165901 RTPHOS1_8_C01.b1_A029 Roots minus ph... 127 8e-028
gb|DT628037.1|DT628037 EST1156786 Subtracted pine embryo li... 127 8e-028
gb|BF778859.1|BF778859 NXSI_089_C04_F NXSI (Nsf Xylem Side ... 125 3e-027
gb|BQ699592.1|BQ699592 NXRV124_C08_F NXRV (Nsf Xylem Root w... 125 3e-027
gb|CV138150.1|CV138150 EST849359 Sequencing ESTs from loblo... 123 1e-026
gb|CX650804.1|CX650804 COLD1_48_F03.b1_A029 Root cold Pinus... 123 1e-026
gb|DN448761.1|DN448761 EST944560 Sequencing ESTs from loblo... 123 1e-026
gb|DN464355.1|DN464355 EST960154 Sequencing ESTs from loblo... 123 1e-026
gb|DT626594.1|DT626594 EST1158518 Sequencing ESTs from lobl... 123 1e-026
gb|BM427816.1|BM427816 NXRV_003_F10_F NXRV (Nsf Xylem Root ... 121 5e-026
gb|CF393657.1|CF393657 RTDR3_15_G06.g1_A022 Loblolly pine r... 121 5e-026
gb|CF670600.1|CF670600 RTCNT1_51_G03.b1_A029 Root control P... 121 5e-026
gb|CO158439.1|CO158439 FLD1_6_H10.g1_A029 Root flooded Pinu... 121 5e-026
gb|CO160433.1|CO160433 FLD1_21_A05.b1_A029 Root flooded Pin... 121 5e-026
gb|CO169535.1|CO169535 NDL1_7_E07.g1_A029 Needles control P... 121 5e-026
gb|CV035452.1|CV035452 RTNACL1_16_E09.b1_A029 Roots plus ad... 121 5e-026
gb|CV035533.1|CV035533 RTNACL1_16_E09.g1_A029 Roots plus ad... 121 5e-026
gb|CV139008.1|CV139008 EST850217 Sequencing ESTs from loblo... 121 5e-026
gb|DR057791.1|DR057791 RTNIT1_7_G09.g1_A029 Roots minus nit... 121 5e-026
gb|DR692009.1|DR692009 EST1082096 Normalized pine embryo li... 121 5e-026
gb|DN452285.1|DN452285 EST948084 Sequencing ESTs from loblo... 119 2e-025
gb|BQ655609.1|BQ655609 NXRV096_G08_F NXRV (Nsf Xylem Root w... 117 8e-025
gb|BF517415.1|BF517415 NXSI_021_C04_F NXSI (Nsf Xylem Side ... 115 3e-024
gb|BF609139.1|BF609139 NXSI_040_G10_F NXSI (Nsf Xylem Side ... 115 3e-024
gb|BM133855.1|BM133855 NXLV_013_C03_F NXLV (Nsf Xylem Late ... 115 3e-024
gb|CF471877.1|CF471877 RTDS1_7_A04.b1_A015 Drought-stressed... 115 3e-024
gb|CF668618.1|CF668618 RTCNT1_37_D07.g1_A029 Root control P... 115 3e-024
gb|CV033463.1|CV033463 RTNACL1_34_E06.g1_A029 Roots plus ad... 115 3e-024
gb|CV034117.1|CV034117 RTNACL1_38_F10.g1_A029 Roots plus ad... 115 3e-024
gb|BX681265.1|BX681265 BX681265 RS Pinus pinaster cDNA clon... 113 1e-023
gb|CO175507.1|CO175507 NDL1_55_E09.b1_A029 Needles control ... 113 1e-023
gb|CV137322.1|CV137322 EST848531 Sequencing ESTs from loblo... 113 1e-023
gb|DN450740.1|DN450740 EST946539 Sequencing ESTs from loblo... 113 1e-023
gb|DN463023.1|DN463023 EST958822 Sequencing ESTs from loblo... 113 1e-023
gb|DN463997.1|DN463997 EST959796 Sequencing ESTs from loblo... 113 1e-023
gb|DR069600.1|DR069600 RTDK1_8_F03.b1_A029 Roots, dark Pinu... 113 1e-023
gb|DR110982.1|DR110982 RTS1_14_B03.g1_A029 Roots minus sulf... 113 1e-023
gb|DT627160.1|DT627160 EST1160236 Sequencing ESTs from lobl... 113 1e-023
gb|DR110915.1|DR110915 RTS1_14_B03.b1_A029 Roots minus sulf... 111 5e-023
gb|BX249821.1|BX249821 BX249821 Pinus pinaster differenciat... 109 2e-022
gb|BQ634891.1|BQ634891 NXRV074_D07_F NXRV (Nsf Xylem Root w... 109 2e-022
gb|CF402540.1|CF402540 RTWW1_21_B09.b1_A015 Well-watered lo... 109 2e-022
gb|CF663274.1|CF663274 RTCNT1_1_H01.g1_A029 Root control Pi... 109 2e-022
gb|CF665944.1|CF665944 RTCNT1_19_C10.g1_A029 Root control P... 109 2e-022
gb|CO414127.1|CO414127 EST844512 Sequencing ESTs from loblo... 107 7e-022
gb|DN456373.1|DN456373 EST952172 Sequencing ESTs from loblo... 107 7e-022
gb|DN457472.1|DN457472 EST953271 Sequencing ESTs from loblo... 107 7e-022
gb|DR053322.1|DR053322 RTCA1_10_H11.b1_A029 Roots minus cal... 107 7e-022
gb|DR053408.1|DR053408 RTCA1_10_H11.g1_A029 Roots minus cal... 107 7e-022
gb|DT626416.1|DT626416 EST1158340 Sequencing ESTs from lobl... 107 7e-022
gb|AA557052.1|AA557052 894 Loblolly pine N Pinus taeda cDNA... 105 3e-021
gb|AL750391.1|AL750391 AL750391 RN Pinus pinaster cDNA clon... 105 3e-021
gb|BX254930.1|BX254930 BX254930 Pinus pinaster differenciat... 105 3e-021
gb|BX682612.1|BX682612 BX682612 Pinus pinaster differenciat... 105 3e-021
emb|AJ306724.1|PPI306724 Pinus pinaster mRNA for putative h... 105 3e-021
gb|CF398884.1|CF398884 RTDS3_11_F10.b1_A022 Drought-stresse... 103 1e-020
gb|CN785975.1|CN785975 EST784666 Sequencing ESTs from loblo... 103 1e-020
gb|DN449450.1|DN449450 EST945249 Sequencing ESTs from loblo... 101 5e-020
gb|CX647286.1|CX647286 COLD1_15_B05.b1_A029 Root cold Pinus... 100 2e-019
gb|DN614270.1|DN614270 EST967320 Subtracted pine embryo lib... 100 2e-019
gb|DT629275.1|DT629275 EST1155845 Subtracted pine embryo li... 100 2e-019
gb|CO360916.1|CO360916 NDL2_1_A04.g1_A029 Needles control 2... 98 7e-019
gb|DR056542.1|DR056542 RTCA1_31_A10.b1_A029 Roots minus cal... 98 7e-019
gb|AW010925.1|AW010925 ST13C07 Pine TriplEx shoot tip libra... 96 3e-018
gb|BQ699631.1|BQ699631 NXRV124_G08_F NXRV (Nsf Xylem Root w... 96 3e-018
gb|CF401082.1|CF401082 RTWW1_10_E06.b1_A015 Well-watered lo... 96 3e-018
gb|CF478139.1|CF478139 RTWW3_19_D08.b1_A022 Well-watered lo... 96 3e-018
gb|DR051152.1|DR051152 RTBOR1_28_B08.b1_A029 Roots plus add... 94 1e-017
gb|AW311679.1|AW311679 NXNV055B06F Nsf Xylem Normal wood Ve... 92 4e-017
gb|CD027537.1|CD027537 NXNV055B06 Nsf Xylem Normal wood Ver... 92 4e-017
gb|AA556711.1|AA556711 566 Loblolly pine CA Pinus taeda cDN... 90 2e-016
gb|AW758902.1|AW758902 NXNV_094_C11_F Nsf Xylem Normal wood... 90 2e-016
gb|BE643870.1|BE643870 NXCI_048_C11_F NXCI (Nsf Xylem Compr... 90 2e-016
gb|CV031361.1|CV031361 RTNACL1_1_D03.b1_A029 Roots plus add... 90 2e-016
gb|DR069676.1|DR069676 RTDK1_8_F03.g1_A029 Roots, dark Pinu... 90 2e-016
gb|AW226374.1|AW226374 ST81F02 Pine TriplEx shoot tip libra... 88 7e-016
gb|AW985086.1|AW985086 NXNV_130_G02_F Nsf Xylem Normal wood... 88 7e-016
gb|BQ699704.1|BQ699704 NXRV125_G02_F NXRV (Nsf Xylem Root w... 88 7e-016
gb|BQ699835.1|BQ699835 NXRV122_C05_F NXRV (Nsf Xylem Root w... 88 7e-016
gb|CF390336.1|CF390336 RTDR2_18_E01.g1_A021 Loblolly pine r... 88 7e-016
gb|CF401399.1|CF401399 RTWW1_12_G07.b1_A015 Well-watered lo... 88 7e-016
gb|CF473892.1|CF473892 RTWW2_19_A07.g1_A021 Well-watered lo... 88 7e-016
gb|CO173097.1|CO173097 NDL1_34_B02.b1_A029 Needles control ... 88 7e-016
gb|DR051624.1|DR051624 RTBOR1_31_G03.b1_A029 Roots plus add... 88 7e-016
gb|DR051700.1|DR051700 RTBOR1_31_G03.g1_A029 Roots plus add... 88 7e-016
gb|DR053775.1|DR053775 RTCA1_13_F08.b1_A029 Roots minus cal... 88 7e-016
gb|DR053860.1|DR053860 RTCA1_13_F08.g1_A029 Roots minus cal... 88 7e-016
gb|DR055969.1|DR055969 RTCA1_27_E08.b1_A029 Roots minus cal... 88 7e-016
gb|DR056042.1|DR056042 RTCA1_27_E08.g1_A029 Roots minus cal... 88 7e-016
gb|DR166206.1|DR166206 RTPHOS1_10_F07.b2_A029 Roots minus p... 88 7e-016
gb|AW290495.1|AW290495 NXNV027F04F Nsf Xylem Normal wood Ve... 86 3e-015
gb|CD027154.1|CD027154 NXNV027F04 Nsf Xylem Normal wood Ver... 86 3e-015
gb|CF472833.1|CF472833 RTDS1_12_A12.b1_A015 Drought-stresse... 86 3e-015
gb|BE662545.1|BE662545 ST87/ST87F03 Pine TriplEx shoot tip ... 84 1e-014
gb|AL750922.1|AL750922 AL750922 RS Pinus pinaster cDNA clon... 84 1e-014
gb|BF777212.1|BF777212 NXSI_066_E08_F NXSI (Nsf Xylem Side ... 84 1e-014
gb|BX681603.1|BX681603 BX681603 RS Pinus pinaster cDNA clon... 84 1e-014
gb|DR387615.1|DR387615 RTHG1_23_B07.b1_A029 Roots plus adde... 84 1e-014
gb|BX251065.1|BX251065 BX251065 Pinus pinaster differenciat... 82 4e-014
gb|CF392477.1|CF392477 RTDR3_6_E10.b1_A022 Loblolly pine ro... 82 4e-014
gb|CF663191.1|CF663191 RTCNT1_1_H01.b1_A029 Root control Pi... 82 4e-014
gb|CF670676.1|CF670676 RTCNT1_51_G03.g1_A029 Root control P... 82 4e-014
gb|CO170340.1|CO170340 NDL1_13_A09.g1_A029 Needles control ... 82 4e-014
gb|CO175589.1|CO175589 NDL1_55_E09.g1_A029 Needles control ... 82 4e-014
gb|AW043241.1|AW043241 ST31A05 Pine TriplEx shoot tip libra... 80 2e-013
gb|AW056532.1|AW056532 ST51C08 Pine TriplEx shoot tip libra... 80 2e-013
gb|AW225905.1|AW225905 ST75B03 Pine TriplEx shoot tip libra... 80 2e-013
gb|AW755187.1|AW755187 PC12A09 Pine TriplEx pollen cone lib... 80 2e-013
gb|DN609590.1|DN609590 EST962640 Subtracted pine embryo lib... 80 2e-013
gb|BF610200.1|BF610200 NXSI_055_H06_F NXSI (Nsf Xylem Side ... 78 7e-013
gb|BF777371.1|BF777371 NXSI_068_G12_F NXSI (Nsf Xylem Side ... 78 7e-013
gb|CO165308.1|CO165308 FLD1_53_E09.g1_A029 Root flooded Pin... 78 7e-013
gb|CO173169.1|CO173169 NDL1_34_B02.g1_A029 Needles control ... 78 7e-013
gb|CV134168.1|CV134168 EST845377 Sequencing ESTs from loblo... 78 7e-013
gb|DN459794.1|DN459794 EST955593 Sequencing ESTs from loblo... 78 7e-013
gb|BQ699511.1|BQ699511 NXRV123_C05_F NXRV (Nsf Xylem Root w... 76 3e-012
gb|CO174818.1|CO174818 NDL1_46_B05.g1_A029 Needles control ... 76 3e-012
gb|BF518130.1|BF518130 NXSI_035_D04_F NXSI (Nsf Xylem Side ... 74 1e-011
gb|BF609399.1|BF609399 NXSI_045_H01_F NXSI (Nsf Xylem Side ... 74 1e-011
gb|BG318421.1|BG318421 NXPV_013_D12_F NXPV (Nsf Xylem Plani... 74 1e-011
gb|CO360838.1|CO360838 NDL2_1_A04.b1_A029 Needles control 2... 74 1e-011
gb|DN457498.1|DN457498 EST953297 Sequencing ESTs from loblo... 74 1e-011
gb|DR078694.1|DR078694 RTFEPL1_6_F10.b1_A029 Roots plus add... 74 1e-011
gb|DR163729.1|DR163729 RTFE1_44_C07.g1_A029 Roots minus iro... 74 1e-011
gb|DR384466.1|DR384466 RTHG1_2_A05.g1_A029 Roots plus added... 74 1e-011
gb|AW010329.1|AW010329 ST04G05 Pine TriplEx shoot tip libra... 72 4e-011
gb|BQ290854.1|BQ290854 NXRV050_E02_F NXRV (Nsf Xylem Root w... 72 4e-011
gb|BX677098.1|BX677098 BX677098 RN Pinus pinaster cDNA clon... 72 4e-011
gb|BX248896.1|BX248896 BX248896 Pinus pinaster differenciat... 70 2e-010
gb|BX253882.1|BX253882 BX253882 Pinus pinaster differenciat... 70 2e-010
gb|CF399037.1|CF399037 RTDS3_9_F10.b1_A022 Drought-stressed... 70 2e-010
gb|CF666953.1|CF666953 RTCNT1_27_F06.b1_A029 Root control P... 70 2e-010
gb|CF667031.1|CF667031 RTCNT1_27_F06.g1_A029 Root control P... 70 2e-010
gb|DN448266.1|DN448266 EST944065 Sequencing ESTs from loblo... 70 2e-010
gb|DR012745.1|DR012745 HEAT1_14_F05.g1_A029 Root at 37 C fo... 70 2e-010
gb|AW225891.1|AW225891 ST72H09 Pine TriplEx shoot tip libra... 68 6e-010
gb|AW587844.1|AW587844 ST67G01 Pine TriplEx shoot tip libra... 68 6e-010
gb|BX248981.1|BX248981 BX248981 Pinus pinaster differenciat... 68 6e-010
gb|CF398172.1|CF398172 RTDS3_21_D06.g1_A022 Drought-stresse... 66 2e-009
gb|CO414118.1|CO414118 EST844503 Sequencing ESTs from loblo... 66 2e-009
gb|DR092284.1|DR092284 RTAL1_28_D12.b1_A029 Roots plus adde... 66 2e-009
gb|BX251972.1|BX251972 BX251972 Pinus pinaster differenciat... 64 1e-008
gb|CF385427.1|CF385427 RTDR1_3_A06.g1_A015 Loblolly pine ro... 64 1e-008
gb|CF388222.1|CF388222 RTDR2_1_G03.g1_A021 Loblolly pine ro... 64 1e-008
>gb|CF389508.1|CF389508 RTDR2_8_H08.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_H08_A021 3', mRNA
sequence
Length = 738
Score = 196 bits (99), Expect = 1e-048
Identities = 258/311 (82%)
Strand = Plus / Plus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||| ||||| ||||| || |||||||| || ||||||||||| ||||| || |||
Sbjct: 279 gtaaactttgtaaccgcctttgtaccctcggaaacagcgtgcttggcaagctcccctgga 338
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| |||| | || | ||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 339 agagcgagcctaacagcagtctggatctcccgtgaggtaatggtcggcttcttgttgtag 398
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | ||||| | ||||||||||| || ||||| || |||||| ||||
Sbjct: 399 cgggcgagcttcgaagcctcacctgccagcttctcaaaaatgtcattaatgaagctgttc 458
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
|| || |||||||||| || |||||||| || || ||||||||||| || ||||||
Sbjct: 459 attatccccatggccttgctagaaataccaatatcaggatgcacctgcttcaggaccttg 518
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||||||||||||||| || || |||||||||||| ||||||||| || ||||||||
Sbjct: 519 aagatgtagatcttgtatgtttccacgctcttcttgtgcttcttcttgcctttcttctca 578
Query: 627 ccgccctcctt 637
||||| |||||
Sbjct: 579 ccgccttcctt 589
Score = 58.0 bits (29), Expect = 6e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| || ||||||||||||||||| |||||
Sbjct: 654 ggcttcttctccgctggtttcttctcggccttgggagccat 694
>gb|CO201907.1|CO201907 RTCNT2_8_H07.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_8_H07_A029 5', mRNA sequence
Length = 797
Score = 188 bits (95), Expect = 3e-046
Identities = 239/287 (83%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||| ||||| |||||||| |||||||| || ||||||||||| ||||| || |||
Sbjct: 403 gtaaactttgtaaccgccttggtaccctcggaaacagcgtgcttggcaagctcccctgga 344
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| |||| | || | ||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 343 agagcgagcctaacagcagtctggatctcccgtgaggtaatggtcggcttcttgttgtag 284
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| | ||||||||||| || ||||| || ||||| ||||
Sbjct: 283 cgggcgagcttcgaagcctcgccggccagcttctcaaaaatgtcattaatgaaactgttc 224
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
|| || |||||||||| || |||||||| || || ||||||||||| || ||||||
Sbjct: 223 attatccccatggccttgctagaaataccaatatcaggatgcacctgcttcaggaccttg 164
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttctt 613
||||||||||||||||| || || |||||||||||| |||||||||
Sbjct: 163 aagatgtagatcttgtatgtttccacgctcttcttgtgcttcttctt 117
>gb|CO167012.1|CO167012 FLD1_66_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_66_D11_A029 3', mRNA sequence
Length = 862
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 472 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 413
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 412 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 353
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 352 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 293
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 292 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 233
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 232 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 173
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 172 ccaccctcctt 162
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 100 ggcttcttctcagcgggtttcttctctgccttcggagccat 60
>gb|CO167079.1|CO167079 FLD1_66_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_66_D11_A029 5', mRNA sequence
Length = 862
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 499 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 440
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 439 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 380
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 379 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 320
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 319 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 260
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 259 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 200
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 199 ccaccctcctt 189
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 127 ggcttcttctcagcgggtttcttctctgccttcggagccat 87
>gb|CO176667.1|CO176667 NDL1_63_A10.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_63_A10_A029 5', mRNA sequence
Length = 828
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 478 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 419
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 418 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 359
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 358 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 299
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 298 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 239
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 238 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 179
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 178 ccaccctcctt 168
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 106 ggcttcttctcagcgggtttcttctctgccttcggagccat 66
>gb|DR013528.1|DR013528 HEAT1_19_H03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H03_A029 5', mRNA sequence
Length = 795
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 465 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 406
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 405 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 346
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 345 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 286
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 285 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 226
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 225 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 166
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 165 ccaccctcctt 155
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 93 ggcttcttctcagcgggtttcttctctgccttcggagccat 53
>gb|DR016955.1|DR016955 STRS1_13_E03.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_E03_A034 3', mRNA sequence
Length = 764
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 341 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 282
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 281 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 222
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 221 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 162
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 161 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 102
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 101 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 42
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 41 ccaccctcctt 31
>gb|DR017037.1|DR017037 STRS1_13_E03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_E03_A034 5', mRNA sequence
Length = 738
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 482 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 423
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 422 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 363
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 362 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 303
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 302 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 243
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 242 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 183
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 182 ccaccctcctt 172
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 110 ggcttcttctcagcgggtttcttctctgccttcggagccat 70
>gb|DR053982.1|DR053982 RTCA1_14_B10.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_14_B10_A029 5', mRNA sequence
Length = 684
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Plus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 158 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 217
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 218 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 277
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 278 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 337
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 338 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 397
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 398 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 457
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 458 ccaccctcctt 468
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 530 ggcttcttctcagcgggtttcttctctgccttcggagccat 570
>gb|DR092417.1|DR092417 STRR1_1_F09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F09_A033 3', mRNA sequence
Length = 752
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 505 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 446
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 445 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 386
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 385 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 326
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 325 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 266
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 265 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 206
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 205 ccaccctcctt 195
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 133 ggcttcttctcagcgggtttcttctctgccttcggagccat 93
>gb|DR092504.1|DR092504 STRR1_1_F09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_1_F09_A033 5', mRNA sequence
Length = 751
Score = 172 bits (87), Expect = 1e-041
Identities = 255/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 483 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 424
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 423 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 364
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 363 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 304
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 303 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 244
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 243 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 184
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 183 ccaccctcctt 173
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 111 ggcttcttctcagcgggtttcttctctgccttcggagccat 71
>gb|CV137672.1|CV137672 EST848881 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAS52 5' end, mRNA sequence
Length = 831
Score = 168 bits (85), Expect = 2e-040
Identities = 250/305 (81%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
|||||||| || || || ||||| || ||||||||||| ||||||||||| ||||| ||
Sbjct: 463 ttggtaacagctttcgtaccctccgacacggcgtgcttcgcgagctcgcctggaagagcg 404
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
|| | || | ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 403 agtcttacagcagtctggatctcccgggaggtgatggtcggcttcttgttgtagcgggcg 344
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|| || | | |||| | |||| ||||||||||||||| |||||||| |||||| ||
Sbjct: 343 agtttcgatgactcgccggccaacttctcgaagatgtcattgatgaaactgttcattatc 284
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
||| |||||| |||||||| || || || || |||||||| | |||||||| ||
Sbjct: 283 cccatagccttgctggagataccgatatcaggatgaacctgcttcaaaaccttgaaaata 224
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccgccc 632
||||||||||| || || |||||||||||| ||||||| | |||||||||||||||||
Sbjct: 223 tagatcttgtatgtttccacgctcttcttgtgcttcttccttcccttcttctcgccgcct 164
Query: 633 tcctt 637
|||||
Sbjct: 163 tcctt 159
>gb|CO199034.1|CO199034 GEO1_18_G06.b1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_18_G06_A029 3', mRNA sequence
Length = 589
Score = 167 bits (84), Expect = 9e-040
Identities = 252/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct: 419 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggcgagctcccctgga 360
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 359 agggcaagtcttacggcagtctgaatctcccgagaggtgatcgtgggcttcttattgtac 300
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| ||||| || ||||||||| ||||
Sbjct: 299 cgggcgagtttcgatgcctcgcttgccaatttctcaaagatatcattgatgaagctgttc 240
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| |||||||| || ||||||
Sbjct: 239 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttcagaaccttg 180
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 179 aagatatagatcttgtaggtctccacgctcttcttatgcttcttcttacccttcttctct 120
Query: 627 ccgccctc 634
||||||||
Sbjct: 119 ccgccctc 112
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| ||||| ||||||||
Sbjct: 44 ttcttctccgcgggtttcttctctgccttaggcgccat 7
>gb|CO199101.1|CO199101 GEO1_18_G06.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_18_G06_A029 5', mRNA sequence
Length = 649
Score = 167 bits (84), Expect = 9e-040
Identities = 252/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct: 463 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggcgagctcccctgga 404
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 403 agggcaagtcttacggcagtctgaatctcccgagaggtgatcgtgggcttcttattgtac 344
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| ||||| || ||||||||| ||||
Sbjct: 343 cgggcgagtttcgatgcctcgcttgccaatttctcaaagatatcattgatgaagctgttc 284
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| |||||||| || ||||||
Sbjct: 283 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttcagaaccttg 224
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 223 aagatatagatcttgtaggtctccacgctcttcttatgcttcttcttacccttcttctct 164
Query: 627 ccgccctc 634
||||||||
Sbjct: 163 ccgccctc 156
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| ||||| ||||||||
Sbjct: 88 ttcttctccgcgggtttcttctctgccttaggcgccat 51
>gb|CX647392.1|CX647392 COLD1_16_B07.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_16_B07_A029 3', mRNA sequence
Length = 726
Score = 167 bits (84), Expect = 9e-040
Identities = 252/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 406 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggctagctcccctgga 347
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 346 agggcaagtcttacagcagtctgaatctcccgagaggtgatcgtgggcttcttattgtag 287
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| || || || ||||||||| ||||
Sbjct: 286 cgggcgagtttcgatgcctcgcttgccaatttctcaaaaatatcattgatgaagctgttc 227
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| ||||||||||| ||||||
Sbjct: 226 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttgagaaccttg 167
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| |||||||| |||||||| ||||||||| |||||||||||
Sbjct: 166 aagatatagatcttgtaggtctcgacactcttcttatgcttcttcttacccttcttctct 107
Query: 627 ccgccctc 634
||||||||
Sbjct: 106 ccgccctc 99
>gb|DR177585.1|DR177585 RTMNUT1_6_E04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E04_A029 3', mRNA sequence
Length = 717
Score = 167 bits (84), Expect = 9e-040
Identities = 252/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct: 465 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggcgagctcccctgga 406
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 405 agggcaagtcttacggcagtctgaatctcccgagaggtgatcgtgggcttcttattgtac 346
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| ||||| || ||||||||| ||||
Sbjct: 345 cgggcgagtttcgatgcctcgcttgccaatttctcaaagatatcattgatgaagctgttc 286
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| |||||||| || ||||||
Sbjct: 285 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttcagaaccttg 226
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 225 aagatatagatcttgtaggtctccacgctcttcttatgcttcttcttacccttcttctct 166
Query: 627 ccgccctc 634
||||||||
Sbjct: 165 ccgccctc 158
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| ||||| ||||||||
Sbjct: 90 ttcttctccgcgggtttcttctctgccttaggcgccat 53
>gb|DR177666.1|DR177666 RTMNUT1_6_E04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E04_A029 5', mRNA sequence
Length = 676
Score = 167 bits (84), Expect = 9e-040
Identities = 252/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| || |||
Sbjct: 435 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggcgagctcccctgga 376
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 375 agggcaagtcttacggcagtctgaatctcccgagaggtgatcgtgggcttcttattgtac 316
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| ||||| || ||||||||| ||||
Sbjct: 315 cgggcgagtttcgatgcctcgcttgccaatttctcaaagatatcattgatgaagctgttc 256
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| |||||||| || ||||||
Sbjct: 255 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttcagaaccttg 196
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 195 aagatatagatcttgtaggtctccacgctcttcttatgcttcttcttacccttcttctct 136
Query: 627 ccgccctc 634
||||||||
Sbjct: 135 ccgccctc 128
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| ||||| ||||||||
Sbjct: 60 ttcttctccgcgggtttcttctctgccttaggcgccat 23
>gb|CF471563.1|CF471563 RTDS1_4_H08.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_4_H08_A015 3', mRNA sequence
Length = 670
Score = 165 bits (83), Expect = 4e-039
Identities = 254/311 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| |||||||| ||||||||||| || || |||
Sbjct: 403 gtaaacttggtaactgctttggttccctctgagacggcatgcttggcgagttcccctgga 344
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 343 agagcaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 284
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| ||| || ||||| |||||||||||||| |||
Sbjct: 283 cgagcgagtttcgatgcctcactagccaacttttcaaagatatcgttgatgaaggaattc 224
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 223 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 164
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| || |||||||||||||| |||||||||||| ||||||||| |||||||| ||
Sbjct: 163 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttcttgtct 104
Query: 627 ccgccctcctt 637
|| ||||||||
Sbjct: 103 ccaccctcctt 93
>gb|BQ699016.1|BQ699016 NXRV118_D05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV118_D05 5' similar to Arabidopsis thaliana
sequence At3g45980 histone H2B see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 542
Score = 159 bits (80), Expect = 2e-037
Identities = 251/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 464 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggctagctcccctgga 405
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 404 agggcaagtcttacagcagtctgaatctcccgagaggtgatcgtgggcttcttattgtag 345
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| || || || ||||||||| ||||
Sbjct: 344 cgggcgagtttcgatgcctcgcttgccaatttctcaaaaatatcattgatgaagctgttc 285
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| ||||||||||| ||||||
Sbjct: 284 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttgagaaccttg 225
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| || |||||||| ||||||||| |||||||||||
Sbjct: 224 aagatatagatcttgtaggtctccacactcttcttatgcttcttcttacccttcttctct 165
Query: 627 ccgccctc 634
||||||||
Sbjct: 164 ccgccctc 157
>gb|CO363452.1|CO363452 RTK1_9_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_9_G05_A029 5', mRNA sequence
Length = 761
Score = 159 bits (80), Expect = 2e-037
Identities = 251/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 437 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggctagctcccctgga 378
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 377 agggcaagtcttacagcagtctgaatctcccgagaggtgatcgtgggcttcttattgtag 318
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| || || || ||||||||| ||||
Sbjct: 317 cgggcgagtttcgatgcctcgcttgccaatttctcaaaaatatcattgatgaagctgttc 258
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| ||||||||||| ||||||
Sbjct: 257 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttgagaaccttg 198
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| || |||||||| ||||||||| |||||||||||
Sbjct: 197 aagatatagatcttgtaggtctccacactcttcttatgcttcttcttacccttcttctct 138
Query: 627 ccgccctc 634
||||||||
Sbjct: 137 ccgccctc 130
Score = 44.1 bits (22), Expect = 0.009
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| |||| ||||||||
Sbjct: 62 ttcttctccgcgggtttcttctctcccttcggcgccat 25
>gb|CO366760.1|CO366760 RTK1_29_H07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_29_H07_A029 5', mRNA sequence
Length = 736
Score = 159 bits (80), Expect = 2e-037
Identities = 251/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 411 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggctagctcccctgga 352
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 351 agggcaagtcttacagcagtctgaatctcccgagaggtgatcgtgggcttcttattgtag 292
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| || || || ||||||||| ||||
Sbjct: 291 cgggcgagtttcgatgcctcgcttgccaatttctcaaaaatatcattgatgaagctgttc 232
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| ||||||||||| ||||||
Sbjct: 231 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttgagaaccttg 172
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| || |||||||| ||||||||| |||||||||||
Sbjct: 171 aagatatagatcttgtaggtctccacactcttcttatgcttcttcttacccttcttctct 112
Query: 627 ccgccctc 634
||||||||
Sbjct: 111 ccgccctc 104
Score = 40.1 bits (20), Expect = 0.14
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgcc 728
|||||||||||||| |||||||| |||| ||||||
Sbjct: 36 ttcttctccgcgggtttcttctctcccttcggcgcc 1
>gb|DR013443.1|DR013443 HEAT1_19_H03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H03_A029 3', mRNA sequence
Length = 650
Score = 159 bits (80), Expect = 2e-037
Identities = 242/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
|||||||||||||| || ||||| ||||| || ||||| ||||||||||| || || |||
Sbjct: 305 gtaaacttggtaactgctttggttccctctgaaacggcatgcttggcgagttcccctgga 246
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
| || || | || | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 245 aaaacaagccttacagcggtctgaatctctcgggaggtaatggtgggcttcttgttgtac 186
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|| ||||| || | ||||| ||||| |||||| ||||| |||||||||||||| |||
Sbjct: 185 cgagcgagtttcgatgcctcactagccaacttctcaaagatatcgttgatgaaggaattc 126
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || ||||| || || || || ||||| ||||| ||||||
Sbjct: 125 atgattcccatggccttgctggaaataccgatatctggatgaacctgtttgagaaccttg 66
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| || |||||||||||||| |||||||||||| ||||||||| ||||||||
Sbjct: 65 aagatatatatcttgtacgtctcaacgctcttcttgtgcttcttcttgcccttctt 10
>gb|BG040104.1|BG040104 NXSI_106_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_106_D08 5' similar to Arabidopsis thaliana
sequence At3g45980 histone H2B see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 559
Score = 155 bits (78), Expect = 3e-036
Identities = 250/308 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct: 470 gtaaatttggtcacagccttggtgccctctgagacggcgtgtttggctagctcccctgga 411
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
||| | || | || | |||||| |||||||| ||||| | ||||||||||| ||||||
Sbjct: 410 agggcaagtcttacagcagtctgaatctcccgagaggtnntcgtgggcttcttattgtag 351
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
|||||||| || | |||||| |||| ||||| || || || ||||||||| ||||
Sbjct: 350 cgggcgagtttcgatgcctcgcttgccaatttctcaaaaatatcattgatgaagctgttc 291
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || ||||||| || ||||| ||||||||||| ||||||
Sbjct: 290 atgattcccatggccttactggaaataccaacatcagggtgaacctgcttgagaaccttg 231
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| || |||||||| ||||||||| |||||||||||
Sbjct: 230 aagatatagatcttgtaggtctccacactcttcttatgcttcttcttacccttcttctct 171
Query: 627 ccgccctc 634
||||||||
Sbjct: 170 ccgccctc 163
Score = 44.1 bits (22), Expect = 0.009
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| |||| ||||||||
Sbjct: 95 ttcttctccgcgggtttcttctctcccttcggcgccat 58
>gb|BQ654550.1|BQ654550 NXRV082_B07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV082_B07 5' similar to Arabidopsis thaliana
sequence At3g46030 histone H2B -like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 683
Score = 151 bits (76), Expect = 5e-035
Identities = 252/312 (80%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| |||||||| |||||||| ||||| || |||||||||||||| || |||
Sbjct: 461 gtaaacttggtgacggcctttgtgccctctgagacagcatgcttggcgagctcccctgga 402
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| |||| | | |||||||||||||||||||| || || ||||||||||| ||
Sbjct: 401 agagcgagccttannanngtctggatctcccgggaggtaatagttggcttcttgttatac 342
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| || || ||||| || |||||||| ||||
Sbjct: 341 cgggcgagctttgatgcctcgctcgccattttttcaaagatatcattgatgaaactgttc 282
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| |||||||||| || || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 281 atgatccccatggccttgctggaaatgccaatgtcagggtgaacctgtttgagaaccttg 222
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcg 626
||||| ||||||||||| ||||| || |||||||| | |||||||||||||||| ||
Sbjct: 221 aagatatagatcttgtaggtctcaacactcttcttatgcctcttcttccccttcttgtca 162
Query: 627 ccgccctccttg 638
|||| |||||||
Sbjct: 161 ccgctctccttg 150
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctc 715
||||||||||| ||||||||||||||
Sbjct: 89 ggcttcttctcagcgggcttcttctc 64
>gb|CX645287.1|CX645287 COLD1_1_E08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_1_E08_A029 5', mRNA sequence
Length = 659
Score = 151 bits (76), Expect = 5e-035
Identities = 241/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 426 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 367
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 366 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 307
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 306 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 247
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 246 atgattcccatggccttactggaaataccaatatccgggtgaacctgcttgagaacctta 187
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 186 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 131
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 54 ggctttttctccgcgggcttcttctctgctaccttgggcgccat 11
>gb|CX645872.1|CX645872 COLD1_5_F12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_5_F12_A029 5', mRNA sequence
Length = 655
Score = 151 bits (76), Expect = 5e-035
Identities = 241/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 462 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 403
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 402 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 343
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 342 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 283
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 282 atgattcccatggccttactggaaataccaatatccgggtgaacctgcttgagaacctta 223
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 222 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 167
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 90 ggctttttctccgcgggcttcttctctgctaccttgggcgccat 47
>gb|CX647350.1|CX647350 COLD1_15_B05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_15_B05_A029 5', mRNA sequence
Length = 634
Score = 151 bits (76), Expect = 5e-035
Identities = 241/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 445 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 386
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 385 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 326
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 325 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 266
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 265 atgattcccatggccttactggaaataccaatatccgggtgaacctgcttgagaacctta 206
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 205 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 150
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 73 ggctttttctccgcgggcttcttctctgctaccttgggcgccat 30
>gb|DR161066.1|DR161066 RTFE1_9_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_D10_A029 5', mRNA sequence
Length = 765
Score = 151 bits (76), Expect = 5e-035
Identities = 241/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 419 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 360
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 359 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 300
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 299 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 240
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 239 atgattcccatggccttactggaaataccaatatccgggtgaacctgcttgagaacctta 180
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 179 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 124
Score = 42.1 bits (21), Expect = 0.036
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttct 714
||||| |||||||||||||||||||
Sbjct: 47 ggctttttctccgcgggcttcttct 23
>gb|DR387694.1|DR387694 RTHG1_23_B07.g2_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_B07_A029 5', mRNA sequence
Length = 624
Score = 151 bits (76), Expect = 5e-035
Identities = 241/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 445 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 386
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 385 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 326
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 325 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 266
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||||||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 265 atgattcccatggccttactggaaataccaatatccgggtgaacctgcttgagaacctta 206
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 205 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 150
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 73 ggctttttctccgcgggcttcttctctgctaccttgggcgccat 30
>gb|CX651520.1|CX651520 COLD1_53_A06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_53_A06_A029 3', mRNA sequence
Length = 600
Score = 147 bits (74), Expect = 9e-034
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| || |||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 446 aacttggtcaccgccttggtaccctccgagacggcgtgcttggcgagctcccctggaagc 387
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 386 gccagccttacagcggtctgaatctcgcgagatgtaatggtgggcttcttgttgtagcgg 327
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| || || | | |||| || | |||||| ||||| |||||||||||| ||||||
Sbjct: 326 gcaagtttcgatgactcgctcgctaacttctcaaagatatcgttgatgaagctgttcatt 267
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||| |||||| || ||||| || || ||||| |||||||| | ||||| |||
Sbjct: 266 atccccatcgccttgctagaaataccgatatctgggtgaacctgcttcaaaaccttaaag 207
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 206 atatagatcttgtacgtctcgacgctcttcttgtgcttcttcttgcccttcttctctccg 147
Query: 630 cc 631
||
Sbjct: 146 cc 145
>gb|CX651588.1|CX651588 COLD1_53_A06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_53_A06_A029 5', mRNA sequence
Length = 627
Score = 147 bits (74), Expect = 9e-034
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| || |||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 448 aacttggtcaccgccttggtaccctccgagacggcgtgcttggcgagctcccctggaagc 389
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 388 gccagccttacagcggtctgaatctcgcgagatgtaatggtgggcttcttgttgtagcgg 329
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| || || | | |||| || | |||||| ||||| |||||||||||| ||||||
Sbjct: 328 gcaagtttcgatgactcgctcgctaacttctcaaagatatcgttgatgaagctgttcatt 269
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||| |||||| || ||||| || || ||||| |||||||| | ||||| |||
Sbjct: 268 atccccatcgccttgctagaaataccgatatctgggtgaacctgcttcaaaaccttaaag 209
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 208 atatagatcttgtacgtctcgacgctcttcttgtgcttcttcttgcccttcttctctccg 149
Query: 630 cc 631
||
Sbjct: 148 cc 147
>gb|DN462244.1|DN462244 EST958043 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIIK05 5' end, mRNA sequence
Length = 734
Score = 147 bits (74), Expect = 9e-034
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| || |||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 435 aacttggtcaccgccttggtaccctccgagacggcgtgcttggcgagctcccctggaagc 376
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 375 gccagccttacagcggtctgaatctcgcgagatgtaatggtgggcttcttgttgtagcgg 316
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| || || | | |||| || | |||||| ||||| |||||||||||| ||||||
Sbjct: 315 gcaagtttcgatgactcgctcgctaacttctcaaagatatcgttgatgaagctgttcatt 256
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||| |||||| || ||||| || || ||||| |||||||| | ||||| |||
Sbjct: 255 atccccatcgccttgctagaaataccgatatctgggtgaacctgcttcaaaaccttaaag 196
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 195 atatagatcttgtacgtctcgacgctcttcttgtgcttcttcttgcccttcttctctccg 136
Query: 630 cc 631
||
Sbjct: 135 cc 134
>gb|DT626962.1|DT626962 EST1160038 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAT30 5' end, mRNA sequence
Length = 792
Score = 147 bits (74), Expect = 9e-034
Identities = 245/302 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| || |||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct: 435 aacttggtcaccgccttggtaccctccgagacggcgtgcttggcgagctcccctggaagc 376
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| ||||| || || || ||||||||||||||||||||||||
Sbjct: 375 gccagccttacagcggtctgaatctcgcgagatgtaatggtgggcttcttgttgtagcgg 316
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| || || | | |||| || | |||||| ||||| |||||||||||| ||||||
Sbjct: 315 gcaagtttcgatgactcgctcgctaacttctcaaagatatcgttgatgaagctgttcatt 256
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||| |||||| || ||||| || || ||||| |||||||| | ||||| |||
Sbjct: 255 atccccatcgccttgctagaaataccgatatctgggtgaacctgcttcaaaaccttaaag 196
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 195 atatagatcttgtacgtctcgacgctcttcttgtgcttcttcttgcccttcttctctccg 136
Query: 630 cc 631
||
Sbjct: 135 cc 134
>emb|AJ297301.1|PPI297301 Pinus pinaster partial mRNA for histone H2B protein
Length = 374
Score = 147 bits (74), Expect = 9e-034
Identities = 227/278 (81%)
Strand = Plus / Minus
Query: 357 gagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccgaagtctggatctcc 416
||||||||||| ||||| ||||| || |||||| | || | || | |||||| ||||||
Sbjct: 335 gagacggcgtgtttggcaagctcccctggaagggcaagtcttacagcagtctgaatctcc 276
Query: 417 cgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcagccagc 476
|| ||||| || ||||||||||| |||||||||||||| || | |||||| |||||
Sbjct: 275 cgagaggtaatcgtgggcttcttattgtagcgggcgagtttcgatgcctcgcttgccagt 216
Query: 477 ttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatacca 536
||||| || || || ||||||||| ||||||||| ||||||||| || ||||||
Sbjct: 215 ttctcaaaaatatcattgatgaagctgttcatgattcccatggccttactggaaatacca 156
Query: 537 atgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctc 596
| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||| || |||
Sbjct: 155 acatccgggtgaacctgcttgagaaccttgaagatatagatcttgtaggtctccacactc 96
Query: 597 ttcttggccttcttcttccccttcttctcgccgccctc 634
||||| ||||||||| ||||||||||| ||||||||
Sbjct: 95 ttcttatgcttcttcttacccttcttctctccgccctc 58
>gb|BG039972.1|BG039972 NXSI_104_C03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_104_C03 5' similar to Arabidopsis thaliana
sequence At3g46030 histone H2B -like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 562
Score = 145 bits (73), Expect = 3e-033
Identities = 236/291 (81%)
Strand = Plus / Minus
Query: 344 cttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccga 403
|||||||||||| ||||||||||| ||||||||||| |||||| | || | || |
Sbjct: 448 cttggtgccctctgagacggcgtgtttggcgagctccnntggaagggcaagtcttacggc 389
Query: 404 agtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggc 463
|||||| |||||||| ||||| || ||||||||||| ||||| |||||||| || | ||
Sbjct: 388 agtctgaatctcccgagaggtgatcgtgggcttcttattgtaccgggcgagtttcgatgc 329
Query: 464 ctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcctt 523
|||| |||| ||||| ||||| || ||||||||| ||||||||| |||||||||
Sbjct: 328 ctcgcttgccaatttctcaaagatatcattgatgaagctgttcatgattcccatggcctt 269
Query: 524 ggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgta 583
|| ||||||| || ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 268 actggaaataccaacatcagggtgaacctgcttcagaaccttgaagatatagatcttgta 209
Query: 584 cgtctcgacgctcttcttggccttcttcttccccttcttctcgccgccctc 634
||||| ||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 208 ggtctccacgctcttcttatgcttcttcttacccttcttctctccgccctc 158
Score = 52.0 bits (26), Expect = 4e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 693 ttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||||| |||||||| ||||| ||||||||
Sbjct: 90 ttcttctccgcgggtttcttctctgccttaggcgccat 53
>gb|DR053904.1|DR053904 RTCA1_14_B10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_14_B10_A029 3', mRNA sequence
Length = 715
Score = 145 bits (73), Expect = 3e-033
Identities = 184/221 (83%)
Strand = Plus / Plus
Query: 417 cgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggcctcggcagccagc 476
|||||||| |||||||||||||||||||| || ||||| || | ||||| ||||| |
Sbjct: 2 cgggaggtaatggtgggcttcttgttgtaccgagcgagtttcgatgcctcactagccaac 61
Query: 477 ttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatacca 536
||||| ||||| |||||||||||||| |||||||| |||||||||| || |||||
Sbjct: 62 ttctcaaagatatcgttgatgaaggaattcatgattcccatggccttgctggaaataccg 121
Query: 537 atgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctc 596
|| || || || ||||| ||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 122 atatctggatgaacctgtttgagaaccttgaagatatatatcttgtacgtctcaacgctc 181
Query: 597 ttcttggccttcttcttccccttcttctcgccgccctcctt 637
|||||| ||||||||| |||||||| || || ||||||||
Sbjct: 182 ttcttgtgcttcttcttgcccttcttgtctccaccctcctt 222
Score = 42.1 bits (21), Expect = 0.036
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| ||||| |||||||| ||||| || |||||
Sbjct: 284 ggcttcttctcagcgggtttcttctctgccttcggagccat 324
>gb|DR165980.1|DR165980 RTPHOS1_8_C01.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_8_C01_A029 5', mRNA sequence
Length = 947
Score = 145 bits (73), Expect = 3e-033
Identities = 250/309 (80%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| || ||||||||||| ||||| || || |||||||| |||||||| || |||||
Sbjct: 461 aacttagtgacggccttggttccctctgatacagcgtgctttgcgagctcccctggaaga 402
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| ||||||||||| || |||||||||||||||||||| |||
Sbjct: 401 gcaagccttacagcggtctgaatctcccgggaagtgatggtgggcttcttgttgtaccgg 342
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| || || ||||| || ||||||||| |||||||
Sbjct: 341 gcgagctttgatgcctcgctcgccattttttcaaagatatcattgatgaagctgttcatg 282
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || || |||||||| ||||| ||||| ||||| |||||||||
Sbjct: 281 atccccatggccttgctggaaatgccaatgtcagggtgaacctgtttgagaaccttgaag 222
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| ||||||||||| ||||| || |||||||| | |||||||||||||||| || |||
Sbjct: 221 atatagatcttgtaggtctcaacactcttcttatgcctcttcttccccttcttgtctccg 162
Query: 630 ccctccttg 638
| |||||||
Sbjct: 161 ctctccttg 153
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 92 ggcttcttctcagcgggcttcttctctgctgccttgggcgccat 49
>gb|DR385392.1|DR385392 RTHG1_8_H08.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_H08_A029 3', mRNA sequence
Length = 653
Score = 145 bits (73), Expect = 3e-033
Identities = 238/293 (81%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||| || || || ||||| |||||||| || |||||
Sbjct: 216 aacttggtgacggccttggttccctctgatacagcatgcttcgcgagctcccctggaaga 275
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || || || | ||||| ||||||||||| || || || |||||||||||||| |||
Sbjct: 276 gcaagccgtacagcggtctgaatctcccgggaagtaattgttggcttcttgttgtaccgg 335
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| | |||| ||||||||||| |||||||||||| |||||||
Sbjct: 336 gcgagcttcgatgcctcgcctgccaatttctcgaagatatcgttgatgaagctgttcatg 395
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||| || || |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 396 attcccatggctttactggaaataccaatatcagggtgaacctgcttgagaaccttgaaa 455
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
| ||||||||||| ||||| |||||||||||| ||||||||| || |||||
Sbjct: 456 agatagatcttgtaggtctccacgctcttcttgtgcttcttctttcctttctt 508
>gb|DR385480.1|DR385480 RTHG1_8_H08.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_8_H08_A029 5', mRNA sequence
Length = 652
Score = 145 bits (73), Expect = 3e-033
Identities = 238/293 (81%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||| ||||| || || || ||||| |||||||| || |||||
Sbjct: 195 aacttggtgacggccttggttccctctgatacagcatgcttcgcgagctcccctggaaga 254
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|| || || || | ||||| ||||||||||| || || || |||||||||||||| |||
Sbjct: 255 acaagccgtacagcggtctgaatctcccgggaagtaattgttggcttcttgttgtaccgg 314
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | ||||| | |||| |||||||| || |||||||||||| |||||||
Sbjct: 315 gcgagcttcgatgcctcccctgccaatttctcgaaaatatcgttgatgaagctgttcatg 374
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||| || || |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 375 attcccatggctttactggaaataccaatatcagggtgaacctgcttgagaaccttgaaa 434
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
| ||||||||||| ||||| ||||||||||||| ||||||||| || |||||
Sbjct: 435 agatagatcttgtaggtctccacgctcttcttgggcttcttctttcctttctt 487
>gb|BX249979.1|BX249979 BX249979 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP031A03 similar to HISTONE H2B, mRNA
sequence
Length = 709
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 461 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaaga 402
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 401 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 342
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| ||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 341 gcaagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 282
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || |||||||| || || || ||||||||||| |||||||||
Sbjct: 281 attcccatggccttgctggaaataccaatatctggatgaacctgcttgagaaccttgaag 222
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 221 atatagatcttgtaggtctc 202
Score = 52.0 bits (26), Expect = 4e-005
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 90 cggcttcttctcggcgggcttcttctcacccttgggagccat 49
>gb|BX252133.1|BX252133 BX252133 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP060C07, mRNA sequence
Length = 717
Score = 143 bits (72), Expect = 1e-032
Identities = 249/308 (80%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||||||||| || || || ||||| |||||||| |||||||| ||||| |||||||||
Sbjct: 479 aacttggtaaccgcttttgtaccctcagagacggcatgcttggcaagctctccaggaagg 420
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||| | || | || || |||||||||||||| ||||| |||||||| ||||| |||
Sbjct: 419 gcgagccttacagcggtttgaatctcccgggaggtaatggtaggcttcttattgtatcgg 360
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|| || || | | |||| ||||||||||| || ||||| ||||| ||| ||||||
Sbjct: 359 gcaagtttcgatgactcgctggccagcttctcaaaaatgtcattgataaagctgttcatt 300
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| ||| ||||| || || || || |||||||| || |||||||||
Sbjct: 299 atccccatggccttgctcgaaataccgatatcgggatgaacctgcttcagaaccttgaag 240
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|| || |||||||| ||||| |||||||||||| ||||||||| |||||||||||| ||
Sbjct: 239 atataaatcttgtaggtctccacgctcttcttgtgcttcttctttcccttcttctcggcg 180
Query: 630 ccctcctt 637
|| |||||
Sbjct: 179 ccttcctt 172
Score = 50.1 bits (25), Expect = 1e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||||| || ||||||||||| |||||||| |||||
Sbjct: 107 ggcttcttctcagctggcttcttctctgccttgggagccat 67
>gb|CF399667.1|CF399667 RTDS3_25_C03.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_25_C03_A022 3', mRNA sequence
Length = 564
Score = 143 bits (72), Expect = 1e-032
Identities = 240/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 406 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 347
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 346 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 287
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 286 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 227
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||| ||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 226 atgattcccatcgccttactggaaataccaatatccgggtgaacctgcttgagaacctta 167
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 166 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 111
Score = 44.1 bits (22), Expect = 0.009
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctc 715
||||| ||||||||||||||||||||
Sbjct: 34 ggctttttctccgcgggcttcttctc 9
>gb|CF399704.1|CF399704 RTDS3_25_C03.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_25_C03_A022 5', mRNA sequence
Length = 631
Score = 143 bits (72), Expect = 1e-032
Identities = 240/296 (81%)
Strand = Plus / Minus
Query: 327 gtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccagga 386
||||||||||| ||||||||||| ||||| |||||||||||||| || ||||| || |||
Sbjct: 452 gtaaacttggtgacggccttggttccctccgagacggcgtgcttcgcaagctcccctgga 393
Query: 387 aggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtag 446
|| | || | || | ||| || ||||||||||| || || || |||||||||||||||
Sbjct: 392 agagcaagccttacagcagtttgaatctcccgggaagtaattgtcggcttcttgttgtag 333
Query: 447 cgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttc 506
||||||||||| | |||||| |||| |||||||| || || || |||||| ||||
Sbjct: 332 cgggcgagcttcgatgcctcgctcgccaatttctcgaatatatcattaatgaagctgttc 273
Query: 507 atgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttg 566
||||| ||| ||||| || |||||||| |||||||| ||||||||||| |||||
Sbjct: 272 atgattcccatcgccttactggaaataccaatatccgggtgaacctgcttgagaacctta 213
Query: 567 aagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttctt 622
||||| |||||||| || ||||| ||||||||||| ||||||||| ||||||||
Sbjct: 212 aagatatagatcttataggtctccacgctcttcttatgcttcttctttcccttctt 157
Score = 44.1 bits (22), Expect = 0.009
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggc---cttgggcgccat 730
||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 80 ggctttttctccgcgggcttcttctctgctaccttgggcgccat 37
>gb|CF400555.1|CF400555 RTWW1_6_D06.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_6_D06_A015 3', mRNA sequence
Length = 667
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 203 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 262
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 263 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 322
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 323 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 382
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 383 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 442
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 443 atatagatcttgtaggtctc 462
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 574 cggcttcttctcggcgggcttcttctcacccttggg 609
>gb|CF401140.1|CF401140 RTWW1_10_E06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_10_E06_A015 5', mRNA sequence
Length = 745
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 453 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 394
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 393 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 334
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 333 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 274
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 273 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 214
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 213 atatagatcttgtaggtctc 194
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 82 cggcttcttctcggcgggcttcttctcacccttggg 47
>gb|CF401415.1|CF401415 RTWW1_12_G07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_12_G07_A015 5', mRNA sequence
Length = 824
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 459 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 400
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 399 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 340
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 339 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 280
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 279 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 220
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 219 atatagatcttgtaggtctc 200
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 88 cggcttcttctcggcgggcttcttctcacccttggg 53
>gb|CF401878.1|CF401878 RTWW1_15_A12.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_15_A12_A015 5', mRNA sequence
Length = 824
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 446 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 387
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 386 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 327
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 326 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 267
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 266 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 207
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 206 atatagatcttgtaggtctc 187
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 75 cggcttcttctcggcgggcttcttctcacccttggg 40
>gb|CF402610.1|CF402610 RTWW1_21_B09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_21_B09_A015 5', mRNA sequence
Length = 764
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 451 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 392
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 391 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 332
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 331 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 272
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 271 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 212
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 211 atatagatcttgtaggtctc 192
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 80 cggcttcttctcggcgggcttcttctcacccttggg 45
>gb|CF402871.1|CF402871 RTWW1_23_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_23_A01_A015 5', mRNA sequence
Length = 667
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 448 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 389
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 388 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 329
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 328 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 269
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 268 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 209
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 208 atatagatcttgtaggtctc 189
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 77 cggcttcttctcggcgggcttcttctcacccttggg 42
>gb|CF471021.1|CF471021 RTDS1_16_F12.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_F12_A015 3', mRNA sequence
Length = 679
Score = 143 bits (72), Expect = 1e-032
Identities = 213/260 (81%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
||||| ||||||||||| |||||||| |||||||| |||||||||||||| || |||||
Sbjct: 201 aacttcgtaacggcctttgtgccctctgagacggcatgcttggcgagctcccctggaagc 260
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
| || | || | ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 261 gcaagccttacggcggtctgaatctcccgggaggtaatggtcggcttcttgttgtagcga 320
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
|||||||| | |||||| |||| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 321 gcgagctttgacgcctcgctcgccaatttctcaaagatatcattgataaaggaattcatg 380
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||| || ||||| || || || || ||||||||||| |||||||||
Sbjct: 381 attcccatggccttgctggaaataccgatatctggatgaacctgcttgagaaccttgaag 440
Query: 570 atgtagatcttgtacgtctc 589
|| ||||||||||| |||||
Sbjct: 441 atatagatcttgtaggtctc 460
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 689 cggcttcttctccgcgggcttcttctcggccttggg 724
|||||||||||| |||||||||||||| |||||||
Sbjct: 572 cggcttcttctcggcgggcttcttctcacccttggg 607
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 113,111
Number of Sequences: 355925
Number of extensions: 113111
Number of successful extensions: 38562
Number of sequences better than 0.5: 575
Number of HSP's better than 0.5 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34585
Number of HSP's gapped (non-prelim): 3305
length of query: 842
length of database: 217,277,237
effective HSP length: 19
effective length of query: 823
effective length of database: 210,514,662
effective search space: 173253566826
effective search space used: 173253566826
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)