BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.006B01F020311.3.1
(609 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (j... 216 1e-053
gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (j... 216 1e-053
gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (j... 216 1e-053
gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressi... 216 1e-053
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 216 1e-053
gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (j... 208 3e-051
gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (j... 198 2e-048
gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (j... 186 9e-045
gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (j... 186 9e-045
gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (j... 186 9e-045
gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (j... 186 9e-045
gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (j... 186 9e-045
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 186 9e-045
gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (j... 178 2e-042
gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (j... 178 2e-042
gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (j... 163 1e-037
gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (j... 145 3e-032
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 145 3e-032
gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (j... 137 8e-030
gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (j... 127 7e-027
gb|CB641392.1|CB641392 OSJNEb01A03.f OSJNEb Oryza sativa (j... 125 3e-026
gb|CG408882.1|CG408882 Ds576 Ds insertion lines Oryza sativ... 123 1e-025
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 117 7e-024
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 117 7e-024
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 117 7e-024
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 117 7e-024
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 117 7e-024
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 117 7e-024
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 117 7e-024
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 115 3e-023
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 115 3e-023
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 115 3e-023
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 115 3e-023
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 115 3e-023
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 115 3e-023
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 109 2e-021
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 109 2e-021
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 109 2e-021
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-021
dbj|AG214514.1| Oryza sativa (japonica cultivar-group) DNA,... 107 7e-021
gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (j... 105 3e-020
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 103 1e-019
gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressi... 100 2e-018
gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (j... 96 3e-017
gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (j... 96 3e-017
gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (j... 90 2e-015
gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (j... 88 6e-015
gb|CB678077.1|CB678077 OSJNEe15K07.f OSJNEe Oryza sativa (j... 82 4e-013
gb|CB639189.1|CB639189 OSJNEa08L04.f OSJNEa Oryza sativa (j... 80 2e-012
gb|CB637776.1|CB637776 OSJNEa04P09.f OSJNEa Oryza sativa (j... 78 6e-012
gb|AACV01023904.1| Oryza sativa (japonica cultivar-group) c... 76 2e-011
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|CB637692.1|CB637692 OSJNEa04L18.f OSJNEa Oryza sativa (j... 64 9e-008
gb|CB637913.1|CB637913 OSJNEa05G23.f OSJNEa Oryza sativa (j... 60 1e-006
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
gb|CF303549.1|CF303549 ABF1--02-J07.g1 ABF3-overexpressing ... 56 2e-005
dbj|AG023178.1| Oryza sativa (japonica cultivar-group) DNA,... 52 4e-004
gb|CB676812.1|CB676812 OSJNEe13E16.f OSJNEe Oryza sativa (j... 48 0.006
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK062739.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.022
dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.087
ref|XM_479599.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.087
>gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 5', mRNA sequence
Length = 736
Score = 216 bits (109), Expect = 1e-053
Identities = 289/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 194 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 253
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 254 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 313
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 314 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 373
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 374 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 433
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 434 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 493
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 494 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 542
>gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 5', mRNA sequence
Length = 832
Score = 216 bits (109), Expect = 1e-053
Identities = 289/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 323 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 382
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 383 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 442
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 443 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 502
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 503 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 562
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 563 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 622
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 623 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 671
>gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 5', mRNA sequence
Length = 752
Score = 216 bits (109), Expect = 1e-053
Identities = 289/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 319 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 378
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 379 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 438
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 439 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 498
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 499 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 558
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 559 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 618
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 619 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 667
>gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-P15, mRNA sequence
Length = 669
Score = 216 bits (109), Expect = 1e-053
Identities = 289/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 286 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 345
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 346 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 405
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 406 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 465
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 466 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 525
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 526 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 585
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 586 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 634
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 216 bits (109), Expect = 1e-053
Identities = 289/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 343 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 402
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 403 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 462
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 463 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 522
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 523 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 582
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 583 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 642
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 643 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 691
>gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 5', mRNA sequence
Length = 871
Score = 208 bits (105), Expect = 3e-051
Identities = 288/349 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || | ||||||||||| ||||| ||||||||
Sbjct: 323 aggagctggtggaatatgggctgaacttgttactaacagaggttttgaagctggaggccc 382
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 383 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 442
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 443 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 502
Query: 408 ctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaa 467
||| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 503 ctgtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaa 562
Query: 468 catagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatg 527
|||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 563 catagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgga 622
Query: 528 cttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 623 gttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 671
>gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 5', mRNA sequence
Length = 577
Score = 198 bits (100), Expect = 2e-048
Identities = 235/280 (83%)
Strand = Plus / Plus
Query: 230 gagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggcccca 289
|||||||||| |||||||| ||| |||| || ||||||||||| ||||| ||||||||
Sbjct: 224 gagctggtggaatatgggctgaagtggttagtaacagaggttttgaagctggaggccctc 283
Query: 290 atactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtgg 349
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||||
Sbjct: 284 ataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgtgg 343
Query: 350 agactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctct 409
||||||||| |||||||||||||||| || | |||||||||||||||||||| ||||
Sbjct: 344 cgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttctct 403
Query: 410 gcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaaca 469
| | | ||||| ||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 404 gtgacaattgcccagctggtggtgttggcatttataacccaggattctggggcatgaaca 463
Query: 470 tagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||| || || |||| |||||||||||
Sbjct: 464 tagaagatggaaagacctactatttagtgatgtatgttaa 503
>gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 5', mRNA sequence
Length = 592
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 222 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 281
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 282 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 341
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 342 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 401
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 402 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 461
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 462 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 521
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 522 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 581
Query: 504 tgttaa 509
||||||
Sbjct: 582 tgttaa 587
>gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13K04 5', mRNA sequence
Length = 616
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 222 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 281
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 282 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 341
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 342 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 401
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 402 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 461
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 462 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 521
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 522 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 581
Query: 504 tgttaa 509
||||||
Sbjct: 582 tgttaa 587
>gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 5', mRNA sequence
Length = 839
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 212 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 271
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 272 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 331
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 332 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 391
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 392 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 451
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 452 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 511
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 512 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 571
Query: 504 tgttaa 509
||||||
Sbjct: 572 tgttaa 577
>gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04J07 5', mRNA sequence
Length = 814
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 175 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 234
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 235 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 294
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 295 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 354
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 355 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 414
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 415 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 474
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 475 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 534
Query: 504 tgttaa 509
||||||
Sbjct: 535 tgttaa 540
>gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12M09 5', mRNA sequence
Length = 851
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 220 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 279
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 280 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 339
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 340 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 399
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 400 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 459
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 460 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 519
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 520 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 579
Query: 504 tgttaa 509
||||||
Sbjct: 580 tgttaa 585
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 186 bits (94), Expect = 9e-045
Identities = 298/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 264 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 323
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 324 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 383
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 384 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 443
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 444 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 503
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 504 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcattta 563
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 564 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 623
Query: 504 tgttaa 509
||||||
Sbjct: 624 tgttaa 629
>gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 5', mRNA sequence
Length = 843
Score = 178 bits (90), Expect = 2e-042
Identities = 231/278 (83%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
|||||||| |||||||| ||||| || || ||||||||||| ||||| |||||||| ||
Sbjct: 27 gctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccctcat 86
Query: 292 actccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtggag 351
|| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | ||||| |
Sbjct: 87 accccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcg 146
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| |||||||||| ||||| || | |||||||||||||||||||| |||||
Sbjct: 147 actgatcgaacgtcatgttttagtcggaatactgttgctctaaggatggaggttctctgt 206
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacata 471
|| | ||||| ||||| |||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 207 gataattgcccagctggtggtgttggcatttataacccagggttctggggcatgaacata 266
Query: 472 gaagatggaaagacatatcatctagttatgtatgttaa 509
||||||||||||| || || |||| |||||||||||
Sbjct: 267 gaagatggaaagatctacaatttagtgatgtatgttaa 304
>gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02F24 5', mRNA sequence
Length = 837
Score = 178 bits (90), Expect = 2e-042
Identities = 297/366 (81%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 259 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 318
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || || ||
Sbjct: 319 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 378
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
||||||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 379 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 438
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 439 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 498
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||| ||||||||| ||||| || | ||||| ||||| ||||||||||||||
Sbjct: 499 tgttgctctaaagatggaggttctctgtgataattgcccagctggtggtgttggcattta 558
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 559 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 618
Query: 504 tgttaa 509
||||||
Sbjct: 619 tgttaa 624
>gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 5', mRNA sequence
Length = 699
Score = 163 bits (82), Expect = 1e-037
Identities = 295/366 (80%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || | ||||||||| ||||||| || ||| | |||| |
Sbjct: 154 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 213
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| |||||||| || ||| | ||| |||||||| |||||||| ||||| || | ||
Sbjct: 214 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttaataa 273
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgt 323
|| |||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| |
Sbjct: 274 cataggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 333
Query: 324 tggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacat 383
||| || ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || |
Sbjct: 334 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatac 393
Query: 384 cgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||||| ||||| || | ||||| |||| ||||||||||||||
Sbjct: 394 tgttgctctaaggatggaggttctctgtgataattgcccaactggaggtgttggcattta 453
Query: 444 caaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgta 503
||||| || ||||||||||||||||||||||||||||||| || || |||| |||||
Sbjct: 454 taacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgta 513
Query: 504 tgttaa 509
||||||
Sbjct: 514 tgttaa 519
>gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 5', mRNA sequence
Length = 683
Score = 145 bits (73), Expect = 3e-032
Identities = 208/253 (82%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
|||||||| |||||||| ||||| || || |||||||| || ||||| |||||||| ||
Sbjct: 388 gctggtggaatatgggctgaacttgttagtaacagaggctttgaagctggaggccctcat 447
Query: 292 actccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtggag 351
|| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | ||||| |
Sbjct: 448 accccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcg 507
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| |||||||||| || || || | |||||||||||||||||||| |||||
Sbjct: 508 actgatcgaacgtcatgttttagacggaatactgttgctctaaggatggaggttctctgt 567
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacata 471
|| | ||||| ||||| || ||||||||||| ||||| || ||||||||||||||||||
Sbjct: 568 gataattgcccagctggtggagttggcatttataacccagggttctggggcatgaacata 627
Query: 472 gaagatggaaaga 484
||| |||||||||
Sbjct: 628 gaacatggaaaga 640
>ref|XM_471515.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1965
Score = 145 bits (73), Expect = 3e-032
Identities = 118/133 (88%)
Strand = Plus / Plus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 316 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 375
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacata 471
|||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 376 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatgaacata 435
Query: 472 gaagatggaaaga 484
|| ||||||||||
Sbjct: 436 gaggatggaaaga 448
Score = 135 bits (68), Expect = 3e-029
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggggt 203
|||||||||||||||||| || ||| ||||||||||||||| || ||| || ||||| |
Sbjct: 108 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccctgagacactctttgggat 167
Query: 204 gttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaa 263
|| || |||||||| ||| | ||||| ||||| ||||||||||| || ||||||||
Sbjct: 168 atttttcgaggagatcaaccatgctggagcaggtggaatatgggcagagcttgtcagcaa 227
Query: 264 cagaggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 228 cagaggtttcgaagctggaggccctaatactccatcgagcattgaccc 275
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 496 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 539
>gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 5', mRNA sequence
Length = 848
Score = 137 bits (69), Expect = 8e-030
Identities = 141/165 (85%)
Strand = Plus / Plus
Query: 345 tgtggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggt 404
||||| ||||||||| |||||||||| ||||| || | ||||||||||||||||||||
Sbjct: 27 tgtggcgactgatcgaacgtcatgttttagtcggaatactgttgctctaaggatggaggt 86
Query: 405 cctctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcat 464
||||| || | ||||| ||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 87 tctctgtgataattgcccagctggtggtgttggcatttataacccagggttctggggcat 146
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 147 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 191
>gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13C06 5', mRNA sequence
Length = 601
Score = 127 bits (64), Expect = 7e-027
Identities = 178/216 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 382 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 441
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 442 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 501
Query: 348 ggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcct 407
|| ||||||||| |||||||||||||||| || | |||||||||||||||||||| ||
Sbjct: 502 ggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttct 561
Query: 408 ctgcaatgactgcccggctggcggtgttggcattta 443
||| | | ||||| ||||| ||||||||||||||
Sbjct: 562 ctgtgacaattgcccagctggtggtgttggcattta 597
>gb|CB641392.1|CB641392 OSJNEb01A03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01A03 5', mRNA sequence
Length = 864
Score = 125 bits (63), Expect = 3e-026
Identities = 135/159 (84%)
Strand = Plus / Plus
Query: 418 tgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacatagaagat 477
||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 5 tgcccagctggtggtgttggcatttataacccaggattctggggcatgaacatagaagat 64
Query: 478 ggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccacatgcttgacagtt 537
|||||||| || || |||| ||||||||||| || ||| |||| |||||||||
Sbjct: 65 ggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtt 124
Query: 538 tcgctgacaagctctgatgggttgcagaatctggcttca 576
|| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 125 tccttgacaagttctgatgggtcgcaaaatctggcttca 163
>gb|CG408882.1|CG408882 Ds576 Ds insertion lines Oryza sativa (japonica cultivar-group)
genomic, DNA sequence
Length = 442
Score = 123 bits (62), Expect = 1e-025
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 258 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 199
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
||||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 198 ggtgactgcccagctggtggtgttggcatttacaatccaggattctggggcatg 145
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 343 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 299
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 68619 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 68560
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 68559 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 68500
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 68499 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 68440
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 68439 cccaggattctggggcatg 68421
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 30700 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 30641
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 30640 ccaggattctggggcatg 30623
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 68172 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 68113
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 68112 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 68061
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 30239 gaacatagaagaaggaaagacctataatctagtcatgtat 30200
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 69435 aggagctggtggaatatgggctgaacttgttagtaacagaggt 69393
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 31441 ggagctggtgggatatgggcggagcttgtcagtaacaga 31403
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1360551 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360610
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 1360611 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360670
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 1360671 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360730
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 1360731 cccaggattctggggcatg 1360749
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 1398470 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398529
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 1398530 ccaggattctggggcatg 1398547
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 1360998 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361057
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 1361058 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361109
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 1398931 gaacatagaagaaggaaagacctataatctagtcatgtat 1398970
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 1397729 ggagctggtgggatatgggcggagcttgtcagtaacaga 1397767
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 1359735 aggagctggtggaatatgggctgaacttgttagtaacagaggt 1359777
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 19659 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 19600
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 19599 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 19540
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 19539 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 19480
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 19479 cccaggattctggggcatg 19461
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 19212 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 19153
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 19152 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 19101
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 20475 aggagctggtggaatatgggctgaacttgttagtaacagaggt 20433
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1285668 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1285727
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 1285728 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1285787
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 1285788 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1285847
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 1285848 cccaggattctggggcatg 1285866
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 1326626 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1326685
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 1326686 ccaggattctggggcatg 1326703
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 1286115 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1286174
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 1286175 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1286226
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 1327085 gaacatagaagaaggaaagacctataatctagtcatgtat 1327124
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 1325885 ggagctggtgggatatgggcggagcttgtcagtaacaga 1325923
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 1284852 aggagctggtggaatatgggctgaacttgttagtaacagaggt 1284894
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1285668 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1285727
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 1285728 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1285787
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 1285788 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1285847
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 1285848 cccaggattctggggcatg 1285866
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 1326626 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1326685
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 1326686 ccaggattctggggcatg 1326703
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 1286115 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1286174
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 1286175 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1286226
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 1327085 gaacatagaagaaggaaagacctataatctagtcatgtat 1327124
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 1325885 ggagctggtgggatatgggcggagcttgtcagtaacaga 1325923
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 1284852 aggagctggtggaatatgggctgaacttgttagtaacagaggt 1284894
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1360550 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360609
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 1360610 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360669
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 1360670 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360729
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 1360730 cccaggattctggggcatg 1360748
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 1398469 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398528
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 1398529 ccaggattctggggcatg 1398546
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 1360997 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361056
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 1361057 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361108
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 1398930 gaacatagaagaaggaaagacctataatctagtcatgtat 1398969
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 1397728 ggagctggtgggatatgggcggagcttgtcagtaacaga 1397766
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 1359734 aggagctggtggaatatgggctgaacttgttagtaacagaggt 1359776
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 117 bits (59), Expect = 7e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1360550 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360609
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||||||| || | ||
Sbjct: 1360610 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360669
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| | | ||||| ||||| |||||||||||||| ||
Sbjct: 1360670 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360729
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 1360730 cccaggattctggggcatg 1360748
Score = 75.8 bits (38), Expect = 2e-011
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||||||||||||| | ||||| | | || || ||||||||||||||||||||||||
Sbjct: 1398469 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398528
Query: 448 cctggattctggggcatg 465
|| |||||||||||||||
Sbjct: 1398529 ccaggattctggggcatg 1398546
Score = 63.9 bits (32), Expect = 9e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 1360997 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361056
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 1361057 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361108
Score = 48.1 bits (24), Expect = 0.006
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtat 504
|||||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 1398930 gaacatagaagaaggaaagacctataatctagtcatgtat 1398969
Score = 46.1 bits (23), Expect = 0.022
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacaga 267
|||||||||||||||||||| || || ||||| ||||||
Sbjct: 1397728 ggagctggtgggatatgggcggagcttgtcagtaacaga 1397766
Score = 46.1 bits (23), Expect = 0.022
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 1359734 aggagctggtggaatatgggctgaacttgttagtaacagaggt 1359776
>gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009093, whole
genome shotgun sequence
Length = 33275
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 12661 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 12602
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 12601 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 12548
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 12746 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 12702
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 12265 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 12222
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 13437 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 13396
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 13235 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 13194
>ref|NT_079855.2| Oryza sativa (japonica cultivar-group)
Length = 2354488
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 2232349 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 2232290
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 2232289 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 2232236
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 2232434 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 2232390
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 2231953 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 2231910
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 2233124 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 2233083
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 2232922 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 2232881
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 1888847 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 1888788
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 1888787 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 1888734
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 1888932 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 1888888
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 1888451 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 1888408
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 1889623 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 1889582
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 1889421 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 1889380
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 9236209 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 9236150
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 9236149 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 9236096
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 9236294 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 9236250
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 9235813 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 9235770
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 9236985 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 9236944
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 9236783 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 9236742
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09,
complete sequence
Length = 164911
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 42772 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 42713
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 42712 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 42659
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 42857 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 42813
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 42376 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 42333
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 43547 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 43506
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 43345 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 43304
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 115 bits (58), Expect = 3e-023
Identities = 100/114 (87%)
Strand = Plus / Minus
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| || ||||||||||||||||| ||| ||||||| ||||||||||| |||||
Sbjct: 11559762 actgatcgatcatcatgtttcagtcgaaatatcattgctctgaggatggaggttctctgt 11559703
Query: 412 aatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatg 465
|||||||| ||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 11559702 ggtgactgccaagctggtggtgttggcatttacaatccaggattctggggcatg 11559649
Score = 65.9 bits (33), Expect = 2e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgaccc 311
|||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 11559847 aggtttcgaagctggaggccctaatactccatcgagcattgaccc 11559803
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 532 acagtttcgctgacaagctctgatgggttgcagaatctggcttc 575
|||||||| || |||||||||||||||||||| |||||| ||||
Sbjct: 11559366 acagtttcactaacaagctctgatgggttgcaaaatctgtcttc 11559323
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || ||| |||||||||||||||
Sbjct: 11560537 cctcaaggttgatgcctcaccgcagcatgctcgaaagatccc 11560496
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
||||| ||||| ||||||||||| || |||||||||||||||
Sbjct: 11560335 ggagcaggtggaatatgggcagagcttgtcagcaacagaggt 11560294
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 75208 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 75267
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 75268 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 75327
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 75328 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 75387
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 75388 cccagggttctggggcatg 75406
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttac 444
|||||||||||||||||| | ||||| || | || || || |||||||| |||||||||
Sbjct: 106248 gttgctctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttac 106307
Query: 445 aaccctggattctggggcatg 465
||||| |||||||||||||||
Sbjct: 106308 aacccaggattctggggcatg 106328
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 105442 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 105483
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 82981 gctggtggtgttggaatatacaatccaggattctggggcatg 83022
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 74543 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 74584
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 75644 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 75688
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 454695 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 454754
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 454755 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 454814
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 454815 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 454874
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 454875 cccagggttctggggcatg 454893
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttac 444
|||||||||||||||||| | ||||| || | || || || |||||||| |||||||||
Sbjct: 485735 gttgctctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttac 485794
Query: 445 aaccctggattctggggcatg 465
||||| |||||||||||||||
Sbjct: 485795 aacccaggattctggggcatg 485815
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 484929 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 484970
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 462468 gctggtggtgttggaatatacaatccaggattctggggcatg 462509
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 454030 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 454071
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 455131 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 455175
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Minus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 26071 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 26012
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 26011 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 25952
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 25951 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 25892
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 25891 cccagggttctggggcatg 25873
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 26736 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 26695
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 18297 gctggtggtgttggaatatacaatccaggattctggggcatg 18256
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 25634 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 25590
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1149559 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1149618
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 1149619 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1149678
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 1149679 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1149738
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 1149739 cccagggttctggggcatg 1149757
Score = 67.9 bits (34), Expect = 6e-009
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgc-aatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||| | ||||| ||| | || || || |||||||| ||||||||
Sbjct: 1181528 gttgctctaaggatggagattctctgtgaataattgtccagccggcggtgtcggcattta 1181587
Query: 444 caaccctggattctggggcatg 465
|||||| |||||||||||||||
Sbjct: 1181588 caacccaggattctggggcatg 1181609
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 1180722 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 1180763
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 1157333 gctggtggtgttggaatatacaatccaggattctggggcatg 1157374
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 1148894 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 1148935
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 1149996 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 1150040
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1451851 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1451910
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 1451911 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1451970
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 1451971 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1452030
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 1452031 cccagggttctggggcatg 1452049
Score = 67.9 bits (34), Expect = 6e-009
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgc-aatgactgcccggctggcggtgttggcattta 443
|||||||||||||||||| | ||||| ||| | || || || |||||||| ||||||||
Sbjct: 1483820 gttgctctaaggatggagattctctgtgaataattgtccagccggcggtgtcggcattta 1483879
Query: 444 caaccctggattctggggcatg 465
|||||| |||||||||||||||
Sbjct: 1483880 caacccaggattctggggcatg 1483901
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 1483014 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 1483055
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 1459625 gctggtggtgttggaatatacaatccaggattctggggcatg 1459666
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 1451186 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 1451227
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 1452288 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 1452332
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1456413 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1456472
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 1456473 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1456532
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 1456533 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1456592
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 1456593 cccagggttctggggcatg 1456611
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttac 444
|||||||||||||||||| | ||||| || | || || || |||||||| |||||||||
Sbjct: 1487453 gttgctctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttac 1487512
Query: 445 aaccctggattctggggcatg 465
||||| |||||||||||||||
Sbjct: 1487513 aacccaggattctggggcatg 1487533
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 1486647 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 1486688
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 1464186 gctggtggtgttggaatatacaatccaggattctggggcatg 1464227
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 1455748 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 1455789
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 1456849 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 1456893
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 109 bits (55), Expect = 2e-021
Identities = 163/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 1454134 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1454193
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||| ||||| || | ||
Sbjct: 1454194 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1454253
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| ||||| || | ||||| ||||| |||||||||||||| ||
Sbjct: 1454254 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1454313
Query: 447 ccctggattctggggcatg 465
||| || ||||||||||||
Sbjct: 1454314 cccagggttctggggcatg 1454332
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 385 gttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttac 444
|||||||||||||||||| | ||||| || | || || || |||||||| |||||||||
Sbjct: 1485174 gttgctctaaggatggagattctctgtgataattgtccagccggcggtgtcggcatttac 1485233
Query: 445 aaccctggattctggggcatg 465
||||| |||||||||||||||
Sbjct: 1485234 aacccaggattctggggcatg 1485254
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggt 270
|||||||||||||||||||| || || ||||| |||||||||
Sbjct: 1484368 ggagctggtgggatatgggcggagcttgtcagtaacagaggt 1484409
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatg 465
||||| |||||||| || ||||| || |||||||||||||||
Sbjct: 1461907 gctggtggtgttggaatatacaatccaggattctggggcatg 1461948
Score = 44.1 bits (22), Expect = 0.087
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 144 cctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
|||||||||||||||||| || | ||||||||| |||||||
Sbjct: 1453469 cctcaaggttgatgcctcaccgcaacttgctcgacagatccc 1453510
Score = 42.1 bits (21), Expect = 0.34
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||||||||||||| || || |||| |||||||||||
Sbjct: 1454570 gaacatagaagatggaaagatctacaatttagtgatgtatgttaa 1454614
>dbj|AG214514.1| Oryza sativa (japonica cultivar-group) DNA, clone:T14887T, 3'
flanking sequence of Tos17 insertion in rice strain
NC2786, genomic survey sequence
Length = 664
Score = 107 bits (54), Expect = 7e-021
Identities = 162/199 (81%)
Strand = Plus / Plus
Query: 267 aggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttgg 326
|||||| ||||| |||||||| |||| ||||| |||||||| || ||| ||| ||||
Sbjct: 420 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 479
Query: 327 ggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgt 386
|| ||||| ||| | | ||||| ||||||||| |||||||||||| ||| || | ||
Sbjct: 480 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcantcggaatactgt 539
Query: 387 tgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaa 446
|||||||||||||||||| || || | | ||||| ||||| |||||||||||||| ||
Sbjct: 540 tgctctaaggatggaggttctntgtgacaattgcccagctggnggtgttggcatttataa 599
Query: 447 ccctggattctggggcatg 465
||| |||||||||||||||
Sbjct: 600 cccaggattctggggcatg 618
>gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa05A13 5', mRNA sequence
Length = 574
Score = 105 bits (53), Expect = 3e-020
Identities = 137/165 (83%)
Strand = Plus / Plus
Query: 345 tgtggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggt 404
||||| ||||||||| |||||||||| |||| || | |||||||||| |||||||||
Sbjct: 43 tgtggcgactgatcgaacgtcatgttttagtctgaatactgttgctctaacgatggaggt 102
Query: 405 cctctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcat 464
||||| || | ||||| ||||| |||||||||||||| ||||| | |||||||||||
Sbjct: 103 tctctgtgataattgcccagctggtggtgttggcatttataacccatggttctggggcat 162
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaa 509
|||||||||| ||||||||| || || |||| |||||||||||
Sbjct: 163 gaacatagaacatggaaagatctacaatttagtgatgtatgttaa 207
>dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096C04, full
insert sequence
Length = 2409
Score = 103 bits (52), Expect = 1e-019
Identities = 220/276 (79%)
Strand = Plus / Plus
Query: 229 ggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggcccc 288
|||||||||||||||||||| || || ||||| |||||||| || ||||| ||||| |||
Sbjct: 405 ggagctggtgggatatgggcggagcttgtcagtaacagagggtttgaagctggagggccc 464
Query: 289 aatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtg 348
| || || || || |||||||| ||| ||| |||| || || ||||| | || ||
Sbjct: 465 cacaccccttcaaatattgacccatggtctatcattggagatgaatcctctatatacgtc 524
Query: 349 gagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctc 408
||||||| | || || |||||| | | ||| || |||||||||||||||||| | |||
Sbjct: 525 acgactgattgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctc 584
Query: 409 tgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaac 468
|| || | || || || |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 585 tgtgataattgtccagccggcggtgtcggcatttacaacccaggattctggggcatgaat 644
Query: 469 atagaagatggaaagacatatcatctagttatgtat 504
|||||||| ||||| | ||| ||||||| ||||||
Sbjct: 645 atagaagaaggaaaagcctataatctagtcatgtat 680
>gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-B11, mRNA sequence
Length = 680
Score = 99.6 bits (50), Expect = 2e-018
Identities = 186/232 (80%)
Strand = Plus / Plus
Query: 345 tgtggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggt 404
||||| ||||||||| |||||||||||||||| || | ||||||||||||||||||||
Sbjct: 67 tgtggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggt 126
Query: 405 cctctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcat 464
||||| | | || |||| |||||||||||||| ||||| ||||||||| |
Sbjct: 127 tctctgtgacatnngtccatctggtggtgttggcatttataacccaggattctggttttt 186
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
|||||||||||||||||||| || || |||| ||||||||||| || ||| ||||
Sbjct: 187 taacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 246
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttca 576
||||||||||| ||||||| |||||||||| ||| ||||||||||||
Sbjct: 247 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 298
>gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04G24 5', mRNA sequence
Length = 395
Score = 95.6 bits (48), Expect = 3e-017
Identities = 168/208 (80%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
|||||||| |||||||| ||||| || || ||||||||||| ||||| ||| |||| ||
Sbjct: 188 gctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggacgccctcat 247
Query: 292 actccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtggag 351
|| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | ||||| |
Sbjct: 248 accccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcg 307
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| |||||||||| | ||| || | |||||||||||||||||||| |||||
Sbjct: 308 actgatcgaacgtcatgttttaatcggaatactgttgctctaaggatggaggttctctgt 367
Query: 412 aatgactgcccggctggcggtgttggca 439
|| | ||||| ||||| ||||||||||
Sbjct: 368 gataattgcccagctggtggtgttggca 395
>gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E11 5', mRNA sequence
Length = 799
Score = 95.6 bits (48), Expect = 3e-017
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 418 tgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacatagaagat 477
||||| ||||| |||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 30 tgcccagctggtggtgttggcatttataacccagggttctggggcatgaacatagaagat 89
Query: 478 ggaaagacatatcatctagttatgtatgttaa 509
||||||| || || |||| |||||||||||
Sbjct: 90 ggaaagatctacaatttagtgatgtatgttaa 121
>gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03A01 5', mRNA sequence
Length = 530
Score = 89.7 bits (45), Expect = 2e-015
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 228 aggagctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccc 287
|||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 382 aggagctggtggaatatgggctgaacttgttagtaacagaggttttgaagctggaggccc 441
Query: 288 caatactccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgt 347
|||| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | |||
Sbjct: 442 tcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttgt 501
Query: 348 ggagactgatcgttcgtcatgtttcagtc 376
|| ||||||||| |||||||||||||||
Sbjct: 502 ggcgactgatcgaacgtcatgtttcagtc 530
>gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08G24 5', mRNA sequence
Length = 500
Score = 87.7 bits (44), Expect = 6e-015
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
|||||||| |||||||| ||||| || | ||||||||||| ||||| |||||||| ||
Sbjct: 310 gctggtggaatatgggctgaacttgttactaacagaggttttgaagctggaggccctcat 369
Query: 292 actccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtggag 351
|| ||||| |||||||| || ||| ||| |||| || ||||| ||| | | ||||| |
Sbjct: 370 accccatcaaacattgatccatggtccataattggtgatgactcttccatatttgtggcg 429
Query: 352 actgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgc 411
|||||||| |||||||||| | ||| || | |||||||||||||||||||| ||||||
Sbjct: 430 actgatcgaacgtcatgttttaatcggaatactgttgctctaaggatggaggttctctgc 489
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 649,456
Number of Sequences: 438736
Number of extensions: 649456
Number of successful extensions: 10567
Number of sequences better than 0.5: 67
Number of HSP's better than 0.5 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10037
Number of HSP's gapped (non-prelim): 484
length of query: 609
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 588
effective length of database: 2,791,206,460
effective search space: 1641229398480
effective search space used: 1641229398480
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)