BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL6b07.xg.2.1
(644 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB674003.1|CB674003 OSJNEe08N08.r OSJNEe Oryza sativa (j... 228 3e-057
dbj|AK065470.1| Oryza sativa (japonica cultivar-group) cDNA... 228 3e-057
dbj|AP003250.3| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
gb|AACV01000148.1| Oryza sativa (japonica cultivar-group) c... 228 3e-057
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
ref|XM_462740.1| Oryza sativa (japonica cultivar-group), p... 228 3e-057
ref|XM_550053.1| Oryza sativa (japonica cultivar-group), mRNA 228 3e-057
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 228 3e-057
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 228 3e-057
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 228 3e-057
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
gb|CF304164.1|CF304164 ABF1--04-D22.g1 ABF3-overexpressing ... 206 1e-050
emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromoso... 204 4e-050
gb|AACV01008434.1| Oryza sativa (japonica cultivar-group) c... 204 4e-050
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 204 4e-050
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 204 4e-050
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 204 4e-050
emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromoso... 204 4e-050
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 204 4e-050
dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA... 194 4e-047
gb|AACV01000149.1| Oryza sativa (japonica cultivar-group) c... 194 4e-047
ref|XM_462744.1| Oryza sativa (japonica cultivar-group), p... 194 4e-047
ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA 194 4e-047
gb|AU030772.1|AU030772 AU030772 Rice cDNA from immature lea... 129 2e-027
gb|CB670206.1|CB670206 OSJNEe03C20.r OSJNEe Oryza sativa (j... 127 8e-027
ref|XM_475858.1| Oryza sativa (japonica cultivar-group), p... 127 8e-027
dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA... 96 3e-017
dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA... 96 3e-017
dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA... 96 3e-017
ref|NM_192128.1| Oryza sativa (japonica cultivar-group), p... 96 3e-017
gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 ... 90 2e-015
ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA 90 2e-015
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 90 2e-015
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 90 2e-015
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|AQ161274.1|AQ161274 nbxb0006L07f CUGI Rice BAC Library O... 82 4e-013
dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA... 82 4e-013
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 82 4e-013
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
gb|AACV01013012.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
gb|AACV01014884.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
dbj|AP000399.1| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA 82 4e-013
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 82 4e-013
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
dbj|AK101690.1| Oryza sativa (japonica cultivar-group) cDNA... 80 2e-012
gb|AC107226.2| Oryza sativa (japonica cultivar-group) chrom... 80 2e-012
gb|AACV01006133.1| Oryza sativa (japonica cultivar-group) c... 80 2e-012
ref|NM_187607.1| Oryza sativa (japonica cultivar-group), p... 80 2e-012
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 80 2e-012
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 80 2e-012
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 80 2e-012
gb|CZ557374.1|CZ557374 M0034218 AS_TRIM_TDNA_B1 Oryza sativ... 78 7e-012
dbj|AK072425.1| Oryza sativa (japonica cultivar-group) cDNA... 78 7e-012
dbj|AK099661.1| Oryza sativa (japonica cultivar-group) cDNA... 78 7e-012
dbj|AK121185.1| Oryza sativa (japonica cultivar-group) cDNA... 78 7e-012
emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC O... 78 7e-012
emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC O... 78 7e-012
gb|AC135925.2| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 78 7e-012
gb|AACV01012667.1| Oryza sativa (japonica cultivar-group) c... 78 7e-012
gb|AACV01025444.1| Oryza sativa (japonica cultivar-group) c... 78 7e-012
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 78 7e-012
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 78 7e-012
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 78 7e-012
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 78 7e-012
gb|AACV01008110.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|CB651993.1|CB651993 OSJNEc01E22.r OSJNEc Oryza sativa (j... 72 4e-010
gb|CB656581.1|CB656581 OSJNEc11B17.r OSJNEc Oryza sativa (j... 72 4e-010
gb|CB670790.1|CB670790 OSJNEe04A22.r OSJNEe Oryza sativa (j... 72 4e-010
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 72 4e-010
dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA... 72 4e-010
gb|AC137547.2| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
gb|AACV01002138.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 72 4e-010
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 72 4e-010
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 72 4e-010
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
dbj|AP003450.3| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
dbj|AK101874.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
gb|AY224423.1| Oryza sativa (japonica cultivar-group) isola... 68 6e-009
dbj|AK106421.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
dbj|AK111267.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromoso... 68 6e-009
dbj|AP004839.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AP004868.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AP003818.2| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|AACV01005029.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01009831.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01009832.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01022660.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
ref|XM_467048.1| Oryza sativa (japonica cultivar-group), mRNA 68 6e-009
ref|XM_472608.1| Oryza sativa (japonica cultivar-group), p... 68 6e-009
ref|XM_479597.1| Oryza sativa (japonica cultivar-group), mRNA 68 6e-009
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 68 6e-009
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 68 6e-009
gb|CH401260.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|AZ126148.1|AZ126148 OSJNBb0075K04f CUGI Rice BAC Library... 66 3e-008
gb|CB670222.1|CB670222 OSJNEe03D04.r OSJNEe Oryza sativa (j... 66 3e-008
gb|AC090974.1|AC090974 Oryza sativa (japonica cultivar-grou... 66 3e-008
dbj|AP003405.1| Oryza sativa (japonica cultivar-group) chro... 66 3e-008
dbj|AK066000.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 66 3e-008
emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC O... 66 3e-008
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 66 3e-008
gb|AC109595.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01002803.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01012211.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01024276.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01025609.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|XM_463531.1| Oryza sativa (japonica cultivar-group), p... 66 3e-008
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 66 3e-008
dbj|AP003561.2| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC O... 64 1e-007
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 64 1e-007
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|AACV01014891.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01022658.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01025291.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
dbj|AP003621.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AC136971.3| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|AZ045838.1|AZ045838 nbeb0087F23f CUGI Rice BAC Library (... 62 4e-007
gb|CB655442.1|CB655442 OSJNEc08O04.r OSJNEc Oryza sativa (j... 62 4e-007
gb|CV728405.1|CV728405 COLD--01-E02.b1 Cold treated rice le... 62 4e-007
dbj|AK066397.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F2... 62 4e-007
emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OS... 62 4e-007
dbj|AP005516.5| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
ref|NT_107107.1| Oryza sativa chromosome 3, . BAC OSJNBa002... 62 4e-007
gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 ... 62 4e-007
gb|AACV01005116.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01007448.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01007452.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01010208.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01015493.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01015494.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
gb|AACV01021937.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
ref|NM_186680.1| Oryza sativa (japonica cultivar-group), mRNA 62 4e-007
ref|NM_197350.1| Oryza sativa (japonica cultivar-group) put... 62 4e-007
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 62 4e-007
ref|XM_473357.1| Oryza sativa (japonica cultivar-group), p... 62 4e-007
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 62 4e-007
dbj|AP005055.2| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
dbj|AP004858.3| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 62 4e-007
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromoso... 62 4e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
emb|AL607095.1|OSJN01003 Oryza sativa (japonica cultivar-gr... 60 2e-006
dbj|AK066883.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AK068992.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AK070254.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AP004010.2| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
dbj|AP004862.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AACV01002580.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01013394.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NM_191096.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
ref|XM_476608.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 60 2e-006
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|C22548.1|C22548 C22548 Rice panicle at ripening stage Or... 58 6e-006
gb|C22549.1|C22549 C22549 Rice panicle at ripening stage Or... 58 6e-006
gb|AU056526.1|AU056526 AU056526 Oryza sativa mature leaf Ni... 58 6e-006
gb|AU070792.1|AU070792 AU070792 Rice cDNA from young root O... 58 6e-006
gb|CB668413.1|CB668413 OSJNEd16E03.r OSJNEd Oryza sativa (j... 58 6e-006
emb|AL607100.1|OSJN01008 Oryza sativa (japonica cultivar-gr... 58 6e-006
dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chro... 58 6e-006
dbj|AP004088.1| Oryza sativa (japonica cultivar-group) chro... 58 6e-006
dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chro... 58 6e-006
dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
dbj|AP003962.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP004397.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP005198.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 58 6e-006
dbj|AP005412.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP005457.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|AACV01003369.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01014841.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01016778.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01018319.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01018777.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01020258.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
ref|XM_483121.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 58 6e-006
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 58 6e-006
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 58 6e-006
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|C74881.1|C74881 C74881 Rice cDNA from immature leaf incl... 56 2e-005
gb|CB665618.1|CB665618 OSJNEd12C08.r OSJNEd Oryza sativa (j... 56 2e-005
gb|CB668018.1|CB668018 OSJNEd15K10.r OSJNEd Oryza sativa (j... 56 2e-005
gb|CB668062.1|CB668062 OSJNEd15L11.r OSJNEd Oryza sativa (j... 56 2e-005
gb|CB669771.1|CB669771 OSJNEe02I03.r OSJNEe Oryza sativa (j... 56 2e-005
gb|CF303843.1|CF303843 ABF1--03-F22.g1 ABF3-overexpressing ... 56 2e-005
gb|CF304334.1|CF304334 ABF1--04-L03.g1 ABF3-overexpressing ... 56 2e-005
gb|AU057426.2|AU057426 AU057426 Oryza sativa mature leaf Ni... 56 2e-005
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 56 2e-005
gb|AY224427.1| Oryza sativa (japonica cultivar-group) isola... 56 2e-005
dbj|AK066081.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK066529.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK071963.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK121286.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
gb|AC099732.2| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbar... 56 2e-005
gb|AACV01000262.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01006149.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01006694.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01010605.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01018313.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
ref|XM_462812.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_470602.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_474167.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_474168.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_482068.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|XM_550272.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
dbj|AP003282.2| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromoso... 56 2e-005
emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromoso... 56 2e-005
gb|AU082462.1|AU082462 AU082462 Rice callus Oryza sativa (j... 54 1e-004
dbj|AP004796.1| Oryza sativa (japonica cultivar-group) chro... 54 1e-004
dbj|AK108437.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-004
dbj|AK109607.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-004
dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-004
dbj|AP004584.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
dbj|AP003609.2| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
dbj|AP003539.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
dbj|AP004991.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AACV01013237.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01014572.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01017114.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA 54 1e-004
ref|NM_188024.1| Oryza sativa (japonica cultivar-group), Oz... 54 1e-004
dbj|AP000969.1| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AQ574767.1|AQ574767 nbxb0086E23f CUGI Rice BAC Library O... 52 4e-004
gb|AZ046436.1|AZ046436 nbeb0088L24r CUGI Rice BAC Library (... 52 4e-004
gb|AU071036.1|AU071036 AU071036 Rice cDNA from young root O... 52 4e-004
gb|CB644108.1|CB644108 OSJNEb05C18.r OSJNEb Oryza sativa (j... 52 4e-004
gb|CB647821.1|CB647821 OSJNEb10O20.r OSJNEb Oryza sativa (j... 52 4e-004
gb|CB647854.1|CB647854 OSJNEb10P13.r OSJNEb Oryza sativa (j... 52 4e-004
gb|CB657858.1|CB657858 OSJNEc13H23.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB657935.1|CB657935 OSJNEc13J23.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB659292.1|CB659292 OSJNEc16C07.f OSJNEc Oryza sativa (j... 52 4e-004
gb|CB659293.1|CB659293 OSJNEc16C07.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB659328.1|CB659328 OSJNEc16D07.f OSJNEc Oryza sativa (j... 52 4e-004
gb|CB659329.1|CB659329 OSJNEc16D07.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB659700.1|CB659700 OSJNEc16O11.r OSJNEc Oryza sativa (j... 52 4e-004
gb|CB670134.1|CB670134 OSJNEe03B05.r OSJNEe Oryza sativa (j... 52 4e-004
dbj|AK062501.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK101039.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK105683.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK110462.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK119823.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK120882.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06... 52 4e-004
gb|AC125472.2| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AC108500.3| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AP003770.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AACV01005519.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01005981.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01012356.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01012445.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01014438.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01014842.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01021752.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
ref|NM_196934.1| Oryza sativa (japonica cultivar-group) put... 52 4e-004
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 52 4e-004
ref|XM_470532.1| Oryza sativa (japonica cultivar-group), p... 52 4e-004
ref|XM_475450.1| Oryza sativa (japonica cultivar-group), p... 52 4e-004
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 52 4e-004
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 52 4e-004
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 52 4e-004
dbj|AP004140.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|CZ557857.1|CZ557857 M0036359 AS_TRIM_TDNA_B1 Oryza sativ... 50 0.001
gb|C99533.1|C99533 C99533 Rice panicle (longer than 10cm) O... 50 0.001
dbj|AK101712.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK102100.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK102667.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK107147.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK109928.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK110011.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AP004158.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC O... 50 0.001
emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC O... 50 0.001
gb|AC129227.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|AC123524.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP000366.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AC129226.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP004082.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005290.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 50 0.001
gb|AACV01000481.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01003541.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01010347.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01017855.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01022625.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01023743.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01025485.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01025487.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|XM_463879.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_464445.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_468561.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_473601.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_481215.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NM_188528.1| Oryza sativa (japonica cultivar-group), Oz... 50 0.001
dbj|AP004121.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP001800.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP002835.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromoso... 50 0.001
gb|CB636408.1|CB636408 OSJNEa01O03.f OSJNEa Oryza sativa (j... 48 0.006
gb|CB647139.1|CB647139 OSJNEb09P01.r OSJNEb Oryza sativa (j... 48 0.006
gb|CB654413.1|CB654413 OSJNEc06N04.f OSJNEc Oryza sativa (j... 48 0.006
gb|CB654414.1|CB654414 OSJNEc06N04.r OSJNEc Oryza sativa (j... 48 0.006
gb|CB655494.1|CB655494 OSJNEc08P18.f OSJNEc Oryza sativa (j... 48 0.006
gb|CB661965.1|CB661965 OSJNEd05I05.r OSJNEd Oryza sativa (j... 48 0.006
gb|CB662172.1|CB662172 OSJNEd05P02.r OSJNEd Oryza sativa (j... 48 0.006
gb|CB668515.1|CB668515 OSJNEd16G12.r OSJNEd Oryza sativa (j... 48 0.006
gb|CB668618.1|CB668618 OSJNEd16J01.r OSJNEd Oryza sativa (j... 48 0.006
gb|CB677447.1|CB677447 OSJNEe14G09.r OSJNEe Oryza sativa (j... 48 0.006
gb|CB677739.1|CB677739 OSJNEe15A20.f OSJNEe Oryza sativa (j... 48 0.006
gb|CV724173.1|CV724173 root--06-B13.g1 Rice root lambda pha... 48 0.006
gb|CV724230.1|CV724230 root--06-E13.g1 Rice root lambda pha... 48 0.006
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 48 0.006
dbj|AP003964.1| Oryza sativa (japonica cultivar-group) chro... 48 0.006
gb|AC135159.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
dbj|AP003829.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AK068774.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK069546.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK121676.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 48 0.006
emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC O... 48 0.006
gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 gen... 48 0.006
dbj|AP003864.4| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003956.5| Oryza sativa (japonica cultivar-group) geno... 48 0.006
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 48 0.006
ref|NT_107138.1| Oryza sativa (japonica cultivar-group) 48 0.006
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 48 0.006
dbj|AP003224.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003614.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003769.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AACV01002451.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01003122.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01008640.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01016278.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01018500.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01023423.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01024191.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01024192.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
ref|NM_187346.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
ref|NM_189481.1| Oryza sativa (japonica cultivar-group), p... 48 0.006
ref|XM_463461.1| Oryza sativa (japonica cultivar-group), p... 48 0.006
ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 48 0.006
dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1... 48 0.006
dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1... 48 0.006
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003298.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|AC145808.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|AC148822.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|AQ290879.1|AQ290879 nbxb0021D13f CUGI Rice BAC Library O... 46 0.023
gb|AZ128145.1|AZ128145 OSJNBb0086N03f CUGI Rice BAC Library... 46 0.023
gb|CB667205.1|CB667205 OSJNEd14G23.r OSJNEd Oryza sativa (j... 46 0.023
gb|CB667323.1|CB667323 OSJNEd14J15.f OSJNEd Oryza sativa (j... 46 0.023
dbj|AP005711.1| Oryza sativa (japonica cultivar-group) chro... 46 0.023
dbj|AP006053.1| Oryza sativa (japonica cultivar-group) chro... 46 0.023
dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK064161.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK068504.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK102702.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK105581.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK106842.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK106925.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK108602.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK109631.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK109679.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK110992.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic seque... 46 0.023
gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 gen... 46 0.023
gb|AC134237.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|AC121490.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP005420.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP005579.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_107110.1| Oryza sativa (japonica cultivar-group) gen... 46 0.023
ref|NT_107114.1| Oryza sativa (japonica cultivar-group) 46 0.023
dbj|AP003074.2| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
dbj|AP005396.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|AACV01000574.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01005757.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01007211.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01008192.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01009793.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01010090.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01012111.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01013040.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01013614.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01017263.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01020012.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01020541.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01020542.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01022721.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 ... 46 0.023
dbj|AP006554.2| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP005659.2| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP004806.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP006584.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
ref|NM_185136.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.023
ref|XM_473126.1| Oryza sativa (japonica cultivar-group), p... 46 0.023
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NM_188775.1| Oryza sativa (japonica cultivar-group), p... 46 0.023
ref|XM_550648.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.023
dbj|AP002865.1| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromoso... 46 0.023
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 46 0.023
emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC... 46 0.023
gb|AC135459.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|CB678030.1|CB678030 OSJNEe15J03.r OSJNEe Oryza sativa (j... 44 0.092
gb|AC098836.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.092
dbj|AK067120.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.092
dbj|AK103700.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.092
dbj|AK107091.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.092
emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC O... 44 0.092
dbj|AP003913.3| Oryza sativa (japonica cultivar-group) geno... 44 0.092
gb|AC137608.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.092
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 44 0.092
>gb|CB674003.1|CB674003 OSJNEe08N08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08N08 3', mRNA sequence
Length = 843
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 803 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 744
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 743 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 684
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 683 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 624
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 623 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 564
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 563 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 504
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 503 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 444
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 443 gctctcaacagaattcagaacca 421
>dbj|AK065470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020L24, full
insert sequence
Length = 2391
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 1430 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 1489
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 1490 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 1549
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 1550 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 1609
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 1610 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 1669
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 1670 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 1729
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 1730 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 1789
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 1790 gctctcaacagaattcagaacca 1812
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0443D08
Length = 146670
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 20386 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 20327
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 20326 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 20267
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 20266 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 20207
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 20206 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 20147
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 20146 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 20087
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 20086 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 20027
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 20026 gctctcaacagaattcagaacca 20004
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 39813 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 39754
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 39753 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 39694
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 39693 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 39634
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 39633 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 39574
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 39573 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 39514
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 39513 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 39454
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 39453 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 39408
>gb|AACV01000148.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000148, whole
genome shotgun sequence
Length = 42841
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 10672 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 10731
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 10732 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 10791
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 10792 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 10851
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 10852 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 10911
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 10912 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 10971
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 10972 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 11031
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 11032 gctctcaacagaattcagaacca 11054
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 1955610 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 1955551
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 1955550 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 1955491
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 1955490 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 1955431
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 1955430 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 1955371
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 1955370 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 1955311
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 1955310 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 1955251
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 1955250 gctctcaacagaattcagaacca 1955228
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1975037 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1974978
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1974977 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1974918
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1974917 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1974858
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1974857 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1974798
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1974797 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 1974738
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 1974737 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 1974678
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 1974677 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 1974632
Score = 71.9 bits (36), Expect = 4e-010
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 227 tacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagcgacgtgtacagc 286
||||| || |||| ||| ||||| |||||| |||| ||||| |||||||| |||||||||
Sbjct: 28557584 tacgtggatccggagtatcaccaatgctaccagcttaccgacaagagcgatgtgtacagc 28557525
Query: 287 ttcggcgtcgtgctggtcgagctc 310
|||||||| || ||||| ||||||
Sbjct: 28557524 ttcggcgttgtcctggtggagctc 28557501
Score = 65.9 bits (33), Expect = 3e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgt 294
|||| ||||||||||||||||||||||||||||||||
Sbjct: 38394493 agctcaccgagaagagcgacgtgtacagcttcggcgt 38394529
Score = 60.0 bits (30), Expect = 2e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 255 acaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgct 300
|||| ||||| || |||||||||||||||||| |||||||||||||
Sbjct: 34943267 acaaactgacagacaagagcgacgtgtacagcctcggcgtcgtgct 34943222
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||| ||||||||
Sbjct: 3621355 aagagcgacgtgtacagcttcggagtcgtgct 3621386
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 270 agagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
|||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 9189686 agagcgacgtgttcagcttcggcgtcgtcctcctcgagctcgt 9189728
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||||||| |||||||| |||||
Sbjct: 6785982 gacgtgtacagcttcggcatcgtgctgttcgag 6786014
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcgg 291
||||||||||||||||||||||||
Sbjct: 43054960 gaagagcgacgtgtacagcttcgg 43054937
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||
Sbjct: 33072405 gacgtgtacagcttcggcgtcgtg 33072428
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||| ||||||||||||||| |||||| |||||| | ||||||
Sbjct: 8123497 gaagggcgacgtgtacagctacggcgtggtgctgctggagctc 8123455
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||| |||||| |||||| |||||
Sbjct: 42600257 cgacgtgtacagctacggcgtggtgctgctcgag 42600224
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 28557459 cgagatcaacctggccggcatggccatcaacaggatccagaa 28557418
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 273 gcgacgtgtacagcttcggcgtcgt 297
||||||| |||||||||||||||||
Sbjct: 40097178 gcgacgtctacagcttcggcgtcgt 40097202
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 281 tacagcttcggcgtcgtgctg 301
|||||||||||||||||||||
Sbjct: 33569857 tacagcttcggcgtcgtgctg 33569877
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctg 166
|||||||||||||||||||||
Sbjct: 31082663 aaggtcgccgactttgggctg 31082683
>ref|XM_462740.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3231
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 2527 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 2586
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 2587 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 2646
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 2647 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 2706
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 2707 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 2766
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 2767 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 2826
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 2827 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 2886
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 2887 gctctcaacagaattcagaacca 2909
>ref|XM_550053.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2391
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 1430 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 1489
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 1490 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 1549
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 1550 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 1609
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 1610 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 1669
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 1670 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 1729
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 1730 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 1789
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 1790 gctctcaacagaattcagaacca 1812
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 1955610 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 1955551
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 1955550 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 1955491
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 1955490 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 1955431
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 1955430 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 1955371
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 1955370 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 1955311
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 1955310 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 1955251
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 1955250 gctctcaacagaattcagaacca 1955228
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1975037 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1974978
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1974977 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1974918
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1974917 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1974858
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1974857 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1974798
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1974797 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 1974738
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 1974737 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 1974678
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 1974677 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 1974632
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||| ||||||||
Sbjct: 3621355 aagagcgacgtgtacagcttcggagtcgtgct 3621386
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 270 agagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
|||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 9189526 agagcgacgtgttcagcttcggcgtcgtcctcctcgagctcgt 9189568
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||||||| |||||||| |||||
Sbjct: 6785822 gacgtgtacagcttcggcatcgtgctgttcgag 6785854
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||| ||||||||||||||| |||||| |||||| | ||||||
Sbjct: 8123337 gaagggcgacgtgtacagctacggcgtggtgctgctggagctc 8123295
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 2007228 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 2007169
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 2007168 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 2007109
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 2007108 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 2007049
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 2007048 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 2006989
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 2006988 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 2006929
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 2006928 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 2006869
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 2006868 gctctcaacagaattcagaacca 2006846
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 2026647 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 2026588
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 2026587 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 2026528
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 2026527 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 2026468
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 2026467 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 2026408
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 2026407 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 2026348
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 2026347 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 2026288
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 2026287 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 2026242
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||| ||||||||
Sbjct: 3687553 aagagcgacgtgtacagcttcggagtcgtgct 3687584
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||||||| |||||||| |||||
Sbjct: 6871557 gacgtgtacagcttcggcatcgtgctgttcgag 6871589
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||| ||||||||||||||| |||||| |||||| | ||||||
Sbjct: 8176500 gaagggcgacgtgtacagctacggcgtggtgctgctggagctc 8176458
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 2007228 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 2007169
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 2007168 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 2007109
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 2007108 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 2007049
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 2007048 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 2006989
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 2006988 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 2006929
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 2006928 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 2006869
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 2006868 gctctcaacagaattcagaacca 2006846
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 2026647 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 2026588
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 2026587 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 2026528
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 2026527 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 2026468
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 2026467 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 2026408
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 2026407 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 2026348
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 2026347 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 2026288
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 2026287 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 2026242
Score = 71.9 bits (36), Expect = 4e-010
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 227 tacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagcgacgtgtacagc 286
||||| || |||| ||| ||||| |||||| |||| ||||| |||||||| |||||||||
Sbjct: 28141592 tacgtggatccggagtatcaccaatgctaccagcttaccgacaagagcgatgtgtacagc 28141533
Query: 287 ttcggcgtcgtgctggtcgagctc 310
|||||||| || ||||| ||||||
Sbjct: 28141532 ttcggcgttgtcctggtggagctc 28141509
Score = 65.9 bits (33), Expect = 3e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgt 294
|||| ||||||||||||||||||||||||||||||||
Sbjct: 37785307 agctcaccgagaagagcgacgtgtacagcttcggcgt 37785343
Score = 60.0 bits (30), Expect = 2e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 255 acaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgct 300
|||| ||||| || |||||||||||||||||| |||||||||||||
Sbjct: 34407061 acaaactgacagacaagagcgacgtgtacagcctcggcgtcgtgct 34407016
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||| ||||||||
Sbjct: 3687553 aagagcgacgtgtacagcttcggagtcgtgct 3687584
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||||||| |||||||| |||||
Sbjct: 6871557 gacgtgtacagcttcggcatcgtgctgttcgag 6871589
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcgg 291
||||||||||||||||||||||||
Sbjct: 42332751 gaagagcgacgtgtacagcttcgg 42332728
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||
Sbjct: 32641000 gacgtgtacagcttcggcgtcgtg 32641023
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||| ||||||||||||||| |||||| |||||| | ||||||
Sbjct: 8176500 gaagggcgacgtgtacagctacggcgtggtgctgctggagctc 8176458
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||| |||||| |||||| |||||
Sbjct: 41907550 cgacgtgtacagctacggcgtggtgctgctcgag 41907517
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 28141467 cgagatcaacctggccggcatggccatcaacaggatccagaa 28141426
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 273 gcgacgtgtacagcttcggcgtcgt 297
||||||| |||||||||||||||||
Sbjct: 39499570 gcgacgtctacagcttcggcgtcgt 39499594
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 281 tacagcttcggcgtcgtgctg 301
|||||||||||||||||||||
Sbjct: 33153384 tacagcttcggcgtcgtgctg 33153404
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctg 166
|||||||||||||||||||||
Sbjct: 30634175 aaggtcgccgactttgggctg 30634195
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 228 bits (115), Expect = 3e-057
Identities = 316/383 (82%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || || |||||||| |||||||| ||||| |||
Sbjct: 1957808 ggcctcacatggcctgtaagaatgacaattgcgatagaaacggctgaggcactggcatac 1957749
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || ||||||||||||||| |||||||||||
Sbjct: 1957748 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaacaacatattgctggacaac 1957689
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || |||||||||| ||| | ||||||||||
Sbjct: 1957688 aacttccatgtcaaagttgcggactttggactatcgcgcctgttcccgcttgaagtcacc 1957629
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 1957628 catgtatcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 1957569
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || ||||| ||||| || || ||| || | ||||| |
Sbjct: 1957568 tacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgatagagctaatt 1957509
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 1957508 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 1957449
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 1957448 gctctcaacagaattcagaacca 1957426
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1977235 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1977176
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1977175 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1977116
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1977115 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1977056
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1977055 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1976996
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1976995 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 1976936
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 1976935 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 1976876
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 1976875 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 1976830
Score = 71.9 bits (36), Expect = 4e-010
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 227 tacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagcgacgtgtacagc 286
||||| || |||| ||| ||||| |||||| |||| ||||| |||||||| |||||||||
Sbjct: 28476914 tacgtggatccggagtatcaccaatgctaccagcttaccgacaagagcgatgtgtacagc 28476855
Query: 287 ttcggcgtcgtgctggtcgagctc 310
|||||||| || ||||| ||||||
Sbjct: 28476854 ttcggcgttgtcctggtggagctc 28476831
Score = 65.9 bits (33), Expect = 3e-008
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgt 294
|||| ||||||||||||||||||||||||||||||||
Sbjct: 38313823 agctcaccgagaagagcgacgtgtacagcttcggcgt 38313859
Score = 60.0 bits (30), Expect = 2e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 255 acaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgct 300
|||| ||||| || |||||||||||||||||| |||||||||||||
Sbjct: 34862597 acaaactgacagacaagagcgacgtgtacagcctcggcgtcgtgct 34862552
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||| ||||||||
Sbjct: 3623553 aagagcgacgtgtacagcttcggagtcgtgct 3623584
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 270 agagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
|||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 9191904 agagcgacgtgttcagcttcggcgtcgtcctcctcgagctcgt 9191946
Score = 50.1 bits (25), Expect = 0.001
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||||||| |||||||| |||||
Sbjct: 6788200 gacgtgtacagcttcggcatcgtgctgttcgag 6788232
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcgg 291
||||||||||||||||||||||||
Sbjct: 42974290 gaagagcgacgtgtacagcttcgg 42974267
Score = 48.1 bits (24), Expect = 0.006
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||
Sbjct: 32991735 gacgtgtacagcttcggcgtcgtg 32991758
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||| ||||||||||||||| |||||| |||||| | ||||||
Sbjct: 8125715 gaagggcgacgtgtacagctacggcgtggtgctgctggagctc 8125673
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgag 307
|||||||||||||| |||||| |||||| |||||
Sbjct: 42519587 cgacgtgtacagctacggcgtggtgctgctcgag 42519554
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 28476789 cgagatcaacctggccggcatggccatcaacaggatccagaa 28476748
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 273 gcgacgtgtacagcttcggcgtcgt 297
||||||| |||||||||||||||||
Sbjct: 40016508 gcgacgtctacagcttcggcgtcgt 40016532
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 281 tacagcttcggcgtcgtgctg 301
|||||||||||||||||||||
Sbjct: 33489187 tacagcttcggcgtcgtgctg 33489207
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctg 166
|||||||||||||||||||||
Sbjct: 31001993 aaggtcgccgactttgggctg 31002013
>gb|CF304164.1|CF304164 ABF1--04-D22.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-D22, mRNA sequence
Length = 493
Score = 206 bits (104), Expect = 1e-050
Identities = 257/308 (83%)
Strand = Plus / Plus
Query: 89 atcatacaccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaag 148
|||||||||||||| || ||||||||||||||| |||||||||||| |||||| || ||
Sbjct: 20 atcatacaccgtgatgtcaagaccaacaacatattgctggacaacaacttccatgtcaaa 79
Query: 149 gtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtc 208
|| || |||||||| || |||||||||| ||| | |||||||||||| || || || ||
Sbjct: 80 gttgcggactttggactatcgcgcctgttcccgcttgaagtcacccatgtatcaactgtt 139
Query: 209 ccacagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgag 268
||||||||||| || || || || ||||| ||||||||||||||||||||||| |||||
Sbjct: 140 ccacagggcacaccagggtatgttgacccagtgtaccaccagtgctacaagctaaccgat 199
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagcc 328
||||| || ||||| ||||| || || ||| || | ||||| | ||||| || |||||
Sbjct: 200 aagagtgatgtgtatagctttggtgttgtgttgatagagctaatttcctcaaaaccagct 259
Query: 329 gtcgacatgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatc 388
|| |||||| |||||||||||| || || ||| |||| ||||||||||||||||||||
Sbjct: 260 gtggacatgtccaggagccacagtgacattaacttggctaacatggctctcaacagaatt 319
Query: 389 cagaacca 396
||||||||
Sbjct: 320 cagaacca 327
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13,
complete sequence
Length = 143386
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 9070 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 9129
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 9130 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 9189
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 9190 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 9249
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 9250 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 9309
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 9310 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 9369
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 9370 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 9429
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 9430 gctctcaacagaattcagaacca 9452
>gb|AACV01008434.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008434, whole
genome shotgun sequence
Length = 23862
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Minus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 11045 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 10986
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 10985 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 10926
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 10925 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 10866
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 10865 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 10806
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 10805 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 10746
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 10745 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 10686
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 10685 gctctcaacagaattcagaacca 10663
>ref|NT_107194.1| Oryza sativa (japonica cultivar-group)
Length = 2696338
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 788407 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 788466
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 788467 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 788526
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 788527 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 788586
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 788587 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 788646
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 788647 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 788706
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 788707 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 788766
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 788767 gctctcaacagaattcagaacca 788789
>gb|CH401182.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000019
genomic scaffold, whole genome shotgun sequence
Length = 1412315
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 747762 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 747821
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 747822 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 747881
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 747882 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 747941
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 747942 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 748001
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 748002 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 748061
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 748062 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 748121
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 748122 gctctcaacagaattcagaacca 748144
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 747762 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 747821
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 747822 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 747881
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 747882 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 747941
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 747942 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 748001
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 748002 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 748061
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 748062 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 748121
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 748122 gctctcaacagaattcagaacca 748144
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 260 ctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
||||| || |||||||||||||||||||||||||||||||||
Sbjct: 19013501 ctgacggacaagagcgacgtgtacagcttcggcgtcgtgctg 19013460
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 260 ctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
||||| || |||||||||||||||||||||||||||||||||
Sbjct: 19011436 ctgacggacaagagcgacgtgtacagcttcggcgtcgtgctg 19011395
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 23994859 agaagagcgacgtgtacagcttcggggtgctgctgctcgagctcgtg 23994813
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||| |||||||
Sbjct: 30175722 cgacgtgtacagcttcggcgtcgtgctcctcgagct 30175757
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||| |||||||
Sbjct: 30166248 cgacgtgtacagcttcggcgtcgtgctcctcgagct 30166213
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 273 gcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||| |||||||||||| |||||||| |||||||
Sbjct: 25989361 gcgacgtctacagcttcggcatcgtgctgctcgagct 25989397
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 agatcatacaccgtgacgtgaagaccaacaac 118
||||||||||||| ||||||||||||| ||||
Sbjct: 3313378 agatcatacaccgggacgtgaagaccagcaac 3313409
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||| ||| ||||||||| | ||||||
Sbjct: 22456040 agcgacgtgtacagctacggtgtcgtgctgctggagctc 22456078
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 268 gaagagcgacgtgtacagcttcggcgt 294
|||||||||||||||||||| ||||||
Sbjct: 18466490 gaagagcgacgtgtacagctacggcgt 18466516
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 266 gagaagagcgacgtgtacagcttcgg 291
|||||| |||||||||||||||||||
Sbjct: 30186771 gagaagtgcgacgtgtacagcttcgg 30186796
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 24137089 aagagcgacgtgtggagcttcggcgttgtgctg 24137057
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtc 295
|||||||||||||||||||||
Sbjct: 20648297 gacgtgtacagcttcggcgtc 20648317
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgt 294
|||||||||||||||||||||
Sbjct: 20130160 cgacgtgtacagcttcggcgt 20130140
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 215 ggcacgccgggctacgtcgacccgg 239
||||||||||||||| |||||||||
Sbjct: 10198859 ggcacgccgggctacctcgacccgg 10198835
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10,
complete sequence
Length = 105538
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 100549 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 100608
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 100609 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 100668
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 100669 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 100728
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 100729 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 100788
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 100789 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 100848
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 100849 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 100908
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 100909 gctctcaacagaattcagaacca 100931
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
complete sequence
Length = 35498469
Score = 204 bits (103), Expect = 4e-050
Identities = 313/383 (81%)
Strand = Plus / Plus
Query: 14 ggcctcacgtggcctcgaaggatgagcatcgccatagaaacagctgaggcgctggcgtac 73
|||||||| |||||| ||| |||| || ||||||||||| |||||||| ||||| |||
Sbjct: 788409 ggcctcacatggcctgtaagaatgacaattgccatagaaacggctgaggcactggcatac 788468
Query: 74 ctccacgcggtcgagatcatacaccgtgacgtgaagaccaacaacatactgctggacaac 133
|| || || || || |||||||||||||| || |||||||| |||||| |||| ||||||
Sbjct: 788469 cttcatgcagttgaaatcatacaccgtgatgtcaagaccaaaaacatattgctagacaac 788528
Query: 134 agcttccacgtgaaggtcgccgactttgggctgtcgcgcctgtaccctcctgaagtcacc 193
| |||||| || || || || |||||||| || || ||||||| ||| ||||||||||
Sbjct: 788529 aacttccatgtaaaagttgcggactttggactatcacgcctgttcccgtttgaagtcacc 788588
Query: 194 cacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgtaccaccagtgc 253
|| || || || || ||||||||||| || || || || ||||| |||||||||||||||
Sbjct: 788589 catgtctcaactgttccacagggcacaccagggtatgttgacccagtgtaccaccagtgc 788648
Query: 254 tacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
|||||||| ||||| ||||| || || |||||||| || || ||| || | ||||| |
Sbjct: 788649 tacaagctaaccgataagagtgatgtctacagctttggtgttgtgttgatagagctaatt 788708
Query: 314 tcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacctggccaacatg 373
||||| || ||||| || |||||| |||||||||||| || || ||| |||| ||||||
Sbjct: 788709 tcctcaaaaccagctgtggacatgtccaggagccacagtgacattaacttggctaacatg 788768
Query: 374 gctctcaacagaatccagaacca 396
|||||||||||||| ||||||||
Sbjct: 788769 gctctcaacagaattcagaacca 788791
Score = 67.9 bits (34), Expect = 6e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 260 ctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
||||| || |||||||||||||||||||||||||||||||||
Sbjct: 21887954 ctgacggacaagagcgacgtgtacagcttcggcgtcgtgctg 21887913
Score = 61.9 bits (31), Expect = 4e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgtg 313
||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 27032396 agaagagcgacgtgtacagcttcggggtgctgctgctcgagctcgtg 27032350
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||| |||||||
Sbjct: 33443380 cgacgtgtacagcttcggcgtcgtgctcctcgagct 33443415
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||| |||||||
Sbjct: 33433907 cgacgtgtacagcttcggcgtcgtgctcctcgagct 33433872
Score = 50.1 bits (25), Expect = 0.001
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 273 gcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||| |||||||||||| |||||||| |||||||
Sbjct: 29058857 gcgacgtctacagcttcggcatcgtgctgctcgagct 29058893
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||| ||| ||||||||| | ||||||
Sbjct: 25432032 agcgacgtgtacagctacggtgtcgtgctgctggagctc 25432070
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 268 gaagagcgacgtgtacagcttcggcgt 294
|||||||||||||||||||| ||||||
Sbjct: 21352257 gaagagcgacgtgtacagctacggcgt 21352283
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 266 gagaagagcgacgtgtacagcttcgg 291
|||||| |||||||||||||||||||
Sbjct: 33454429 gagaagtgcgacgtgtacagcttcgg 33454454
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||| | |||||||| ||||||
Sbjct: 28236666 gaagagcgacgtgtacgggttcggcgtggtgctg 28236633
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 27168814 aagagcgacgtgtggagcttcggcgttgtgctg 27168782
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtc 295
|||||||||||||||||||||
Sbjct: 23604781 gacgtgtacagcttcggcgtc 23604801
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 274 cgacgtgtacagcttcggcgt 294
|||||||||||||||||||||
Sbjct: 23095547 cgacgtgtacagcttcggcgt 23095527
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 215 ggcacgccgggctacgtcgacccgg 239
||||||||||||||| |||||||||
Sbjct: 12586938 ggcacgccgggctacctcgacccgg 12586914
>dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129P20, full
insert sequence
Length = 2362
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1550 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1609
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1610 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1669
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1670 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1729
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1730 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1789
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1790 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 1849
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 1850 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 1909
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 1910 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 1955
>gb|AACV01000149.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000149, whole
genome shotgun sequence
Length = 29509
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 20862 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 20921
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 20922 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 20981
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 20982 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 21041
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 21042 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 21101
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 21102 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 21161
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 21162 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 21221
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 21222 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 21267
>ref|XM_462744.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2310
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1720 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1779
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1780 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1839
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1840 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1899
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1900 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1959
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1960 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 2019
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 2020 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 2079
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 2080 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 2125
>ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2362
Score = 194 bits (98), Expect = 4e-047
Identities = 329/406 (81%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||||||||| |||||||| || || ||| | | |||||||||||||| |||
Sbjct: 1550 caccgcgacgtgaagacgaacaacatcctcctcgacgaagggttccacgtgaaggtggcc 1609
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || || |||| ||| | || | ||| |||||||| || | || |||
Sbjct: 1610 gacttcggcctctcccggctgttcccggcggacgccacgcacgtgtccacggcgccgcag 1669
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||||||||| ||| |||||||| ||||||||||||||||| ||||||| || ||||||
Sbjct: 1670 ggcacgccggggtacctcgacccgatgtaccaccagtgctaccagctgacggacaagagc 1729
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctcgtgtcctctaagccagccgtcgac 334
|||||||||||||||||||| ||||| ||||||||| | ||||| ||||| || || |||
Sbjct: 1730 gacgtgtacagcttcggcgtggtgctcgtcgagctcatctcctccaagccggcggtggac 1789
Query: 335 atgggcaggagccacagcgagatcaacctggccaacatggctctcaacagaatccagaac 394
||| | || || | |||| ||||||||||||||||||| | ||| ||||||| |
Sbjct: 1790 atgaaccggcgcggcggcgacgtcaacctggccaacatggccgtgcacatgatccagagc 1849
Query: 395 cacgaggtgggccagctggtcgaccctgagctcgggtacgagactgacggtgagacgaag 454
||||| ||| |||||||| ||||| |||||||||||| | | ||||| ||||||| |
Sbjct: 1850 tacgagatggagcagctggtggacccgcagctcgggtacgcgtcggacggcgagacgagg 1909
Query: 455 aaatccatagatctcgtcgctgagctggcgttccggtgcttgcagc 500
| | | ||||||||||| ||| |||||||||||||||||||||
Sbjct: 1910 aggacggtcgatctcgtcgccgaggtggcgttccggtgcttgcagc 1955
>gb|AU030772.1|AU030772 AU030772 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60216_2Z, mRNA sequence
Length = 646
Score = 129 bits (65), Expect = 2e-027
Identities = 176/213 (82%)
Strand = Plus / Plus
Query: 184 tgaagtcacccacgtgtcgaccgtcccacagggcacgccgggctacgtcgacccggtgta 243
|||||||||||| || || || || ||||||||||| || || || || ||||| |||||
Sbjct: 6 tgaagtcacccatgtatcaactgttccacagggcacaccagggtatgttgacccagtgta 65
Query: 244 ccaccagtgctacaagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggt 303
|||||||||||||||||| ||||| ||||| || ||||| ||||| || || ||| || |
Sbjct: 66 ccaccagtgctacaagctaaccgataagagtgatgtgtatagctttggtgttgtgttgat 125
Query: 304 cgagctcgtgtcctctaagccagccgtcgacatgggcaggagccacagcgagatcaacct 363
||||| | ||||| || ||||| || |||||| |||||||||||| || || ||| |
Sbjct: 126 agagctaatttcctcaaaaccagctgtggacatgtccaggagccacagtgacattaactt 185
Query: 364 ggccaacatggctctcaacagaatccagaacca 396
||| |||||||||||||||||||| ||||||||
Sbjct: 186 ggctaacatggctctcaacagaattcagaacca 218
>gb|CB670206.1|CB670206 OSJNEe03C20.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03C20 3', mRNA sequence
Length = 794
Score = 127 bits (64), Expect = 8e-027
Identities = 178/216 (82%)
Strand = Plus / Minus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| |||||||||||||| || || ||| || |||||||||||||||||||
Sbjct: 764 caccgcgacgtcaagaccaacaacatcctcctcgacgccaacttccacgtgaaggtcgcc 705
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || ||||| | ||| | ||| | ||| ||||| || |||| || |||
Sbjct: 704 gacttcggcctctcccgcctcttcccgcgtgacgccacgcacgtctccaccgcgccgcag 645
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
|||||||| || || || || |||| |||||||||||||||| |||| || || ||||||
Sbjct: 644 ggcacgccagggtatgtggatccggagtaccaccagtgctaccagctcacggacaagagc 585
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| ||||| || ||||||
Sbjct: 584 gatgtgtacagcttcggcgtggtgctcgtggagctc 549
>ref|XM_475858.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2739
Score = 127 bits (64), Expect = 8e-027
Identities = 178/216 (82%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| |||||||||||||| || || ||| || |||||||||||||||||||
Sbjct: 2164 caccgcgacgtcaagaccaacaacatcctcctcgacgccaacttccacgtgaaggtcgcc 2223
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
||||| || || || ||||| | ||| | ||| | ||| ||||| || |||| || |||
Sbjct: 2224 gacttcggcctctcccgcctcttcccgcgtgacgccacgcacgtctccaccgcgccgcag 2283
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
|||||||| || || || || |||| |||||||||||||||| |||| || || ||||||
Sbjct: 2284 ggcacgccagggtatgtggatccggagtaccaccagtgctaccagctcacggacaagagc 2343
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| ||||| || ||||||
Sbjct: 2344 gatgtgtacagcttcggcgtggtgctcgtggagctc 2379
>dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B19, full
insert sequence
Length = 3864
Score = 95.6 bits (48), Expect = 3e-017
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| ||||||| |||||| || || ||| | ||||||||| ||||||||
Sbjct: 3072 caccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgct 3131
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
|||||||| || || ||||| | ||| | || ||||| ||||| || |||| || |||
Sbjct: 3132 gactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccag 3191
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||| || || ||||| || |||| ||| ||||| |||||| |||| ||||| ||||||
Sbjct: 3192 ggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagc 3251
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| || ||||| ||||||
Sbjct: 3252 gatgtgtacagcttcggcgttgtcctggtggagctc 3287
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 3329 cgagatcaacctggccggcatggccatcaacaggatccagaa 3370
>dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107H09, full
insert sequence
Length = 2419
Score = 95.6 bits (48), Expect = 3e-017
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| ||||||| |||||| || || ||| | ||||||||| ||||||||
Sbjct: 1581 caccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgct 1640
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
|||||||| || || ||||| | ||| | || ||||| ||||| || |||| || |||
Sbjct: 1641 gactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccag 1700
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||| || || ||||| || |||| ||| ||||| |||||| |||| ||||| ||||||
Sbjct: 1701 ggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagc 1760
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| || ||||| ||||||
Sbjct: 1761 gatgtgtacagcttcggcgttgtcctggtggagctc 1796
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1838 cgagatcaacctggccggcatggccatcaacaggatccagaa 1879
>dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086H03, full
insert sequence
Length = 2351
Score = 95.6 bits (48), Expect = 3e-017
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| ||||||| |||||| || || ||| | ||||||||| ||||||||
Sbjct: 1512 caccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgct 1571
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
|||||||| || || ||||| | ||| | || ||||| ||||| || |||| || |||
Sbjct: 1572 gactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccag 1631
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||| || || ||||| || |||| ||| ||||| |||||| |||| ||||| ||||||
Sbjct: 1632 ggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagc 1691
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| || ||||| ||||||
Sbjct: 1692 gatgtgtacagcttcggcgttgtcctggtggagctc 1727
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1769 cgagatcaacctggccggcatggccatcaacaggatccagaa 1810
>ref|NM_192128.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2064
Score = 95.6 bits (48), Expect = 3e-017
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 95 caccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaaggtcgcc 154
||||| ||||| ||||||| |||||| || || ||| | ||||||||| ||||||||
Sbjct: 1477 caccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgct 1536
Query: 155 gactttgggctgtcgcgcctgtaccctcctgaagtcacccacgtgtcgaccgtcccacag 214
|||||||| || || ||||| | ||| | || ||||| ||||| || |||| || |||
Sbjct: 1537 gactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccag 1596
Query: 215 ggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaagagc 274
||||| || || ||||| || |||| ||| ||||| |||||| |||| ||||| ||||||
Sbjct: 1597 ggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagc 1656
Query: 275 gacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|| ||||||||||||||||| || ||||| ||||||
Sbjct: 1657 gatgtgtacagcttcggcgttgtcctggtggagctc 1692
Score = 44.1 bits (22), Expect = 0.092
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 352 cgagatcaacctggccaacatggctctcaacagaatccagaa 393
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1734 cgagatcaacctggccggcatggccatcaacaggatccagaa 1775
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
sequence
Length = 144487
Score = 89.7 bits (45), Expect = 2e-015
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||| ||||||||| ||||||| || | | ||||||| ||||||
Sbjct: 88098 cagggcacgccggggtacctcgacccggactaccaccggtcgttccagctgacggagaag 88039
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
||||||||||||||||||||||| ||| || | ||||||||
Sbjct: 88038 agcgacgtgtacagcttcggcgtggtggtgctggagctcgt 87998
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1308
Score = 89.7 bits (45), Expect = 2e-015
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||| ||||||||| ||||||| || | | ||||||| ||||||
Sbjct: 925 cagggcacgccggggtacctcgacccggactaccaccggtcgttccagctgacggagaag 984
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
||||||||||||||||||||||| ||| || | ||||||||
Sbjct: 985 agcgacgtgtacagcttcggcgtggtggtgctggagctcgt 1025
>ref|NT_107187.1| Oryza sativa (japonica cultivar-group)
Length = 2541880
Score = 89.7 bits (45), Expect = 2e-015
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||| ||||||||| ||||||| || | | ||||||| ||||||
Sbjct: 2335841 cagggcacgccggggtacctcgacccggactaccaccggtcgttccagctgacggagaag 2335900
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
||||||||||||||||||||||| ||| || | ||||||||
Sbjct: 2335901 agcgacgtgtacagcttcggcgtggtggtgctggagctcgt 2335941
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 89.7 bits (45), Expect = 2e-015
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||| ||||||||| ||||||| || | | ||||||| ||||||
Sbjct: 33246967 cagggcacgccggggtacctcgacccggactaccaccggtcgttccagctgacggagaag 33247026
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
||||||||||||||||||||||| ||| || | ||||||||
Sbjct: 33247027 agcgacgtgtacagcttcggcgtggtggtgctggagctcgt 33247067
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||||||||||| |||||||||| || | | || | || |||
Sbjct: 6560784 cagggcacgccggggtacgtcgaccctcagtaccaccagaacttccacctctcggacaag 6560843
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||||||||||||||||||||||| ||||||
Sbjct: 6560844 agcgacgtgtacagcttcggcgtcgtgctcgtcgag 6560879
Score = 71.9 bits (36), Expect = 4e-010
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
|||||||||||||||||||||||||||||||||| || ||| || |||||||
Sbjct: 12092234 agctgaccgagaagagcgacgtgtacagcttcggggtggtgatgctcgagct 12092285
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgt 297
||||| |||||||||||||||||||||||||||||
Sbjct: 24603197 accgacaagagcgacgtgtacagcttcggcgtcgt 24603163
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgt 297
||||| |||||||||||||||||||||||||||||
Sbjct: 24564709 accgacaagagcgacgtgtacagcttcggcgtcgt 24564675
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||| ||||||||||||
Sbjct: 14041504 aagagcgacgtgtacagctacggcgtcgtgct 14041535
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 265 cgagaagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||||||| || |||||
Sbjct: 6772783 cgagaagagcgacgtgtacagcttcggggtagtgct 6772748
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||| |||||||||| ||||||
Sbjct: 4160124 gaagagcgacgtgtacggcttcggcgtggtgctg 4160157
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
|||| ||||| ||||||||||| ||| |||||||||| | || |||||||||||
Sbjct: 34475651 agctcaccgacaagagcgacgtctactccttcggcgtcctcctcgtcgagctcgt 34475597
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||| ||||||||
Sbjct: 21547630 gacgtgtacagcttcggcctcgtgctg 21547656
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
|||||||||| || |||||||||||||| ||||| |||||||
Sbjct: 711653 agaagagcgatgtctacagcttcggcgtgctgctgctcgagct 711611
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctgtcgcg 171
|||||||||||||| |||||||||||
Sbjct: 6560712 aaggtcgccgacttcgggctgtcgcg 6560737
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 274 cgacgtgtacagcttcggcgt 294
|||||||||||||||||||||
Sbjct: 6405292 cgacgtgtacagcttcggcgt 6405312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 89.7 bits (45), Expect = 2e-015
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||| ||||||||| ||||||| || | | ||||||| ||||||
Sbjct: 33156457 cagggcacgccggggtacctcgacccggactaccaccggtcgttccagctgacggagaag 33156516
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
||||||||||||||||||||||| ||| || | ||||||||
Sbjct: 33156517 agcgacgtgtacagcttcggcgtggtggtgctggagctcgt 33156557
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||||||||||| |||||||||| || | | || | || |||
Sbjct: 6561571 cagggcacgccggggtacgtcgaccctcagtaccaccagaacttccacctctcggacaag 6561630
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||||||||||||||||||||||| ||||||
Sbjct: 6561631 agcgacgtgtacagcttcggcgtcgtgctcgtcgag 6561666
Score = 71.9 bits (36), Expect = 4e-010
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
|||||||||||||||||||||||||||||||||| || ||| || |||||||
Sbjct: 12095471 agctgaccgagaagagcgacgtgtacagcttcggggtggtgatgctcgagct 12095522
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgt 297
||||| |||||||||||||||||||||||||||||
Sbjct: 24686367 accgacaagagcgacgtgtacagcttcggcgtcgt 24686333
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgt 297
||||| |||||||||||||||||||||||||||||
Sbjct: 24647240 accgacaagagcgacgtgtacagcttcggcgtcgt 24647206
Score = 56.0 bits (28), Expect = 2e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||| ||||||||||||
Sbjct: 14046529 aagagcgacgtgtacagctacggcgtcgtgct 14046560
Score = 56.0 bits (28), Expect = 2e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 265 cgagaagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||||||| || |||||
Sbjct: 6773570 cgagaagagcgacgtgtacagcttcggggtagtgct 6773535
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 268 gaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||| |||||||||| ||||||
Sbjct: 4160015 gaagagcgacgtgtacggcttcggcgtggtgctg 4160048
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 258 agctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctcgt 312
|||| ||||| ||||||||||| ||| |||||||||| | || |||||||||||
Sbjct: 34385179 agctcaccgacaagagcgacgtctactccttcggcgtcctcctcgtcgagctcgt 34385125
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||| ||||||||
Sbjct: 21554601 gacgtgtacagcttcggcctcgtgctg 21554627
Score = 46.1 bits (23), Expect = 0.023
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
|||||||||| || |||||||||||||| ||||| |||||||
Sbjct: 711655 agaagagcgatgtctacagcttcggcgtgctgctgctcgagct 711613
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctgtcgcg 171
|||||||||||||| |||||||||||
Sbjct: 6561499 aaggtcgccgacttcgggctgtcgcg 6561524
Score = 42.1 bits (21), Expect = 0.36
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 274 cgacgtgtacagcttcggcgt 294
|||||||||||||||||||||
Sbjct: 6406079 cgacgtgtacagcttcggcgt 6406099
>gb|AQ161274.1|AQ161274 nbxb0006L07f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006L07f, DNA sequence
Length = 653
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 160 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 116
>dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124F01, full
insert sequence
Length = 1686
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1054 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 1010
>ref|NT_107234.1| Oryza sativa (japonica cultivar-group)
Length = 1126496
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 425707 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 425663
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 484852 gagaagagcgacgtgtacagcttcggcgttgtcctgctcgagct 484809
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 265 cgagaagagcgacgtgtacagcttcggcgtcgtgct 300
|||||||||||||||||| |||||||| || |||||
Sbjct: 1104757 cgagaagagcgacgtgtatagcttcggtgtggtgct 1104722
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 981498 aagagcgacgtgtggagcttcggcgtggtgctg 981466
Score = 42.1 bits (21), Expect = 0.36
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 309714 gagcgacgtctacggcttcggcgtcgtcctgctcgag 309678
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0018H04
Length = 142053
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 38461 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 38417
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 97606 gagaagagcgacgtgtacagcttcggcgttgtcctgctcgagct 97563
>gb|AACV01013012.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013012, whole
genome shotgun sequence
Length = 42705
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4055 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 4099
>gb|AACV01014884.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014884, whole
genome shotgun sequence
Length = 65563
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 28754 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 28798
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
clone:P0535G04
Length = 154180
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 91000 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 91044
>ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2265
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1816 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 1860
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2195120 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 2195164
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 272 agcgacgtgtacagcttcggcgtcgtg 298
||||||||| |||||||||||||||||
Sbjct: 2624558 agcgacgtgaacagcttcggcgtcgtg 2624532
Score = 42.1 bits (21), Expect = 0.36
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 88 gatcatacaccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaa 147
|||||| ||||| ||||| ||||||| |||||| || || ||| ||| |||| || ||
Sbjct: 1361645 gatcatccaccgcgacgtcaagaccaccaacatcctcctcgacgacaacttcgtcgcaaa 1361586
Query: 148 ggtcgccgactttgggctgtc 168
||| ||||||||||||||||
Sbjct: 1361585 ggtatccgactttgggctgtc 1361565
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10703218 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 10703174
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 10798418 gagaagagcgacgtgtacagcttcggcgttgtcctgctcgagct 10798375
Score = 58.0 bits (29), Expect = 6e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||||
Sbjct: 9884865 gcgacgtgtacagcttcggcgtcgtgctg 9884837
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||
Sbjct: 5886305 gacgtgtacagcttcggcgtcgtgctg 5886279
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 9915486 gcgacgtgtacagcttcggcgtcgtg 9915461
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 9905839 gcgacgtgtacagcttcggcgtcgtg 9905814
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||||| ||| || |||||
Sbjct: 4091610 accgagaagagcgacgtgtacagctacggggtggtgct 4091573
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||
Sbjct: 5869122 gacgtgtatagcttcggcgtcgtgctg 5869148
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgct 300
|||||||||||||||| |||||||| || |||||
Sbjct: 11386321 agaagagcgacgtgtatagcttcggtgtggtgct 11386288
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 11264304 aagagcgacgtgtggagcttcggcgtggtgctg 11264272
Score = 42.1 bits (21), Expect = 0.36
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 10584261 gagcgacgtctacggcttcggcgtcgtcctgctcgag 10584225
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2169973 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 2170017
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 261 tgaccgagaagagcgacgtgtacagcttcggcgt 294
||||||||||| ||||||||||||||||||||||
Sbjct: 7327096 tgaccgagaagtgcgacgtgtacagcttcggcgt 7327063
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgt 297
|||||||||||||||||||||||||||
Sbjct: 5065288 gagcgacgtgtacagcttcggcgtcgt 5065262
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 261 tgaccgagaagagcgacgtgtacagcttcggc 292
|||| |||||| ||||||||||||||||||||
Sbjct: 7323660 tgacggagaagtgcgacgtgtacagcttcggc 7323629
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 272 agcgacgtgtacagcttcggcgtcgtg 298
||||||||| |||||||||||||||||
Sbjct: 2555372 agcgacgtgaacagcttcggcgtcgtg 2555346
Score = 42.1 bits (21), Expect = 0.36
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgt 297
|||||||| ||||||||||| ||||||||
Sbjct: 3396134 aagagcgatgtgtacagctttggcgtcgt 3396106
Score = 42.1 bits (21), Expect = 0.36
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 88 gatcatacaccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaa 147
|||||| ||||| ||||| ||||||| |||||| || || ||| ||| |||| || ||
Sbjct: 1337133 gatcatccaccgcgacgtcaagaccaccaacatcctcctcgacgacaacttcgtcgcaaa 1337074
Query: 148 ggtcgccgactttgggctgtc 168
||| ||||||||||||||||
Sbjct: 1337073 ggtatccgactttgggctgtc 1337053
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 28401955 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 28401911
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2169973 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 2170017
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 28497155 gagaagagcgacgtgtacagcttcggcgttgtcctgctcgagct 28497112
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 261 tgaccgagaagagcgacgtgtacagcttcggcgt 294
||||||||||| ||||||||||||||||||||||
Sbjct: 7327096 tgaccgagaagtgcgacgtgtacagcttcggcgt 7327063
Score = 58.0 bits (29), Expect = 6e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||||
Sbjct: 27583602 gcgacgtgtacagcttcggcgtcgtgctg 27583574
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||
Sbjct: 23585042 gacgtgtacagcttcggcgtcgtgctg 23585016
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgt 297
|||||||||||||||||||||||||||
Sbjct: 5065288 gagcgacgtgtacagcttcggcgtcgt 5065262
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 27614223 gcgacgtgtacagcttcggcgtcgtg 27614198
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 27604576 gcgacgtgtacagcttcggcgtcgtg 27604551
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||||| ||| || |||||
Sbjct: 21790347 accgagaagagcgacgtgtacagctacggggtggtgct 21790310
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 261 tgaccgagaagagcgacgtgtacagcttcggc 292
|||| |||||| ||||||||||||||||||||
Sbjct: 7323660 tgacggagaagtgcgacgtgtacagcttcggc 7323629
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||
Sbjct: 23567859 gacgtgtatagcttcggcgtcgtgctg 23567885
Score = 46.1 bits (23), Expect = 0.023
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtc 295
|||||||||||||||||||||||
Sbjct: 10291227 gcgacgtgtacagcttcggcgtc 10291205
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 272 agcgacgtgtacagcttcggcgtcgtg 298
||||||||| |||||||||||||||||
Sbjct: 2555372 agcgacgtgaacagcttcggcgtcgtg 2555346
Score = 44.1 bits (22), Expect = 0.092
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 267 agaagagcgacgtgtacagcttcggcgtcgtgct 300
|||||||||||||||| |||||||| || |||||
Sbjct: 29085058 agaagagcgacgtgtatagcttcggtgtggtgct 29085025
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 28963041 aagagcgacgtgtggagcttcggcgtggtgctg 28963009
Score = 42.1 bits (21), Expect = 0.36
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 28282998 gagcgacgtctacggcttcggcgtcgtcctgctcgag 28282962
Score = 42.1 bits (21), Expect = 0.36
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgt 297
|||||||| ||||||||||| ||||||||
Sbjct: 3396134 aagagcgatgtgtacagctttggcgtcgt 3396106
Score = 42.1 bits (21), Expect = 0.36
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 88 gatcatacaccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaa 147
|||||| ||||| ||||| ||||||| |||||| || || ||| ||| |||| || ||
Sbjct: 1337133 gatcatccaccgcgacgtcaagaccaccaacatcctcctcgacgacaacttcgtcgcaaa 1337074
Query: 148 ggtcgccgactttgggctgtc 168
||| ||||||||||||||||
Sbjct: 1337073 ggtatccgactttgggctgtc 1337053
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagctc 310
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 29275663 gagaagagcgacgtgtacagcttcggcgtcgtgctgctcgagctc 29275619
Score = 81.8 bits (41), Expect = 4e-013
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 257 aagctgaccgagaagagcgacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2231543 aagctgacggagaagagcgacgtgtacagcttcggcgtcgtgctg 2231587
Score = 63.9 bits (32), Expect = 1e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 266 gagaagagcgacgtgtacagcttcggcgtcgtgctggtcgagct 309
||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 29334808 gagaagagcgacgtgtacagcttcggcgttgtcctgctcgagct 29334765
Score = 60.0 bits (30), Expect = 2e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 261 tgaccgagaagagcgacgtgtacagcttcggcgt 294
||||||||||| ||||||||||||||||||||||
Sbjct: 7337075 tgaccgagaagtgcgacgtgtacagcttcggcgt 7337042
Score = 58.0 bits (29), Expect = 6e-006
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||||
Sbjct: 28484305 gcgacgtgtacagcttcggcgtcgtgctg 28484277
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||||||||||||||||||||||
Sbjct: 24524214 gacgtgtacagcttcggcgtcgtgctg 24524188
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgt 297
|||||||||||||||||||||||||||
Sbjct: 5208299 gagcgacgtgtacagcttcggcgtcgt 5208273
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 28515241 gcgacgtgtacagcttcggcgtcgtg 28515216
Score = 52.0 bits (26), Expect = 4e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtcgtg 298
||||||||||||||||||||||||||
Sbjct: 28505595 gcgacgtgtacagcttcggcgtcgtg 28505570
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 263 accgagaagagcgacgtgtacagcttcggcgtcgtgct 300
||||||||||||||||||||||||| ||| || |||||
Sbjct: 22761737 accgagaagagcgacgtgtacagctacggggtggtgct 22761700
Score = 48.1 bits (24), Expect = 0.006
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 265 cgagaagagcgacgtgtacagcttcggcgtcgtgct 300
|||||||||||||||||| |||||||| || |||||
Sbjct: 29954713 cgagaagagcgacgtgtatagcttcggtgtggtgct 29954678
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 275 gacgtgtacagcttcggcgtcgtgctg 301
|||||||| ||||||||||||||||||
Sbjct: 24507061 gacgtgtatagcttcggcgtcgtgctg 24507087
Score = 46.1 bits (23), Expect = 0.023
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 273 gcgacgtgtacagcttcggcgtc 295
|||||||||||||||||||||||
Sbjct: 10313630 gcgacgtgtacagcttcggcgtc 10313608
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 272 agcgacgtgtacagcttcggcgtcgtg 298
||||||||| |||||||||||||||||
Sbjct: 2660883 agcgacgtgaacagcttcggcgtcgtg 2660857
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgtgctg 301
||||||||||||| ||||||||||| ||||||
Sbjct: 29831454 aagagcgacgtgtggagcttcggcgtggtgctg 29831422
Score = 42.1 bits (21), Expect = 0.36
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 271 gagcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||| ||| ||||||||||||| ||| |||||
Sbjct: 29159670 gagcgacgtctacggcttcggcgtcgtcctgctcgag 29159634
Score = 42.1 bits (21), Expect = 0.36
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 269 aagagcgacgtgtacagcttcggcgtcgt 297
|||||||| ||||||||||| ||||||||
Sbjct: 3514556 aagagcgatgtgtacagctttggcgtcgt 3514528
Score = 42.1 bits (21), Expect = 0.36
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 88 gatcatacaccgtgacgtgaagaccaacaacatactgctggacaacagcttccacgtgaa 147
|||||| ||||| ||||| ||||||| |||||| || || ||| ||| |||| || ||
Sbjct: 1398068 gatcatccaccgcgacgtcaagaccaccaacatcctcctcgacgacaacttcgtcgcaaa 1398009
Query: 148 ggtcgccgactttgggctgtc 168
||| ||||||||||||||||
Sbjct: 1398008 ggtatccgactttgggctgtc 1397988
>dbj|AK101690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059I12, full
insert sequence
Length = 2260
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||||||||||| |||||||||| || | | || | || |||
Sbjct: 1512 cagggcacgccggggtacgtcgaccctcagtaccaccagaacttccacctctcggacaag 1571
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||||||||||||||||||||||| ||||||
Sbjct: 1572 agcgacgtgtacagcttcggcgtcgtgctcgtcgag 1607
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctgtcgcg 171
|||||||||||||| |||||||||||
Sbjct: 1440 aaggtcgccgacttcgggctgtcgcg 1465
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02,
complete sequence
Length = 162425
Score = 79.8 bits (40), Expect = 2e-012
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 212 cagggcacgccgggctacgtcgacccggtgtaccaccagtgctacaagctgaccgagaag 271
|||||||||||||| ||||||||||| |||||||||| || | | || | || |||
Sbjct: 104333 cagggcacgccggggtacgtcgaccctcagtaccaccagaacttccacctctcggacaag 104392
Query: 272 agcgacgtgtacagcttcggcgtcgtgctggtcgag 307
||||||||||||||||||||||||||||| ||||||
Sbjct: 104393 agcgacgtgtacagcttcggcgtcgtgctcgtcgag 104428
Score = 44.1 bits (22), Expect = 0.092
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 aaggtcgccgactttgggctgtcgcg 171
|||||||||||||| |||||||||||
Sbjct: 104261 aaggtcgccgacttcgggctgtcgcg 104286
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 538,932
Number of Sequences: 438736
Number of extensions: 538932
Number of successful extensions: 4523
Number of sequences better than 0.5: 614
Number of HSP's better than 0.5 without gapping: 741
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2034
Number of HSP's gapped (non-prelim): 2456
length of query: 644
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 623
effective length of database: 2,791,206,460
effective search space: 1738921624580
effective search space used: 1738921624580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)