BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAZ3f05.yg.3.1
(1626 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK061950.1| Oryza sativa (japonica cultivar-group) cDNA... 1047 0.0
dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA... 1047 0.0
dbj|AK102653.1| Oryza sativa (japonica cultivar-group) cDNA... 1047 0.0
dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA... 1039 0.0
dbj|AK120149.1| Oryza sativa (japonica cultivar-group) cDNA... 1031 0.0
gb|CB647700.1|CB647700 OSJNEb10L19.r OSJNEb Oryza sativa (j... 383 e-103
gb|C25033.1|C25033 C25033 Rice shoot Oryza sativa (japonica... 339 3e-090
gb|CF304074.1|CF304074 ABF1--03-P23.g1 ABF3-overexpressing ... 325 4e-086
gb|CB648976.1|CB648976 OSJNEb12K12.f OSJNEb Oryza sativa (j... 254 1e-064
gb|CB638487.1|CB638487 OSJNEa06N09.r OSJNEa Oryza sativa (j... 242 5e-061
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 143 3e-031
gb|AACV01023263.1| Oryza sativa (japonica cultivar-group) c... 143 3e-031
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 143 3e-031
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 143 3e-031
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 143 3e-031
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 143 3e-031
gb|CB638523.1|CB638523 OSJNEa06O08.f OSJNEa Oryza sativa (j... 90 4e-015
dbj|AG214404.1| Oryza sativa (japonica cultivar-group) DNA,... 88 2e-014
gb|CB638524.1|CB638524 OSJNEa06O08.r OSJNEa Oryza sativa (j... 52 0.001
gb|CB645682.1|CB645682 OSJNEb07I23.f OSJNEb Oryza sativa (j... 48 0.015
>dbj|AK061950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E10, full
insert sequence
Length = 1759
Score = 1047 bits (528), Expect = 0.0
Identities = 1075/1256 (85%), Gaps = 1/1256 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 240 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 299
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 300 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 359
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 360 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 419
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 420 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 479
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 480 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 539
Query: 346 gataaattcatggatttatcagattaccaggcgtttacaaggagaaggactttttggaaa 405
||| ||| ||||||| |||||||| | ||| |||||||| | ||||||| | |||| |
Sbjct: 540 gattaatccatggatatatcagatcaacaga-gtttacaaaggaaaggactatgtggaga 598
Query: 406 ctgaatttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactg 465
|||||||||||||||| || |||||||| ||||||||||||||||||||| || | ||||
Sbjct: 599 ctgaatttatagttggaccaataccagtggatgatggaaatggaaaagaactatccactg 658
Query: 466 aaattgttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatt 525
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 659 aagtcgttacaaacatggcaacaaacaaaacattttacactgattccagtggacgtgact 718
Query: 526 tcatcaaaaggataagagattatcgatcggagtggaagattgaagtgcaccagcctattg 585
|||||||||||||| | ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 719 tcatcaaaaggatacgggattaccggtcagagtggaagatcgaagtgcaccagcctatcg 778
Query: 586 ctggaaactattatcctgttaatcttggcatctatgtggaggatggcagcaaagagctgt 645
||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| | |
Sbjct: 779 ctggaaactattatcctgttaatcttggcatttatgtggaagatggaagcagagagttat 838
Query: 646 ctgtactggtagacaggtcaattggaggttccagtataaaggatggacaaatagagctaa 705
|| |||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||
Sbjct: 839 ctatacttgtagacaggtctgttggaggtgccagcataaaggatggacagatagagctaa 898
Query: 706 tgctacacaggaggctactccatgatgatgggaaaggcgtcgccgaggcgctaaatgaaa 765
||||||||||||| ||||| ||||||||||| || || || ||||| |||||||||
Sbjct: 899 tgctacacaggagactacttcatgatgatggtcgtggtgttgcagaggcattaaatgaaa 958
Query: 766 cagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatactatgtcaaaa 825
|| |||| | ||||| |||||||||||||| |||| |||||||| || ||| ||||||
Sbjct: 959 caacctgttttgataatcaatgtgaaggactagttattcaaggaaagtattatctcaaaa 1018
Query: 826 tagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaatatactccc 885
| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1019 ttgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaatatactccc 1078
Query: 886 ctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcacatgttgcaa 945
|||| ||| ||||||| |||||||||||||||| || |||| ||||||||| ||| |||
Sbjct: 1079 ctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcacacgttacaa 1138
Query: 946 aattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgcttacccttc 1005
|||||||||| |||||| | | |||||||||||||||||||||||| ||||||| ||||
Sbjct: 1139 aattctctgcaatggatccggcctacagcttgcctgataatgttgcattgcttactcttc 1198
Query: 1006 aggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggagg 1065
|||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 1199 aggaacttgaagacggaactgttcttcttcggttggctcacctatacgaggctggagagc 1258
Query: 1066 acaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccggagaagaaga 1125
||||||||||||| || |||| || ||||||| |||||||| || || || |||||||
Sbjct: 1259 acaaggatctttcagctctagctagcgtcgacctgaagagagtatttccagacaagaaga 1318
Query: 1126 ttggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatggagaaga 1185
||| |||| | | ||||||||| |||| || ||||||||||| ||||||||||||| |
Sbjct: 1319 ttgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatggagaaaa 1378
Query: 1186 agcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttcggggtggcc 1245
|| | |||| ||||||| | |||| || | || || || ||| | || ||||| ||||
Sbjct: 1379 agaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtccggggaggcc 1438
Query: 1246 ctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgcacattc 1301
| || |||||||| |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 1439 ccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgcacattc 1494
>dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H23, full
insert sequence
Length = 3413
Score = 1047 bits (528), Expect = 0.0
Identities = 1075/1256 (85%), Gaps = 1/1256 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 1893 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 1952
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 1953 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 2012
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 2013 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 2072
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 2073 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 2132
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 2133 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 2192
Query: 346 gataaattcatggatttatcagattaccaggcgtttacaaggagaaggactttttggaaa 405
||| ||| ||||||| |||||||| | ||| |||||||| | ||||||| | |||| |
Sbjct: 2193 gattaatccatggatatatcagatcaacaga-gtttacaaaggaaaggactatgtggaga 2251
Query: 406 ctgaatttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactg 465
|||||||||||||||| || |||||||| ||||||||||||||||||||| || | ||||
Sbjct: 2252 ctgaatttatagttggaccaataccagtggatgatggaaatggaaaagaactatccactg 2311
Query: 466 aaattgttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatt 525
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 2312 aagtcgttacaaacatggcaacaaacaaaacattttacactgattccagtggacgtgact 2371
Query: 526 tcatcaaaaggataagagattatcgatcggagtggaagattgaagtgcaccagcctattg 585
|||||||||||||| | ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 2372 tcatcaaaaggatacgggattaccggtcagagtggaagatcgaagtgcaccagcctatcg 2431
Query: 586 ctggaaactattatcctgttaatcttggcatctatgtggaggatggcagcaaagagctgt 645
||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| | |
Sbjct: 2432 ctggaaactattatcctgttaatcttggcatttatgtggaagatggaagcagagagttat 2491
Query: 646 ctgtactggtagacaggtcaattggaggttccagtataaaggatggacaaatagagctaa 705
|| |||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||
Sbjct: 2492 ctatacttgtagacaggtctgttggaggtgccagcataaaggatggacagatagagctaa 2551
Query: 706 tgctacacaggaggctactccatgatgatgggaaaggcgtcgccgaggcgctaaatgaaa 765
||||||||||||| ||||| ||||||||||| || || || ||||| |||||||||
Sbjct: 2552 tgctacacaggagactacttcatgatgatggtcgtggtgttgcagaggcattaaatgaaa 2611
Query: 766 cagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatactatgtcaaaa 825
|| |||| | ||||| |||||||||||||| |||| |||||||| || ||| ||||||
Sbjct: 2612 caacctgttttgataatcaatgtgaaggactagttattcaaggaaagtattatctcaaaa 2671
Query: 826 tagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaatatactccc 885
| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 2672 ttgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaatatactccc 2731
Query: 886 ctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcacatgttgcaa 945
|||| ||| ||||||| |||||||||||||||| || |||| ||||||||| ||| |||
Sbjct: 2732 ctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcacacgttacaa 2791
Query: 946 aattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgcttacccttc 1005
|||||||||| |||||| | | |||||||||||||||||||||||| ||||||| ||||
Sbjct: 2792 aattctctgcaatggatccggcctacagcttgcctgataatgttgcattgcttactcttc 2851
Query: 1006 aggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggagg 1065
|||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 2852 aggaacttgaagacggaactgttcttcttcggttggctcacctatacgaggctggagagc 2911
Query: 1066 acaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccggagaagaaga 1125
||||||||||||| || |||| || ||||||| |||||||| || || || |||||||
Sbjct: 2912 acaaggatctttcagctctagctagcgtcgacctgaagagagtatttccagacaagaaga 2971
Query: 1126 ttggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatggagaaga 1185
||| |||| | | ||||||||| |||| || ||||||||||| ||||||||||||| |
Sbjct: 2972 ttgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatggagaaaa 3031
Query: 1186 agcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttcggggtggcc 1245
|| | |||| ||||||| | |||| || | || || || ||| | || ||||| ||||
Sbjct: 3032 agaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtccggggaggcc 3091
Query: 1246 ctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgcacattc 1301
| || |||||||| |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 3092 ccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgcacattc 3147
>dbj|AK102653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101E19, full
insert sequence
Length = 2123
Score = 1047 bits (528), Expect = 0.0
Identities = 1075/1256 (85%), Gaps = 1/1256 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 603 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 662
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 663 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 722
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 723 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 782
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 783 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 842
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 843 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 902
Query: 346 gataaattcatggatttatcagattaccaggcgtttacaaggagaaggactttttggaaa 405
||| ||| ||||||| |||||||| | ||| |||||||| | ||||||| | |||| |
Sbjct: 903 gattaatccatggatatatcagatcaacaga-gtttacaaaggaaaggactatgtggaga 961
Query: 406 ctgaatttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactg 465
|||||||||||||||| || |||||||| ||||||||||||||||||||| || | ||||
Sbjct: 962 ctgaatttatagttggaccaataccagtggatgatggaaatggaaaagaactatccactg 1021
Query: 466 aaattgttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatt 525
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1022 aagtcgttacaaacatggcaacaaacaaaacattttacactgattccagtggacgtgact 1081
Query: 526 tcatcaaaaggataagagattatcgatcggagtggaagattgaagtgcaccagcctattg 585
|||||||||||||| | ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 1082 tcatcaaaaggatacgggattaccggtcagagtggaagatcgaagtgcaccagcctatcg 1141
Query: 586 ctggaaactattatcctgttaatcttggcatctatgtggaggatggcagcaaagagctgt 645
||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| | |
Sbjct: 1142 ctggaaactattatcctgttaatcttggcatttatgtggaagatggaagcagagagttat 1201
Query: 646 ctgtactggtagacaggtcaattggaggttccagtataaaggatggacaaatagagctaa 705
|| |||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||
Sbjct: 1202 ctatacttgtagacaggtctgttggaggtgccagcataaaggatggacagatagagctaa 1261
Query: 706 tgctacacaggaggctactccatgatgatgggaaaggcgtcgccgaggcgctaaatgaaa 765
||||||||||||| ||||| ||||||||||| || || || ||||| |||||||||
Sbjct: 1262 tgctacacaggagactacttcatgatgatggtcgtggtgttgcagaggcattaaatgaaa 1321
Query: 766 cagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatactatgtcaaaa 825
|| |||| | ||||| |||||||||||||| |||| |||||||| || ||| ||||||
Sbjct: 1322 caacctgttttgataatcaatgtgaaggactagttattcaaggaaagtattatctcaaaa 1381
Query: 826 tagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaatatactccc 885
| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 1382 ttgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaatatactccc 1441
Query: 886 ctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcacatgttgcaa 945
|||| ||| ||||||| |||||||||||||||| || |||| ||||||||| ||| |||
Sbjct: 1442 ctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcacacgttacaa 1501
Query: 946 aattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgcttacccttc 1005
|||||||||| |||||| | | |||||||||||||||||||||||| ||||||| ||||
Sbjct: 1502 aattctctgcaatggatccggcctacagcttgcctgataatgttgcattgcttactcttc 1561
Query: 1006 aggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggagg 1065
|||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 1562 aggaacttgaagacggaactgttcttcttcggttggctcacctatacgaggctggagagc 1621
Query: 1066 acaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccggagaagaaga 1125
||||||||||||| || |||| || ||||||| |||||||| || || || |||||||
Sbjct: 1622 acaaggatctttcagctctagctagcgtcgacctgaagagagtatttccagacaagaaga 1681
Query: 1126 ttggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatggagaaga 1185
||| |||| | | ||||||||| |||| || ||||||||||| ||||||||||||| |
Sbjct: 1682 ttgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatggagaaaa 1741
Query: 1186 agcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttcggggtggcc 1245
|| | |||| ||||||| | |||| || | || || || ||| | || ||||| ||||
Sbjct: 1742 agaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtccggggaggcc 1801
Query: 1246 ctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgcacattc 1301
| || |||||||| |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 1802 ccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgcacattc 1857
>dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020C01, full
insert sequence
Length = 3367
Score = 1039 bits (524), Expect = 0.0
Identities = 1074/1256 (85%), Gaps = 1/1256 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 1847 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 1906
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 1907 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagacaca 1966
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 1967 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 2026
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 2027 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 2086
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 2087 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 2146
Query: 346 gataaattcatggatttatcagattaccaggcgtttacaaggagaaggactttttggaaa 405
||| ||| ||||||| |||||||| | ||| |||||||| | ||||||| | |||| |
Sbjct: 2147 gattaatccatggatatatcagatcaacaga-gtttacaaaggaaaggactatgtggaga 2205
Query: 406 ctgaatttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactg 465
|||||||||||||||| || |||||||| ||||||||||||||||||||| || | ||||
Sbjct: 2206 ctgaatttatagttggaccaataccagtggatgatggaaatggaaaagaactatccactg 2265
Query: 466 aaattgttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatt 525
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 2266 aagtcgttacaaacatggcaacaaacaaaacattttacactgattccagtggacgtgact 2325
Query: 526 tcatcaaaaggataagagattatcgatcggagtggaagattgaagtgcaccagcctattg 585
|||||||||||||| | ||||| || || ||||||| ||| ||||||||||||||||| |
Sbjct: 2326 tcatcaaaaggatacgggattaccggtcagagtggaggatcgaagtgcaccagcctatcg 2385
Query: 586 ctggaaactattatcctgttaatcttggcatctatgtggaggatggcagcaaagagctgt 645
||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| | |
Sbjct: 2386 ctggaaactattatcctgttaatcttggcatttatgtggaagatggaagcagagagttat 2445
Query: 646 ctgtactggtagacaggtcaattggaggttccagtataaaggatggacaaatagagctaa 705
|| |||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||
Sbjct: 2446 ctatacttgtagacaggtctgttggaggtgccagcataaaggatggacagatagagctaa 2505
Query: 706 tgctacacaggaggctactccatgatgatgggaaaggcgtcgccgaggcgctaaatgaaa 765
||||||||||||| ||||| ||||||||||| || || || ||||| |||||||||
Sbjct: 2506 tgctacacaggagactacttcatgatgatggtcgtggtgttgcagaggcattaaatgaaa 2565
Query: 766 cagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatactatgtcaaaa 825
|| |||| | ||||| |||||||||||||| |||| |||||||| || ||| ||||||
Sbjct: 2566 caacctgttttgataatcaatgtgaaggactagttattcaaggaaagtattatctcaaaa 2625
Query: 826 tagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaatatactccc 885
| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 2626 ttgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaatatactccc 2685
Query: 886 ctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcacatgttgcaa 945
|||| ||| ||||||| |||||||||||||||| || |||| ||||||||| ||| |||
Sbjct: 2686 ctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcacacgttacaa 2745
Query: 946 aattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgcttacccttc 1005
|||||||||| |||||| | | |||||||||||||||||||||||| ||||||| ||||
Sbjct: 2746 aattctctgcaatggatccggcctacagcttgcctgataatgttgcattgcttactcttc 2805
Query: 1006 aggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggagg 1065
|||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 2806 aggaacttgaagacggaactgttcttcttcggttggctcacctatacgaggctggagagc 2865
Query: 1066 acaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccggagaagaaga 1125
||||||||||||| || |||| || ||||||| |||||||| || || || |||||||
Sbjct: 2866 acaaggatctttcagctctagctagcgtcgacctgaagagagtatttccagacaagaaga 2925
Query: 1126 ttggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatggagaaga 1185
||| |||| | | ||||||||| |||| || ||||||||||| ||||||||||||| |
Sbjct: 2926 ttgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatggagaaaa 2985
Query: 1186 agcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttcggggtggcc 1245
|| | |||| ||||||| | |||| || | || || || ||| | || ||||| ||||
Sbjct: 2986 agaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtccggggaggcc 3045
Query: 1246 ctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgcacattc 1301
| || |||||||| |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 3046 ccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgcacattc 3101
>dbj|AK120149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029J19, full
insert sequence
Length = 2926
Score = 1031 bits (520), Expect = 0.0
Identities = 1074/1256 (85%), Gaps = 2/1256 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 1422 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 1481
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||| | |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 1482 gttgaaacttcaa-acaatgcagctggagcattatctctgtactccaatagtaagaccca 1540
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 1541 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 1600
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 1601 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 1660
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 1661 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 1720
Query: 346 gataaattcatggatttatcagattaccaggcgtttacaaggagaaggactttttggaaa 405
||| ||| ||||||| |||||||| | ||| |||||||| | ||||||| | |||| |
Sbjct: 1721 gattaatccatggatatatcagatcaacaga-gtttacaaaggaaaggactatgtggaga 1779
Query: 406 ctgaatttatagttgggcccataccagtagatgatggaaatggaaaagaagtagcaactg 465
|||||||||||||||| || |||||||| ||||||||||||||||||||| || | ||||
Sbjct: 1780 ctgaatttatagttggaccaataccagtggatgatggaaatggaaaagaactatccactg 1839
Query: 466 aaattgttacaaacatggtgacaaacaaaacattctacactgattccagtggacgtgatt 525
|| | ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1840 aagtcgttacaaacatggcaacaaacaaaacattttacactgattccagtggacgtgact 1899
Query: 526 tcatcaaaaggataagagattatcgatcggagtggaagattgaagtgcaccagcctattg 585
|||||||||||||| | ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 1900 tcatcaaaaggatacgggattaccggtcagagtggaagatcgaagtgcaccagcctatcg 1959
Query: 586 ctggaaactattatcctgttaatcttggcatctatgtggaggatggcagcaaagagctgt 645
||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| | |
Sbjct: 1960 ctggaaactattatcctgttaatcttggcatttatgtggaagatggaagcagagagttat 2019
Query: 646 ctgtactggtagacaggtcaattggaggttccagtataaaggatggacaaatagagctaa 705
|| |||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||
Sbjct: 2020 ctatacttgtagacaggtctgttggaggtgccagcataaaggatggacagatagagctaa 2079
Query: 706 tgctacacaggaggctactccatgatgatgggaaaggcgtcgccgaggcgctaaatgaaa 765
||||||||||||| ||||| ||||||||||| || || || ||||| |||||||||
Sbjct: 2080 tgctacacaggagactacttcatgatgatggtcgtggtgttgcagaggcattaaatgaaa 2139
Query: 766 cagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatactatgtcaaaa 825
|| |||| | ||||| |||||||||||||| |||| |||||||| || ||| ||||||
Sbjct: 2140 caacctgttttgataatcaatgtgaaggactagttattcaaggaaagtattatctcaaaa 2199
Query: 826 tagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaatatactccc 885
| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 2200 ttgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaatatactccc 2259
Query: 886 ctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcacatgttgcaa 945
|||| ||| ||||||| |||||||||||||||| || |||| ||||||||| ||| |||
Sbjct: 2260 ctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcacacgttacaa 2319
Query: 946 aattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgcttacccttc 1005
|||||||||| |||||| | | |||||||||||||||||||||||| ||||||| ||||
Sbjct: 2320 aattctctgcaatggatccggcctacagcttgcctgataatgttgcattgcttactcttc 2379
Query: 1006 aggagcttgaagatggaagtgttctccttcggtttgctcatctatatgaggccggggagg 1065
|||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||| || |||
Sbjct: 2380 aggaacttgaagacggaactgttcttcttcggttggctcacctatacgaggctggagagc 2439
Query: 1066 acaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccggagaagaaga 1125
||||||||||||| || |||| || ||||||| |||||||| || || || |||||||
Sbjct: 2440 acaaggatctttcagctctagctagcgtcgacctgaagagagtatttccagacaagaaga 2499
Query: 1126 ttggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatggagaaga 1185
||| |||| | | ||||||||| |||| || ||||||||||| ||||||||||||| |
Sbjct: 2500 ttgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatggagaaaa 2559
Query: 1186 agcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttcggggtggcc 1245
|| | |||| ||||||| | |||| || | || || || ||| | || ||||| ||||
Sbjct: 2560 agaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtccggggaggcc 2619
Query: 1246 ctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgcacattc 1301
| || |||||||| |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 2620 ccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgcacattc 2675
>gb|CB647700.1|CB647700 OSJNEb10L19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10L19 3', mRNA sequence
Length = 846
Score = 383 bits (193), Expect = e-103
Identities = 457/545 (83%)
Strand = Plus / Minus
Query: 757 taaatgaaacagtctgtctcgataagcaatgtgaaggactcattatacaaggaaaatact 816
||||||||||| |||| | ||||| |||||||||||||| |||| |||||||| || |
Sbjct: 811 taaatgaaacaacctgttttgataatcaatgtgaaggactagttattcaaggaaagtatt 752
Query: 817 atgtcaaaatagacccacaaggagaaggagctcggtggcgtcggacatttggccaggaaa 876
|| ||||||| || |||||||| ||||||||| ||||||| |||||||||||||||||||
Sbjct: 751 atctcaaaattgatccacaaggtgaaggagctaggtggcggcggacatttggccaggaaa 692
Query: 877 tatactcccctctccttcttgctttcacagagcaggatggaggcaactgggcgaattcac 936
||||||||||||| ||| ||||||| |||||||||||||||| || |||| ||||||||
Sbjct: 691 tatactcccctcttcttattgcttttgcagagcaggatggaggtaattgggtgaattcac 632
Query: 937 atgttgcaaaattctctgcgatggattcaacttacagcttgcctgataatgttgcaatgc 996
| ||| ||||||||||||| |||||| | | |||||||||||||||||||||||| |||
Sbjct: 631 acgttacaaaattctctgcaatggatccggcctacagcttgcctgataatgttgcattgc 572
Query: 997 ttacccttcaggagcttgaagatggaagtgttctccttcggtttgctcatctatatgagg 1056
|||| |||||||| |||||||| |||| |||||| |||||||| ||||| ||||| ||||
Sbjct: 571 ttactcttcaggaacttgaagacggaactgttcttcttcggttggctcacctatacgagg 512
Query: 1057 ccggggaggacaaggatctttcgtctttagcgagtatcgacctcaagagagtgttcccgg 1116
| || ||| ||||||||||||| || |||| || ||||||| |||||||| || || |
Sbjct: 511 ctggagagcacaaggatctttcagctctagctagcgtcgacctgaagagagtatttccag 452
Query: 1117 agaagaagattggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagcca 1176
| |||||||||| |||| | | ||||||||| |||| || ||||||||||| ||||||
Sbjct: 451 acaagaagattgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagcca 392
Query: 1177 tggagaagaagcgtttgaaatggaaggcgcaaggttctgcggcggacgagaaggtggttc 1236
||||||| ||| | |||| ||||||| | |||| || | || || || ||| | || |
Sbjct: 391 tggagaaaaagaggctgaagtggaaggtggaaggccctcctgctgatgaaaagatcgtcc 332
Query: 1237 ggggtggccctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgca 1296
|||| ||||| || |||||||| |||||||||||||| ||||| || |||||||| ||||
Sbjct: 331 ggggaggccccgtagatccttccaagctcgtcgttgatctgggccccatggagatacgca 272
Query: 1297 cattc 1301
|||||
Sbjct: 271 cattc 267
>gb|C25033.1|C25033 C25033 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S4714_1A, mRNA sequence
Length = 493
Score = 339 bits (171), Expect = 3e-090
Identities = 343/398 (86%), Gaps = 2/398 (0%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 33 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 92
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 93 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 152
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 153 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 212
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 213 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 272
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 273 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 332
Query: 346 gataaattcat-ggatttatcagattaccaggcgtttacaaggagaaggactttttggaa 404
||| ||| ||| |||| |||||||| | || | |||||||| | |||||||| | |||
Sbjct: 333 gattaatccatgggatatatcagatcaaca-gagtttacaaagggaaggactatgtgggg 391
Query: 405 actgaatttatagttgggcccataccagtagatgatgg 442
||||||||||||||||| || |||||||| | ||||||
Sbjct: 392 actgaatttatagttggnccaataccagtgggtgatgg 429
>gb|CF304074.1|CF304074 ABF1--03-P23.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-P23, mRNA sequence
Length = 629
Score = 325 bits (164), Expect = 4e-086
Identities = 284/324 (87%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 267 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 326
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 327 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 386
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 387 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 446
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 447 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 506
Query: 286 tgatgggcaggtttctctcacagttctgcgtgggcccatattggatgaagtgcaccagca 345
|||||| |||||| |||| |||||||| |||||| |||||||||| |||||||| |||||
Sbjct: 507 tgatggacaggttcctctgacagttctccgtgggtccatattggacgaagtgcatcagca 566
Query: 346 gataaattcatggatttatcagat 369
||| ||| ||||||| ||||||||
Sbjct: 567 gattaatccatggatatatcagat 590
>gb|CB648976.1|CB648976 OSJNEb12K12.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12K12 5', mRNA sequence
Length = 806
Score = 254 bits (128), Expect = 1e-064
Identities = 221/252 (87%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 352 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 411
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagactat 165
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 412 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagaccca 471
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 472 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 531
Query: 226 tgatcctcaggcttctggagcatacatattccgccctaatggcacagttccaatcagtac 285
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 532 tgatcctcaggcttctggagcatacatatttcgccctaatggcacagttcctatcaagac 591
Query: 286 tgatgggcaggt 297
|||||| |||||
Sbjct: 592 tgatggacaggt 603
>gb|CB638487.1|CB638487 OSJNEa06N09.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06N09 3', mRNA sequence
Length = 643
Score = 242 bits (122), Expect = 5e-061
Identities = 329/398 (82%)
Strand = Plus / Minus
Query: 904 cagagcaggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggatt 963
|||||||||||||||| || |||| ||||||||| ||| ||||||||||||| ||||||
Sbjct: 636 cagagcaggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatc 577
Query: 964 caacttacagcttgcctgataatgttgcaatgcttacccttcaggagcttgaagatggaa 1023
| | |||||||||||||||||||||||| ||||||| |||||||| |||||||| ||||
Sbjct: 576 cggcctacagcttgcctgataatgttgcattgcttactcttcaggaacttgaagacggaa 517
Query: 1024 gtgttctccttcggtttgctcatctatatgaggccggggaggacaaggatctttcgtctt 1083
|||||| |||||||| ||||| ||||| ||||| || ||| ||||||||||||| ||
Sbjct: 516 ctgttcttcttcggttggctcacctatacgaggctggagagcacaaggatctttcagctc 457
Query: 1084 tagcgagtatcgacctcaagagagtgttcccggagaagaagattggcaaggtcatcgaga 1143
|||| || ||||||| |||||||| || || || |||||||||| |||| | | ||||
Sbjct: 456 tagctagcgtcgacctgaagagagtatttccagacaagaagattgtcaagattgttgaga 397
Query: 1144 caagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatggaagg 1203
||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||||||
Sbjct: 396 caagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtggaagg 337
Query: 1204 cgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcgaagc 1263
| |||| || | || || || ||| | || ||||| ||||| || |||||||| ||||
Sbjct: 336 tggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttccaagc 277
Query: 1264 tcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||| |||| || |||||||| |||||||||
Sbjct: 276 tcgtcgttgatttgggccccatggagatacgcacattc 239
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10,
complete sequence
Length = 158833
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 133741 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 133800
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 133801 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 133860
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 134706 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 134765
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 134766 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 134819
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 135614 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 135673
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 135674 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 135722
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 135798 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 135857
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 135858 tacagcttgcctgataatgttgcattgcttactcttcagg 135897
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 132937 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 132996
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 132997 tgatcctcagg 133007
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 132396 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 132455
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 132456 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 132512
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 133085 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 133144
Query: 294 aggt 297
||||
Sbjct: 133145 aggt 133148
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Plus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 136615 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 136674
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 136675 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 136734
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 136735 aagctcgtcgttgatctgggccccatggagatacgcacattc 136776
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 134126 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 134175
>gb|AACV01023263.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023263, whole
genome shotgun sequence
Length = 27698
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Minus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 18540 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 18481
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 18480 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 18421
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Minus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 17575 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 17516
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 17515 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 17462
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 16667 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 16608
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 16607 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 16559
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Minus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 16483 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 16424
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 16423 tacagcttgcctgataatgttgcattgcttactcttcagg 16384
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 19344 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 19285
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 19284 tgatcctcagg 19274
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 19885 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 19826
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 19825 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 19769
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 19196 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 19137
Query: 294 aggt 297
||||
Sbjct: 19136 aggt 19133
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 18155 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 18106
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Minus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 15666 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 15607
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 15606 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 15547
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 15546 aagctcgtcgttgatctgggccccatggagatacgcacattc 15505
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 1099320 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 1099379
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 1099380 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 1099439
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 1100285 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 1100344
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 1100345 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 1100398
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 1101193 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 1101252
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 1101253 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 1101301
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 1101377 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 1101436
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 1101437 tacagcttgcctgataatgttgcattgcttactcttcagg 1101476
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 1098516 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 1098575
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 1098576 tgatcctcagg 1098586
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 1097975 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 1098034
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 1098035 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 1098091
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 1098664 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 1098723
Query: 294 aggt 297
||||
Sbjct: 1098724 aggt 1098727
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Plus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 1102194 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 1102253
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 1102254 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 1102313
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 1102314 aagctcgtcgttgatctgggccccatggagatacgcacattc 1102355
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1099705 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 1099754
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 15264302 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 15264361
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 15264362 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 15264421
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 15265267 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 15265326
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 15265327 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 15265380
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 15266175 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 15266234
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 15266235 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 15266283
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 15266359 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 15266418
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 15266419 tacagcttgcctgataatgttgcattgcttactcttcagg 15266458
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 15263498 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 15263557
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 15263558 tgatcctcagg 15263568
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 15262957 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 15263016
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 15263017 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 15263073
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 15263646 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 15263705
Query: 294 aggt 297
||||
Sbjct: 15263706 aggt 15263709
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Plus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 15267176 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 15267235
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 15267236 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 15267295
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 15267296 aagctcgtcgttgatctgggccccatggagatacgcacattc 15267337
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 15264687 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 15264736
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 18398376 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 18398435
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 18398436 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 18398495
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 18399341 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 18399400
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 18399401 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 18399454
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 18400249 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 18400308
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 18400309 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 18400357
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 18400433 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 18400492
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 18400493 tacagcttgcctgataatgttgcattgcttactcttcagg 18400532
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 18397572 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 18397631
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 18397632 tgatcctcagg 18397642
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 18397031 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 18397090
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 18397091 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 18397147
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 18397720 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 18397779
Query: 294 aggt 297
||||
Sbjct: 18397780 aggt 18397783
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Plus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 18401250 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 18401309
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 18401310 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 18401369
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 18401370 aagctcgtcgttgatctgggccccatggagatacgcacattc 18401411
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 18398761 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 18398810
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 143 bits (72), Expect = 3e-031
Identities = 108/120 (90%)
Strand = Plus / Plus
Query: 417 gttgggcccataccagtagatgatggaaatggaaaagaagtagcaactgaaattgttaca 476
||||| || |||||||| ||||||||||||||||||||| || | |||||| | ||||||
Sbjct: 18557777 gttggaccaataccagtggatgatggaaatggaaaagaactatccactgaagtcgttaca 18557836
Query: 477 aacatggtgacaaacaaaacattctacactgattccagtggacgtgatttcatcaaaagg 536
||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 18557837 aacatggcaacaaacaaaacattttacactgattccagtggacgtgacttcatcaaaagg 18557896
Score = 123 bits (62), Expect = 3e-025
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 603 gttaatcttggcatctatgtggaggatggcagcaaagagctgtctgtactggtagacagg 662
|||||||||||||| |||||||| ||||| |||| |||| | ||| |||| |||||||||
Sbjct: 18558742 gttaatcttggcatttatgtggaagatggaagcagagagttatctatacttgtagacagg 18558801
Query: 663 tcaattggaggttccagtataaaggatggacaaatagagctaatgctacacagg 716
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 18558802 tctgttggaggtgccagcataaaggatggacagatagagctaatgctacacagg 18558855
Score = 121 bits (61), Expect = 1e-024
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 804 caaggaaaatactatgtcaaaatagacccacaaggagaaggagctcggtggcgtcggaca 863
|||||||| || ||| ||||||| || |||||||| ||||||||| ||||||| ||||||
Sbjct: 18559650 caaggaaagtattatctcaaaattgatccacaaggtgaaggagctaggtggcggcggaca 18559709
Query: 864 tttggccaggaaatatactcccctctccttcttgctttcacagagcagg 912
|||||||||||||||||||||||||| ||| ||||||| |||||||||
Sbjct: 18559710 tttggccaggaaatatactcccctcttcttattgcttttgcagagcagg 18559758
Score = 103 bits (52), Expect = 3e-019
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 909 caggatggaggcaactgggcgaattcacatgttgcaaaattctctgcgatggattcaact 968
||||||||||| || |||| ||||||||| ||| ||||||||||||| |||||| | |
Sbjct: 18559834 caggatggaggtaattgggtgaattcacacgttacaaaattctctgcaatggatccggcc 18559893
Query: 969 tacagcttgcctgataatgttgcaatgcttacccttcagg 1008
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 18559894 tacagcttgcctgataatgttgcattgcttactcttcagg 18559933
Score = 101 bits (51), Expect = 1e-018
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 166 ggttcaagcaaactttgagcagaaatacaagtattatattggacaggatggaaatggaag 225
|||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 18556973 ggttgaagcaaattttgagcagaagtacaagtattacataggacaggatggaaatggaag 18557032
Query: 226 tgatcctcagg 236
|||||||||||
Sbjct: 18557033 tgatcctcagg 18557043
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 18556432 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 18556491
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 18556492 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 18556548
Score = 87.7 bits (44), Expect = 2e-014
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 234 aggcttctggagcatacatattccgccctaatggcacagttccaatcagtactgatgggc 293
|||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
Sbjct: 18557121 aggcttctggagcatacatatttcgccctaatggcacagttcctatcaagactgatggac 18557180
Query: 294 aggt 297
||||
Sbjct: 18557181 aggt 18557184
Score = 83.8 bits (42), Expect = 3e-013
Identities = 132/162 (81%)
Strand = Plus / Plus
Query: 1140 gagacaagcttatcggcaaaccaagaacgcgcagccatggagaagaagcgtttgaaatgg 1199
||||||||| |||| || ||||||||||| ||||||||||||| ||| | |||| |||
Sbjct: 18560651 gagacaagcctatcagcgaaccaagaacgttcagccatggagaaaaagaggctgaagtgg 18560710
Query: 1200 aaggcgcaaggttctgcggcggacgagaaggtggttcggggtggccctgtggatccttcg 1259
|||| | |||| || | || || || ||| | || ||||| ||||| || ||||||||
Sbjct: 18560711 aaggtggaaggccctcctgctgatgaaaagatcgtccggggaggccccgtagatccttcc 18560770
Query: 1260 aagctcgtcgttgagctggggccaatggagatccgcacattc 1301
|||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 18560771 aagctcgtcgttgatctgggccccatggagatacgcacattc 18560812
Score = 83.8 bits (42), Expect = 3e-013
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 555 gagtggaagattgaagtgcaccagcctattgctggaaactattatcctgt 604
||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 18558162 gagtggaagatcgaagtgcaccagcctatcgctggaaactattatcctgt 18558211
>gb|CB638523.1|CB638523 OSJNEa06O08.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06O08 5', mRNA sequence
Length = 545
Score = 89.7 bits (45), Expect = 4e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| |||||| | ||| |||| ||||| |
Sbjct: 407 gtccactctgcactcatctcaaggaagtgaaaatagtaacatgcaaattgggcaaggaca 466
Query: 106 cttgaaacttcaatataatgaagctggaaaattatccctgtactccgatagtaagac 162
|||||||||||||| |||| ||||||| |||||| ||||||||| ||||||||||
Sbjct: 467 gttgaaacttcaatacaatgcagctggagcattatctctgtactccaatagtaagac 523
>dbj|AG214404.1| Oryza sativa (japonica cultivar-group) DNA, clone:T14295T, 3'
flanking sequence of Tos17 insertion in rice strain
NE3050, genomic survey sequence
Length = 437
Score = 87.7 bits (44), Expect = 2e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 929 gaattcacatgttgcaaaattctctgcgatggattcaacttacagcttgcctgataatgt 988
||||||||| ||| ||||||||||||| |||||| | | ||||||||||||||||||||
Sbjct: 99 gaattcacacgttacaaaattctctgcaatggatccggcctacagcttgcctgataatgt 158
Query: 989 tgcaatgcttacccttcagg 1008
|||| ||||||| |||||||
Sbjct: 159 tgcattgcttactcttcagg 178
>gb|CB638524.1|CB638524 OSJNEa06O08.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06O08 3', mRNA sequence
Length = 457
Score = 52.0 bits (26), Expect = 0.001
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 1236 cggggtggccctgtggatccttcgaagctcgtcgttgagctggggccaatggagatccgc 1295
||||| ||||| || |||| ||| |||||||||||||| |||| || |||||||| |||
Sbjct: 326 cggggaggccccgtagatctttccaagctcgtcgttgatttgggccccatggagatacgc 267
Query: 1296 acattc 1301
||||||
Sbjct: 266 acattc 261
Score = 50.1 bits (25), Expect = 0.004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 1119 aagaagattggcaaggtcatcgagacaagcttatcggcaaaccaagaacgcgcagccatg 1178
|||||||||| |||| | | ||||||||| |||| || ||||||||||| ||||||||
Sbjct: 443 aagaagattgtcaagattgttgagacaagcctatcagcgaaccaagaacgttcagccatg 384
Query: 1179 gagaa 1183
|||||
Sbjct: 383 gagaa 379
>gb|CB645682.1|CB645682 OSJNEb07I23.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07I23 5', mRNA sequence
Length = 579
Score = 48.1 bits (24), Expect = 0.015
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 46 gtccactcagtactcacctcaaggaagtgaaagtagtaatctacaagttggtcaaggcaa 105
|||||||| | ||||| ||||||||||||||| || ||| | | | |||| ||||| |
Sbjct: 482 gtccactctgcactcatctcaaggaagtgaaaatactaacatgctaattgggcaaggaca 541
Query: 106 cttgaaacttcaatataatgaagctgga 133
|||||||||||||| |||| |||||||
Sbjct: 542 gttgaaacttcaatacaatgcagctgga 569
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,658,269
Number of Sequences: 438736
Number of extensions: 2658269
Number of successful extensions: 18043
Number of sequences better than 0.5: 20
Number of HSP's better than 0.5 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17806
Number of HSP's gapped (non-prelim): 230
length of query: 1626
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1604
effective length of database: 2,790,767,724
effective search space: 4476391429296
effective search space used: 4476391429296
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)