BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF18e02.yg.3.1
(315 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB670593.1|CB670593 OSJNEe03L24.f OSJNEe Oryza sativa (j... 52 2e-004
gb|CF307419.1|CF307419 HDA1--06-K09.g1 OsHDAC1-overexpressi... 52 2e-004
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 52 2e-004
gb|AACV01022097.1| Oryza sativa (japonica cultivar-group) c... 52 2e-004
ref|NM_197706.1| Oryza sativa (japonica cultivar-group) put... 52 2e-004
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 52 2e-004
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 52 2e-004
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 52 2e-004
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 52 2e-004
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 52 2e-004
gb|AQ289498.1|AQ289498 nbxb0035E10f CUGI Rice BAC Library O... 42 0.17
gb|AQ395992.2|AQ395992 nbxb0067E12f CUGI Rice BAC Library O... 40 0.68
gb|AC099732.2| Oryza sativa (japonica cultivar-group) chrom... 40 0.68
gb|AACV01006150.1| Oryza sativa (japonica cultivar-group) c... 40 0.68
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 40 0.68
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 40 0.68
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 40 0.68
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 40 0.68
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 40 0.68
dbj|AP004274.5| Oryza sativa (japonica cultivar-group) geno... 38 2.7
gb|AACV01016979.1| Oryza sativa (japonica cultivar-group) c... 38 2.7
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 38 2.7
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 38 2.7
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 38 2.7
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 38 2.7
>gb|CB670593.1|CB670593 OSJNEe03L24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03L24 5', mRNA sequence
Length = 849
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 525 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 584
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 585 agatttcatacttctcaattgattcatattcaaagcttgtgg 626
>gb|CF307419.1|CF307419 HDA1--06-K09.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-K09, mRNA sequence
Length = 630
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 28 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 87
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 88 agatttcatacttctcaattgattcatattcaaagcttgtgg 129
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
sequence
Length = 147117
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 44219 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 44160
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 44159 agatttcatacttctcaattgattcatattcaaagcttgtgg 44118
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 43452 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 43393
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 43392 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 43333
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 43332 accttcaccatgatagtgctaattttcaggt 43302
>gb|AACV01022097.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022097, whole
genome shotgun sequence
Length = 33930
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 6744 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 6685
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 6684 agatttcatacttctcaattgattcatattcaaagcttgtgg 6643
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 5977 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 5918
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 5917 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 5858
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 5857 accttcaccatgatagtgctaattttcaggt 5827
>ref|NM_197706.1| Oryza sativa (japonica cultivar-group) putative transcription
regulatory protein (OSJNBa0010C11.3), mRNA
Length = 7478
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 5657 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 5716
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 5717 agatttcatacttctcaattgattcatattcaaagcttgtgg 5758
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 3291400 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 3291341
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 3291340 agatttcatacttctcaattgattcatattcaaagcttgtgg 3291299
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 3290633 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 3290574
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 3290573 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 3290514
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 3290513 accttcaccatgatagtgctaattttcaggt 3290483
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 9343805 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 9343746
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 9343745 agatttcatacttctcaattgattcatattcaaagcttgtgg 9343704
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 9343038 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 9342979
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 9342978 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 9342919
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 9342918 accttcaccatgatagtgctaattttcaggt 9342888
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 20209599 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 20209540
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 20209539 agatttcatacttctcaattgattcatattcaaagcttgtgg 20209498
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 20208832 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 20208773
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 20208772 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 20208713
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 20208712 accttcaccatgatagtgctaattttcaggt 20208682
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 21369206 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 21369147
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 21369146 agatttcatacttctcaattgattcatattcaaagcttgtgg 21369105
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 21368439 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 21368380
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 21368379 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 21368320
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 21368319 accttcaccatgatagtgctaattttcaggt 21368289
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 21380469 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 21380410
Query: 61 atatttcatatttttccattgattcatatgcaaagctcgtgg 102
| |||||||| || || |||||||||||| ||||||| ||||
Sbjct: 21380409 agatttcatacttctcaattgattcatattcaaagcttgtgg 21380368
Score = 40.1 bits (20), Expect = 0.68
Identities = 118/151 (78%)
Strand = Plus / Minus
Query: 163 agattatttctgttactgtgaggaccattcagaaagatgctgaggaaaagaaagcttcat 222
||||| ||||||||| || |||| ||||| | ||||||||| |||||||||| ||| |
Sbjct: 21379702 agattctttctgttatagttaggattattcaaagagatgctgaagaaaagaaagtttctt 21379643
Query: 223 ttaatccccgaccatacttccgattgtntataaattggctctatgaccttactactactg 282
| ||||| || || || || || |||| ||||||| ||| ||| ||||||||| |||
Sbjct: 21379642 tcaatcctcggccgtattttcggttgttcataaatttgcttagtgagcttactacttctg 21379583
Query: 283 atggccatcatgatggttctaattttcaggt 313
| || |||||| || |||||||||||||
Sbjct: 21379582 accttcaccatgatagtgctaattttcaggt 21379552
>gb|AQ289498.1|AQ289498 nbxb0035E10f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0035E10f, DNA
sequence
Length = 523
Score = 42.1 bits (21), Expect = 0.17
Identities = 72/89 (80%)
Strand = Plus / Minus
Query: 1 tagtctccgagcaaattgttgctcctggtggatcatctcagcaatcaccacagcaacccc 60
||||||| |||||| | ||||||||||| || |||||||| || | ||||||| ||
Sbjct: 91 tagtctctgagcaagtagttgctcctggcgggatttctcagcagccaacgcagcaactcc 32
Query: 61 atatttcatatttttccattgattcatat 89
| |||||||| || || ||||||||||||
Sbjct: 31 agatttcatacttctcaattgattcatat 3
>gb|AQ395992.2|AQ395992 nbxb0067E12f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0067E12f, DNA sequence
Length = 416
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 359 cattgattcatatgcaaagc 340
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03,
complete sequence
Length = 82352
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 21489 cattgattcatatgcaaagc 21470
>gb|AACV01006150.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006150, whole
genome shotgun sequence
Length = 100045
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 2288 cattgattcatatgcaaagc 2307
>ref|NT_107190.1| Oryza sativa (japonica cultivar-group)
Length = 840383
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 60864 cattgattcatatgcaaagc 60883
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 6817388 cattgattcatatgcaaagc 6817407
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 7009750 cattgattcatatgcaaagc 7009769
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 6802469 cattgattcatatgcaaagc 6802488
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.1 bits (20), Expect = 0.68
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 cattgattcatatgcaaagc 96
||||||||||||||||||||
Sbjct: 6803256 cattgattcatatgcaaagc 6803275
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0450A04
Length = 162545
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 84992 ttccattgattcatatgca 85010
>gb|AACV01016979.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016979, whole
genome shotgun sequence
Length = 13210
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 3358 ttccattgattcatatgca 3340
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 15714701 ttccattgattcatatgca 15714719
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 13646453 ttccattgattcatatgca 13646471
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 27045892 ttccattgattcatatgca 27045910
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 38.2 bits (19), Expect = 2.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 74 ttccattgattcatatgca 92
|||||||||||||||||||
Sbjct: 28101696 ttccattgattcatatgca 28101714
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 543,263
Number of Sequences: 438736
Number of extensions: 543263
Number of successful extensions: 12877
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12620
Number of HSP's gapped (non-prelim): 246
length of query: 315
length of database: 2,800,419,916
effective HSP length: 20
effective length of query: 295
effective length of database: 2,791,645,196
effective search space: 823535332820
effective search space used: 823535332820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)