BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE8g03.yg.2.1
(360 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-grou... 133 7e-029
dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate... 133 7e-029
gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) c... 133 7e-029
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 133 7e-029
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 133 7e-029
dbj|AP003437.3| Oryza sativa (japonica cultivar-group) geno... 133 7e-029
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 133 7e-029
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 133 7e-029
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 133 7e-029
gb|AU094286.1|AU094286 AU094286 Rice panicle at flowering s... 131 3e-028
dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA... 131 3e-028
ref|XM_463619.1| Oryza sativa (japonica cultivar-group), p... 131 3e-028
gb|C73370.1|C73370 C73370 Rice panicle at flowering stage O... 123 7e-026
dbj|AG208863.1| Oryza sativa (japonica cultivar-group) DNA,... 109 1e-021
>gb|AC091090.1|AC091090 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0678F11, ***
SEQUENCING IN PROGRESS ***, 3 ordered pieces
Length = 155574
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 117361 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 117302
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 117301 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 117242
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 117241 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 117195
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 117107 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 117048
Query: 355 tgcagt 360
||||||
Sbjct: 117047 tgcagt 117042
>dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate synthase, complete cds
Length = 9181
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 8207 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 8148
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 8147 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 8088
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 8087 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 8041
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 7953 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 7894
Query: 355 tgcagt 360
||||||
Sbjct: 7893 tgcagt 7888
>gb|AACV01002933.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002933, whole
genome shotgun sequence
Length = 31042
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 12613 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 12554
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 12553 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 12494
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 12493 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 12447
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 12359 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 12300
Query: 355 tgcagt 360
||||||
Sbjct: 12299 tgcagt 12294
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 40175800 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 40175859
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 40175860 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 40175919
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 40175920 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 40175966
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 40176054 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 40176113
Query: 355 tgcagt 360
||||||
Sbjct: 40176114 tgcagt 40176119
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 14623183 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 14623242
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 14623243 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 14623302
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 14623303 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 14623349
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 14623437 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 14623496
Query: 355 tgcagt 360
||||||
Sbjct: 14623497 tgcagt 14623502
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0678F11
Length = 154292
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 38214 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 38273
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 38274 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 38333
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 38334 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 38380
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 38468 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 38527
Query: 355 tgcagt 360
||||||
Sbjct: 38528 tgcagt 38533
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 14383421 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 14383480
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 14383481 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 14383540
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 14383541 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 14383587
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 14383675 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 14383734
Query: 355 tgcagt 360
||||||
Sbjct: 14383735 tgcagt 14383740
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 39585142 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 39585201
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 39585202 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 39585261
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 39585262 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 39585308
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 39585396 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 39585455
Query: 355 tgcagt 360
||||||
Sbjct: 39585456 tgcagt 39585461
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 133 bits (67), Expect = 7e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 40095130 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 40095189
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 40095190 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 40095249
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
|||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 40095250 tacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 40095296
Score = 67.9 bits (34), Expect = 3e-009
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 295 acctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttcc 354
|||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | ||||
Sbjct: 40095384 acctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattcc 40095443
Query: 355 tgcagt 360
||||||
Sbjct: 40095444 tgcagt 40095449
>gb|AU094286.1|AU094286 AU094286 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3926, mRNA sequence
Length = 614
Score = 131 bits (66), Expect = 3e-028
Identities = 141/166 (84%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 199 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 140
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 139 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 80
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctga 216
|||||||| |||||| | ||||||||||| || |||||||||||||
Sbjct: 79 tacatgtttcccacagacaggccccagcgtacgaaaagatacctga 34
Score = 48.1 bits (24), Expect = 0.003
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 294 tacctgagtgcctgtgaccttgatgctagcagagggacaa 333
||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 40 tacctgagtgcttgtgacctcgatgctagaagaggaacaa 1
>dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120M11, full
insert sequence
Length = 3825
Score = 131 bits (66), Expect = 3e-028
Identities = 141/166 (84%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 3360 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 3301
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 3300 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 3241
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctga 216
|||||||| |||||| | ||||||||||| || |||||||||||||
Sbjct: 3240 tacatgtttcccacagacaggccccagcgtacgaaaagatacctga 3195
Score = 69.9 bits (35), Expect = 9e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 294 tacctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttc 353
||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | |||
Sbjct: 3201 tacctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattc 3142
Query: 354 ctgcagt 360
|||||||
Sbjct: 3141 ctgcagt 3135
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 3303
Score = 131 bits (66), Expect = 3e-028
Identities = 141/166 (84%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 3176 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 3117
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||
Sbjct: 3116 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccgacgatcaga 3057
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctga 216
|||||||| |||||| | ||||||||||| || |||||||||||||
Sbjct: 3056 tacatgtttcccacagacaggccccagcgtacgaaaagatacctga 3011
Score = 69.9 bits (35), Expect = 9e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 294 tacctgagtgcctgtgaccttgatgctagcagagggacaacctgaagccttgtcgagttc 353
||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| | |||
Sbjct: 3017 tacctgagtgcttgtgacctcgatgctagaagaggaacaacttgaagccttgttgcattc 2958
Query: 354 ctgcagt 360
|||||||
Sbjct: 2957 ctgcagt 2951
>gb|C73370.1|C73370 C73370 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3926_1A, mRNA sequence
Length = 459
Score = 123 bits (62), Expect = 7e-026
Identities = 139/166 (83%)
Strand = Plus / Minus
Query: 51 cctgggctcctcagcagcccttccgaacctttctcggtgacaccccggacaatcacagtc 110
|||| |||||||| |||| ||||| || ||||||||||| || |||| ||||| |||
Sbjct: 200 cctgagctcctcaccagctgctccgagcccttctcggtgacgccgcggatgatcaccgtc 141
Query: 111 ttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatcaga 170
||||||||||| || ||||||||||| |||||||||||||| || ||||| ||| |||
Sbjct: 140 ttgtgtaaccctgacagcatctcctcgtgatcggtgtcgccgtgctccccnacgatnaga 81
Query: 171 tacatgttccccacatataggccccagcgcacaaaaagatacctga 216
|||||||| |||||| | ||||||||||| || ||||||||||||
Sbjct: 80 tacatgtttcccacanacaggccccagcgtacgnaaagatacctga 35
Score = 52.0 bits (26), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 294 tacctgagtgcctgtgaccttgatgctagcagagggacaac 334
||||||||||| |||||||| |||||||| ||||| |||||
Sbjct: 41 tacctgagtgcttgtgacctcgatgctagaagaggnacaac 1
>dbj|AG208863.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE4049_0_706_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE4049, genomic survey sequence
Length = 213
Score = 109 bits (55), Expect = 1e-021
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 108 gtcttgtgtaacccagatagcatctcctcatgatcggtgtcgccatgttccccagtgatc 167
|||||||||||||| || ||||||||||| |||||||||| ||| || ||||| ||||
Sbjct: 211 gtcttgtgtaaccctgacagcatctcctcgtgatcggtgtngccgtgctccccgacgatc 152
Query: 168 agatacatgttccccacatataggccccagcgcacaaaaagatacctgaa 217
||||||||||| |||||| | ||||||||||| || ||||||||||||||
Sbjct: 151 agatacatgtttcccacagacaggccccagcgtacgaaaagatacctgaa 102
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 343,185
Number of Sequences: 438736
Number of extensions: 343185
Number of successful extensions: 7140
Number of sequences better than 0.5: 14
Number of HSP's better than 0.5 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7065
Number of HSP's gapped (non-prelim): 75
length of query: 360
length of database: 2,800,419,916
effective HSP length: 20
effective length of query: 340
effective length of database: 2,791,645,196
effective search space: 949159366640
effective search space used: 949159366640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)