BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8636641.2.1
(1326 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB647818.1|CB647818 OSJNEb10O18.r OSJNEb Oryza sativa (j... 200 1e-048
gb|CB650455.1|CB650455 OSJNEb14O11.r OSJNEb Oryza sativa (j... 200 1e-048
dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA... 200 1e-048
dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA... 200 1e-048
gb|AC124144.2| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|AC137614.2| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|AACV01010937.1| Oryza sativa (japonica cultivar-group) c... 200 1e-048
tpe|BN000601.1| TPA: Oryza sativa (japonica cultivar-group)... 200 1e-048
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 200 1e-048
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 200 1e-048
gb|C96957.1|C96957 C96957 Rice callus Oryza sativa (japonic... 180 1e-042
gb|CA753810.1|CA753810 BR040002000_PLATE_H07_56_063.ab1 OA ... 155 7e-035
gb|CB650454.1|CB650454 OSJNEb14O11.f OSJNEb Oryza sativa (j... 155 7e-035
gb|CB653561.1|CB653561 OSJNEc04L07.f OSJNEc Oryza sativa (j... 155 7e-035
gb|AU181231.1|AU181231 AU181231 Rice callus (2001) Oryza sa... 147 2e-032
gb|C96956.1|C96956 C96956 Rice callus Oryza sativa (japonic... 135 7e-029
gb|AZ134701.1|AZ134701 OSJNBb0113K16f CUGI Rice BAC Library... 107 2e-020
gb|CV723003.1|CV723003 root--02-D14.g1 Rice root lambda pha... 101 1e-018
gb|AU082060.1|AU082060 AU082060 Rice panicle at flowering s... 98 1e-017
gb|AU184426.1|AU184426 AU184426 Rice root Oryza sativa (jap... 98 1e-017
gb|CB652588.1|CB652588 OSJNEc02M04.f OSJNEc Oryza sativa (j... 98 1e-017
gb|CB656472.1|CB656472 OSJNEc10N13.f OSJNEc Oryza sativa (j... 98 1e-017
dbj|AK068063.1| Oryza sativa (japonica cultivar-group) cDNA... 98 1e-017
dbj|AK099241.1| Oryza sativa (japonica cultivar-group) cDNA... 98 1e-017
ref|NM_183819.1| Oryza sativa (japonica cultivar-group), p... 98 1e-017
gb|CF335607.1|CF335607 JMT--05-F13.g1 AtJMT-overexpressing ... 82 9e-013
dbj|AP004358.5| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
dbj|AP002971.2| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
gb|AACV01000923.1| Oryza sativa (japonica cultivar-group) c... 82 9e-013
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 82 9e-013
tpe|BN000545.1| TPA: Oryza sativa (japonica cultivar-group)... 82 9e-013
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 82 9e-013
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 82 9e-013
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
gb|AU082061.1|AU082061 AU082061 Rice panicle at flowering s... 78 1e-011
gb|AU184453.1|AU184453 AU184453 Rice root Oryza sativa (jap... 78 1e-011
gb|AU184536.1|AU184536 AU184536 Rice root Oryza sativa (jap... 78 1e-011
gb|CA756079.1|CA756079 BR030034000_PLATE_E08_61_066.ab1 OA ... 78 1e-011
gb|CB653413.1|CB653413 OSJNEc04G18.r OSJNEc Oryza sativa (j... 78 1e-011
gb|CB659835.1|CB659835 OSJNEd01B22.r OSJNEd Oryza sativa (j... 78 1e-011
gb|CO435937.1|CO435937 OsMR571 5MT resistant rice mutant cD... 78 1e-011
dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA... 78 1e-011
dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA... 78 1e-011
gb|AC105363.2| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|AACV01005779.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
ref|NM_187575.1| Oryza sativa (japonica cultivar-group), p... 78 1e-011
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 78 1e-011
tpe|BN000564.1| TPA: Oryza sativa (japonica cultivar-group)... 78 1e-011
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 78 1e-011
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|CV721660.1|CV721660 YBH--04-O05.b1 Rice before heading y... 76 5e-011
emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC O... 76 5e-011
dbj|AK069456.1| Oryza sativa (japonica cultivar-group) cDNA... 76 5e-011
emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC O... 76 5e-011
ref|NT_107112.1| Oryza sativa (japonica cultivar-group) 76 5e-011
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 76 5e-011
gb|AACV01022237.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
gb|AACV01023854.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
tpe|BN000535.1| TPA: Oryza sativa (japonica cultivar-group)... 76 5e-011
tpe|BN000659.1| TPA: Oryza sativa (japonica cultivar-group)... 76 5e-011
tpe|BN000664.1| TPA: Oryza sativa (japonica cultivar-group)... 76 5e-011
ref|NM_183630.1| Oryza sativa (japonica cultivar-group), p... 76 5e-011
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 76 5e-011
dbj|AP002482.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
dbj|AP002820.2| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|AU222646.1|AU222646 AU222646 Rice cDNA from immature lea... 74 2e-010
dbj|AP005706.1| Oryza sativa (japonica cultivar-group) chro... 74 2e-010
dbj|AK071392.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
tpe|BN000652.1| TPA: Oryza sativa (japonica cultivar-group)... 74 2e-010
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 74 2e-010
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
ref|NM_183812.1| Oryza sativa (japonica cultivar-group), p... 70 3e-009
dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group... 70 3e-009
gb|AU082714.1|AU082714 AU082714 Rice root Oryza sativa (jap... 68 1e-008
dbj|AK064633.1| Oryza sativa (japonica cultivar-group) cDNA... 66 5e-008
gb|AACV01005774.1| Oryza sativa (japonica cultivar-group) c... 66 5e-008
ref|NM_187573.1| Oryza sativa (japonica cultivar-group), p... 66 5e-008
tpe|BN000563.1| TPA: Oryza sativa (japonica cultivar-group)... 66 5e-008
gb|AU098340.1|AU098340 AU098340 Rice root Oryza sativa (jap... 64 2e-007
dbj|AK060028.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK073847.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK103660.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
ref|NM_187572.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
tpe|BN000562.1| TPA: Oryza sativa (japonica cultivar-group)... 64 2e-007
gb|AU032334.1|AU032334 AU032334 Rice root Oryza sativa (jap... 62 8e-007
gb|CA754901.1|CA754901 BR030008000_PLATE_C05_35_036.ab1 OA ... 62 8e-007
dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA... 62 8e-007
dbj|AK105708.1| Oryza sativa (japonica cultivar-group) cDNA... 62 8e-007
dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA... 62 8e-007
dbj|AP005529.3| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
gb|AACV01016877.1| Oryza sativa (japonica cultivar-group) c... 62 8e-007
gb|AACV01018908.1| Oryza sativa (japonica cultivar-group) c... 62 8e-007
ref|NM_197545.1| Oryza sativa (japonica cultivar-group) put... 62 8e-007
ref|XM_479274.1| Oryza sativa (japonica cultivar-group), mRNA 62 8e-007
ref|XM_483499.1| Oryza sativa (japonica cultivar-group), mRNA 62 8e-007
tpe|BN000634.1| TPA: Oryza sativa (japonica cultivar-group)... 62 8e-007
tpe|BN000648.1| TPA: Oryza sativa (japonica cultivar-group)... 62 8e-007
dbj|AP005292.5| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 62 8e-007
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 62 8e-007
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
gb|D41929.1|D41929 RICS4949A Rice shoot Oryza sativa (japon... 60 3e-006
gb|CA755599.1|CA755599 BR030024000_PLATE_C11_83_085.ab1 OA ... 60 3e-006
gb|CA756454.1|CA756454 BR030042000_PLATE_H07_56_063.ab1 OA ... 60 3e-006
gb|CB648956.1|CB648956 OSJNEb12J23.f OSJNEb Oryza sativa (j... 60 3e-006
gb|CB663442.1|CB663442 OSJNEd08G17.f OSJNEd Oryza sativa (j... 60 3e-006
gb|CD671013.1|CD671013 OsMR434 5MT resistant rice mutant cD... 60 3e-006
gb|CV724029.1|CV724029 root--05-J08.g1 Rice root lambda pha... 60 3e-006
dbj|AP003910.1| Oryza sativa (japonica cultivar-group) chro... 60 3e-006
dbj|AK067102.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK069503.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK109911.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK120013.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AP004566.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|AACV01000919.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01016879.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01017126.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_479275.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|XM_479755.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
tpe|BN000542.1| TPA: Oryza sativa (japonica cultivar-group)... 60 3e-006
tpe|BN000635.1| TPA: Oryza sativa (japonica cultivar-group)... 60 3e-006
tpe|BN000646.1| TPA: Oryza sativa (japonica cultivar-group)... 60 3e-006
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12... 58 1e-005
gb|AACV01006711.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NM_183633.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NM_184589.1| Oryza sativa (japonica cultivar-group), mRNA 58 1e-005
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 58 1e-005
tpe|BN000577.1| TPA: Oryza sativa (japonica cultivar-group)... 58 1e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AU031807.1|AU031807 AU031807 Rice root Oryza sativa (jap... 56 5e-005
gb|C22712.1|C22712 C22712 Rice etiolated shoot Oryza sativa... 56 5e-005
gb|AU082066.1|AU082066 AU082066 Rice root Oryza sativa (jap... 56 5e-005
gb|AU166937.1|AU166937 AU166937 Rice callus (2001) Oryza sa... 56 5e-005
dbj|AK072945.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
dbj|AK108713.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
dbj|AP005409.4| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
dbj|AP005454.4| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 56 5e-005
dbj|AP003528.2| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
dbj|AP004994.2| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
dbj|AP004995.3| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|AACV01000795.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
gb|AACV01013383.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
gb|AACV01013953.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
gb|AACV01015217.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
ref|XM_476368.1| Oryza sativa (japonica cultivar-group), mRNA 56 5e-005
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 56 5e-005
tpe|BN000537.1| TPA: Oryza sativa (japonica cultivar-group)... 56 5e-005
tpe|BN000605.1| TPA: Oryza sativa (japonica cultivar-group)... 56 5e-005
tpe|BN000608.1| TPA: Oryza sativa (japonica cultivar-group)... 56 5e-005
tpe|BN000628.1| TPA: Oryza sativa (japonica cultivar-group)... 56 5e-005
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 56 5e-005
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|AC114828.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|AC144700.2| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|AACV01023534.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CA755883.1|CA755883 BR030030000_PLATE_D10_76_089.ab1 OA ... 52 8e-004
dbj|AK061040.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK068353.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
dbj|AK104936.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC O... 52 8e-004
gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbar... 52 8e-004
ref|NT_107158.1| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|AACV01006158.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01024137.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|XM_478527.1| Oryza sativa (japonica cultivar-group), mRNA 52 8e-004
ref|NT_107190.1| Oryza sativa (japonica cultivar-group) 52 8e-004
tpe|BN000568.1| TPA: Oryza sativa (japonica cultivar-group)... 52 8e-004
tpe|BN000666.1| TPA: Oryza sativa (japonica cultivar-group)... 52 8e-004
gb|AQ288487.1|AQ288487 nbxb0033O13r CUGI Rice BAC Library O... 50 0.003
gb|AQ290659.1|AQ290659 nbxb0037O16f CUGI Rice BAC Library O... 50 0.003
gb|C72226.1|C72226 C72226 Rice panicle at flowering stage O... 50 0.003
gb|C97179.1|C97179 C97179 Rice callus Oryza sativa (japonic... 50 0.003
gb|AU064009.1|AU064009 AU064009 Rice panicle at flowering s... 50 0.003
gb|AU081016.1|AU081016 AU081016 Rice root Oryza sativa (jap... 50 0.003
gb|CB641531.1|CB641531 OSJNEb01D14.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB646563.1|CB646563 OSJNEb09B22.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB647228.1|CB647228 OSJNEb10B05.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB648489.1|CB648489 OSJNEb11O08.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB648490.1|CB648490 OSJNEb11O08.r OSJNEb Oryza sativa (j... 50 0.003
gb|CB648802.1|CB648802 OSJNEb12G01.r OSJNEb Oryza sativa (j... 50 0.003
gb|CB648966.1|CB648966 OSJNEb12K06.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB650076.1|CB650076 OSJNEb14F11.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB650437.1|CB650437 OSJNEb14O02.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB650478.1|CB650478 OSJNEb14P01.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB650740.1|CB650740 OSJNEb15F18.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB651475.1|CB651475 OSJNEb16H05.f OSJNEb Oryza sativa (j... 50 0.003
gb|CB652679.1|CB652679 OSJNEc02P02.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB652785.1|CB652785 OSJNEc03C17.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB652904.1|CB652904 OSJNEc03G11.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB653203.1|CB653203 OSJNEc04A08.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB653917.1|CB653917 OSJNEc05G03.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB655836.1|CB655836 OSJNEc09J18.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB657969.1|CB657969 OSJNEc13K18.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB658611.1|CB658611 OSJNEc14M07.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB658672.1|CB658672 OSJNEc14O04.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB659227.1|CB659227 OSJNEc16A13.f OSJNEc Oryza sativa (j... 50 0.003
gb|CB662084.1|CB662084 OSJNEd05M05.f OSJNEd Oryza sativa (j... 50 0.003
gb|CB665026.1|CB665026 OSJNEd11B21.f OSJNEd Oryza sativa (j... 50 0.003
gb|CB666067.1|CB666067 OSJNEd12M19.r OSJNEd Oryza sativa (j... 50 0.003
gb|CB670484.1|CB670484 OSJNEe03J07.f OSJNEe Oryza sativa (j... 50 0.003
gb|CB671560.1|CB671560 OSJNEe05D07.f OSJNEe Oryza sativa (j... 50 0.003
gb|CB674010.1|CB674010 OSJNEe08N12.f OSJNEe Oryza sativa (j... 50 0.003
gb|CB674159.1|CB674159 OSJNEe09B07.f OSJNEe Oryza sativa (j... 50 0.003
gb|CB677162.1|CB677162 OSJNEe13N05.f OSJNEe Oryza sativa (j... 50 0.003
gb|CB678286.1|CB678286 OSJNEe16A02.f OSJNEe Oryza sativa (j... 50 0.003
gb|BP185077.1|BP185077 BP185077 pNS rice callus cDNA Oryza ... 50 0.003
dbj|AP003953.1| Oryza sativa (japonica cultivar-group) chro... 50 0.003
dbj|D10253.1|RICPORP24 Oryza sativa (japonica cultivar-grou... 50 0.003
dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK061308.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK070917.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK071111.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK071908.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK073767.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK103641.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK104633.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK106002.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK108385.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK109054.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK110555.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica ... 50 0.003
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 50 0.003
gb|AC103891.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D2... 50 0.003
gb|AC144427.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC123521.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC123522.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP004674.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NT_107143.1| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|AC087552.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AACV01000921.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01000922.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01003710.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01003711.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01006155.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01006707.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01010834.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01014808.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01015211.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01016441.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01020637.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01022000.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01022579.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_183815.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NM_183816.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NM_194553.1| Oryza sativa (japonica cultivar-group) put... 50 0.003
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 50 0.003
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 50 0.003
ref|XM_470636.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|XM_476671.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|XM_478530.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|XM_478531.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|XM_479283.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
tpe|BN000536.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000543.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000544.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000557.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000559.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000566.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000571.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000572.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000597.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000618.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000629.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000630.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000633.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000637.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000654.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000657.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000661.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
tpe|BN000662.1| TPA: Oryza sativa (japonica cultivar-group)... 50 0.003
dbj|AP004797.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NM_183631.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|D47678.1|D47678 RICS13316A Rice green shoot Oryza sativa... 48 0.012
gb|C91859.1|C91859 C91859 Rice panicle shorter than 3cm Ory... 48 0.012
gb|AU029895.1|AU029895 AU029895 Rice cDNA from immature lea... 48 0.012
gb|C20520.1|C20520 C20520 Rice etiolated shoot Oryza sativa... 48 0.012
gb|CA756338.1|CA756338 BR030040000_PLATE_E06_45_049.ab1 OA ... 48 0.012
gb|CB652281.1|CB652281 OSJNEc02A03.f OSJNEc Oryza sativa (j... 48 0.012
gb|CB657558.1|CB657558 OSJNEc13A04.f OSJNEc Oryza sativa (j... 48 0.012
gb|CB675745.1|CB675745 OSJNEe11K15.f OSJNEe Oryza sativa (j... 48 0.012
gb|CB675746.1|CB675746 OSJNEe11K15.r OSJNEe Oryza sativa (j... 48 0.012
gb|CB675790.1|CB675790 OSJNEe11L15.r OSJNEe Oryza sativa (j... 48 0.012
gb|CO435877.1|CO435877 OsMR511 5MT resistant rice mutant cD... 48 0.012
gb|BP185071.1|BP185071 BP185071 pNS rice panicle cDNA, germ... 48 0.012
dbj|AK060365.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK101508.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK103467.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK105363.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK106760.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK119205.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK122031.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK109381.2| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
gb|AACV01000648.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01002064.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01006837.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01008390.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01010831.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01010835.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
ref|NM_183635.1| Oryza sativa (japonica cultivar-group), p... 48 0.012
ref|NM_184610.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.012
ref|NM_193315.1| Oryza sativa (japonica cultivar-group), p... 48 0.012
ref|XM_470978.1| Oryza sativa (japonica cultivar-group), p... 48 0.012
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 48 0.012
tpe|BN000533.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
tpe|BN000538.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
tpe|BN000581.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
tpe|BN000594.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
tpe|BN000596.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
tpe|BN000598.1| TPA: Oryza sativa (japonica cultivar-group)... 48 0.012
ref|NM_188048.1| Oryza sativa (japonica cultivar-group), Oz... 48 0.012
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 48 0.012
dbj|AP001073.1| Oryza sativa (japonica cultivar-group) geno... 48 0.012
dbj|AP001081.1| Oryza sativa (japonica cultivar-group) geno... 48 0.012
gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 ... 48 0.012
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromoso... 48 0.012
emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromoso... 48 0.012
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 48 0.012
gb|AZ132391.1|AZ132391 OSJNBb0062L16r CUGI Rice BAC Library... 46 0.049
gb|C20528.1|C20528 C20528 Rice green shoot Oryza sativa (ja... 46 0.049
gb|AU063563.2|AU063563 AU063563 Rice callus Oryza sativa (j... 46 0.049
gb|AU098341.1|AU098341 AU098341 Rice root Oryza sativa (jap... 46 0.049
gb|AU184428.1|AU184428 AU184428 Rice root Oryza sativa (jap... 46 0.049
gb|CB641903.1|CB641903 OSJNEb01M19.f OSJNEb Oryza sativa (j... 46 0.049
gb|CB645214.1|CB645214 OSJNEb06M08.f OSJNEb Oryza sativa (j... 46 0.049
gb|CB648801.1|CB648801 OSJNEb12G01.f OSJNEb Oryza sativa (j... 46 0.049
gb|CB652203.1|CB652203 OSJNEc01N13.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB652396.1|CB652396 OSJNEc02E02.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB652478.1|CB652478 OSJNEc02H24.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB652479.1|CB652479 OSJNEc02H24.r OSJNEc Oryza sativa (j... 46 0.049
gb|CB654272.1|CB654272 OSJNEc06F02.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB655704.1|CB655704 OSJNEc09F20.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB655880.1|CB655880 OSJNEc09K20.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB656604.1|CB656604 OSJNEc11C14.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB656627.1|CB656627 OSJNEc11D08.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB656628.1|CB656628 OSJNEc11D08.r OSJNEc Oryza sativa (j... 46 0.049
gb|CB657168.1|CB657168 OSJNEc12E21.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB659355.1|CB659355 OSJNEc16E03.f OSJNEc Oryza sativa (j... 46 0.049
gb|CB659356.1|CB659356 OSJNEc16E03.r OSJNEc Oryza sativa (j... 46 0.049
gb|CB663988.1|CB663988 OSJNEd09H11.f OSJNEd Oryza sativa (j... 46 0.049
gb|CB664180.1|CB664180 OSJNEd09M04.f OSJNEd Oryza sativa (j... 46 0.049
gb|CB665118.1|CB665118 OSJNEd11E12.f OSJNEd Oryza sativa (j... 46 0.049
gb|CB666066.1|CB666066 OSJNEd12M19.f OSJNEd Oryza sativa (j... 46 0.049
gb|CB667156.1|CB667156 OSJNEd14F20.f OSJNEd Oryza sativa (j... 46 0.049
gb|CB673042.1|CB673042 OSJNEe07G04.f OSJNEe Oryza sativa (j... 46 0.049
gb|CB674249.1|CB674249 OSJNEe09D09.f OSJNEe Oryza sativa (j... 46 0.049
gb|CF326117.1|CF326117 JMT1--05-C10.g1 AtJMT-overexpressing... 46 0.049
gb|CV722619.1|CV722619 root--01-A24.g1 Rice root lambda pha... 46 0.049
dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK063299.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK064918.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK067000.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK101772.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104645.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK104754.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK105544.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.049
emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC O... 46 0.049
emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC O... 46 0.049
gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L2... 46 0.049
gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbar... 46 0.049
gb|AC125783.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.049
dbj|AP004126.4| Oryza sativa (japonica cultivar-group) geno... 46 0.049
dbj|AP003817.3| Oryza sativa (japonica cultivar-group) geno... 46 0.049
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 46 0.049
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 46 0.049
gb|AC113332.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.049
dbj|AP003577.3| Oryza sativa (japonica cultivar-group) geno... 46 0.049
gb|AACV01003404.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01006568.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01006708.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01012494.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01014035.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01016440.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01017015.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01022130.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01023718.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01025104.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
ref|NM_183637.1| Oryza sativa (japonica cultivar-group), p... 46 0.049
ref|NM_197799.1| Oryza sativa (japonica cultivar-group) put... 46 0.049
ref|XM_464193.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.049
ref|XM_479511.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.049
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 46 0.049
tpe|BN000539.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000553.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000558.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000570.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000574.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000603.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000609.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000632.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000639.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000658.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000663.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
tpe|BN000667.1| TPA: Oryza sativa (japonica cultivar-group)... 46 0.049
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 46 0.049
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 46 0.049
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.049
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.049
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.049
gb|AQ871909.1|AQ871909 nbeb0045E08r CUGI Rice BAC Library (... 44 0.19
gb|D24271.1|D24271 RICR1617A Rice root Oryza sativa (japoni... 44 0.19
gb|D24395.1|D24395 RICR1833A Rice root Oryza sativa (japoni... 44 0.19
gb|C99716.1|C99716 C99716 Rice panicle (longer than 10cm) O... 44 0.19
gb|AU173033.1|AU173033 AU173033 Rice cDNA from immature lea... 44 0.19
gb|CA753734.1|CA753734 BR040001000_PLATE_B07_50_059.ab1 OA ... 44 0.19
gb|CA754869.1|CA754869 BR030007002_BR030_E03_21_021.ab1 OA ... 44 0.19
gb|CB642488.1|CB642488 OSJNEb02L03.r OSJNEb Oryza sativa (j... 44 0.19
gb|CB642574.1|CB642574 OSJNEb02N05.f OSJNEb Oryza sativa (j... 44 0.19
gb|CB642575.1|CB642575 OSJNEb02N05.r OSJNEb Oryza sativa (j... 44 0.19
gb|CB646375.1|CB646375 OSJNEb08N01.f OSJNEb Oryza sativa (j... 44 0.19
gb|CB646376.1|CB646376 OSJNEb08N01.r OSJNEb Oryza sativa (j... 44 0.19
gb|CB650950.1|CB650950 OSJNEb15L05.f OSJNEb Oryza sativa (j... 44 0.19
gb|CB652988.1|CB652988 OSJNEc03J08.f OSJNEc Oryza sativa (j... 44 0.19
gb|CB653393.1|CB653393 OSJNEc04G02.r OSJNEc Oryza sativa (j... 44 0.19
gb|CB656605.1|CB656605 OSJNEc11C14.r OSJNEc Oryza sativa (j... 44 0.19
gb|CB659478.1|CB659478 OSJNEc16I03.r OSJNEc Oryza sativa (j... 44 0.19
gb|CB659663.1|CB659663 OSJNEc16N10.f OSJNEc Oryza sativa (j... 44 0.19
gb|CB662183.1|CB662183 OSJNEd05P17.f OSJNEd Oryza sativa (j... 44 0.19
gb|CB664444.1|CB664444 OSJNEd10C17.r OSJNEd Oryza sativa (j... 44 0.19
gb|CB664485.1|CB664485 OSJNEd10D17.r OSJNEd Oryza sativa (j... 44 0.19
gb|CB667009.1|CB667009 OSJNEd14C10.r OSJNEd Oryza sativa (j... 44 0.19
dbj|AP003757.2| Oryza sativa (japonica cultivar-group) geno... 44 0.19
dbj|AK058884.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
dbj|AK060007.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
dbj|AK060984.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
dbj|AK064619.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
dbj|AK104448.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
dbj|AK107203.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.19
gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 ... 44 0.19
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 44 0.19
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 44 0.19
gb|AACV01006709.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
gb|AACV01007968.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
gb|AACV01017019.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
>gb|CB647818.1|CB647818 OSJNEb10O18.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10O18 3', mRNA sequence
Length = 759
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 633 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 574
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 573 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 514
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 513 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 454
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 453 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 413
>gb|CB650455.1|CB650455 OSJNEb14O11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14O11 3', mRNA sequence
Length = 787
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 593 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 534
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 533 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 474
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 473 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 414
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 413 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 373
>dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102I07, full
insert sequence
Length = 1358
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Plus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 816 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 875
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 876 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 935
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 936 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 995
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 996 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1036
Score = 155 bits (78), Expect = 7e-035
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 110 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 169
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 170 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 229
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 230 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 283
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 305 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 364
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 365 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 424
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 425 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 478
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 580 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 639
Query: 588 cgcactgc 595
| ||||||
Sbjct: 640 cccactgc 647
>dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E17, full
insert sequence
Length = 1344
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Plus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 817 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 876
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 877 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 936
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 937 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 996
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 997 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1037
Score = 155 bits (78), Expect = 7e-035
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 111 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 170
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 171 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 230
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 231 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 284
Score = 131 bits (66), Expect = 1e-027
Identities = 147/174 (84%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 306 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 365
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 366 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 425
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||| ||| ||||| ||||||||||||||||||||
Sbjct: 426 cttcatggcgcgggacggcgtcgcgctgtccggcggcctcggctaccaggtgcc 479
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 581 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 640
Query: 588 cgcactgc 595
| ||||||
Sbjct: 641 cccactgc 648
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0099P06, complete sequence
Length = 135117
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 8454 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 8395
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 8394 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 8335
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 8334 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 8275
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 8274 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 8234
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 9454 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 9395
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 9394 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 9335
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 9334 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 9281
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 9911 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 9852
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 9851 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 9792
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 9791 gcatttccacgactgcttcgtcaggg 9766
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 9179 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 9120
Query: 588 cgcactgc 595
| ||||||
Sbjct: 9119 cccactgc 9112
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 9505 gggctgcgacggctcggtgctgatcgacac 9476
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12,
complete sequence
Length = 156263
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 151738 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 151679
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 151678 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 151619
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 151618 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 151559
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 151558 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 151518
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 152738 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 152679
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 152678 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 152619
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 152618 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 152565
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 153195 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 153136
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 153135 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 153076
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 153075 gcatttccacgactgcttcgtcaggg 153050
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 152463 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 152404
Query: 588 cgcactgc 595
| ||||||
Sbjct: 152403 cccactgc 152396
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 152789 gggctgcgacggctcggtgctgatcgacac 152760
>gb|AACV01010937.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010937, whole
genome shotgun sequence
Length = 43603
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 28676 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 28617
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 28616 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 28557
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 28556 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 28497
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 28496 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 28456
Score = 125 bits (63), Expect = 7e-026
Identities = 148/175 (84%), Gaps = 1/175 (0%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctcc-ggttcttcgacgtggtcgacc 311
||||||||||||||| | || |||||||| ||||||| |||||||||||||| ||||||
Sbjct: 29677 ggcggagaaggacgccgcgccaaacaacccgagcctcccggttcttcgacgtgatcgacc 29618
Query: 312 gtgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcg 371
| |||||| || | | ||||| |||||| ||||| ||||||||||||||||| |||
Sbjct: 29617 gcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcg 29558
Query: 372 ccttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 29557 ccttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 29503
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 30134 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 30075
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 30074 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 30015
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 30014 gcatttccacgactgcttcgtcaggg 29989
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 29401 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 29342
Query: 588 cgcactgc 595
| ||||||
Sbjct: 29341 cccactgc 29334
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 29728 gggctgcgacggctcggtgctgatcgacac 29699
>tpe|BN000601.1| TPA: Oryza sativa (japonica cultivar-group) prx72 gene for class III
peroxidase 72 precursor, exons 1-3
Length = 1816
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Plus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 1511 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 1570
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 1571 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 1630
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 1631 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 1690
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 1691 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 1731
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 511 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 570
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 571 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 630
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 631 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 684
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 54 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 113
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 114 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 173
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 174 gcatttccacgactgcttcgtcaggg 199
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 786 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 845
Query: 588 cgcactgc 595
| ||||||
Sbjct: 846 cccactgc 853
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 460 gggctgcgacggctcggtgctgatcgacac 489
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 2676495 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 2676436
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 2676435 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 2676376
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 2676375 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 2676316
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 2676315 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 2676275
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 2677495 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 2677436
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 2677435 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 2677376
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 2677375 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 2677322
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 2677952 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 2677893
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2677892 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 2677833
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 2677832 gcatttccacgactgcttcgtcaggg 2677807
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 2677220 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 2677161
Query: 588 cgcactgc 595
| ||||||
Sbjct: 2677160 cccactgc 2677153
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 2677546 gggctgcgacggctcggtgctgatcgacac 2677517
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 1081283 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 1081323
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggc 381
||||| ||||||||||||||||||||| | |||| ||||||||
Sbjct: 1092391 tgcccgggcgtggtctcctgcgccgacatcgtcgcgttcgcggc 1092434
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 560 ctctcgggcgcgcacaccatcggcgtctcgcactgcagcggcttcgccggcc 611
||||| ||||||||| ||||||||||| | ||||||| | |||||||||||
Sbjct: 1075771 ctctccggcgcgcactccatcggcgtcacccactgcacctccttcgccggcc 1075822
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||| |||||||||||||||||||||
Sbjct: 1043823 gtgcccgggcgtggtctcctgcgccgac 1043850
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 3582529 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 3582470
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 3582469 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 3582410
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 3582409 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 3582350
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 3582349 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 3582309
Score = 125 bits (63), Expect = 7e-026
Identities = 148/175 (84%), Gaps = 1/175 (0%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctcc-ggttcttcgacgtggtcgacc 311
||||||||||||||| | || |||||||| ||||||| |||||||||||||| ||||||
Sbjct: 3583530 ggcggagaaggacgccgcgccaaacaacccgagcctcccggttcttcgacgtgatcgacc 3583471
Query: 312 gtgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcg 371
| |||||| || | | ||||| |||||| ||||| ||||||||||||||||| |||
Sbjct: 3583470 gcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcg 3583411
Query: 372 ccttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 3583410 ccttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 3583356
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 3583987 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 3583928
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 3583927 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 3583868
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 3583867 gcatttccacgactgcttcgtcaggg 3583842
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 3583254 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 3583195
Query: 588 cgcactgc 595
| ||||||
Sbjct: 3583194 cccactgc 3583187
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 3583581 gggctgcgacggctcggtgctgatcgacac 3583552
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 2002452 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 2002492
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggc 381
||||| ||||||||||||||||||||| | |||| ||||||||
Sbjct: 2013657 tgcccgggcgtggtctcctgcgccgacatcgtcgcgttcgcggc 2013700
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 560 ctctcgggcgcgcacaccatcggcgtctcgcactgcagcggcttcgccggcc 611
||||| ||||||||| ||||||||||| | ||||||| | |||||||||||
Sbjct: 1996940 ctctccggcgcgcactccatcggcgtcacccactgcacctccttcgccggcc 1996991
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||| |||||||||||||||||||||
Sbjct: 1963526 gtgcccgggcgtggtctcctgcgccgac 1963553
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 3582529 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 3582470
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 3582469 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 3582410
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 3582409 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 3582350
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 3582349 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 3582309
Score = 125 bits (63), Expect = 7e-026
Identities = 148/175 (84%), Gaps = 1/175 (0%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctcc-ggttcttcgacgtggtcgacc 311
||||||||||||||| | || |||||||| ||||||| |||||||||||||| ||||||
Sbjct: 3583530 ggcggagaaggacgccgcgccaaacaacccgagcctcccggttcttcgacgtgatcgacc 3583471
Query: 312 gtgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcg 371
| |||||| || | | ||||| |||||| ||||| ||||||||||||||||| |||
Sbjct: 3583470 gcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcg 3583411
Query: 372 ccttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 3583410 ccttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 3583356
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 3583987 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 3583928
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 3583927 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 3583868
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 3583867 gcatttccacgactgcttcgtcaggg 3583842
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 3583254 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 3583195
Query: 588 cgcactgc 595
| ||||||
Sbjct: 3583194 cccactgc 3583187
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 3583581 gggctgcgacggctcggtgctgatcgacac 3583552
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 2002452 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 2002492
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggc 381
||||| ||||||||||||||||||||| | |||| ||||||||
Sbjct: 2013657 tgcccgggcgtggtctcctgcgccgacatcgtcgcgttcgcggc 2013700
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 560 ctctcgggcgcgcacaccatcggcgtctcgcactgcagcggcttcgccggcc 611
||||| ||||||||| ||||||||||| | ||||||| | |||||||||||
Sbjct: 1996940 ctctccggcgcgcactccatcggcgtcacccactgcacctccttcgccggcc 1996991
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||| |||||||||||||||||||||
Sbjct: 1963526 gtgcccgggcgtggtctcctgcgccgac 1963553
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 24159061 gtctcctgcgccgacgtgctcgc 24159083
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 200 bits (101), Expect = 1e-048
Identities = 191/221 (86%)
Strand = Plus / Minus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| |||||||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 3586107 gacaacaggtactacgtcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 3586048
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 3586047 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 3585988
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 3585987 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 3585928
Query: 968 acgcagggcgagatcaggcgcaactgcagggtcatcaaccc 1008
||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 3585927 acgcagggcgagatcaggctcaactgcagggtcgtcaaccc 3585887
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Minus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 3587107 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 3587048
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 3587047 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 3586988
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 3586987 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 3586934
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 3587564 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 3587505
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 3587504 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 3587445
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 3587444 gcatttccacgactgcttcgtcaggg 3587419
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 3586832 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 3586773
Query: 588 cgcactgc 595
| ||||||
Sbjct: 3586772 cccactgc 3586765
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 208 gggctgcgatggctcggtgctgatcgacac 237
||||||||| ||||||||||||||||||||
Sbjct: 3587158 gggctgcgacggctcggtgctgatcgacac 3587129
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 1990888 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 1990928
Score = 48.1 bits (24), Expect = 0.012
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggc 381
||||| ||||||||||||||||||||| | |||| ||||||||
Sbjct: 2001996 tgcccgggcgtggtctcctgcgccgacatcgtcgcgttcgcggc 2002039
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 560 ctctcgggcgcgcacaccatcggcgtctcgcactgcagcggcttcgccggcc 611
||||| ||||||||| ||||||||||| | ||||||| | |||||||||||
Sbjct: 1985376 ctctccggcgcgcactccatcggcgtcacccactgcacctccttcgccggcc 1985427
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||| |||||||||||||||||||||
Sbjct: 1953428 gtgcccgggcgtggtctcctgcgccgac 1953455
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 24438622 gtctcctgcgccgacgtgctcgc 24438644
>gb|C96957.1|C96957 C96957 Rice callus Oryza sativa (japonica cultivar-group) cDNA clone
C50195_6Z, mRNA sequence
Length = 721
Score = 180 bits (91), Expect = 1e-042
Identities = 190/222 (85%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 788 gacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacgtggcg 847
||||||| ||| ||| |||| ||||| |||||||| ||||||||| |||| |||| ||||
Sbjct: 176 gacaacaggtactacntcgggctgacaaacaacctcggcctcttccagtcggacgcggcg 235
Query: 848 ctgctgaccaacgcgacgatgaaggccctggtcgactccttcgtgcgcagcgaggcgact 907
|||||||| |||| || | |||||| ||| |||||||||||||||||||||||||
Sbjct: 236 ctgctgacggacgccgcgctcaaggccacggtgaactccttcgtgcgcagcgaggcgacg 295
Query: 908 ttcaggaccaagtttgccaggtccatgatcaagatggggcagatcgaggtgctgacgggg 967
||| || |||||| |||||| |||||||||||||||||||||||| |||||| | |||
Sbjct: 296 ttccggctcaagttcgccagggccatgatcaagatggggcagatcggcgtgctgtccggg 355
Query: 968 acgcagggcgagat-caggcgcaactgcagggtcatcaaccc 1008
|||||||||||||| ||||| ||||||||||||| |||||||
Sbjct: 356 acgcagggcgagatccaggctcaactgcagggtcgtcaaccc 397
>gb|CA753810.1|CA753810 BR040002000_PLATE_H07_56_063.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040002000_PLATE_H07_56_063.ab1 similar to peroxidase
[Zea mays], mRNA sequence
Length = 629
Score = 155 bits (78), Expect = 7e-035
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 97 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 156
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 157 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 216
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 217 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 270
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 292 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 351
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 352 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 411
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 412 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 465
Score = 60.0 bits (30), Expect = 3e-006
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 531 agaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctc 588
|||||||||| ||||||| ||||||| ||||| ||||| |||||||||||||||||
Sbjct: 570 agaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtctc 627
>gb|CB650454.1|CB650454 OSJNEb14O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14O11 5', mRNA sequence
Length = 741
Score = 155 bits (78), Expect = 7e-035
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 17 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 76
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 77 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 136
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 137 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 190
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 212 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 271
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 272 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 331
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 332 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 385
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 487 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 546
Query: 588 cgcactgc 595
| ||||||
Sbjct: 547 cccactgc 554
>gb|CB653561.1|CB653561 OSJNEc04L07.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04L07 5', mRNA sequence
Length = 656
Score = 155 bits (78), Expect = 7e-035
Identities = 150/174 (86%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 17 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 76
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 77 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 136
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 137 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 190
Score = 139 bits (70), Expect = 4e-030
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttcttcgacgtggtcgaccg 312
||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||||
Sbjct: 212 ggcggagaaggacgccgcgccaaacaacccgagcctccggttcttcgacgtgatcgaccg 271
Query: 313 tgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||| || | | ||||| |||||| ||||| ||||||||||||||||| ||||
Sbjct: 272 cgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcgc 331
Query: 373 cttcgcggccagggacagcgtcgtgctctccggtggcctcggctaccaggtgcc 426
|||| ||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct: 332 cttcatggcgcgggacggcgtcgtgctgtccggcggcctcggctaccaggtgcc 385
Score = 71.9 bits (36), Expect = 9e-010
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 528 ccaagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggcgtct 587
||||||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 487 ccaagaacctcaccgccgaggacatggtcgtcctctccggcgcccacaccatcggcgtct 546
Query: 588 cgcactgc 595
| ||||||
Sbjct: 547 cccactgc 554
>gb|AU181231.1|AU181231 AU181231 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C11007, mRNA sequence
Length = 432
Score = 147 bits (74), Expect = 2e-032
Identities = 149/174 (85%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || | ||||| || | ||
Sbjct: 96 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggtggagacgctcataca 155
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 156 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 215
Query: 184 gcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 216 gcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 269
Score = 81.8 bits (41), Expect = 9e-013
Identities = 105/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 253 ggcggagaaggacgcgccacccaacaaccccagcctccggttc-ttcgacgtggtcgacc 311
||||||||||||||| | || |||||||| |||||||||||| ||||||||| ||||||
Sbjct: 291 ggcggagaaggacgccgcgccaaacaacccgagcctccggttctttcgacgtgatcgacc 350
Query: 312 gtgccaaggcgtcactggaggctcagtgccccggcgtggtctcctgcgccgacgtgctcg 371
| |||||| || | | ||||| |||||| ||||| ||||||||||||||||| |||
Sbjct: 351 gcgccaagtcggccgtcgaggcggcgtgcccgggcgtcgtctcctgcgccgacgtcgtcg 410
Query: 372 ccttc 376
|||||
Sbjct: 411 ccttc 415
>gb|C96956.1|C96956 C96956 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50195_2A, mRNA sequence
Length = 348
Score = 135 bits (68), Expect = 7e-029
Identities = 149/175 (85%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| | || ||||| || | ||
Sbjct: 84 cgcctgcctcgacgtcggcttctacgacacgacgtgcccganggcggagacgctcataca 143
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgc-tgatccgca 182
|||| ||| || ||||| ||| | ||| ||||||||||||| |||| | |||||||||
Sbjct: 144 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggaccatgatccgca 203
Query: 183 tgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacac 237
|||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 204 tgcatttccacgactgcttcgtcaggggctgcgacggctcggtgctgatcgacac 258
Score = 52.0 bits (26), Expect = 8e-004
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 275 aacaaccccagcctccggttctt-cgacgtggtcgaccgtgccaag 319
|||||||| |||||||||||||| ||||||| ||||||| ||||||
Sbjct: 302 aacaacccgagcctccggttcttncgacgtgatcgaccgagccaag 347
>gb|AZ134701.1|AZ134701 OSJNBb0113K16f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0113K16f, DNA
sequence
Length = 458
Score = 107 bits (54), Expect = 2e-020
Identities = 123/146 (84%)
Strand = Plus / Plus
Query: 64 cgcctgcctcgacgtcggcttctacgacaggacatgccccactgccgagaccatcgtgca 123
||||||||||||||||||||||||||||| ||| ||||| || || ||||| || | ||
Sbjct: 239 cgcctgcctcgacgtcggcttctacgacacgacgtgcccgacggcggagacgctcataca 298
Query: 124 gcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatccgcat 183
|||| ||| || ||||| ||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 299 gcaggtcgtcgccgccgccttccgcaacgactccggcgtcgcgccggccatgatccgcat 358
Query: 184 gcacttccatgactgctttgtcaggg 209
||| ||||| |||||||| |||||||
Sbjct: 359 gcatttccacgactgcttcgtcaggg 384
>gb|CV723003.1|CV723003 root--02-D14.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone root--02-D14,
mRNA sequence
Length = 397
Score = 101 bits (51), Expect = 1e-018
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 934 gatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgcaactg 993
|||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||||
Sbjct: 397 gatcaagatggggcagatcggcgtgctgtccgggacgcagggcgagatcaggctcaactg 338
Query: 994 cagggtcatcaaccc 1008
||||||| |||||||
Sbjct: 337 cagggtcgtcaaccc 323
>gb|AU082060.1|AU082060 AU082060 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0871, mRNA sequence
Length = 353
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 89 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 148
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 149 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 205
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 226 cgcgccaccaaacaaccccagcctccg 252
>gb|AU184426.1|AU184426 AU184426 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2263, mRNA sequence
Length = 466
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 157 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 216
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 217 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 273
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 379 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 424
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 294 cgcgccaccaaacaaccccagcctccg 320
>gb|CB652588.1|CB652588 OSJNEc02M04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02M04 5', mRNA sequence
Length = 787
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 142 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 201
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 202 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 258
Score = 69.9 bits (35), Expect = 3e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 644 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 703
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttca 833
| | ||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 704 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttca 754
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 493 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 543
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 298 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 343
>gb|CB656472.1|CB656472 OSJNEc10N13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10N13 5', mRNA sequence
Length = 798
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 143 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 202
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 203 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 259
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 560 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 610
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 365 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 410
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccgg 779
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 711 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccgg 767
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 280 cgcgccaccaaacaaccccagcctccg 306
>dbj|AK068063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129I12, full
insert sequence
Length = 1348
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 166 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 225
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 226 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 282
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 732 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 791
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 792 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 851
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 852 acgcgctgctcaccaacgc 870
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 581 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 631
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 979 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 1018
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 386 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 431
>dbj|AK099241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O19, full
insert sequence
Length = 1350
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 166 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 225
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 226 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 282
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 734 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 793
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 794 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 853
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 854 acgcgctgctcaccaacgc 872
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 583 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 633
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 981 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 1020
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 388 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 433
>ref|NM_183819.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1056
Score = 97.6 bits (49), Expect = 1e-017
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 124 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 183
Query: 179 cgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgac 235
||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 184 cgcctgcacttccatgactgctttgtcagaggctgcgacgcctcggttttgatcgac 240
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 692 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 751
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 752 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 811
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 812 acgcgctgctcaccaacgc 830
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 541 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 591
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 939 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 978
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 346 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 391
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 261 cgcgccaccaaacaaccccagcctccg 287
>gb|CF335607.1|CF335607 JMT--05-F13.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--05-F13, mRNA sequence
Length = 555
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 164 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 223
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 224 cgcctgcacttccatgactgctttgtcag 252
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1135C02
Length = 152306
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 146847 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 146906
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 146907 cgcctgcacttccatgactgctttgtcag 146935
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 150134 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 150193
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 150194 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 150253
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 150254 acgcgctgctcaccaacgc 150272
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 149983 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 150033
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 78234 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 78292
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 78293 ccgtctgcacttccatgactgctttgtcag 78322
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 150381 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 150420
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 149788 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 149833
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 137052 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 137096
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 125338 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 125397
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 125398 actgcagcgtcgtcaac 125414
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 149703 cgcgccaccaaacaaccccagcctccg 149729
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0537A05
Length = 152396
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 72842 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 72901
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 72902 cgcctgcacttccatgactgctttgtcag 72930
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 76129 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 76188
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 76189 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 76248
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 76249 acgcgctgctcaccaacgc 76267
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 75978 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 76028
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 4229 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 4287
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 4288 ccgtctgcacttccatgactgctttgtcag 4317
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 76376 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 76415
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 75783 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 75828
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 63047 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 63091
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 51333 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 51392
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 51393 actgcagcgtcgtcaac 51409
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 75698 cgcgccaccaaacaaccccagcctccg 75724
>gb|AACV01000923.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000923, whole
genome shotgun sequence
Length = 29511
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 20384 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 20325
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 20324 cgcctgcacttccatgactgctttgtcag 20296
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 17095 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 17036
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 17035 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 16976
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 16975 acgcgctgctcaccaacgc 16957
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 17246 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 17196
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 16848 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 16809
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 17441 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 17396
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 17526 cgcgccaccaaacaaccccagcctccg 17500
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 12559014 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 12559073
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12559074 cgcctgcacttccatgactgctttgtcag 12559102
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 12562301 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 12562360
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 12562361 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 12562420
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 12562421 acgcgctgctcaccaacgc 12562439
Score = 75.8 bits (38), Expect = 5e-011
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 470 ctcaacaacctgcctccgccgttcttcaacgccaccgagctggcagacaggttcgcctcc 529
||||||||||| || ||||||||||||||||||||| |||| | | | | |||||| ||
Sbjct: 10677839 ctcaacaacctcccgccgccgttcttcaacgccacccagctcgtcgccggcttcgccgcc 10677780
Query: 530 aagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggc 583
||||||||||| ||| ||| |||| |||||||| ||||||||| || |||||
Sbjct: 10677779 aagaacctcaccgccgacgacatggtggtgctctccggcgcgcactccttcggc 10677726
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 12562150 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 12562200
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 12490401 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 12490459
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12490460 ccgtctgcacttccatgactgctttgtcag 12490489
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 12562548 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 12562587
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
||||||||||||||||||||||||||||
Sbjct: 10698171 gtgccccggcgtggtctcctgcgccgac 10698144
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 12561955 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 12562000
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 12549219 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 12549263
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 12537505 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 12537564
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 12537565 actgcagcgtcgtcaac 12537581
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 10687860 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 10687820
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||||||||| |||||||||||||||
Sbjct: 10709680 gtgccccggcgtcgtctcctgcgccgac 10709653
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 548 gacctggtcgtgctctcgggcgcgcacaccatcggc 583
||||| |||| |||||| ||||||||||||||||||
Sbjct: 9338317 gacctcgtcgcgctctccggcgcgcacaccatcggc 9338352
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 12561870 cgcgccaccaaacaaccccagcctccg 12561896
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgac 364
||||||||||| |||||||||||||||
Sbjct: 10716954 tgccccggcgtcgtctcctgcgccgac 10716928
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 187 cttccatgactgctttgtcaggg 209
|||||||||||||||||||||||
Sbjct: 10698800 cttccatgactgctttgtcaggg 10698778
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 1068239 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 1068298
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 1068299 cgcctgcacttccatgactgctttgtcag 1068327
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 1071526 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 1071585
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 1071586 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 1071645
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 1071646 acgcgctgctcaccaacgc 1071664
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 1071375 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 1071425
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 999626 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 999684
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 999685 ccgtctgcacttccatgactgctttgtcag 999714
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 1071773 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 1071812
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 1071180 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 1071225
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 1058444 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 1058488
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 1046730 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 1046789
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 1046790 actgcagcgtcgtcaac 1046806
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 1071095 cgcgccaccaaacaaccccagcctccg 1071121
>tpe|BN000545.1| TPA: Oryza sativa (japonica cultivar-group) prx16 gene for class
III peroxidase 16 precursor, exons 1-2
Length = 3775
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 124 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 183
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 184 cgcctgcacttccatgactgctttgtcag 212
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 3411 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 3470
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 3471 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 3530
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 3531 acgcgctgctcaccaacgc 3549
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 3260 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 3310
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 3658 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 3697
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 3065 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 3110
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 2980 cgcgccaccaaacaaccccagcctccg 3006
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002
genomic scaffold, whole genome shotgun sequence
Length = 5008528
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 905394 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 905453
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 905454 cgcctgcacttccatgactgctttgtcag 905482
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 908683 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 908742
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 908743 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 908802
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 908803 acgcgctgctcaccaacgc 908821
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 908532 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 908582
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 833336 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 833394
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 833395 ccgtctgcacttccatgactgctttgtcag 833424
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 908930 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 908969
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 908337 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 908382
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 895678 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 895722
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 883995 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 884054
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 884055 actgcagcgtcgtcaac 884071
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 908252 cgcgccaccaaacaaccccagcctccg 908278
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 12521889 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 12521948
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12521949 cgcctgcacttccatgactgctttgtcag 12521977
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 12525178 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 12525237
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 12525238 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 12525297
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 12525298 acgcgctgctcaccaacgc 12525316
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 12525027 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 12525077
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 12449831 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 12449889
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12449890 ccgtctgcacttccatgactgctttgtcag 12449919
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 12525425 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 12525464
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
||||||||||||||||||||||||||||
Sbjct: 10944216 gtgccccggcgtggtctcctgcgccgac 10944189
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 12524832 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 12524877
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 12512173 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 12512217
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 12500490 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 12500549
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 12500550 actgcagcgtcgtcaac 12500566
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 337 gtgccccggcgtggtctcctgcgccgacgtgctcgc 372
|||||||||||| ||| ||||||||||||| |||||
Sbjct: 26942194 gtgccccggcgtcgtcacctgcgccgacgtcctcgc 26942229
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||||||||| |||||||||||||||
Sbjct: 10955726 gtgccccggcgtcgtctcctgcgccgac 10955699
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 548 gacctggtcgtgctctcgggcgcgcacaccatcggc 583
||||| |||| |||||| ||||||||||||||||||
Sbjct: 9362253 gacctcgtcgcgctctccggcgcgcacaccatcggc 9362288
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 12524747 cgcgccaccaaacaaccccagcctccg 12524773
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgac 364
||||||||||| |||||||||||||||
Sbjct: 10963000 tgccccggcgtcgtctcctgcgccgac 10962974
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 187 cttccatgactgctttgtcaggg 209
|||||||||||||||||||||||
Sbjct: 10944845 cttccatgactgctttgtcaggg 10944823
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 81.8 bits (41), Expect = 9e-013
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgctccggcgctgatc 178
||||||||| | ||||| |||||||||| ||||||| ||||||||| || | || |||
Sbjct: 12561232 gtgcagcaggcggtggccgccgcgttcaagaacaacagcggcgtcgcccccggcctcatc 12561291
Query: 179 cgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12561292 cgcctgcacttccatgactgctttgtcag 12561320
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 12564519 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 12564578
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 12564579 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 12564638
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 12564639 acgcgctgctcaccaacgc 12564657
Score = 75.8 bits (38), Expect = 5e-011
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 470 ctcaacaacctgcctccgccgttcttcaacgccaccgagctggcagacaggttcgcctcc 529
||||||||||| || ||||||||||||||||||||| |||| | | | | |||||| ||
Sbjct: 10680057 ctcaacaacctcccgccgccgttcttcaacgccacccagctcgtcgccggcttcgccgcc 10679998
Query: 530 aagaacctcactatcgaggacctggtcgtgctctcgggcgcgcacaccatcggc 583
||||||||||| ||| ||| |||| |||||||| ||||||||| || |||||
Sbjct: 10679997 aagaacctcaccgccgacgacatggtggtgctctccggcgcgcactccttcggc 10679944
Score = 61.9 bits (31), Expect = 8e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 545 gaggacctggtcgtgctctcgggcgcgcacaccatcggcgtctcgcactgc 595
|||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 12564368 gaggacatggtggtgctctccggcgcccacaccatcggcgtctcccactgc 12564418
Score = 60.0 bits (30), Expect = 3e-006
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 119 gtgcagcagaccgtggcggccgcgttcaggaacaactccggcgtcgct-ccggcgctgat 177
||||||||| | ||||| ||||| |||| ||||||| ||||||||| ||||| || ||
Sbjct: 12492619 gtgcagcaggcggtggccgccgccttcaagaacaacagcggcgtcgccgccggc-ctcat 12492677
Query: 178 ccgcatgcacttccatgactgctttgtcag 207
||| |||||||||||||||||||||||||
Sbjct: 12492678 ccgtctgcacttccatgactgctttgtcag 12492707
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 12564766 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 12564805
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
||||||||||||||||||||||||||||
Sbjct: 10700389 gtgccccggcgtggtctcctgcgccgac 10700362
Score = 52.0 bits (26), Expect = 8e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcg 395
||||||||||||||| | ||||||||||| ||| | ||||||||||
Sbjct: 12564173 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtcg 12564218
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtc 394
||||||||||||||| | ||||||||||| ||| | |||||||||
Sbjct: 12551437 gtctcctgcgccgacatcctcgccttcgccgcccgcgacagcgtc 12551481
Score = 50.1 bits (25), Expect = 0.003
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 930 ccatgatcaagatggggcagatcgaggtgctgacggggacgcagggcgagatcaggcgca 989
||||| ||||||||||| ||||||||||| || || | ||||||||| |||||| ||
Sbjct: 12539723 ccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctca 12539782
Query: 990 actgcagggtcatcaac 1006
||||||| ||| |||||
Sbjct: 12539783 actgcagcgtcgtcaac 12539799
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgc 378
||||||||| |||||||||||||||| | |||||||||||
Sbjct: 10690078 tgccccggcaaggtctcctgcgccgacatcctcgccttcgc 10690038
Score = 48.1 bits (24), Expect = 0.012
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 337 gtgccccggcgtggtctcctgcgccgac 364
|||||||||||| |||||||||||||||
Sbjct: 10711898 gtgccccggcgtcgtctcctgcgccgac 10711871
Score = 48.1 bits (24), Expect = 0.012
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 548 gacctggtcgtgctctcgggcgcgcacaccatcggc 583
||||| |||| |||||| ||||||||||||||||||
Sbjct: 9340535 gacctcgtcgcgctctccggcgcgcacaccatcggc 9340570
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 265 cgcgccacccaacaaccccagcctccg 291
||||||||| |||||||||||||||||
Sbjct: 12564088 cgcgccaccaaacaaccccagcctccg 12564114
Score = 46.1 bits (23), Expect = 0.049
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgac 364
||||||||||| |||||||||||||||
Sbjct: 10719172 tgccccggcgtcgtctcctgcgccgac 10719146
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 187 cttccatgactgctttgtcaggg 209
|||||||||||||||||||||||
Sbjct: 10701018 cttccatgactgctttgtcaggg 10700996
>gb|AU082061.1|AU082061 AU082061 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0871, mRNA sequence
Length = 714
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 78 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 137
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 138 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 197
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 198 acgcgctgctcaccaacgc 216
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 325 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 364
>gb|AU184453.1|AU184453 AU184453 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2348, mRNA sequence
Length = 397
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 259 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 318
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 319 gggaacagcacggcggagaaggacgcg 345
>gb|AU184536.1|AU184536 AU184536 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2769, mRNA sequence
Length = 449
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 258 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 317
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 318 gggaacagcacggcggagaaggacgcg 344
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 423 gtctcctgcgccgacgtgctcgc 445
>gb|CA756079.1|CA756079 BR030034000_PLATE_E08_61_066.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030034000_PLATE_E08_61_066.ab1 similar to Peroxidase
precursor gi|7433074|pir|T03928 probable peroxidase (EC
1.11.1.7) - rice gi|287401|dbj|BAA03644.1| (D14997)
peroxidase [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 609
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 254 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 313
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 314 gggaacagcacggcggagaaggacgcg 340
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 419 gtctcctgcgccgacgtgctcgc 441
>gb|CB653413.1|CB653413 OSJNEc04G18.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04G18 3', mRNA sequence
Length = 687
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 617 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 558
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 557 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 498
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 497 acgcgctgctcaccaacgc 479
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 370 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 331
>gb|CB659835.1|CB659835 OSJNEd01B22.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01B22 3', mRNA sequence
Length = 604
Score = 77.8 bits (39), Expect = 1e-011
Identities = 114/139 (82%)
Strand = Plus / Minus
Query: 723 ccaacaccagccagttcttcccgaacacgacggtgttcatggacctcatcacgccggaaa 782
|||||| ||||||||||||||| ||||| |||||| ||||||| | ||||| ||||
Sbjct: 537 ccaacagcagccagttcttccccaacaccacggtggacatggacgtgatcaccccggcgg 478
Query: 783 ggtttgacaacaagtaatacgtcggcctgaccaacaacctgggcctcttcaagtcagacg 842
| | ||||||||||| |||||||| | ||||||||||||||||||||| ||| |||
Sbjct: 477 cgctcgacaacaagtactacgtcggggtcgccaacaacctgggcctcttcacgtcggacc 418
Query: 843 tggcgctgctgaccaacgc 861
|||||||| ||||||||
Sbjct: 417 acgcgctgctcaccaacgc 399
Score = 56.0 bits (28), Expect = 5e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 967 gacgcagggcgagatcaggcgcaactgcagggtcatcaac 1006
||||||||||||| |||||| ||||||||||||| |||||
Sbjct: 290 gacgcagggcgaggtcaggctcaactgcagggtcgtcaac 251
>gb|CO435937.1|CO435937 OsMR571 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 862
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 324 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 383
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 384 gggaacagcacggcggagaaggacgcg 410
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 489 gtctcctgcgccgacgtgctcgc 511
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full
insert sequence
Length = 1348
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 276 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 335
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 336 gggaacagcacggcggagaaggacgcg 362
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 441 gtctcctgcgccgacgtgctcgc 463
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full
insert sequence
Length = 1347
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 182 atgcacttccatgactgctttgtcaggggctgcgatggctcggtgctgatcgacacggta 241
||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||| |||
Sbjct: 275 atgcacttccacgactgcttcgtcaggggttgcgacggctcggtgctgctcgactcggcc 334
Query: 242 ggcaacctgacggcggagaaggacgcg 268
|| ||| ||||||||||||||||||
Sbjct: 335 gggaacagcacggcggagaaggacgcg 361
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 350 gtctcctgcgccgacgtgctcgc 372
|||||||||||||||||||||||
Sbjct: 440 gtctcctgcgccgacgtgctcgc 462
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08,
complete sequence
Length = 100986
Score = 77.8 bits (39), Expect = 1e-011
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtg 397
||||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| |||||| |
Sbjct: 74837 tgcccaggcgtcgtctcctgcgccgacgtcctcgcctacgccgccagggacggcgtcgcg 74778
Query: 398 ctctccggtggcctcggctaccaggtgccgggcgg 432
||| |||| |||| | ||||| | || ||||||||
Sbjct: 74777 ctcaccgggggcccccgctacgacgtcccgggcgg 74743
Score = 65.9 bits (33), Expect = 5e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 347 gtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtgct 399
|||||||||||||| ||| | ||||||||||| ||||| ||||||||||||||
Sbjct: 63009 gtggtctcctgcgcggacatactcgccttcgccgccagagacagcgtcgtgct 62957
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 563 tcgggcgcgcacaccatcggcgtctcgcactgcagc 598
||||||||||||||||||||||| ||||||||||||
Sbjct: 56402 tcgggcgcgcacaccatcggcgtgtcgcactgcagc 56367
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 343 cggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggac 388
|||||| ||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 58447 cggcgtcgtctcctgcgccgacgtcctcgccttcgccgcccgggac 58402
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 177 tccgcatgcacttccatgactgctttgtcaggg 209
|||||||||||||||| |||||||| |||||||
Sbjct: 75069 tccgcatgcacttccacgactgcttcgtcaggg 75037
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 938 aagatggggcagatcgaggtgct 960
|||||||||||||||||||||||
Sbjct: 74258 aagatggggcagatcgaggtgct 74236
Score = 44.1 bits (22), Expect = 0.19
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 177 tccgcatgcacttccatgactgctttgtca 206
|||| |||||||||||||||||||| ||||
Sbjct: 63291 tccggatgcacttccatgactgcttcgtca 63262
>gb|AACV01005779.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005779, whole
genome shotgun sequence
Length = 59655
Score = 77.8 bits (39), Expect = 1e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtg 397
||||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| |||||| |
Sbjct: 58887 tgcccaggcgtcgtctcctgcgccgacgtcctcgcctacgccgccagggacggcgtcgcg 58946
Query: 398 ctctccggtggcctcggctaccaggtgccgggcgg 432
||| |||| |||| | ||||| | || ||||||||
Sbjct: 58947 ctcaccgggggcccccgctacgacgtcccgggcgg 58981
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 177 tccgcatgcacttccatgactgctttgtcaggg 209
|||||||||||||||| |||||||| |||||||
Sbjct: 58655 tccgcatgcacttccacgactgcttcgtcaggg 58687
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 938 aagatggggcagatcgaggtgct 960
|||||||||||||||||||||||
Sbjct: 59466 aagatggggcagatcgaggtgct 59488
>ref|NM_187575.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 960
Score = 77.8 bits (39), Expect = 1e-011
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtg 397
||||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| |||||| |
Sbjct: 310 tgcccaggcgtcgtctcctgcgccgacgtcctcgcctacgccgccagggacggcgtcgcg 369
Query: 398 ctctccggtggcctcggctaccaggtgccgggcgg 432
||| |||| |||| | ||||| | || ||||||||
Sbjct: 370 ctcaccgggggcccccgctacgacgtcccgggcgg 404
Score = 65.9 bits (33), Expect = 5e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 177 tccgcatgcacttccatgactgctttgtcaggggctgcgatggctcggtgctg 229
|||||||||||||||| |||||||| |||||||| ||||| || |||||||||
Sbjct: 149 tccgcatgcacttccacgactgcttcgtcagggggtgcgacgggtcggtgctg 201
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 938 aagatggggcagatcgaggtgct 960
|||||||||||||||||||||||
Sbjct: 889 aagatggggcagatcgaggtgct 911
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 77.8 bits (39), Expect = 1e-011
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 338 tgccccggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtg 397
||||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| |||||| |
Sbjct: 1171131 tgcccaggcgtcgtctcctgcgccgacgtcctcgcctacgccgccagggacggcgtcgcg 1171072
Query: 398 ctctccggtggcctcggctaccaggtgccgggcgg 432
||| |||| |||| | ||||| | || ||||||||
Sbjct: 1171071 ctcaccgggggcccccgctacgacgtcccgggcgg 1171037
Score = 65.9 bits (33), Expect = 5e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 347 gtggtctcctgcgccgacgtgctcgccttcgcggccagggacagcgtcgtgct 399
|||||||||||||| ||| | ||||||||||| ||||| ||||||||||||||
Sbjct: 1159303 gtggtctcctgcgcggacatactcgccttcgccgccagagacagcgtcgtgct 1159251
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 563 tcgggcgcgcacaccatcggcgtctcgcactgcagc 598
||||||||||||||||||||||| ||||||||||||
Sbjct: 1152696 tcgggcgcgcacaccatcggcgtgtcgcactgcagc 1152661
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 343 cggcgtggtctcctgcgccgacgtgctcgccttcgcggccagggac 388
|||||| ||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 1154741 cggcgtcgtctcctgcgccgacgtcctcgccttcgccgcccgggac 1154696
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 177 tccgcatgcacttccatgactgctttgtcaggg 209
|||||||||||||||| |||||||| |||||||
Sbjct: 1171363 tccgcatgcacttccacgactgcttcgtcaggg 1171331
Score = 46.1 bits (23), Expect = 0.049
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 938 aagatggggcagatcgaggtgct 960
|||||||||||||||||||||||
Sbjct: 1170552 aagatggggcagatcgaggtgct 1170530
Score = 44.1 bits (22), Expect = 0.19
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 177 tccgcatgcacttccatgactgctttgtca 206
|||| |||||||||||||||||||| ||||
Sbjct: 1159585 tccggatgcacttccatgactgcttcgtca 1159556
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,818,557
Number of Sequences: 438736
Number of extensions: 1818557
Number of successful extensions: 17258
Number of sequences better than 0.5: 513
Number of HSP's better than 0.5 without gapping: 567
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12175
Number of HSP's gapped (non-prelim): 5030
length of query: 1326
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1305
effective length of database: 2,791,206,460
effective search space: 3642524430300
effective search space used: 3642524430300
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)