BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5705822.3.1
(888 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA... 948 0.0
dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA... 940 0.0
gb|CB647699.1|CB647699 OSJNEb10L19.f OSJNEb Oryza sativa (j... 745 0.0
dbj|AK120149.1| Oryza sativa (japonica cultivar-group) cDNA... 710 0.0
gb|CB638486.1|CB638486 OSJNEa06N09.f OSJNEa Oryza sativa (j... 216 2e-053
gb|CB638536.1|CB638536 OSJNEa06O19.f OSJNEa Oryza sativa (j... 216 2e-053
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 172 2e-040
gb|AACV01023263.1| Oryza sativa (japonica cultivar-group) c... 172 2e-040
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 172 2e-040
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 172 2e-040
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 172 2e-040
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 172 2e-040
gb|CB640178.1|CB640178 OSJNEa13J16.f OSJNEa Oryza sativa (j... 151 8e-034
gb|AU101087.1|AU101087 AU101087 Rice panicle at flowering s... 84 1e-013
gb|CB637303.1|CB637303 OSJNEa03L23.f OSJNEa Oryza sativa (j... 84 1e-013
gb|CB638800.1|CB638800 OSJNEa07J06.f OSJNEa Oryza sativa (j... 84 1e-013
gb|CB639941.1|CB639941 OSJNEa12J13.f OSJNEa Oryza sativa (j... 84 1e-013
gb|CB640123.1|CB640123 OSJNEa13F14.f OSJNEa Oryza sativa (j... 84 1e-013
gb|CB649925.1|CB649925 OSJNEb14C02.f OSJNEb Oryza sativa (j... 84 1e-013
dbj|AK069822.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
ref|NM_194797.1| Oryza sativa (japonica cultivar-group) put... 84 1e-013
gb|AACV01020792.1| Oryza sativa (japonica cultivar-group) c... 78 9e-012
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 78 9e-012
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 78 9e-012
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 78 9e-012
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 78 9e-012
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 78 9e-012
gb|AC135568.3| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|AACV01023269.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
dbj|AK102583.1| Oryza sativa (japonica cultivar-group) cDNA... 62 5e-007
gb|CB636559.1|CB636559 OSJNEa02D04.f OSJNEa Oryza sativa (j... 54 1e-004
gb|CB674032.1|CB674032 OSJNEe08O06.f OSJNEe Oryza sativa (j... 54 1e-004
gb|CB636648.1|CB636648 OSJNEa02G05.f OSJNEa Oryza sativa (j... 48 0.008
gb|AQ859298.1|AQ859298 nbeb0012G11f CUGI Rice BAC Library (... 46 0.032
gb|CB647849.1|CB647849 OSJNEb10P11.f OSJNEb Oryza sativa (j... 46 0.032
gb|CF303562.1|CF303562 ABF1--02-J20.g1 ABF3-overexpressing ... 46 0.032
gb|CF304934.1|CF304934 ABF1--06-F09.g1 ABF3-overexpressing ... 46 0.032
gb|AC130601.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
gb|AACV01012537.1| Oryza sativa (japonica cultivar-group) c... 44 0.13
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 44 0.13
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.13
>dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020C01, full
insert sequence
Length = 3367
Score = 948 bits (478), Expect = 0.0
Identities = 772/870 (88%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 232 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 291
Query: 61 agggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgaga 120
||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| ||||
Sbjct: 292 agggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgaga 351
Query: 121 accgaaagttcatctatgttgagcaggcattcttccaaagatggtggaggaaccagaatg 180
|||| |||||| ||||||||||||||||||||||||| ||||||||||| | |||| |
Sbjct: 352 accgcaagttcgtctatgttgagcaggcattcttccagagatggtggagacagcagagcg 411
Query: 181 acatgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaataaatg 240
||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||| |
Sbjct: 412 acatgattaaggatatagtgaaggggctcatcagcactggacgattggaattaataaacg 471
Query: 241 gtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagacta 300
| || ||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||
Sbjct: 472 ggggaatgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagacta 531
Query: 301 cacttggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcaga 360
| || || |||| || |||||||||||||||||| ||||| ||| ||||||| |||||||
Sbjct: 532 cgctcgggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcaga 591
Query: 361 ttgatccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagtaggattcg 420
||||||||||||||||||| || |||||||||||||| || ||| |||||||||||||||
Sbjct: 592 ttgatccgtttgggcactccgcagttcaggcttacctcctaggcacagaagtaggattcg 651
Query: 421 atgctttctatttcttccggattgattaccaagaccgtgatacacggaaaggaacaaaag 480
||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 652 atgctttttattttttccggattgattaccaagaccgtgacacacggaagggaacaaaag 711
Query: 481 aactcgaggttgtatggaggggctccaagaccttgggctcatcggctgatatctttgctg 540
| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 712 agctcgaggttgtgtggaggggctccaagaccttcggctcatcagctgacatctttgctg 771
Query: 541 gcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagttgatgata 600
||||||| |||||||| |||||||||||||||||| | ||||| || |||||||||||||
Sbjct: 772 gcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaagttgatgata 831
Query: 601 attcccctgttgtccaggatgatccccttcttttcgattataatgttgaagaacgagtaa 660
|||||| | ||||||||||||||||||||||| ||||||||||| || |||| ||
Sbjct: 832 cttccccaatcgtccaggatgatccccttctttttgattataatgtggagcaacgggtgg 891
Query: 661 atgattttgttgctgcagctgtagcacaggcaaatatcacgaggacaaatcatatcatgt 720
|||| ||||||||||||||| |||||||||||||||| || ||||||||||| | ||||
Sbjct: 892 atgactttgttgctgcagctatagcacaggcaaatattacaaggacaaatcacgttatgt 951
Query: 721 ttacaatgggaacagacttcaaataccaatacgcagagagttggttcggaaatatggaca 780
|||||||||| |||||||||||||| ||||| ||||| ||||||||| || | |||||||
Sbjct: 952 ttacaatgggcacagacttcaaatatcaatatgcagaaagttggttcagacagatggaca 1011
Query: 781 aactaattcactatgtgaacaaggatggccgtatccatgctctttattccacaccttcca 840
|| |||||||||| || || |||||||||||| || ||||||| |||||||||||||| |
Sbjct: 1012 aattaattcactacgttaataaggatggccgtgtcaatgctctgtattccacaccttcga 1071
Query: 841 tttataccgatgcaaaatatgctgcaaatg 870
||||||| ||||||||| |||||| |||||
Sbjct: 1072 tttatactgatgcaaaacatgctgaaaatg 1101
>dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H23, full
insert sequence
Length = 3413
Score = 940 bits (474), Expect = 0.0
Identities = 771/870 (88%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 337
Query: 61 agggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgaga 120
||||||| ||||||||||| ||||||||||||||| | || || || |||||||| ||||
Sbjct: 338 agggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcactgctcaaggatgaga 397
Query: 121 accgaaagttcatctatgttgagcaggcattcttccaaagatggtggaggaaccagaatg 180
|||| |||||| ||||||||||||||||||||||||| ||||||||||| | |||| |
Sbjct: 398 accgcaagttcgtctatgttgagcaggcattcttccagagatggtggagacagcagagcg 457
Query: 181 acatgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaataaatg 240
||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||| |
Sbjct: 458 acatgattaaggatatagtgaaggggctcatcagcactggacgattggaattaataaacg 517
Query: 241 gtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagacta 300
| || ||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||
Sbjct: 518 ggggaatgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagacta 577
Query: 301 cacttggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcaga 360
| || || |||| || |||||||||||||||||| ||||| ||| ||||||| |||||||
Sbjct: 578 cgctcgggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcaga 637
Query: 361 ttgatccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagtaggattcg 420
||||||||||||||||||| || |||||||||||||| || ||| |||||||||||||||
Sbjct: 638 ttgatccgtttgggcactccgcagttcaggcttacctcctaggcacagaagtaggattcg 697
Query: 421 atgctttctatttcttccggattgattaccaagaccgtgatacacggaaaggaacaaaag 480
||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 698 atgctttttattttttccggattgattaccaagaccgtgacacacggaagggaacaaaag 757
Query: 481 aactcgaggttgtatggaggggctccaagaccttgggctcatcggctgatatctttgctg 540
| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 758 agctcgaggttgtgtggaggggctccaagaccttcggctcatcagctgacatctttgctg 817
Query: 541 gcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagttgatgata 600
||||||| |||||||| |||||||||||||||||| | ||||| || |||||||||||||
Sbjct: 818 gcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaagttgatgata 877
Query: 601 attcccctgttgtccaggatgatccccttcttttcgattataatgttgaagaacgagtaa 660
|||||| | ||||||||||||||||||||||| ||||||||||| || |||| ||
Sbjct: 878 cttccccaatcgtccaggatgatccccttctttttgattataatgtggagcaacgggtgg 937
Query: 661 atgattttgttgctgcagctgtagcacaggcaaatatcacgaggacaaatcatatcatgt 720
|||| ||||||||||||||| |||||||||||||||| || ||||||||||| | ||||
Sbjct: 938 atgactttgttgctgcagctatagcacaggcaaatattacaaggacaaatcacgttatgt 997
Query: 721 ttacaatgggaacagacttcaaataccaatacgcagagagttggttcggaaatatggaca 780
|||||||||| |||||||||||||| ||||| ||||| ||||||||| || | |||||||
Sbjct: 998 ttacaatgggcacagacttcaaatatcaatatgcagaaagttggttcagacagatggaca 1057
Query: 781 aactaattcactatgtgaacaaggatggccgtatccatgctctttattccacaccttcca 840
|| |||||||||| || || |||||||||||| || ||||||| |||||||||||||| |
Sbjct: 1058 aattaattcactacgttaataaggatggccgtgtcaatgctctgtattccacaccttcga 1117
Query: 841 tttataccgatgcaaaatatgctgcaaatg 870
||||||| ||||||||| |||||| |||||
Sbjct: 1118 tttatactgatgcaaaacatgctgaaaatg 1147
>gb|CB647699.1|CB647699 OSJNEb10L19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10L19 5', mRNA sequence
Length = 863
Score = 745 bits (376), Expect = 0.0
Identities = 577/644 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 220 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 279
Query: 61 agggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgaga 120
||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| ||||
Sbjct: 280 agggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgaga 339
Query: 121 accgaaagttcatctatgttgagcaggcattcttccaaagatggtggaggaaccagaatg 180
|||| |||||| ||||||||||||||||||||||||| ||||||||||| | |||| |
Sbjct: 340 accgcaagttcgtctatgttgagcaggcattcttccagagatggtggagacagcagagcg 399
Query: 181 acatgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaataaatg 240
||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||| |
Sbjct: 400 acatgattaaggatatagtgaaggggctcatcagcactggacgattggaattaataaacg 459
Query: 241 gtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagacta 300
| || ||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||
Sbjct: 460 ggggaatgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagacta 519
Query: 301 cacttggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcaga 360
| || || |||| || |||||||||||||||||| ||||| ||| ||||||| |||||||
Sbjct: 520 cgctcgggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcaga 579
Query: 361 ttgatccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagtaggattcg 420
||||||||||||||||||| || |||||||||||||| || ||| |||||||||||||||
Sbjct: 580 ttgatccgtttgggcactccgcagttcaggcttacctcctaggcacagaagtaggattcg 639
Query: 421 atgctttctatttcttccggattgattaccaagaccgtgatacacggaaaggaacaaaag 480
||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 640 atgctttttattttttccggattgattaccaagaccgtgacacacggaagggaacaaaag 699
Query: 481 aactcgaggttgtatggaggggctccaagaccttgggctcatcggctgatatctttgctg 540
| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 700 agctcgaggttgtgtggaggggctccaagaccttcggctcatcagctgacatctttgctg 759
Query: 541 gcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagttgatgata 600
||||||| |||||||| |||||||||||||||||| | ||||| || |||||||||||||
Sbjct: 760 gcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaagttgatgata 819
Query: 601 attcccctgttgtccaggatgatccccttcttttcgattataat 644
|||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 820 cttccccaatcgtccaggatgatccccttctttttgattataat 863
>dbj|AK120149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029J19, full
insert sequence
Length = 2926
Score = 710 bits (358), Expect = 0.0
Identities = 595/674 (88%)
Strand = Plus / Plus
Query: 197 agtgaaggggctcatcagctctggacggctggaattaataaatggtggcatgtgcatgca 256
||||||||||||||||||| ||||||| ||||||||||||| || || |||||||||||
Sbjct: 3 agtgaaggggctcatcagcactggacgattggaattaataaacgggggaatgtgcatgca 62
Query: 257 cgatgaggcggctgtacactatattgacatgatcgatcagactacacttggacacaagta 316
||||| ||| | || ||||| ||||||||||| || |||||||| || || |||| ||
Sbjct: 63 tgatgaagcgaccgtgcactacattgacatgatagaccagactacgctcgggcacaggtt 122
Query: 317 catcaaggaggagtttggccagatcccacggattggctggcagattgatccgtttgggca 376
|||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 123 catcaaggaggagtttggtcagattccaaggattggttggcagattgatccgtttgggca 182
Query: 377 ctctgcggttcaggcttaccttcttggcgcagaagtaggattcgatgctttctatttctt 436
||| || |||||||||||||| || ||| |||||||||||||||||||||| ||||| ||
Sbjct: 183 ctccgcagttcaggcttacctcctaggcacagaagtaggattcgatgctttttatttttt 242
Query: 437 ccggattgattaccaagaccgtgatacacggaaaggaacaaaagaactcgaggttgtatg 496
|||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||
Sbjct: 243 ccggattgattaccaagaccgtgacacacggaagggaacaaaagagctcgaggttgtgtg 302
Query: 497 gaggggctccaagaccttgggctcatcggctgatatctttgctggcatctttccaaaaaa 556
|||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 303 gaggggctccaagaccttcggctcatcagctgacatctttgctggcatcttcccaaaaaa 362
Query: 557 ctatgaaccacctcctggtgatttttattttgaagttgatgataattcccctgttgtcca 616
|||||||||||||||||| | ||||| || ||||||||||||| |||||| | |||||
Sbjct: 363 ttatgaaccacctcctggtcagttttacttcgaagttgatgatacttccccaatcgtcca 422
Query: 617 ggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgctgc 676
|||||||||||||||||| ||||||||||| || |||| || |||| |||||||||||
Sbjct: 423 ggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgctgc 482
Query: 677 agctgtagcacaggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacaga 736
|||| |||||||||||||||| || ||||||||||| | |||||||||||||| |||||
Sbjct: 483 agctatagcacaggcaaatattacaaggacaaatcacgttatgtttacaatgggcacaga 542
Query: 737 cttcaaataccaatacgcagagagttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||||| ||||| ||||||||| || | ||||||||| |||||||||| ||
Sbjct: 543 cttcaaatatcaatatgcagaaagttggttcagacagatggacaaattaattcactacgt 602
Query: 797 gaacaaggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaa 856
|| |||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 603 taataaggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaa 662
Query: 857 atatgctgcaaatg 870
| |||||| |||||
Sbjct: 663 acatgctgaaaatg 676
>gb|CB638486.1|CB638486 OSJNEa06N09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06N09 5', mRNA sequence
Length = 607
Score = 216 bits (109), Expect = 2e-053
Identities = 181/205 (88%)
Strand = Plus / Plus
Query: 666 tttgttgctgcagctgtagcacaggcaaatatcacgaggacaaatcatatcatgtttaca 725
||||||||||||||| |||||||||||||||| || ||||||||||| | |||||||||
Sbjct: 2 tttgttgctgcagctatagcacaggcaaatattacaaggacaaatcacgttatgtttaca 61
Query: 726 atgggaacagacttcaaataccaatacgcagagagttggttcggaaatatggacaaacta 785
||||| |||||||||||||| ||||| ||||| ||||||||| || | ||||||||| ||
Sbjct: 62 atgggcacagacttcaaatatcaatatgcagaaagttggttcagacagatggacaaatta 121
Query: 786 attcactatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttat 845
|||||||| || || |||||||||||| || ||||||| |||||||||||||| ||||||
Sbjct: 122 attcactacgttaataaggatggccgtgtcaatgctctgtattccacaccttcgatttat 181
Query: 846 accgatgcaaaatatgctgcaaatg 870
|| ||||||||| |||||| |||||
Sbjct: 182 actgatgcaaaacatgctgaaaatg 206
>gb|CB638536.1|CB638536 OSJNEa06O19.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa06O19 5', mRNA sequence
Length = 627
Score = 216 bits (109), Expect = 2e-053
Identities = 181/205 (88%)
Strand = Plus / Plus
Query: 666 tttgttgctgcagctgtagcacaggcaaatatcacgaggacaaatcatatcatgtttaca 725
||||||||||||||| |||||||||||||||| || ||||||||||| | |||||||||
Sbjct: 2 tttgttgctgcagctatagcacaggcaaatattacaaggacaaatcacgttatgtttaca 61
Query: 726 atgggaacagacttcaaataccaatacgcagagagttggttcggaaatatggacaaacta 785
||||| |||||||||||||| ||||| ||||| ||||||||| || | ||||||||| ||
Sbjct: 62 atgggcacagacttcaaatatcaatatgcagaaagttggttcagacagatggacaaatta 121
Query: 786 attcactatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttat 845
|||||||| || || |||||||||||| || ||||||| |||||||||||||| ||||||
Sbjct: 122 attcactacgttaataaggatggccgtgtcaatgctctgtattccacaccttcgatttat 181
Query: 846 accgatgcaaaatatgctgcaaatg 870
|| ||||||||| |||||| |||||
Sbjct: 182 actgatgcaaaacatgctgaaaatg 206
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10,
complete sequence
Length = 158833
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 129735 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 129794
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 129795 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 129853
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Plus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 129264 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 129323
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 129324 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 129383
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 129384 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 129431
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 128138 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 128197
Query: 61 agg 63
|||
Sbjct: 128198 agg 128200
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 130529 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 130588
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 130589 aatatgcagaaagttggttcagacagatggacaaattaattcacta 130634
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 128426 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 128485
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 128486 aaccgcaagttcgtctatgttgagcagg 128513
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 129956 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 130015
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 130016 gttgatgatacttcccc 130032
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 129072 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 129131
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 129132 ggctcatcagcactggacgattggaattaat 129162
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 130750 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 130809
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 130810 ctgaaaatg 130818
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 130117 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 130176
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 130177 gcagctatagcacagg 130192
>gb|AACV01023263.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023263, whole
genome shotgun sequence
Length = 27698
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Minus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 22546 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 22487
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 22486 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 22428
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Minus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 23017 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 22958
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 22957 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 22898
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 22897 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 22850
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 24143 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 24084
Query: 61 agg 63
|||
Sbjct: 24083 agg 24081
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 21752 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 21693
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 21692 aatatgcagaaagttggttcagacagatggacaaattaattcacta 21647
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 23855 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 23796
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 23795 aaccgcaagttcgtctatgttgagcagg 23768
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 22325 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 22266
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 22265 gttgatgatacttcccc 22249
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 23209 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 23150
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 23149 ggctcatcagcactggacgattggaattaat 23119
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 21531 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 21472
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 21471 ctgaaaatg 21463
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 22164 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 22105
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 22104 gcagctatagcacagg 22089
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1095314 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 1095373
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 1095374 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 1095432
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Plus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 1094843 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 1094902
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 1094903 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 1094962
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 1094963 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 1095010
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1093717 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 1093776
Query: 61 agg 63
|||
Sbjct: 1093777 agg 1093779
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 1096108 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 1096167
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 1096168 aatatgcagaaagttggttcagacagatggacaaattaattcacta 1096213
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 1094005 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 1094064
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 1094065 aaccgcaagttcgtctatgttgagcagg 1094092
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 1095535 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 1095594
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 1095595 gttgatgatacttcccc 1095611
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 1094651 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 1094710
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 1094711 ggctcatcagcactggacgattggaattaat 1094741
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 1096329 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 1096388
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 1096389 ctgaaaatg 1096397
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 1095696 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 1095755
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 1095756 gcagctatagcacagg 1095771
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 1160373 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 1160314
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 1160313 tgatgataatt 1160303
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 1160578 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 1160520
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 1160519 gagaggggctccaagac 1160503
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 1161441 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 1161388
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 1159529 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 1159483
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 1159737 agttggttcagaatgatggacaaactaattcattatgt 1159700
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 15260296 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 15260355
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 15260356 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 15260414
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Plus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 15259825 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 15259884
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 15259885 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 15259944
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 15259945 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 15259992
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 15258699 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 15258758
Query: 61 agg 63
|||
Sbjct: 15258759 agg 15258761
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 15261090 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 15261149
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 15261150 aatatgcagaaagttggttcagacagatggacaaattaattcacta 15261195
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 15258987 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 15259046
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 15259047 aaccgcaagttcgtctatgttgagcagg 15259074
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 15260517 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 15260576
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 15260577 gttgatgatacttcccc 15260593
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 15259633 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 15259692
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 15259693 ggctcatcagcactggacgattggaattaat 15259723
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 15261311 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 15261370
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 15261371 ctgaaaatg 15261379
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 15260678 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 15260737
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 15260738 gcagctatagcacagg 15260753
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 15325355 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 15325296
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 15325295 tgatgataatt 15325285
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 15325560 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 15325502
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 15325501 gagaggggctccaagac 15325485
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 15326423 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 15326370
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 15324511 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 15324465
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 15324719 agttggttcagaatgatggacaaactaattcattatgt 15324682
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 18394370 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 18394429
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 18394430 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 18394488
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Plus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 18393899 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 18393958
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 18393959 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 18394018
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 18394019 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 18394066
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18392773 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 18392832
Query: 61 agg 63
|||
Sbjct: 18392833 agg 18392835
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 18395164 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 18395223
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 18395224 aatatgcagaaagttggttcagacagatggacaaattaattcacta 18395269
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 18393061 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 18393120
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 18393121 aaccgcaagttcgtctatgttgagcagg 18393148
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 18394591 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 18394650
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 18394651 gttgatgatacttcccc 18394667
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 18393707 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 18393766
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 18393767 ggctcatcagcactggacgattggaattaat 18393797
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 18395385 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 18395444
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 18395445 ctgaaaatg 18395453
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 18394752 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 18394811
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 18394812 gcagctatagcacagg 18394827
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 18458892 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 18458833
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 18458832 tgatgataatt 18458822
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 18459097 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 18459039
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 18459038 gagaggggctccaagac 18459022
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 18459960 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 18459907
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 18458048 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 18458002
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 18458256 agttggttcagaatgatggacaaactaattcattatgt 18458219
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 172 bits (87), Expect = 2e-040
Identities = 111/119 (93%)
Strand = Plus / Plus
Query: 411 gtaggattcgatgctttctatttcttccggattgattaccaagaccgtgatacacggaaa 470
||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 18553771 gtaggattcgatgctttttattttttccggattgattaccaagaccgtgacacacggaag 18553830
Query: 471 ggaacaaaagaactcgaggttgtatggaggggctccaagaccttgggctcatcggctga 529
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 18553831 ggaacaaaagagctcgaggttgtgtggaggggctccaagaccttcggctcatcagctga 18553889
Score = 159 bits (80), Expect = 3e-036
Identities = 146/168 (86%)
Strand = Plus / Plus
Query: 246 atgtgcatgcacgatgaggcggctgtacactatattgacatgatcgatcagactacactt 305
||||||||||| ||||| ||| | || ||||| ||||||||||| || |||||||| ||
Sbjct: 18553300 atgtgcatgcatgatgaagcgaccgtgcactacattgacatgatagaccagactacgctc 18553359
Query: 306 ggacacaagtacatcaaggaggagtttggccagatcccacggattggctggcagattgat 365
|| |||| || |||||||||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct: 18553360 gggcacaggttcatcaaggaggagtttggtcagattccaaggattggttggcagattgat 18553419
Query: 366 ccgtttgggcactctgcggttcaggcttaccttcttggcgcagaagta 413
|||||||||||||| || |||||||||||||| || ||| ||||||||
Sbjct: 18553420 ccgtttgggcactccgcagttcaggcttacctcctaggcacagaagta 18553467
Score = 109 bits (55), Expect = 3e-021
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18552174 acgacgtcgggtggctcaagaccgtcgaccagtactacgtcggatccaacaactccatcc 18552233
Query: 61 agg 63
|||
Sbjct: 18552234 agg 18552236
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 688 aggcaaatatcacgaggacaaatcatatcatgtttacaatgggaacagacttcaaatacc 747
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||||| |
Sbjct: 18554565 aggcaaatattacaaggacaaatcacgttatgtttacaatgggcacagacttcaaatatc 18554624
Query: 748 aatacgcagagagttggttcggaaatatggacaaactaattcacta 793
|||| ||||| ||||||||| || | ||||||||| ||||||||||
Sbjct: 18554625 aatatgcagaaagttggttcagacagatggacaaattaattcacta 18554670
Score = 103 bits (52), Expect = 2e-019
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 60 cagggggcatgcgtgcagaacgtgctggattcgctcatcccggcgcttctcaaggacgag 119
|||||||| ||||||||||| ||||||||||||||| | || ||||| |||||||| |||
Sbjct: 18552462 cagggggcgtgcgtgcagaatgtgctggattcgctcgtgccagcgctgctcaaggatgag 18552521
Query: 120 aaccgaaagttcatctatgttgagcagg 147
||||| |||||| |||||||||||||||
Sbjct: 18552522 aaccgcaagttcgtctatgttgagcagg 18552549
Score = 97.6 bits (49), Expect = 1e-017
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 531 atctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaa 590
||||||||||||||||| |||||||| |||||||||||||||||| | ||||| || |||
Sbjct: 18553992 atctttgctggcatcttcccaaaaaattatgaaccacctcctggtcagttttacttcgaa 18554051
Query: 591 gttgatgataattcccc 607
|||||||||| ||||||
Sbjct: 18554052 gttgatgatacttcccc 18554068
Score = 93.7 bits (47), Expect = 2e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 145 aggcattcttccaaagatggtggaggaaccagaatgacatgatcaaggatacagtgaagg 204
||||||||||||| ||||||||||| | |||| |||||||| ||||||| ||||||||
Sbjct: 18553108 aggcattcttccagagatggtggagacagcagagcgacatgattaaggatatagtgaagg 18553167
Query: 205 ggctcatcagctctggacggctggaattaat 235
||||||||||| ||||||| ||||||||||
Sbjct: 18553168 ggctcatcagcactggacgattggaattaat 18553198
Score = 81.8 bits (41), Expect = 6e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 802 aggatggccgtatccatgctctttattccacaccttccatttataccgatgcaaaatatg 861
||||||||||| || ||||||| |||||||||||||| |||||||| ||||||||| |||
Sbjct: 18554786 aggatggccgtgtcaatgctctgtattccacaccttcgatttatactgatgcaaaacatg 18554845
Query: 862 ctgcaaatg 870
||| |||||
Sbjct: 18554846 ctgaaaatg 18554854
Score = 79.8 bits (40), Expect = 2e-012
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 615 caggatgatccccttcttttcgattataatgttgaagaacgagtaaatgattttgttgct 674
|||||||||||||||||||| ||||||||||| || |||| || |||| |||||||||
Sbjct: 18554153 caggatgatccccttctttttgattataatgtggagcaacgggtggatgactttgttgct 18554212
Query: 675 gcagctgtagcacagg 690
|||||| |||||||||
Sbjct: 18554213 gcagctatagcacagg 18554228
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 18618293 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 18618234
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 18618233 tgatgataatt 18618223
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 18618498 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 18618440
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 18618439 gagaggggctccaagac 18618423
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 18619361 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 18619308
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 18617449 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 18617403
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 18617657 agttggttcagaatgatggacaaactaattcattatgt 18617620
>gb|CB640178.1|CB640178 OSJNEa13J16.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13J16 5', mRNA sequence
Length = 333
Score = 151 bits (76), Expect = 8e-034
Identities = 130/148 (87%)
Strand = Plus / Plus
Query: 723 acaatgggaacagacttcaaataccaatacgcagagagttggttcggaaatatggacaaa 782
|||||||| |||||||||||||| ||||| ||||| ||||||||| || | |||||||||
Sbjct: 1 acaatgggcacagacttcaaatatcaatatgcagaaagttggttcagacagatggacaaa 60
Query: 783 ctaattcactatgtgaacaaggatggccgtatccatgctctttattccacaccttccatt 842
|||||||||| || || |||||||||||| || ||||||| |||||||||||||| |||
Sbjct: 61 ttaattcactacgttaataaggatggccgtgtcaatgctctgtattccacaccttcgatt 120
Query: 843 tataccgatgcaaaatatgctgcaaatg 870
||||| ||||||||| |||||| |||||
Sbjct: 121 tatactgatgcaaaacatgctgaaaatg 148
>gb|AU101087.1|AU101087 AU101087 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0773, mRNA sequence
Length = 418
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 291 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 350
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 351 agggcgcgtgcgtg 364
>gb|CB637303.1|CB637303 OSJNEa03L23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03L23 5', mRNA sequence
Length = 581
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 178 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 237
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 238 agggcgcgtgcgtg 251
Score = 52.0 bits (26), Expect = 5e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 234 ataaatggtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgat 293
||||||||||| ||| ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 411 ataaatggtgggtggtgtatgcatgatgaagccgccgtccattatattgacatgattgat 470
Query: 294 cagactacacttgg 307
||||| ||||||||
Sbjct: 471 cagaccacacttgg 484
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 318 gagcaggctttcttccaaagatggtgg 344
>gb|CB638800.1|CB638800 OSJNEa07J06.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa07J06 5', mRNA sequence
Length = 258
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 178 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 237
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 238 agggcgcgtgcgtg 251
>gb|CB639941.1|CB639941 OSJNEa12J13.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12J13 5', mRNA sequence
Length = 637
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 171 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 230
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 231 agggcgcgtgcgtg 244
Score = 52.0 bits (26), Expect = 5e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 234 ataaatggtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgat 293
||||||||||| ||| ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 404 ataaatggtgggtggtgtatgcatgatgaagccgccgtccattatattgacatgattgat 463
Query: 294 cagactacacttgg 307
||||| ||||||||
Sbjct: 464 cagaccacacttgg 477
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 311 gagcaggctttcttccaaagatggtgg 337
>gb|CB640123.1|CB640123 OSJNEa13F14.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13F14 5', mRNA sequence
Length = 431
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 178 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 237
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 238 agggcgcgtgcgtg 251
>gb|CB649925.1|CB649925 OSJNEb14C02.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14C02 5', mRNA sequence
Length = 806
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 199 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 258
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 259 agggcgcgtgcgtg 272
Score = 52.0 bits (26), Expect = 5e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 234 ataaatggtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgat 293
||||||||||| ||| ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 432 ataaatggtgggtggtgtatgcatgatgaagccgccgtccattatattgacatgattgat 491
Query: 294 cagactacacttgg 307
||||| ||||||||
Sbjct: 492 cagaccacacttgg 505
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 339 gagcaggctttcttccaaagatggtgg 365
>dbj|AK069822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027F12, full
insert sequence
Length = 3416
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 375 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 434
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 435 agggcgcgtgcgtg 448
Score = 52.0 bits (26), Expect = 5e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 234 ataaatggtggcatgtgcatgcacgatgaggcggctgtacactatattgacatgatcgat 293
||||||||||| ||| ||||| ||||| || || || || |||||||||||||| |||
Sbjct: 608 ataaatggtgggtggtgtatgcatgatgaagccgccgtccattatattgacatgattgat 667
Query: 294 cagactacacttgg 307
||||| ||||||||
Sbjct: 668 cagaccacacttgg 681
Score = 46.1 bits (23), Expect = 0.032
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 792 tatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttataccgat 851
||||||||||||||||||||| | ||||| || || || || || || ||||| || |||
Sbjct: 1163 tatgtgaacaaggatggccgtgtgcatgcactgtactctactccatctatttacacagat 1222
Query: 852 gcaaaatatgc 862
|||||| ||||
Sbjct: 1223 gcaaaacatgc 1233
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 1020 aagaacgtgtgaatgattttgttgctgcagc 1050
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 515 gagcaggctttcttccaaagatggtgg 541
>ref|NM_194797.1| Oryza sativa (japonica cultivar-group) putative alpha-mannosidase
(OSJNBa0029P06.15), mRNA
Length = 1923
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 143 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 202
Query: 61 agggggcatgcgtg 74
|||| || ||||||
Sbjct: 203 agggcgcgtgcgtg 216
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 451 tatattgacatgattgatcagaccacacttgg 482
Score = 46.1 bits (23), Expect = 0.032
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 792 tatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttataccgat 851
||||||||||||||||||||| | ||||| || || || || || || ||||| || |||
Sbjct: 964 tatgtgaacaaggatggccgtgtgcatgcactgtactctactccatctatttacacagat 1023
Query: 852 gcaaaatatgc 862
|||||| ||||
Sbjct: 1024 gcaaaacatgc 1034
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 821 aagaacgtgtgaatgattttgttgctgcagc 851
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 283 gagcaggctttcttccaaagatggtgg 309
>gb|AACV01020792.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg020792, whole
genome shotgun sequence
Length = 23825
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 6981 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 7040
Query: 61 agg 63
|||
Sbjct: 7041 agg 7043
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 9708 tatattgacatgattgatcagaccacacttgg 9739
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 10592 aagaacgtgtgaatgattttgttgctgcagc 10622
>ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4008077
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 2461597 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 2461656
Query: 61 agg 63
|||
Sbjct: 2461657 agg 2461659
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 2464324 tatattgacatgattgatcagaccacacttgg 2464355
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 2465208 aagaacgtgtgaatgattttgttgctgcagc 2465238
>gb|CH401243.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000080 genomic
scaffold, whole genome shotgun sequence
Length = 3249876
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 2549949 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 2550008
Query: 61 agg 63
|||
Sbjct: 2550009 agg 2550011
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 2552676 tatattgacatgattgatcagaccacacttgg 2552707
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 2553560 aagaacgtgtgaatgattttgttgctgcagc 2553590
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 2549949 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 2550008
Query: 61 agg 63
|||
Sbjct: 2550009 agg 2550011
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 2552676 tatattgacatgattgatcagaccacacttgg 2552707
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 2553560 aagaacgtgtgaatgattttgttgctgcagc 2553590
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 2456591 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 2456650
Query: 61 agg 63
|||
Sbjct: 2456651 agg 2456653
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 2459318 tatattgacatgattgatcagaccacacttgg 2459349
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 2460202 aagaacgtgtgaatgattttgttgctgcagc 2460232
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 77.8 bits (39), Expect = 9e-012
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 acgacgtcggatggctcaagaccgtagaccagtactacgtcggatccaacaactccatcc 60
|||||||||| |||||||||||| | |||||||||| |||||| |||||||||||||||
Sbjct: 2456542 acgacgtcgggtggctcaagaccatcgaccagtacttcgtcggcaccaacaactccatcc 2456601
Query: 61 agg 63
|||
Sbjct: 2456602 agg 2456604
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 2459269 tatattgacatgattgatcagaccacacttgg 2459300
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 2460153 aagaacgtgtgaatgattttgttgctgcagc 2460183
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0078F08, complete sequence
Length = 165440
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 38207 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 38148
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 38147 tgatgataatt 38137
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 38412 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 38354
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 38353 gagaggggctccaagac 38337
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 39275 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 39222
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 37363 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 37317
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 37571 agttggttcagaatgatggacaaactaattcattatgt 37534
>gb|AACV01023269.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023269, whole
genome shotgun sequence
Length = 30405
Score = 69.9 bits (35), Expect = 2e-009
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 533 ctttgctggcatctttccaaaaaactatgaaccacctcctggtgatttttattttgaagt 592
|||||||| ||||| ||||||| ||||||||| ||||| |||| |||||||| |||||
Sbjct: 13559 ctttgctgatatcttcccaaaaatttatgaaccatctcctagtgagttttatttcgaagt 13618
Query: 593 tgatgataatt 603
|||||||||||
Sbjct: 13619 tgatgataatt 13629
Score = 65.9 bits (33), Expect = 3e-008
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 436 tccggattgattaccaagaccgtgatacacggaaa-ggaacaaaagaactcgaggttgta 494
||||| ||||||||||||| ||||||| |||||| |||||| ||||||||||||||||
Sbjct: 13354 tccgggttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt- 13412
Query: 495 tggaggggctccaagac 511
|||||||||||||||
Sbjct: 13413 gagaggggctccaagac 13429
Score = 60.0 bits (30), Expect = 2e-006
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 182 catgatcaaggatacagtgaaggggctcatcagctctggacggctggaattaat 235
|||||| |||||||| ||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 12491 catgattaaggatacggtggaggggctcatcagcactggatggctggaactaat 12544
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 14403 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 14449
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 14195 agttggttcagaatgatggacaaactaattcattatgt 14232
>dbj|AK102583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098D23, full
insert sequence
Length = 2750
Score = 61.9 bits (31), Expect = 5e-007
Identities = 63/71 (88%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 442 ttgattaccaagaccgtgatacacggaaagg-aacaaaagaactcgaggttgtatggagg 500
||||||||||||| ||||||| |||||||| |||| |||||||||||||||| ||||
Sbjct: 373 ttgattaccaagatagtgatacgcggaaagggaacagaagaactcgaggttgt-gagagg 431
Query: 501 ggctccaagac 511
|||||||||||
Sbjct: 432 ggctccaagac 442
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 757 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 803
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 759 agttggttcggaaatatggacaaactaattcactatgt 796
||||||||| ||| ||||||||||||||||| |||||
Sbjct: 549 agttggttcagaatgatggacaaactaattcattatgt 586
>gb|CB636559.1|CB636559 OSJNEa02D04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02D04 5', mRNA sequence
Length = 551
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 121 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 167
>gb|CB674032.1|CB674032 OSJNEe08O06.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08O06 5', mRNA sequence
Length = 730
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 817 atgctctttattccacaccttccatttataccgatgcaaaatatgct 863
||||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 314 atgctctctattccatgtcttccatttatactgatgcaaaatatgct 360
>gb|CB636648.1|CB636648 OSJNEa02G05.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa02G05 5', mRNA sequence
Length = 630
Score = 48.1 bits (24), Expect = 0.008
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 276 tatattgacatgatcgatcagactacacttgg 307
|||||||||||||| |||||||| ||||||||
Sbjct: 195 tatattgacatgattgatcagaccacacttgg 226
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 gagcaggcattcttccaaagatggtgg 167
|||||||| ||||||||||||||||||
Sbjct: 59 gagcaggctttcttccaaagatggtgg 85
>gb|AQ859298.1|AQ859298 nbeb0012G11f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0012G11f, DNA sequence
Length = 775
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 536 aagaacgtgtgaatgattttgttgctgcagc 566
>gb|CB647849.1|CB647849 OSJNEb10P11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10P11 5', mRNA sequence
Length = 820
Score = 46.1 bits (23), Expect = 0.032
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 792 tatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttataccgat 851
||||||||||||||||||||| | ||||| || || || || || || ||||| || |||
Sbjct: 442 tatgtgaacaaggatggccgtgtgcatgcactgtactctactccatctatttacacagat 501
Query: 852 gcaaaatatgc 862
|||||| ||||
Sbjct: 502 gcaaaacatgc 512
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 299 aagaacgtgtgaatgattttgttgctgcagc 329
>gb|CF303562.1|CF303562 ABF1--02-J20.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-J20, mRNA sequence
Length = 559
Score = 46.1 bits (23), Expect = 0.032
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 792 tatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttataccgat 851
||||||||||||||||||||| | ||||| || || || || || || ||||| || |||
Sbjct: 194 tatgtgaacaaggatggccgtgtgcatgcactgtactctactccatctatttacacagat 253
Query: 852 gcaaaatatgc 862
|||||| ||||
Sbjct: 254 gcaaaacatgc 264
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 649 aagaacgagtaaatgattttgttgctgcagc 679
||||||| || ||||||||||||||||||||
Sbjct: 52 aagaacgtgtgaatgattttgttgctgcagc 82
>gb|CF304934.1|CF304934 ABF1--06-F09.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-F09, mRNA sequence
Length = 536
Score = 46.1 bits (23), Expect = 0.032
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 792 tatgtgaacaaggatggccgtatccatgctctttattccacaccttccatttataccgat 851
||||||||||||||||||||| | ||||| || || || || || || ||||| || |||
Sbjct: 47 tatgtgaacaaggatggccgtgtgcatgcactgtactctactccatctatttacacagat 106
Query: 852 gcaaaatatgc 862
|||||| ||||
Sbjct: 107 gcaaaacatgc 117
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0108E17, complete sequence
Length = 139829
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 51173 tgatttttattttgaagttgat 51194
>gb|AACV01012537.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012537, whole
genome shotgun sequence
Length = 11630
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 5447 tgatttttattttgaagttgat 5426
>ref|NT_107217.1| Oryza sativa (japonica cultivar-group)
Length = 898765
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 51173 tgatttttattttgaagttgat 51194
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 7430017 tgatttttattttgaagttgat 7430038
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 24730330 tgatttttattttgaagttgat 24730351
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 44.1 bits (22), Expect = 0.13
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 575 tgatttttattttgaagttgat 596
||||||||||||||||||||||
Sbjct: 24982320 tgatttttattttgaagttgat 24982341
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,366,907
Number of Sequences: 438736
Number of extensions: 1366907
Number of successful extensions: 7301
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7001
Number of HSP's gapped (non-prelim): 286
length of query: 888
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 867
effective length of database: 2,791,206,460
effective search space: 2419976000820
effective search space used: 2419976000820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)