BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580138.2.1
(1484 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK067049.1| Oryza sativa (japonica cultivar-group) cDNA... 991 0.0
dbj|AK068345.1| Oryza sativa (japonica cultivar-group) cDNA... 991 0.0
dbj|AK100038.1| Oryza sativa (japonica cultivar-group) cDNA... 991 0.0
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
gb|AACV01006100.1| Oryza sativa (japonica cultivar-group) c... 991 0.0
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 991 0.0
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 991 0.0
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
dbj|AK102276.1| Oryza sativa (japonica cultivar-group) cDNA... 904 0.0
dbj|AP007224.2| Oryza sativa (japonica cultivar-group) geno... 904 0.0
dbj|AP005896.3| Oryza sativa (japonica cultivar-group) geno... 904 0.0
gb|AACV01003378.1| Oryza sativa (japonica cultivar-group) c... 904 0.0
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 904 0.0
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 904 0.0
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 904 0.0
dbj|AK071490.1| Oryza sativa (japonica cultivar-group) cDNA... 896 0.0
dbj|AP004099.1| Oryza sativa (japonica cultivar-group) chro... 761 0.0
gb|CB649808.1|CB649808 OSJNEb13P08.f OSJNEb Oryza sativa (j... 605 e-170
gb|CB648867.1|CB648867 OSJNEb12H18.f OSJNEb Oryza sativa (j... 515 e-143
gb|CL518224.1|CL518224 SAE5C02 Flanking Sequence Tag of Ory... 385 e-104
gb|AU030800.1|AU030800 AU030800 Rice cDNA from immature lea... 361 7e-097
gb|CB648868.1|CB648868 OSJNEb12H18.r OSJNEb Oryza sativa (j... 337 1e-089
gb|C72535.1|C72535 C72535 Rice panicle at flowering stage O... 325 4e-086
gb|CB649809.1|CB649809 OSJNEb13P08.r OSJNEb Oryza sativa (j... 321 6e-085
gb|AU223367.1|AU223367 AU223367 Rice shoot Oryza sativa (ja... 280 2e-072
gb|AU095149.1|AU095149 AU095149 Rice cDNA from immature lea... 224 1e-055
gb|D24744.1|D24744 RICR2479A Rice root Oryza sativa (japoni... 208 6e-051
gb|AU093990.1|AU093990 AU093990 Rice panicle at flowering s... 190 1e-045
gb|C71688.1|C71688 C71688 Rice panicle at flowering stage O... 125 7e-026
gb|AU223368.1|AU223368 AU223368 Rice shoot Oryza sativa (ja... 68 1e-008
gb|CV731112.1|CV731112 FLO--04-P20.g1 Rice flower lambda ph... 54 2e-004
gb|AU031903.1|AU031903 AU031903 Rice root Oryza sativa (jap... 52 9e-004
gb|AACV01018557.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
>dbj|AK067049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092A05, full
insert sequence
Length = 2159
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1687 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 1628
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1627 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 1568
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1567 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1508
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1507 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 1448
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 1447 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 1388
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 1387 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 1328
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 1327 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 1268
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 1267 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 1208
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1207 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 1148
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1147 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 1088
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 1087 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 1028
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 1027 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 968
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 967 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 908
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 907 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 848
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 847 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 788
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 787 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 728
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 727 ttgcagaagaatgttcaacgtgttactccatgctccagtt 688
>dbj|AK068345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151N10, full
insert sequence
Length = 1837
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1579 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 1520
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1519 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 1460
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1459 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1400
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1399 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 1340
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 1339 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 1280
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 1279 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 1220
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 1219 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 1160
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 1159 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 1100
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1099 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 1040
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1039 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 980
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 979 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 920
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 919 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 860
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 859 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 800
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 799 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 740
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 739 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 680
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 679 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 620
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 619 ttgcagaagaatgttcaacgtgttactccatgctccagtt 580
>dbj|AK100038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151D12, full
insert sequence
Length = 1721
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1257 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 1198
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1197 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 1138
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1137 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1078
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1077 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 1018
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 1017 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 958
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 957 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 898
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 897 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 838
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 837 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 778
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 777 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 718
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 717 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 658
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 657 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 598
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 597 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 538
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 537 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 478
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 477 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 418
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 417 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 358
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 357 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 298
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 297 ttgcagaagaatgttcaacgtgttactccatgctccagtt 258
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
complete sequence
Length = 111961
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 40447 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 40506
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 40507 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 40566
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 40567 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 40626
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 40627 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 40686
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 40687 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 40746
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 40747 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 40806
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 40807 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 40866
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 40867 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 40926
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 40927 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 40986
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 40987 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 41046
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 41047 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 41106
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 41107 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 41166
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 41167 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 41226
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 41227 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 41286
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 41287 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 41346
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 41347 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 41406
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 41407 ttgcagaagaatgttcaacgtgttactccatgctccagtt 41446
>gb|AACV01006100.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006100, whole
genome shotgun sequence
Length = 33764
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 8732 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 8673
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 8672 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 8613
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 8612 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 8553
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 8552 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 8493
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 8492 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 8433
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 8432 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 8373
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 8372 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 8313
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 8312 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 8253
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8252 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 8193
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 8192 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 8133
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 8132 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 8073
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 8072 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 8013
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 8012 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 7953
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 7952 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 7893
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 7892 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 7833
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 7832 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 7773
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 7772 ttgcagaagaatgttcaacgtgttactccatgctccagtt 7733
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1145458 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 1145517
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 1145518 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 1145577
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1145578 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1145637
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1145638 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 1145697
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 1145698 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 1145757
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 1145758 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 1145817
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 1145818 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 1145877
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 1145878 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 1145937
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1145938 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 1145997
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1145998 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 1146057
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 1146058 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 1146117
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 1146118 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 1146177
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 1146178 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 1146237
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 1146238 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 1146297
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 1146298 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 1146357
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 1146358 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 1146417
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 1146418 ttgcagaagaatgttcaacgtgttactccatgctccagtt 1146457
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 6015637 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 6015696
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 6015697 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 6015756
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 6015757 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 6015816
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 6015817 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 6015876
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 6015877 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 6015936
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 6015937 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 6015996
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 6015997 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 6016056
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 6016057 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 6016116
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6016117 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 6016176
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 6016177 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 6016236
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 6016237 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 6016296
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 6016297 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 6016356
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 6016357 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 6016416
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 6016417 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 6016476
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 6016477 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 6016536
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 6016537 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 6016596
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 6016597 ttgcagaagaatgttcaacgtgttactccatgctccagtt 6016636
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 6207999 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 6208058
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 6208059 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 6208118
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 6208119 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 6208178
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 6208179 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 6208238
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 6208239 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 6208298
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 6208299 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 6208358
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 6208359 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 6208418
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 6208419 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 6208478
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6208479 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 6208538
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 6208539 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 6208598
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 6208599 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 6208658
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 6208659 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 6208718
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 6208719 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 6208778
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 6208779 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 6208838
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 6208839 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 6208898
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 6208899 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 6208958
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 6208959 ttgcagaagaatgttcaacgtgttactccatgctccagtt 6208998
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 5981125 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 5981184
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 5981185 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 5981244
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5981245 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 5981304
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 5981305 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 5981364
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 5981365 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 5981424
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 5981425 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 5981484
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 5981485 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 5981544
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 5981545 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 5981604
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5981605 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 5981664
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 5981665 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 5981724
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 5981725 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 5981784
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 5981785 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 5981844
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 5981845 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 5981904
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 5981905 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 5981964
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 5981965 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 5982024
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 5982025 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 5982084
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 5982085 ttgcagaagaatgttcaacgtgttactccatgctccagtt 5982124
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 991 bits (500), Expect = 0.0
Identities = 875/1000 (87%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 5981912 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 5981971
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 5981972 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 5982031
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5982032 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 5982091
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 5982092 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 5982151
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 5982152 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 5982211
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 5982212 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 5982271
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||||||| || | ||| || ||||| |||||||||||||| || |||||||| |||||
Sbjct: 5982272 ccccattagaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcac 5982331
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 5982332 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 5982391
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5982392 ggacatgcttgcaagatatgccactgcccaggtgtaagcagtcacagtgaactggttgtc 5982451
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 5982452 tgtgaaaacatagatcacacttccaccaagtatagttgaaagtgaaagccatgtcttgag 5982511
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| || |||||||| || || ||||| || ||||||||
Sbjct: 5982512 tgatggccatggttggtgaagataaagggtctctccaatggccacaaaaattggcacagc 5982571
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 5982572 tgagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 5982631
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
||||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct: 5982632 gatggagatgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaag 5982691
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 5982692 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 5982751
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 5982752 gtactgtaaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgat 5982811
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| |||||
Sbjct: 5982812 aatggagagcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttg 5982871
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 5982872 ttgcagaagaatgttcaacgtgttactccatgctccagtt 5982911
>dbj|AK102276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D19, full
insert sequence
Length = 3823
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1220 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 1161
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 1160 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 1101
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1100 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1041
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1040 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 981
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 980 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 921
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 920 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 861
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 860 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 801
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 800 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 741
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 740 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 681
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 680 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 621
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 620 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 561
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 560 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 501
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 500 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 441
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 440 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 381
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 380 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 321
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 320 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 261
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 260 ttgcagaagaatgttcaacgtgttactccatgctccagtt 221
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0463E12
Length = 161081
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 123482 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 123423
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 123422 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 123363
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 123362 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 123303
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 123302 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 123243
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 123242 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 123183
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 123182 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 123123
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 123122 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 123063
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 123062 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 123003
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 123002 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 122943
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 122942 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 122883
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 122882 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 122823
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 122822 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 122763
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 122762 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 122703
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 122702 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 122643
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 122642 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 122583
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 122582 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 122523
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 122522 ttgcagaagaatgttcaacgtgttactccatgctccagtt 122483
>dbj|AP005896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0032C09
Length = 127263
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 43954 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 43895
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 43894 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 43835
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 43834 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 43775
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 43774 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 43715
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 43714 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 43655
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 43654 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 43595
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 43594 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 43535
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 43534 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 43475
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 43474 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 43415
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 43414 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 43355
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 43354 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 43295
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 43294 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 43235
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 43234 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 43175
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 43174 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 43115
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 43114 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 43055
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 43054 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 42995
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 42994 ttgcagaagaatgttcaacgtgttactccatgctccagtt 42955
>gb|AACV01003378.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003378, whole
genome shotgun sequence
Length = 29069
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 5044 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 4985
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 4984 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 4925
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4924 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 4865
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 4864 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 4805
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 4804 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 4745
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 4744 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 4685
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 4684 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 4625
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 4624 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 4565
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 4564 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 4505
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 4504 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 4445
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 4444 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 4385
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 4384 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 4325
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 4324 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 4265
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 4264 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 4205
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 4204 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 4145
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 4144 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 4085
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 4084 ttgcagaagaatgttcaacgtgttactccatgctccagtt 4045
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 3044720 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 3044661
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 3044660 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 3044601
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3044600 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 3044541
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 3044540 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 3044481
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 3044480 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 3044421
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 3044420 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 3044361
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 3044360 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 3044301
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 3044300 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 3044241
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 3044240 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 3044181
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 3044180 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 3044121
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 3044120 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 3044061
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 3044060 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 3044001
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 3044000 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 3043941
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 3043940 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 3043881
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 3043880 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 3043821
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 3043820 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 3043761
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 3043760 ttgcagaagaatgttcaacgtgttactccatgctccagtt 3043721
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 3044720 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 3044661
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 3044660 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 3044601
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3044600 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 3044541
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 3044540 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 3044481
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 3044480 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 3044421
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 3044420 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 3044361
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 3044360 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 3044301
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 3044300 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 3044241
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 3044240 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 3044181
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 3044180 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 3044121
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 3044120 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 3044061
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 3044060 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 3044001
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 3044000 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 3043941
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 3043940 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 3043881
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 3043880 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 3043821
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 3043820 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 3043761
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 3043760 ttgcagaagaatgttcaacgtgttactccatgctccagtt 3043721
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 904 bits (456), Expect = 0.0
Identities = 864/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 2997843 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 2997784
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 2997783 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 2997724
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 2997723 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 2997664
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 2997663 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 2997604
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 2997603 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 2997544
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 2997543 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 2997484
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 2997483 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 2997424
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 2997423 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 2997364
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2997363 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 2997304
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 2997303 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 2997244
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 2997243 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 2997184
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 2997183 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 2997124
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 2997123 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 2997064
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 2997063 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 2997004
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| || ||||||||||||| |||||||||||||||
Sbjct: 2997003 gtactgtaaagctgtcaatgctccagggtaaggaaatttcatgactgcccatttgttgat 2996944
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 2996943 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 2996884
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 2996883 ttgcagaagaatgttcaacgtgttactccatgctccagtt 2996844
>dbj|AK071490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096O12, full
insert sequence
Length = 2568
Score = 896 bits (452), Expect = 0.0
Identities = 863/1000 (86%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 1214 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 1155
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 1154 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 1095
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1094 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 1035
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 1034 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 975
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 974 ggagaacccgaagaaggatatagatagcccgaacaagcacgacagagcaacaggaagaat 915
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 914 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 855
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 854 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 795
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaat 758
|||||||||||||||||| ||||||||||| ||||| ||||||||||| || || |||||
Sbjct: 794 aaggccccatgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaat 735
Query: 759 ggacatgcttgctaggtaggccactgcccaggtgtaagcagtcacagtgaattggttgtc 818
|||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 734 ggacatgcttgcaagatatgccactgcccaagtgtaagcagtcacagtgaactggttgtc 675
Query: 819 tgtgaaaacatagatcacacttccaccaagtattgtggagagtgaaagccatgtcttgag 878
||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 674 tgtgaaaacatagatcacacttccaccaagtatagttgaaagcgaaagccatgtcttgag 615
Query: 879 cgatggccatggctgatgaagatacagcgtctctccgatcgcgacaaatataggcacagc 938
||||||||||| || |||||||| | |||||||| || || ||||| || ||||||||
Sbjct: 614 tgatggccatggttggtgaagataaaaggtctctccaatggccacaaaaattggcacagc 555
Query: 939 agagcggaacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaa 998
|||||| ||||| |||||||| ||||||| |||||| || || |||||||| ||||||||
Sbjct: 554 agagcgaaacacgatgaaagtgtccacattggcatggagtagaagttcactgtttgtgaa 495
Query: 999 gatggagatgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaag 1058
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 494 gatggagatgtagaacatcacagcagcaggcaagaacttccacatggtcctcaaattaag 435
Query: 1059 tccatcgtgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaa 1118
||||| |||||||| ||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 434 gccatcatgctcaataagctttagttgtccacataagagaactccaacaacactagtgaa 375
Query: 1119 atactgcagagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgat 1178
||||| | |||||||| |||||||| | ||||||||||||| |||||||||||||||
Sbjct: 374 gtactgtaaagctgtcaatgctccagggcaaggaaatttcatgactgcccatttgttgat 315
Query: 1179 gatcgagagcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttg 1238
|| |||||||| || ||||| | ||||| ||||||||||||||||||| ||| | |||
Sbjct: 314 aatggagagcagagatgctgacaggcaataaccagcagccacaccatagactgaagtttg 255
Query: 1239 ctgcataagagtgttcaacatgttactccaggctccagtt 1278
|||| |||| |||||||| |||||||||| |||||||||
Sbjct: 254 ttgcagaagaatgttcaacgtgttactccatgctccagtt 215
>dbj|AP004099.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone OJ2100_D02,
*** SEQUENCING IN PROGRESS ***
Length = 105250
Score = 761 bits (384), Expect = 0.0
Identities = 735/852 (86%)
Strand = Plus / Plus
Query: 427 ttgtcccagataagcaaattaatcacaacagttaggagcttgttaactatgccaagcact 486
|||||||||||||| | ||||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 1 ttgtcccagataaggagattaatcacaacagtcaggagcttgttcactataccgagcacg 60
Query: 487 gtgaacccagtagcagaaatagctcgtctgcaggagaatccgaagaaggatattgataat 546
|| || ||||| || || ||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 61 gtaaatccagttgccgagatagcccgtctgcaggagaacccgaagaaggatatagatagc 120
Query: 547 ccaaacaggcatgagagagcaacagggaggaccacatcaaatgaaagccagtttgacact 606
|| |||| ||| || ||||||||||| || | |||||| ||||||||||||||| ||||
Sbjct: 121 ccgaacaagcacgacagagcaacaggaagaatgacatcagatgaaagccagtttgtcact 180
Query: 607 ttggagctgtcgaccttcatctgatcaaattctcccattacgagaagctcgagtgggaat 666
|| | ||||| |||||||||||| || || ||| ||| || | ||| || |||||
Sbjct: 181 ttagcattgtcgcccttcatctgattaagctcccccgttagaagcatctcaagagggaag 240
Query: 667 agcatcaaagcctcaaggttgttgtatagcacaaggccccatgtgttcagcccaatggtc 726
||||| ||||| || || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 241 agcatgaaagcttccagattgttgtaaagcacaaggccccatgtgttcaggccaatggtc 300
Query: 727 attacaacatgcttgatgtacacgaaatcaatggacatgcttgctaggtaggccactgcc 786
|| ||||| ||||||||||| || || ||||||||||||||||| || || |||||||||
Sbjct: 301 atgacaacgtgcttgatgtagacaaagtcaatggacatgcttgcaagatatgccactgcc 360
Query: 787 caggtgtaagcagtcacagtgaattggttgtctgtgaaaacatagatcacacttccacca 846
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagtgtaagcagtcacagtgaactggttgtctgtgaaaacatagatcacacttccacca 420
Query: 847 agtattgtggagagtgaaagccatgtcttgagcgatggccatggctgatgaagatacagc 906
||||| || || || ||||||||||||||||| ||||||||||| || |||||||| |
Sbjct: 421 agtatagttgaaagcgaaagccatgtcttgagtgatggccatggttggtgaagataaaag 480
Query: 907 gtctctccgatcgcgacaaatataggcacagcagagcggaacacaatgaaagtatccaca 966
|||||||| || || ||||| || |||||||||||||| ||||| |||||||| ||||||
Sbjct: 481 gtctctccaatggccacaaaaattggcacagcagagcgaaacacgatgaaagtgtccaca 540
Query: 967 tcggcatgaagcaggagttcactatttgtgaagatggagatgtagaacatcacagcagca 1026
| |||||| || || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggcatggagtagaagttcactgtttgtgaagatggagatgtagaacatcacagcagca 600
Query: 1027 ggtaagaacttccacattgtcctcaagttaagtccatcgtgctcaatgagcttgagctgt 1086
|| |||||||||||||| |||||||| ||||| ||||| |||||||| ||||| || |||
Sbjct: 601 ggcaagaacttccacatggtcctcaaattaaggccatcatgctcaataagctttagttgt 660
Query: 1087 ccacataggagaactccagcaacactagtgaaatactgcagagctgtcagggctccagga 1146
||||||| |||||||||| ||||||||||||| ||||| | |||||||| ||||||||
Sbjct: 661 ccacataagagaactccaacaacactagtgaagtactgtaaagctgtcaatgctccaggg 720
Query: 1147 tatggaaatttcatgattgcccatttgttgatgatcgagagcagcgacgctgataaacaa 1206
|| ||||||||||||| ||||||||||||||| || |||||||| || ||||| | |||
Sbjct: 721 taaggaaatttcatgactgcccatttgttgataatggagagcagagatgctgacaggcaa 780
Query: 1207 tacccagcagccacaccatagattgaggcttgctgcataagagtgttcaacatgttactc 1266
|| ||||||||||||||||||| ||| | ||| |||| |||| |||||||| ||||||||
Sbjct: 781 taaccagcagccacaccatagactgaagtttgttgcagaagaatgttcaacgtgttactc 840
Query: 1267 caggctccagtt 1278
|| |||||||||
Sbjct: 841 catgctccagtt 852
>gb|CB649808.1|CB649808 OSJNEb13P08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13P08 5', mRNA sequence
Length = 853
Score = 605 bits (305), Expect = e-170
Identities = 497/561 (88%)
Strand = Plus / Minus
Query: 718 ccaatggtcattacaacatgcttgatgtacacgaaatcaatggacatgcttgctaggtag 777
||||||||||| ||||| ||||||||||| || || ||||||||||||||||| || ||
Sbjct: 851 ccaatggtcatgacaacgtgcttgatgtagacaaagtcaatggacatgcttgcaagatat 792
Query: 778 gccactgcccaggtgtaagcagtcacagtgaattggttgtctgtgaaaacatagatcaca 837
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 791 gccactgcccaggtgtaagcagtcacagtgaactggttgtctgtgaaaacatagatcaca 732
Query: 838 cttccaccaagtattgtggagagtgaaagccatgtcttgagcgatggccatggctgatga 897
|||||||||||||| || || |||||||||||||||||||| ||||||||||| || |||
Sbjct: 731 cttccaccaagtatagttgaaagtgaaagccatgtcttgagtgatggccatggttggtga 672
Query: 898 agatacagcgtctctccgatcgcgacaaatataggcacagcagagcggaacacaatgaaa 957
||||| || |||||||| || || ||||| || |||||||| ||||| ||||| ||||||
Sbjct: 671 agataaagggtctctccaatggccacaaaaattggcacagctgagcgaaacacgatgaaa 612
Query: 958 gtatccacatcggcatgaagcaggagttcactatttgtgaagatggagatgtagaacatc 1017
|| ||||||| |||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct: 611 gtgtccacattggcatggagtagaagttcactgtttgtgaagatggagatgtagaacatc 552
Query: 1018 acagcagcaggtaagaacttccacattgtcctcaagttaagtccatcgtgctcaatgagc 1077
|| |||||||| |||||||||||||| |||||||| ||||| ||||| |||||||| |||
Sbjct: 551 accgcagcaggcaagaacttccacatggtcctcaaattaaggccatcatgctcaataagc 492
Query: 1078 ttgagctgtccacataggagaactccagcaacactagtgaaatactgcagagctgtcagg 1137
|| || |||||||||| |||||||||| ||||||||||||| ||||| | ||||||||
Sbjct: 491 tttagttgtccacataagagaactccaacaacactagtgaagtactgtaaagctgtcaat 432
Query: 1138 gctccaggatatggaaatttcatgattgcccatttgttgatgatcgagagcagcgacgct 1197
|||||||| |||||||||||||||| ||||||||||||||| || |||||||| || |||
Sbjct: 431 gctccagggtatggaaatttcatgactgcccatttgttgataatggagagcagggatgct 372
Query: 1198 gataaacaatacccagcagccacaccatagattgaggcttgctgcataagagtgttcaac 1257
|| | ||||| ||||||||||||||||||| ||| ||||| |||| |||| ||||||||
Sbjct: 371 gacaggcaataaccagcagccacaccatagactgaagcttgttgcagaagaatgttcaac 312
Query: 1258 atgttactccaggctccagtt 1278
|||||||||| |||||||||
Sbjct: 311 gtgttactccatgctccagtt 291
>gb|CB648867.1|CB648867 OSJNEb12H18.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H18 5', mRNA sequence
Length = 774
Score = 515 bits (260), Expect = e-143
Identities = 428/484 (88%)
Strand = Plus / Minus
Query: 795 agcagtcacagtgaattggttgtctgtgaaaacatagatcacacttccaccaagtattgt 854
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 774 agcagtcacagtgaactggttgtctgtgaaaacatagatcacacttccaccaagtatagt 715
Query: 855 ggagagtgaaagccatgtcttgagcgatggccatggctgatgaagatacagcgtctctcc 914
|| |||||||||||||||||||| ||||||||||| || |||||||| || ||||||||
Sbjct: 714 tgaaagtgaaagccatgtcttgagtgatggccatggttggtgaagataaagggtctctcc 655
Query: 915 gatcgcgacaaatataggcacagcagagcggaacacaatgaaagtatccacatcggcatg 974
|| || ||||| || |||||||| ||||| ||||| |||||||| ||||||| ||||||
Sbjct: 654 aatggccacaaaaattggcacagctgagcgaaacacgatgaaagtgtccacattggcatg 595
Query: 975 aagcaggagttcactatttgtgaagatggagatgtagaacatcacagcagcaggtaagaa 1034
|| || |||||||| ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 594 gagtagaagttcactgtttgtgaagatggagatgtagaacatcaccgcagcaggcaagaa 535
Query: 1035 cttccacattgtcctcaagttaagtccatcgtgctcaatgagcttgagctgtccacatag 1094
||||||||| |||||||| ||||| ||||| |||||||| ||||| || ||||||||||
Sbjct: 534 cttccacatggtcctcaaattaaggccatcatgctcaataagctttagttgtccacataa 475
Query: 1095 gagaactccagcaacactagtgaaatactgcagagctgtcagggctccaggatatggaaa 1154
|||||||||| ||||||||||||| ||||| | |||||||| |||||||| ||||||||
Sbjct: 474 gagaactccaacaacactagtgaagtactgtaaagctgtcaatgctccagggtatggaaa 415
Query: 1155 tttcatgattgcccatttgttgatgatcgagagcagcgacgctgataaacaatacccagc 1214
|||||||| ||||||||||||||| || |||||||| || ||||| | ||||| |||||
Sbjct: 414 tttcatgactgcccatttgttgataatggagagcagggatgctgacaggcaataaccagc 355
Query: 1215 agccacaccatagattgaggcttgctgcataagagtgttcaacatgttactccaggctcc 1274
|||||||||||||| ||| ||||| |||| |||| |||||||| |||||||||| |||||
Sbjct: 354 agccacaccatagactgaagcttgttgcagaagaatgttcaacgtgttactccatgctcc 295
Query: 1275 agtt 1278
||||
Sbjct: 294 agtt 291
>gb|CL518224.1|CL518224 SAE5C02 Flanking Sequence Tag of Oryza sativa T-DNA insertion lines
Oryza sativa (japonica cultivar-group) genomic, DNA
sequence
Length = 515
Score = 385 bits (194), Expect = e-104
Identities = 435/514 (84%), Gaps = 1/514 (0%)
Strand = Plus / Plus
Query: 288 cagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttgggcgccttcgg 347
||||| ||||||||||||||| || ||||| || || |||||| ||||||| ||||| ||
Sbjct: 2 cagcagtttctgctgctcctcatcattctcctcttttggctcagccttgggggcctttgg 61
Query: 348 tttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagagcccaatggt 407
||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 62 ttttgtggtggattgctggtagagaacaccaccggacatgcatatcaagagcccaattgt 121
Query: 408 acccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagttaggagctt 467
|||||||| |||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 122 tcccacaaaggaggcatgcttgtcccagatcatgtgattaatcacaacagccaggagctt 181
Query: 468 gttaactatgccaagcactgtgaacccagtagcagaaatagctc-gtctgcaggagaatc 526
||| ||||| || ||||| || || |||| || || ||||| | ||||||||||||| |
Sbjct: 182 gttcactataccgagcacggtaaattcagttgccgagatagccctgtctgcaggagaacc 241
Query: 527 cgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggaccacatcaa 586
||||||||||||| ||| || || |||||| ||| || |||| || | ||||||
Sbjct: 242 cgaagaaggatatagatggcccttactagcatgacagatcatcaggaagaatgacatcag 301
Query: 587 atgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattctcccatta 646
|||||||||||| || |||||| | ||||||| |||||||||||| || || |||||||
Sbjct: 302 atgaaagccagtgtgtcactttagcgctgtcgcccttcatctgattaagctcccccatta 361
Query: 647 cgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcacaaggcccc 706
|| | ||| || ||||| |||||||||||||| || |||||||| |||||||||||||
Sbjct: 362 gaagcatctcaagagggaagagcatcaaagcctccagattgttgtaaagcacaaggcccc 421
Query: 707 atgtgttcagcccaatggtcattacaacatgcttgatgtacacgaaatcaatggacatgc 766
|||||||||| ||||||||||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 422 atgtgttcaggccaatggtcatgacaacgtgcttgatgtagacaaagtcaatggacatgc 481
Query: 767 ttgctaggtaggccactgcccaggtgtaagcagt 800
|||| || || |||||||||||||||||||||||
Sbjct: 482 ttgcaagatatgccactgcccaggtgtaagcagt 515
>gb|AU030800.1|AU030800 AU030800 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60261_2Z, mRNA sequence
Length = 680
Score = 361 bits (182), Expect = 7e-097
Identities = 396/468 (84%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| |||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 477 ctgcatctccagcaacttctgctgctcctcatcattctcctcttttggctcagccttggg 418
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct: 417 ggcctttggttttgtggtggactgctggtagagaacactaccggacatgcagatcaagag 358
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 357 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 298
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 297 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 238
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 237 ggagaacccgaagaaggatatagatagcccgaacaagcacganagagcaacaggaagaat 178
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||| |||||||||||| || ||
Sbjct: 177 gacatcagatgaaagccagtttgtcactttagcattgtcgcccttcatctgattaagctc 118
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctcaaggttgttgtatagcac 698
||| ||| || | ||| || ||||| ||||| ||||| || || |||||||| |||||
Sbjct: 117 ccccgttagaagcatctcaagagggaagagcatgaaagcttccagattgttgtaaagcac 58
Query: 699 aaggccccatgtgttcagcccaatggtcattacaacatgcttgatgta 746
|||||||||||||||||| ||||||||||| |||| |||||||||||
Sbjct: 57 aaggccccatgtgttcaggccaatggtcatgacaangtgcttgatgta 10
>gb|CB648868.1|CB648868 OSJNEb12H18.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H18 3', mRNA sequence
Length = 832
Score = 337 bits (170), Expect = 1e-089
Identities = 344/402 (85%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 418 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 477
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 478 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 537
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||| ||||| | |||||||||||||||
Sbjct: 538 cccaattgttcccacaaaggaggcatgcttgtcccacataaggagattaatcacaacagt 597
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 598 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 657
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 658 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 717
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcgaccttcatctgatcaaattc 638
|||||| ||||||||||||||| |||||| | ||||||| |||||||||||| || ||
Sbjct: 718 gacatcagatgaaagccagtttgtcactttagcgctgtcgcccttcatctgattaagctc 777
Query: 639 tcccattacgagaagctcgagtgggaatagcatcaaagcctc 680
||||||| || | ||| || ||||| ||||||||||||||
Sbjct: 778 ccccattagaagcatctcaagagggaagagcatcaaagcctc 819
>gb|C72535.1|C72535 C72535 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1801_1A, mRNA sequence
Length = 401
Score = 325 bits (164), Expect = 4e-086
Identities = 290/333 (87%)
Strand = Plus / Minus
Query: 946 aacacaatgaaagtatccacatcggcatgaagcaggagttcactatttgtgaagatggag 1005
||||| |||||| | ||||||| |||||| || || |||||||| | ||||||| |||||
Sbjct: 371 aacacgatgaaantgtccacattggcatggagtagaagttcactgtntgtgaagntggag 312
Query: 1006 atgtagaacatcacagcagcaggtaagaacttccacattgtcctcaagttaagtccatcg 1065
|||||||||||||| |||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 311 atgtagaacatcaccgcagcaggcaagaacttccacatggtcctcaaattaaggccatca 252
Query: 1066 tgctcaatgagcttgagctgtccacataggagaactccagcaacactagtgaaatactgc 1125
|||||||| ||||| || |||||||||| |||||||||| ||||||||||||| |||||
Sbjct: 251 tgctcaataagctttagttgtccacataagagaactccaacaacactagtgaagtactgt 192
Query: 1126 agagctgtcagggctccaggatatggaaatttcatgattgcccatttgttgatgatcgag 1185
| |||||||| |||||||| |||||||||||||||| ||||||||||||||| || |||
Sbjct: 191 aaagctgtcaatgctccagggtatggaaatttcatgactgcccatttgttgataatggag 132
Query: 1186 agcagcgacgctgataaacaatacccagcagccacaccatagattgaggcttgctgcata 1245
||||| || ||||| | ||||| ||||||||||||||||||| ||| ||||| |||| |
Sbjct: 131 agcagggatgctgacaggcaataaccagcagccacaccatagactgaagcttgttgcaga 72
Query: 1246 agagtgttcaacatgttactccaggctccagtt 1278
||| |||||||| |||||||||| |||||||||
Sbjct: 71 agaatgttcaacgtgttactccatgctccagtt 39
>gb|CB649809.1|CB649809 OSJNEb13P08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13P08 3', mRNA sequence
Length = 730
Score = 321 bits (162), Expect = 6e-085
Identities = 307/354 (86%), Gaps = 1/354 (0%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 373 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 432
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 433 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 492
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 493 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 552
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 553 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 612
Query: 519 ggagaatccgaagaaggatattgataatccaaacaggcatgagagagcaacagggaggac 578
|||||| |||||||||||||| |||| || |||| ||| || ||||||||||| || |
Sbjct: 613 ggagaacccgaagaaggatatagatagcccgaacaagcaagacagagcaacaggaagaat 672
Query: 579 cacatcaaatgaaagccagtttgacactttggagctgtcg-accttcatctgat 631
|||||| ||||||||||||||| |||||| | ||||||| ||||||||||||
Sbjct: 673 gacatcagatgaaagccagtttgtcactttagcgctgtcgccccttcatctgat 726
>gb|AU223367.1|AU223367 AU223367 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6178, mRNA sequence
Length = 447
Score = 280 bits (141), Expect = 2e-072
Identities = 231/261 (88%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 261 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 202
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 201 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 142
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataagcaaattaatcacaacagt 458
|||||| || |||||||| ||||||||||||||||||||||| | |||||||||||||||
Sbjct: 141 cccaattgttcccacaaaggaggcatgcttgtcccagataaggagattaatcacaacagt 82
Query: 459 taggagcttgttaactatgccaagcactgtgaacccagtagcagaaatagctcgtctgca 518
||||||||||| ||||| || ||||| || || ||||| || || ||||| ||||||||
Sbjct: 81 caggagcttgttcactataccgagcacggtaaatccagttgccgagatagcccgtctgca 22
Query: 519 ggagaatccgaagaaggatat 539
|||||| ||||||||||||||
Sbjct: 21 ggagaacccgaagaaggatat 1
>gb|AU095149.1|AU095149 AU095149 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60261, mRNA sequence
Length = 465
Score = 224 bits (113), Expect = 1e-055
Identities = 225/261 (86%), Gaps = 1/261 (0%)
Strand = Plus / Minus
Query: 1019 cagcagcaggtaagaacttccacattgtcct-caagttaagtccatcgtgctcaatgagc 1077
|||||||||| ||| |||||||||| ||||| ||| ||||| ||||| |||||||| |||
Sbjct: 465 cagcagcaggcaaggacttccacatggtccttcaaattaaggccatcatgctcaataagc 406
Query: 1078 ttgagctgtccacataggagaactccagcaacactagtgaaatactgcagagctgtcagg 1137
|| || |||||||||| |||||||||| ||||||||||||| ||||| | ||||||||
Sbjct: 405 tttagttgtccacataagagaactccaacaacactagtgaagtactgtaaagctgtcaat 346
Query: 1138 gctccaggatatggaaatttcatgattgcccatttgttgatgatcgagagcagcgacgct 1197
|||||||| || ||||||||||||| ||||||||||||||| || |||||||| || |||
Sbjct: 345 gctccagggtaaggaaatttcatgactgcccatttgttgataatggagagcagagatgct 286
Query: 1198 gataaacaatacccagcagccacaccatagattgaggcttgctgcataagagtgttcaac 1257
|| | ||||| ||||||||||||||||||| ||| | ||| |||| |||| ||||||||
Sbjct: 285 gacaggcaataaccagcagccacaccatagactgaagtttgttgcagaagaatgttcaac 226
Query: 1258 atgttactccaggctccagtt 1278
|||||||||| |||||||||
Sbjct: 225 gtgttactccatgctccagtt 205
>gb|D24744.1|D24744 RICR2479A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2479_1A, mRNA sequence
Length = 237
Score = 208 bits (105), Expect = 6e-051
Identities = 190/220 (86%)
Strand = Plus / Minus
Query: 325 ggctcaaccttgggcgccttcggtttcgtggtggattgctggtagagcacaccacctgac 384
|||||| |||| | ||||| ||||| ||| |||| ||||||||||| |||||||| |||
Sbjct: 224 ggctcagccttnngggcctttggttttgtgntggantgctggtagagaacaccaccggac 165
Query: 385 atgcatatcaagagcccaatggtacccacaaaagaggcatgcttgtcccagataagcaaa 444
||||| ||||||||||||| || |||||||| ||||||||||||||||||||||| | |
Sbjct: 164 atgcagatcaagagcccaantgttcccacaaaggaggcatgcttgtcccagataaggaga 105
Query: 445 ttaatcacaacagttaggagcttgttaactatgccaagcactgtgaacccagtagcagaa 504
|||||||||||||| ||||||||||| ||||| || ||||| || || ||||| || ||
Sbjct: 104 ttaatcacaacagtcaggagcttgttcactataccgagcacggtaaatccagttgccgag 45
Query: 505 atagctcgtctgcaggagaatccgaagaaggatattgata 544
||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 44 atagcccgtctgcaggagaacccgaagaaggatatagata 5
>gb|AU093990.1|AU093990 AU093990 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1801, mRNA sequence
Length = 711
Score = 190 bits (96), Expect = 1e-045
Identities = 145/162 (89%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 189 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 130
Query: 339 cgccttcggtttcgtggtggattgctggtagagcacaccacctgacatgcatatcaagag 398
||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 129 ggcctttggttttgtggtggattgctggtagagaacaccaccggacatgcagatcaagag 70
Query: 399 cccaatggtacccacaaaagaggcatgcttgtcccagataag 440
|||||| || |||||||| ||||||||||||| |||||||||
Sbjct: 69 cccaattgttcccacaaangaggcatgcttgtnccagataag 28
>gb|C71688.1|C71688 C71688 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0066_2A, mRNA sequence
Length = 404
Score = 125 bits (63), Expect = 7e-026
Identities = 155/182 (85%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 1100 ctccagcaacactagtgaaatact-gcagagctgtcagggc-tccaggatatggaaa-tt 1156
||||| ||||||||||||| |||| | | |||||||| || |||||| |||||||| ||
Sbjct: 372 ctccaacaacactagtgaagtacttgtaaagctgtcaatgcctccagggtatggaaaatt 313
Query: 1157 tcatgattgcccatttgttgatgatcgagagcagcgacgctgataaacaatacccagcag 1216
|||||| ||||||||||||||| || |||||||| || ||| | | ||||| |||||||
Sbjct: 312 tcatgactgcccatttgttgataatggagagcagggatgctnacaggcaataaccagcag 253
Query: 1217 ccacaccatagattgaggcttgctgcataagagtgttcaacatgttactccaggctccag 1276
|||||||||||| ||| ||||| |||| |||| |||||||| |||||||||| |||||||
Sbjct: 252 ccacaccatagactgaagcttgttgcagaagaatgttcaacgtgttactccatgctccag 193
Query: 1277 tt 1278
||
Sbjct: 192 tt 191
>gb|AU223368.1|AU223368 AU223368 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6178, mRNA sequence
Length = 451
Score = 67.9 bits (34), Expect = 1e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctcttccttcggctcaaccttggg 338
|||||||| ||||||||||||||||||||| || ||||| || || |||||| |||||||
Sbjct: 66 ctgcatctccagcaatttctgctgctcctcatcattctcctcttttggctcagccttggg 7
Query: 339 cgcctt 344
|||||
Sbjct: 6 ggcctt 1
>gb|CV731112.1|CV731112 FLO--04-P20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-P20,
mRNA sequence
Length = 435
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 279 ctgcatctgcagcaatttctgctgctcctcgtcgttctc 317
|||||||| ||||||||||||||||||||| || |||||
Sbjct: 395 ctgcatctccagcaatttctgctgctcctcatcattctc 433
>gb|AU031903.1|AU031903 AU031903 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2479_6Z, mRNA sequence
Length = 472
Score = 52.0 bits (26), Expect = 9e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 279 ctgcatctgcagcaatttctgctgctcctc 308
|||||||| |||||||||||||||||||||
Sbjct: 85 ctgcatctccagcaatttctgctgctcctc 56
>gb|AACV01018557.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018557, whole
genome shotgun sequence
Length = 17742
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1452 gcgcggtggtcgccggaggtgg 1473
||||||||||||||||||||||
Sbjct: 4761 gcgcggtggtcgccggaggtgg 4740
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1452 gcgcggtggtcgccggaggtgg 1473
||||||||||||||||||||||
Sbjct: 12561250 gcgcggtggtcgccggaggtgg 12561229
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 44.1 bits (22), Expect = 0.22
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1452 gcgcggtggtcgccggaggtgg 1473
||||||||||||||||||||||
Sbjct: 20163256 gcgcggtggtcgccggaggtgg 20163235
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,052,649
Number of Sequences: 438736
Number of extensions: 2052649
Number of successful extensions: 11603
Number of sequences better than 0.5: 37
Number of HSP's better than 0.5 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11296
Number of HSP's gapped (non-prelim): 294
length of query: 1484
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1463
effective length of database: 2,791,206,460
effective search space: 4083535050980
effective search space used: 4083535050980
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)