BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573929.2.1
(691 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB681122.1|CB681122 OSJNEf06P20.r OSJNEf Oryza sativa (j... 212 2e-052
gb|CF277249.1|CF277249 14ETL--02-L11.b1 Rice etiolated leaf... 212 2e-052
gb|CF308514.1|CF308514 ABF--02-F22.g1 ABF3-overexpressing t... 212 2e-052
gb|CF309751.1|CF309751 ABF--04-A24.g1 ABF3-overexpressing t... 212 2e-052
dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUG... 212 2e-052
ref|XM_476032.1| Oryza sativa (japonica cultivar-group), p... 212 2e-052
gb|CF310156.1|CF310156 ABF--04-K17.g1 ABF3-overexpressing t... 200 7e-049
gb|AU093034.1|AU093034 AU093034 Rice callus Oryza sativa (j... 198 3e-048
gb|CB658458.1|CB658458 OSJNEc14I03.r OSJNEc Oryza sativa (j... 196 1e-047
gb|CF315233.1|CF315233 HD--04-B06.g1 OsHDAC1-overexpressing... 196 1e-047
gb|CB684794.1|CB684794 OSJNEf14K15.r OSJNEf Oryza sativa (j... 188 3e-045
gb|CF276200.1|CF276200 14ETL--01-E04.g1 Rice etiolated leaf... 184 4e-044
gb|CF308368.1|CF308368 ABF--02-C17.g1 ABF3-overexpressing t... 184 4e-044
gb|CF308937.1|CF308937 ABF--02-P01.g1 ABF3-overexpressing t... 184 4e-044
gb|CF309124.1|CF309124 ABF--03-D03.g1 ABF3-overexpressing t... 184 4e-044
gb|CF309463.1|CF309463 ABF--03-K15.g1 ABF3-overexpressing t... 184 4e-044
gb|CF313990.1|CF313990 HD--02-F13.g1 OsHDAC1-overexpressing... 184 4e-044
gb|CB684793.1|CB684793 OSJNEf14K15.f OSJNEf Oryza sativa (j... 182 2e-043
gb|CF310061.1|CF310061 ABF--04-I11.g1 ABF3-overexpressing t... 182 2e-043
gb|CF320976.1|CF320976 HD--12-B04.b1 OsHDAC1-overexpressing... 182 2e-043
gb|CF321935.1|CF321935 HD--13-F17.g1 OsHDAC1-overexpressing... 182 2e-043
gb|CF312561.1|CF312561 ABF--08-F24.b1 ABF3-overexpressing t... 176 1e-041
gb|CF309247.1|CF309247 ABF--03-F21.g1 ABF3-overexpressing t... 172 2e-040
gb|CF320798.1|CF320798 HD--11-N03.b1 OsHDAC1-overexpressing... 172 2e-040
gb|CF309927.1|CF309927 ABF--04-F05.g1 ABF3-overexpressing t... 165 4e-038
gb|CF310802.1|CF310802 ABF--05-K18.b1 ABF3-overexpressing t... 165 4e-038
gb|CF336872.1|CF336872 JMT--07-B11.b1 AtJMT-overexpressing ... 151 6e-034
gb|CF309246.1|CF309246 ABF--03-F21.b1 ABF3-overexpressing t... 149 2e-033
gb|CF307798.1|CF307798 ABF--01-F19.b1 ABF3-overexpressing t... 143 1e-031
gb|AU161347.1|AU161347 AU161347 Rice callus Oryza sativa (j... 141 6e-031
gb|CF292804.1|CF292804 30DGS--01-M06.b1 Rice leaf plasmid c... 129 2e-027
gb|CF280539.1|CF280539 14ETL--07-E02.g1 Rice etiolated leaf... 119 2e-024
gb|CF310885.1|CF310885 ABF--05-M21.g1 ABF3-overexpressing t... 119 2e-024
gb|CF320518.1|CF320518 HD--11-H04.b1 OsHDAC1-overexpressing... 119 2e-024
gb|CF314144.1|CF314144 HD--02-I24.g1 OsHDAC1-overexpressing... 117 8e-024
gb|CF315220.1|CF315220 HD--04-A23.g1 OsHDAC1-overexpressing... 117 8e-024
gb|AU166961.1|AU166961 AU166961 Rice callus (2001) Oryza sa... 107 8e-021
gb|CF292805.1|CF292805 30DGS--01-M06.g1 Rice leaf plasmid c... 105 3e-020
gb|CF313351.1|CF313351 HD--01-H06.g1 OsHDAC1-overexpressing... 98 8e-018
gb|CF311300.1|CF311300 ABF--06-H13.g1 ABF3-overexpressing t... 94 1e-016
gb|CF321248.1|CF321248 HD--12-H01.g1 OsHDAC1-overexpressing... 90 2e-015
gb|CF307799.1|CF307799 ABF--01-F19.g1 ABF3-overexpressing t... 86 3e-014
gb|CF315219.1|CF315219 HD--04-A23.b1 OsHDAC1-overexpressing... 86 3e-014
gb|AQ859023.1|AQ859023 nbeb0006J13f CUGI Rice BAC Library (... 76 3e-011
dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
gb|AACV01012825.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 76 3e-011
gb|AC136217.4| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 76 3e-011
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 76 3e-011
dbj|AK070317.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
gb|C98597.1|C98597 C98597 Rice panicle at flowering stage O... 68 7e-009
gb|CB681121.1|CB681121 OSJNEf06P20.f OSJNEf Oryza sativa (j... 68 7e-009
dbj|AK063871.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AK121426.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
ref|XM_450508.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
ref|XM_450509.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
gb|CB649206.1|CB649206 OSJNEb13A07.r OSJNEb Oryza sativa (j... 56 3e-005
gb|CB669622.1|CB669622 OSJNEe02D23.f OSJNEe Oryza sativa (j... 56 3e-005
gb|CB669623.1|CB669623 OSJNEe02D23.r OSJNEe Oryza sativa (j... 56 3e-005
gb|CB672511.1|CB672511 OSJNEe06J08.r OSJNEe Oryza sativa (j... 56 3e-005
dbj|AB096863.1| Oryza sativa (japonica cultivar-group) OsUG... 56 3e-005
dbj|AK066269.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
ref|XM_482070.1| Oryza sativa (japonica cultivar-group), mRNA 56 3e-005
dbj|AP005879.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AACV01019597.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 54 1e-004
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|CB679083.1|CB679083 OSJNEf02C10.r OSJNEf Oryza sativa (j... 48 0.006
gb|CV152471.1|CV152471 LS34-S.SEQ Cold stressed rice cDNA l... 46 0.025
>gb|CB681122.1|CB681122 OSJNEf06P20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06P20 3', mRNA sequence
Length = 841
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 651 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 592
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 591 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 532
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 531 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 472
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 471 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 412
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 411 ctgtggaattgggcgagcaagaacccctacgggta 377
>gb|CF277249.1|CF277249 14ETL--02-L11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-L11, mRNA sequence
Length = 632
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 615 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 556
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 555 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 496
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 495 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 436
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 435 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 376
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 375 ctgtggaattgggcgagcaagaacccctacgggta 341
>gb|CF308514.1|CF308514 ABF--02-F22.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-F22, mRNA sequence
Length = 602
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 562 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 503
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 502 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 443
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 442 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 383
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 382 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 323
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 322 ctgtggaattgggcgagcaagaacccctacgggta 288
>gb|CF309751.1|CF309751 ABF--04-A24.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-A24, mRNA sequence
Length = 633
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 618 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 559
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 558 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 499
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 498 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 439
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 438 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 379
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 378 ctgtggaattgggcgagcaagaacccctacgggta 344
>dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUGE-1 mRNA for UDP-glucose
4-epimerase, complete cds
Length = 1346
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 852 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 911
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 912 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 971
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 972 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 1031
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 1032 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 1091
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 1092 ctgtggaattgggcgagcaagaacccctacgggta 1126
>ref|XM_476032.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1065
Score = 212 bits (107), Expect = 2e-052
Identities = 233/275 (84%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 766 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 825
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 826 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 885
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 886 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 945
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 946 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 1005
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 1006 ctgtggaattgggcgagcaagaacccctacgggta 1040
>gb|CF310156.1|CF310156 ABF--04-K17.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-K17, mRNA sequence
Length = 588
Score = 200 bits (101), Expect = 7e-049
Identities = 212/249 (85%)
Strand = Plus / Minus
Query: 93 aataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggt 152
|||||| ||||| |||||||| |||| |||||||||||||| || ||| ||||||||||
Sbjct: 572 aataggatgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggt 513
Query: 153 ggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcgaagacc 212
|| ||||||||||| |||||||| ||||||||||| || || || ||||| ||||| ||
Sbjct: 512 tgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctggacgaaggcc 453
Query: 213 cggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaaatggaa 272
||||| || |||||||| ||||| ||||||||| || |||||||| || ||||||||
Sbjct: 452 tggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaa 393
Query: 273 ggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaaccc 332
||| || |||||| | |||||||||||||| || |||||||| |||||||||||||||||
Sbjct: 392 ggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaaccc 333
Query: 333 gtacgggta 341
||||||||
Sbjct: 332 ctacgggta 324
>gb|AU093034.1|AU093034 AU093034 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61726, mRNA sequence
Length = 701
Score = 198 bits (100), Expect = 3e-048
Identities = 231/275 (84%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 124 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 183
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 184 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 243
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 244 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 303
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 304 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 363
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||| || ||||||||
Sbjct: 364 ctgtggaattgggcgagcaaganaccctacgggta 398
>gb|CB658458.1|CB658458 OSJNEc14I03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14I03 3', mRNA sequence
Length = 730
Score = 196 bits (99), Expect = 1e-047
Identities = 231/275 (84%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| |||||
Sbjct: 655 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggccctgga 596
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||| ||| |||||||||
Sbjct: 595 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttttggaaagaaaatc 536
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 535 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 476
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 475 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 416
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 415 ctgtggaattgggcgagcaagaacccctacgggta 381
>gb|CF315233.1|CF315233 HD--04-B06.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-B06, mRNA sequence
Length = 673
Score = 196 bits (99), Expect = 1e-047
Identities = 232/275 (84%), Gaps = 1/275 (0%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 615 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 556
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 555 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 496
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 495 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 436
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 435 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcaggga- 377
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
| |||||| ||||||||||||||||| ||||||||
Sbjct: 376 ccgtggaattgggcgagcaagaacccctacgggta 342
>gb|CB684794.1|CB684794 OSJNEf14K15.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14K15 3', mRNA sequence
Length = 714
Score = 188 bits (95), Expect = 3e-045
Identities = 230/275 (83%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
|||||||| || ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 666 aggaagctttatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 607
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||| ||| |||||||||
Sbjct: 606 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttttggaaagaaaatc 547
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || ||||| || ||||| |||||||
Sbjct: 546 ccgcttgtatttgctggacgaaggcctggagatgccgagattgtttacgctcaaactgcc 487
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 486 aaagctgagaaggatctgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 427
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 426 ctgtggaattgggcgagcaagaacccctacgggta 392
>gb|CF276200.1|CF276200 14ETL--01-E04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-E04, mRNA sequence
Length = 611
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 608 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 549
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 548 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 489
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 488 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 429
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 428 agggacctgtggaattgggcgagcaagaacccctacgggta 388
>gb|CF308368.1|CF308368 ABF--02-C17.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-C17, mRNA sequence
Length = 568
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 564 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 505
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 504 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 445
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 444 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 385
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 384 agggacctgtggaattgggcgagcaagaacccctacgggta 344
>gb|CF308937.1|CF308937 ABF--02-P01.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--02-P01, mRNA sequence
Length = 561
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 561 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 502
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 501 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 442
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 441 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 382
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 381 agggacctgtggaattgggcgagcaagaacccctacgggta 341
>gb|CF309124.1|CF309124 ABF--03-D03.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-D03, mRNA sequence
Length = 574
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 570 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 511
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 510 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 451
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 450 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 391
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 390 agggacctgtggaattgggcgagcaagaacccctacgggta 350
>gb|CF309463.1|CF309463 ABF--03-K15.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-K15, mRNA sequence
Length = 561
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 561 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 502
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 501 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 442
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 441 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 382
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 381 agggacctgtggaattgggcgagcaagaacccctacgggta 341
>gb|CF313990.1|CF313990 HD--02-F13.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-F13, mRNA sequence
Length = 563
Score = 184 bits (93), Expect = 4e-044
Identities = 189/221 (85%)
Strand = Plus / Minus
Query: 121 actggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaag 180
|||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||
Sbjct: 561 actggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaag 502
Query: 181 aaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgca 240
|||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| |
Sbjct: 501 aaaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaa 442
Query: 241 actgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgc 300
|||||||| || |||||||| || ||||||||||| || |||||| | ||||||||||||
Sbjct: 441 actgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgc 382
Query: 301 agagatctgtggaactgggcgagcaagaacccgtacgggta 341
|| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 381 agggacctgtggaattgggcgagcaagaacccctacgggta 341
>gb|CB684793.1|CB684793 OSJNEf14K15.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14K15 5', mRNA sequence
Length = 651
Score = 182 bits (92), Expect = 2e-043
Identities = 231/276 (83%), Gaps = 1/276 (0%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 18 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 77
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || | | |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 78 aaggggacatctgcgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 137
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 138 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 197
Query: 247 aaggc-agagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagaga 305
|| || || ||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 198 aaagctcgataaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcaggga 257
Query: 306 tctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 258 cctgtggaattgggcgagcaagaacccctacgggta 293
>gb|CF310061.1|CF310061 ABF--04-I11.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-I11, mRNA sequence
Length = 564
Score = 182 bits (92), Expect = 2e-043
Identities = 188/220 (85%)
Strand = Plus / Minus
Query: 122 ctggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaaga 181
||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| ||||
Sbjct: 564 ctggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaaga 505
Query: 182 aaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaa 241
||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct: 504 aaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaa 445
Query: 242 ctgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgca 301
||||||| || |||||||| || ||||||||||| || |||||| | |||||||||||||
Sbjct: 444 ctgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgca 385
Query: 302 gagatctgtggaactgggcgagcaagaacccgtacgggta 341
| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 384 gggacctgtggaattgggcgagcaagaacccctacgggta 345
>gb|CF320976.1|CF320976 HD--12-B04.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-B04, mRNA sequence
Length = 557
Score = 182 bits (92), Expect = 2e-043
Identities = 188/220 (85%)
Strand = Plus / Minus
Query: 122 ctggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaaga 181
||||||||||||| || ||| |||||||||| || ||||||||||| |||||||| ||||
Sbjct: 557 ctggaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaaga 498
Query: 182 aaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaa 241
||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct: 497 aaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaa 438
Query: 242 ctgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgca 301
||||||| || |||||||| || ||||||||||| || |||||| | |||||||||||||
Sbjct: 437 ctgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgca 378
Query: 302 gagatctgtggaactgggcgagcaagaacccgtacgggta 341
| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 377 gggacctgtggaattgggcgagcaagaacccctacgggta 338
>gb|CF321935.1|CF321935 HD--13-F17.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-F17, mRNA sequence
Length = 564
Score = 182 bits (92), Expect = 2e-043
Identities = 215/256 (83%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 435 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 376
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 375 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 316
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 315 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 256
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 255 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 196
Query: 307 ctgtggaactgggcga 322
|||||||| |||||||
Sbjct: 195 ctgtggaattgggcga 180
>gb|CF312561.1|CF312561 ABF--08-F24.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--08-F24, mRNA sequence
Length = 557
Score = 176 bits (89), Expect = 1e-041
Identities = 185/217 (85%)
Strand = Plus / Minus
Query: 125 gaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaa 184
|||||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||
Sbjct: 557 gaaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaa 498
Query: 185 tccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactg 244
|||| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||
Sbjct: 497 tcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactg 438
Query: 245 ccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagag 304
|||| || |||||||| || ||||||||||| || |||||| | |||||||||||||| |
Sbjct: 437 ccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcaggg 378
Query: 305 atctgtggaactgggcgagcaagaacccgtacgggta 341
| |||||||| ||||||||||||||||| ||||||||
Sbjct: 377 acctgtggaattgggcgagcaagaacccctacgggta 341
>gb|CF309247.1|CF309247 ABF--03-F21.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-F21, mRNA sequence
Length = 641
Score = 172 bits (87), Expect = 2e-040
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 641 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 582
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 581 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 522
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 521 aaagctgagaaggaactgaaatggaaggcaaaatacggggtggaggagatgtgcagggac 462
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 461 ctgtggaattgggcgagcaagaacccctacgggta 427
>gb|CF320798.1|CF320798 HD--11-N03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-N03, mRNA sequence
Length = 560
Score = 172 bits (87), Expect = 2e-040
Identities = 183/215 (85%)
Strand = Plus / Minus
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 560 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 501
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 500 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 441
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
|| || |||||||| || ||||||||||| || |||||| | |||||||||||||| ||
Sbjct: 440 aaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggac 381
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggta 341
|||||||| ||||||||||||||||| ||||||||
Sbjct: 380 ctgtggaattgggcgagcaagaacccctacgggta 346
>gb|CF309927.1|CF309927 ABF--04-F05.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-F05, mRNA sequence
Length = 541
Score = 165 bits (83), Expect = 4e-038
Identities = 170/199 (85%)
Strand = Plus / Minus
Query: 143 tggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctg 202
|||||||||| || ||||||||||| |||||||| ||||||||||| || || || ||||
Sbjct: 537 tggaaatggttgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctg 478
Query: 203 ggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagc 262
| ||||| || ||||| || |||||||| ||||| ||||||||| || |||||||| |
Sbjct: 477 gacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaac 418
Query: 263 tcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcga 322
| ||||||||||| || |||||| | |||||||||||||| || |||||||| |||||||
Sbjct: 417 tgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcga 358
Query: 323 gcaagaacccgtacgggta 341
|||||||||| ||||||||
Sbjct: 357 gcaagaacccctacgggta 339
>gb|CF310802.1|CF310802 ABF--05-K18.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-K18, mRNA sequence
Length = 631
Score = 165 bits (83), Expect = 4e-038
Identities = 170/199 (85%)
Strand = Plus / Minus
Query: 143 tggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctg 202
|||||||||| || ||||||||||| |||||||| ||||||||||| || || || ||||
Sbjct: 628 tggaaatggttgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctg 569
Query: 203 ggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagc 262
| ||||| || ||||| || |||||||| ||||| ||||||||| || |||||||| |
Sbjct: 568 gacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaac 509
Query: 263 tcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcga 322
| ||||||||||| || |||||| | |||||||||||||| || |||||||| |||||||
Sbjct: 508 tgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcga 449
Query: 323 gcaagaacccgtacgggta 341
|||||||||| ||||||||
Sbjct: 448 gcaagaacccctacgggta 430
>gb|CF336872.1|CF336872 JMT--07-B11.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--07-B11, mRNA sequence
Length = 542
Score = 151 bits (76), Expect = 6e-034
Identities = 160/188 (85%)
Strand = Plus / Minus
Query: 145 gaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctggg 204
|||||||| || ||||||||||| |||||||| ||||||||||| || || || |||||
Sbjct: 542 gaaatggttgcagcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctgga 483
Query: 205 cgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctc 264
||||| || ||||| || |||||||| ||||| ||||||||| || |||||||| ||
Sbjct: 482 cgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactg 423
Query: 265 aaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagc 324
||||||||||| || |||||| | |||||||||||||| || |||||||| |||||||||
Sbjct: 422 aaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagc 363
Query: 325 aagaaccc 332
||||||||
Sbjct: 362 aagaaccc 355
>gb|CF309246.1|CF309246 ABF--03-F21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-F21, mRNA sequence
Length = 594
Score = 149 bits (75), Expect = 2e-033
Identities = 183/219 (83%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 376 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 435
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 436 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 495
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||||| || |||||||| ||||| |||||||
Sbjct: 496 ccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgcc 555
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacggg 285
|| || |||||||| || ||||||||||| || ||||||
Sbjct: 556 aaagctgagaaggaactgaaatggaaggcaaaatacggg 594
>gb|CF307798.1|CF307798 ABF--01-F19.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-F19, mRNA sequence
Length = 448
Score = 143 bits (72), Expect = 1e-031
Identities = 184/220 (83%), Gaps = 1/220 (0%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaag-tgtacaacttggggactgg 125
||||||||||| ||||| || || | |||||| ||||||| ||||||| |||| |||||
Sbjct: 228 aggaagctctatgaagattctgatagaataggatgtgaaggtgtacaatctgggcactgg 287
Query: 126 aaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaat 185
||||||||| || ||| |||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 288 aaaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaat 347
Query: 186 ccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgc 245
||| || || || ||||| ||||| || ||||| || |||||||| ||||| ||||||
Sbjct: 348 cccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaactgc 407
Query: 246 caaggcagagaaggagctcaaatggaaggccaagtacggg 285
||| || |||||||| || ||||||||||| || ||||||
Sbjct: 408 caaagctgagaaggaactgaaatggaaggcaaaatacggg 447
>gb|AU161347.1|AU161347 AU161347 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61839, mRNA sequence
Length = 573
Score = 141 bits (71), Expect = 6e-031
Identities = 156/185 (84%)
Strand = Plus / Plus
Query: 157 gcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcgaagacccgga 216
||||||||||| |||||||| ||||||||||| || || || ||||| ||||| || |||
Sbjct: 38 gcattcgagaaagcttctggaaagaaaatcccgcttgtatttgctggacgaaggcctgga 97
Query: 217 gacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaaatggaaggcc 276
| || |||||||| ||||| ||||||||| || |||||||| || |||||||||||
Sbjct: 98 natgccgagatcgtttacgctcaaactgccaaagctgagaaggaactgaaatggaaggca 157
Query: 277 aagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtac 336
|| | |||| | |||||||||||||| || |||||||| ||||||||||||||||| |||
Sbjct: 158 aaatncggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctac 217
Query: 337 gggta 341
|||||
Sbjct: 218 gggta 222
>gb|CF292804.1|CF292804 30DGS--01-M06.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-M06, mRNA sequence
Length = 544
Score = 129 bits (65), Expect = 2e-027
Identities = 174/209 (83%), Gaps = 1/209 (0%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 332 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 391
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| |||||||| |||||||||
Sbjct: 392 aaggggacatctgtgctggaaatggttgcagcattcgagaaagcttctggaaagaaaatc 451
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || ||| | || |||||||| ||||| |||||||
Sbjct: 452 ccgcttgtatttgctggacgaaggcctgga-atgccgagatcgtttacgctcaaactgcc 510
Query: 247 aaggcagagaaggagctcaaatggaaggc 275
|| || |||||||| || |||||||||||
Sbjct: 511 aaagctgagaaggaactgaaatggaaggc 539
>gb|CF280539.1|CF280539 14ETL--07-E02.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-E02, mRNA sequence
Length = 443
Score = 119 bits (60), Expect = 2e-024
Identities = 135/160 (84%)
Strand = Plus / Minus
Query: 182 aaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaa 241
||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct: 443 aaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaa 384
Query: 242 ctgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgca 301
||||||| || |||||||| || ||||||||||| || |||||| | |||||||||||||
Sbjct: 383 ctgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgca 324
Query: 302 gagatctgtggaactgggcgagcaagaacccgtacgggta 341
| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 323 gggacctgtggaattgggcgagcaagaacccctacgggta 284
>gb|CF310885.1|CF310885 ABF--05-M21.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-M21, mRNA sequence
Length = 507
Score = 119 bits (60), Expect = 2e-024
Identities = 135/160 (84%)
Strand = Plus / Minus
Query: 182 aaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaa 241
||||||| || || || ||||| ||||| || ||||| || |||||||| ||||| ||
Sbjct: 507 aaatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgctcaaa 448
Query: 242 ctgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgca 301
||||||| || |||||||| || ||||||||||| || |||||| | |||||||||||||
Sbjct: 447 ctgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgca 388
Query: 302 gagatctgtggaactgggcgagcaagaacccgtacgggta 341
| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 387 gggacctgtggaattgggcgagcaagaacccctacgggta 348
>gb|CF320518.1|CF320518 HD--11-H04.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-H04, mRNA sequence
Length = 511
Score = 119 bits (60), Expect = 2e-024
Identities = 138/164 (84%)
Strand = Plus / Minus
Query: 178 aagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgcc 237
||||| ||||| || || || ||||| ||||| || ||||| || |||||||| |||||
Sbjct: 507 aagaagatcccgcttgtatttgctggacgaaggcctggagatgccgagatcgtttacgct 448
Query: 238 gcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatg 297
||||||||| || |||||||| || ||||||||||| || |||||| | |||||||||
Sbjct: 447 caaactgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatg 388
Query: 298 tgcagagatctgtggaactgggcgagcaagaacccgtacgggta 341
||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 387 tgcagggacctgtggaattgggcgagcaagaacccctacgggta 344
>gb|CF314144.1|CF314144 HD--02-I24.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-I24, mRNA sequence
Length = 645
Score = 117 bits (59), Expect = 8e-024
Identities = 170/207 (82%)
Strand = Plus / Minus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| ||||||
Sbjct: 313 aggaagctctatgaagattctgatagaataggatgtgaggtgtacaatctgggcactgga 254
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||| |||||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 253 aaggggacatctgtgctggaaatggttgcagcattcgagaaagaatctggaaagaaaatc 194
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| || || || ||||| ||||| || | ||| || |||||||| ||||| |||||||
Sbjct: 193 ccgcttgtatttgctggacgaaggcctgaagatgccgagatcgtttacgctcaaactgcc 134
Query: 247 aaggcagagaaggagctcaaatggaag 273
|| || |||||||| || |||||||||
Sbjct: 133 aaagctgagaaggaactgaaatggaag 107
>gb|CF315220.1|CF315220 HD--04-A23.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-A23, mRNA sequence
Length = 447
Score = 117 bits (59), Expect = 8e-024
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 199 gctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaag 258
||||| ||||| || ||||| || |||||||| ||||| ||||||||| || ||||||
Sbjct: 433 gctggacgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaag 374
Query: 259 gagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgg 318
|| || ||||||||||| || |||||| | |||||||||||||| || |||||||| |||
Sbjct: 373 gaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgg 314
Query: 319 gcgagcaagaacccgtacgggta 341
|||||||||||||| ||||||||
Sbjct: 313 gcgagcaagaacccctacgggta 291
>gb|AU166961.1|AU166961 AU166961 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C60360, mRNA sequence
Length = 455
Score = 107 bits (54), Expect = 8e-021
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 240 aactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtg 299
||||||||| || |||||||| || ||||||||||| || |||||| | |||||||||||
Sbjct: 3 aactgccaaagctgagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtg 62
Query: 300 cagagatctgtggaactgggcgagcaagaacccgtacgggta 341
||| || |||||||| ||||||||||||||||| ||||||||
Sbjct: 63 cagggacctgtggaattgggcgagcaagaacccctacgggta 104
>gb|CF292805.1|CF292805 30DGS--01-M06.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-M06, mRNA sequence
Length = 480
Score = 105 bits (53), Expect = 3e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 205 cgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctc 264
||||| || ||||| || |||||||| ||||| ||||||||| || |||||||| ||
Sbjct: 476 cgaaggcctggagatgccgagatcgtttacgctcaaactgccaaagctgagaaggaactg 417
Query: 265 aaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagc 324
||||||||||| || |||||| | |||| ||||||||| || |||||||| |||||||||
Sbjct: 416 aaatggaaggcaaaatacggggtagaggggatgtgcagggacctgtggaattgggcgagc 357
Query: 325 aagaacccgtacgggta 341
|||||||| ||||||||
Sbjct: 356 aagaacccctacgggta 340
>gb|CF313351.1|CF313351 HD--01-H06.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-H06, mRNA sequence
Length = 437
Score = 97.6 bits (49), Expect = 8e-018
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 253 gagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtgg 312
|||||||| || ||||||||||| || |||||| | |||||||||||||| || ||||||
Sbjct: 437 gagaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtgg 378
Query: 313 aactgggcgagcaagaacccgtacgggta 341
|| ||||||||||||||||| ||||||||
Sbjct: 377 aattgggcgagcaagaacccctacgggta 349
>gb|CF311300.1|CF311300 ABF--06-H13.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-H13, mRNA sequence
Length = 428
Score = 93.7 bits (47), Expect = 1e-016
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 255 gaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaa 314
|||||| || ||||||||||| || |||||| | |||||||||||||| || ||||||||
Sbjct: 428 gaaggaactgaaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaa 369
Query: 315 ctgggcgagcaagaacccgtacgggta 341
||||||||||||||||| ||||||||
Sbjct: 368 ttgggcgagcaagaacccctacgggta 342
>gb|CF321248.1|CF321248 HD--12-H01.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-H01, mRNA sequence
Length = 424
Score = 89.7 bits (45), Expect = 2e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 265 aaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagc 324
||||||||||| || |||||| | |||||||||||||| || |||||||| |||||||||
Sbjct: 424 aaatggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagc 365
Query: 325 aagaacccgtacgggta 341
|||||||| ||||||||
Sbjct: 364 aagaacccctacgggta 348
>gb|CF307799.1|CF307799 ABF--01-F19.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-F19, mRNA sequence
Length = 446
Score = 85.7 bits (43), Expect = 3e-014
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 267 atggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaa 326
||||||||| || |||||| | |||||||||||||| || |||||||| |||||||||||
Sbjct: 446 atggaaggcaaaatacggggtagaggagatgtgcagggacctgtggaattgggcgagcaa 387
Query: 327 gaacccgtacgggta 341
|||||| ||||||||
Sbjct: 386 gaacccctacgggta 372
>gb|CF315219.1|CF315219 HD--04-A23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-A23, mRNA sequence
Length = 649
Score = 85.7 bits (43), Expect = 3e-014
Identities = 104/123 (84%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggc-tgtgaagtgtacaacttggggactgg 125
||||||||||| ||||| || || | |||||| ||||| |||||||| |||| |||||
Sbjct: 513 aggaagctctatgaagattctgatagaataggaatgtgaggtgtacaatctgggcactgg 572
Query: 126 aaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaat 185
||||||||| || ||| ||| |||||| || ||||||||||| |||||||| ||||||||
Sbjct: 573 aaaggggacatctgtgctgggaatggttgcagcattcgagaaagcttctggaaagaaaat 632
Query: 186 ccc 188
|||
Sbjct: 633 ccc 635
>gb|AQ859023.1|AQ859023 nbeb0006J13f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0006J13f, DNA sequence
Length = 464
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 213 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 154
Query: 340 ta 341
||
Sbjct: 153 ta 152
>dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I17, full
insert sequence
Length = 3495
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 3401 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 3460
Query: 340 ta 341
||
Sbjct: 3461 ta 3462
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 2996 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 3055
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 3056 ttcgagaaagcttctgg 3072
>gb|AACV01012825.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012825, whole
genome shotgun sequence
Length = 24986
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 17795 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 17736
Query: 340 ta 341
||
Sbjct: 17735 ta 17734
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 18200 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 18141
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 18140 ttcgagaaagcttctgg 18124
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 1049979 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 1050038
Query: 340 ta 341
||
Sbjct: 1050039 ta 1050040
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 1049574 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 1049633
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 1049634 ttcgagaaagcttctgg 1049650
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0030I14, complete sequence
Length = 159035
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 63080 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 63139
Query: 340 ta 341
||
Sbjct: 63140 ta 63141
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 62675 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 62734
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 62735 ttcgagaaagcttctgg 62751
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 11830738 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 11830797
Query: 340 ta 341
||
Sbjct: 11830798 ta 11830799
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 11830333 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 11830392
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 11830393 ttcgagaaagcttctgg 11830409
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 75.8 bits (38), Expect = 3e-011
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
|||||| | |||||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct: 29131051 tacggggtagaggagatgtgcagggacctgtggaattgggcgagcaagaacccctacggg 29131110
Query: 340 ta 341
||
Sbjct: 29131111 ta 29131112
Score = 73.8 bits (37), Expect = 1e-010
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
||||| |||||||| |||| |||||||||||||| || ||| |||||||||| || |||
Sbjct: 29130646 tgtgaggtgtacaatctgggcactggaaaggggacatctgtgctggaaatggttgcagca 29130705
Query: 160 ttcgagaaggcttctgg 176
|||||||| ||||||||
Sbjct: 29130706 ttcgagaaagcttctgg 29130722
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,014,095
Number of Sequences: 438736
Number of extensions: 1014095
Number of successful extensions: 9479
Number of sequences better than 0.5: 73
Number of HSP's better than 0.5 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9243
Number of HSP's gapped (non-prelim): 231
length of query: 691
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 670
effective length of database: 2,791,206,460
effective search space: 1870108328200
effective search space used: 1870108328200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)