BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4534747.2.1
(628 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069983.1| Oryza sativa (japonica cultivar-group) cDNA... 250 8e-064
gb|AACV01000522.1| Oryza sativa (japonica cultivar-group) c... 250 8e-064
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 250 8e-064
ref|NM_188644.1| Oryza sativa (japonica cultivar-group), Oz... 250 8e-064
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 250 8e-064
dbj|AP002481.1| Oryza sativa (japonica cultivar-group) geno... 250 8e-064
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 250 8e-064
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 250 8e-064
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 250 8e-064
dbj|AP004001.3| Oryza sativa (japonica cultivar-group) geno... 198 3e-048
dbj|AP005533.3| Oryza sativa (japonica cultivar-group) geno... 198 3e-048
gb|AACV01003918.1| Oryza sativa (japonica cultivar-group) c... 198 3e-048
ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA 198 3e-048
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 198 3e-048
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 198 3e-048
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 198 3e-048
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 198 3e-048
dbj|AK072256.1| Oryza sativa (japonica cultivar-group) cDNA... 194 4e-047
dbj|AK107045.1| Oryza sativa (japonica cultivar-group) cDNA... 194 4e-047
gb|AC118286.2| Oryza sativa (japonica cultivar-group) chrom... 194 4e-047
gb|AC105768.2| Oryza sativa (japonica cultivar-group) chrom... 194 4e-047
gb|AACV01011342.1| Oryza sativa (japonica cultivar-group) c... 194 4e-047
ref|NT_107226.1| Oryza sativa (japonica cultivar-group) 194 4e-047
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 194 4e-047
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 194 4e-047
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 194 4e-047
dbj|AK101944.1| Oryza sativa (japonica cultivar-group) cDNA... 176 9e-042
gb|AACV01005055.1| Oryza sativa (japonica cultivar-group) c... 176 9e-042
ref|XM_467102.1| Oryza sativa (japonica cultivar-group), mRNA 176 9e-042
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 176 9e-042
dbj|AP004676.3| Oryza sativa (japonica cultivar-group) geno... 176 9e-042
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 176 9e-042
gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A1... 147 8e-033
ref|NM_197757.1| Oryza sativa (japonica cultivar-group) put... 147 8e-033
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 147 8e-033
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 147 8e-033
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 147 8e-033
dbj|AK064321.1| Oryza sativa (japonica cultivar-group) cDNA... 139 2e-030
gb|AACV01022113.1| Oryza sativa (japonica cultivar-group) c... 137 8e-030
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 137 8e-030
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 137 8e-030
gb|AQ860104.1|AQ860104 nbeb0014M05f CUGI Rice BAC Library (... 125 3e-026
dbj|AK122055.1| Oryza sativa (japonica cultivar-group) cDNA... 105 3e-020
emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC O... 105 3e-020
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 105 3e-020
gb|AACV01023973.1| Oryza sativa (japonica cultivar-group) c... 105 3e-020
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 105 3e-020
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 105 3e-020
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 105 3e-020
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 105 3e-020
dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA... 98 7e-018
dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA... 98 7e-018
dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA... 98 7e-018
gb|AACV01000277.1| Oryza sativa (japonica cultivar-group) c... 98 7e-018
dbj|AP003215.3| Oryza sativa (japonica cultivar-group) geno... 98 7e-018
ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA 98 7e-018
ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA 98 7e-018
ref|NT_107134.1| Oryza sativa (japonica cultivar-group) 90 2e-015
gb|AACV01016684.1| Oryza sativa (japonica cultivar-group) c... 90 2e-015
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 90 2e-015
gb|AC120307.3| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|AC134240.2| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|AACV01025337.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
ref|NT_107191.1| Oryza sativa (japonica cultivar-group) 68 6e-009
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|AU172504.1|AU172504 AU172504 Rice panicle at flowering s... 64 1e-007
emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OS... 64 1e-007
ref|NT_107107.1| Oryza sativa chromosome 3, . BAC OSJNBa002... 64 1e-007
gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic ... 64 1e-007
gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 ... 64 1e-007
gb|AACV01007448.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|NT_079918.2| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|AU182374.1|AU182374 AU182374 Rice panicle at flowering s... 62 4e-007
dbj|AK102945.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
gb|AACV01010227.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
ref|XM_473399.1| Oryza sativa (japonica cultivar-group), p... 58 6e-006
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 58 6e-006
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC... 58 6e-006
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AK100536.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AP005759.3| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|AACV01020253.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 56 2e-005
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|AQ363715.2|AQ363715 nbxb0059D12f CUGI Rice BAC Library O... 54 9e-005
dbj|AK069460.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AP003883.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
dbj|AP005245.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AACV01018813.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
ref|XM_483231.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 54 9e-005
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AQ365786.2|AQ365786 nbxb0064B05f CUGI Rice BAC Library O... 52 4e-004
dbj|AK107126.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Parti... 52 4e-004
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 52 4e-004
emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC O... 52 4e-004
gb|AACV01024886.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AACV01005319.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
dbj|AP004179.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005113.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AK103656.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.090
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
ref|XM_483096.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
gb|D15569.1|D15569 RICC0846A Rice callus Oryza sativa (japo... 42 0.35
gb|AU102166.1|AU102166 AU102166 Rice callus Oryza sativa (j... 42 0.35
gb|AACV01001911.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
gb|AACV01013076.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
dbj|AB026295.2| Oryza sativa (japonica cultivar-group) geno... 42 0.35
dbj|AP004317.1| Oryza sativa (japonica cultivar-group) geno... 42 0.35
dbj|AP007251.1| Oryza sativa (japonica cultivar-group) geno... 42 0.35
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 42 0.35
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 42 0.35
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 42 0.35
>dbj|AK069983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037H09, full
insert sequence
Length = 2068
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 1296 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 1355
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 1356 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 1415
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 1416 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 1475
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 1476 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 1521
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 1556 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 1615
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 1616 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 1675
Query: 412 cgt 414
|||
Sbjct: 1676 cgt 1678
>gb|AACV01000522.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000522, whole
genome shotgun sequence
Length = 39836
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 13699 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 13758
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 13759 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 13818
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 13819 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 13878
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 13879 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 13924
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 13959 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 14018
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 14019 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 14078
Query: 412 cgt 414
|||
Sbjct: 14079 cgt 14081
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 7400323 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 7400382
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7400383 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7400442
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 7400443 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 7400502
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 7400503 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 7400548
Score = 97.6 bits (49), Expect = 7e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||||| ||||||||| || |||||||||||||| ||||||||| | || |||
Sbjct: 3832847 gcgcggtccaagtcgttcgtgggcacgcacgagtacctggcgccggaggtgatctccggc 3832788
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|||||||||| |||||||||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 3832787 cagggccacggcagcgcggtggactggtggacgctcggcgtgttcatgtacgagatgctg 3832728
Query: 185 catggcacgacgccgttcaagggggacagcaac 217
| ||| ||||||||||||||| || ||||||
Sbjct: 3832727 tacggccggacgccgttcaagggcgagagcaac 3832695
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 7400583 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 7400642
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 7400643 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 7400702
Query: 412 cgt 414
|||
Sbjct: 7400703 cgt 7400705
Score = 42.1 bits (21), Expect = 0.35
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
||||| || ||||| || |||||||||| || || |||||||| |||||||||||
Sbjct: 25545733 ggccatggcagcgccgtcgactggtggatgtttagcttcttcctgcacgagctcctctgc 25545674
Query: 188 ggcacgacgccgttcaagggg 208
|||| ||| ||||||||||||
Sbjct: 25545673 ggcaagacaccgttcaagggg 25545653
>ref|NM_188644.1| Oryza sativa (japonica cultivar-group), Ozsa8247 predicted mRNA
Length = 1554
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 1030 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 1089
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 1090 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 1149
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 1150 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 1209
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 1210 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 1255
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 1290 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 1349
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 1350 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 1409
Query: 412 cgt 414
|||
Sbjct: 1410 cgt 1412
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 7400163 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 7400222
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7400223 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7400282
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 7400283 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 7400342
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 7400343 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 7400388
Score = 97.6 bits (49), Expect = 7e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||||| ||||||||| || |||||||||||||| ||||||||| | || |||
Sbjct: 3832847 gcgcggtccaagtcgttcgtgggcacgcacgagtacctggcgccggaggtgatctccggc 3832788
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|||||||||| |||||||||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 3832787 cagggccacggcagcgcggtggactggtggacgctcggcgtgttcatgtacgagatgctg 3832728
Query: 185 catggcacgacgccgttcaagggggacagcaac 217
| ||| ||||||||||||||| || ||||||
Sbjct: 3832727 tacggccggacgccgttcaagggcgagagcaac 3832695
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 7400423 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 7400482
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 7400483 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 7400542
Query: 412 cgt 414
|||
Sbjct: 7400543 cgt 7400545
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0702F03
Length = 141111
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 63569 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 63628
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 63629 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 63688
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 63689 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 63748
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 63749 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 63794
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 63829 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 63888
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 63889 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 63948
Query: 412 cgt 414
|||
Sbjct: 63949 cgt 63951
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 7478982 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 7479041
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7479042 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7479101
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 7479102 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 7479161
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 7479162 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 7479207
Score = 97.6 bits (49), Expect = 7e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||||| ||||||||| || |||||||||||||| ||||||||| | || |||
Sbjct: 3882328 gcgcggtccaagtcgttcgtgggcacgcacgagtacctggcgccggaggtgatctccggc 3882269
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|||||||||| |||||||||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 3882268 cagggccacggcagcgcggtggactggtggacgctcggcgtgttcatgtacgagatgctg 3882209
Query: 185 catggcacgacgccgttcaagggggacagcaac 217
| ||| ||||||||||||||| || ||||||
Sbjct: 3882208 tacggccggacgccgttcaagggcgagagcaac 3882176
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 7479242 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 7479301
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 7479302 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 7479361
Query: 412 cgt 414
|||
Sbjct: 7479362 cgt 7479364
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 7478982 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 7479041
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7479042 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7479101
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 7479102 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 7479161
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 7479162 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 7479207
Score = 97.6 bits (49), Expect = 7e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||||| ||||||||| || |||||||||||||| ||||||||| | || |||
Sbjct: 3882328 gcgcggtccaagtcgttcgtgggcacgcacgagtacctggcgccggaggtgatctccggc 3882269
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|||||||||| |||||||||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 3882268 cagggccacggcagcgcggtggactggtggacgctcggcgtgttcatgtacgagatgctg 3882209
Query: 185 catggcacgacgccgttcaagggggacagcaac 217
| ||| ||||||||||||||| || ||||||
Sbjct: 3882208 tacggccggacgccgttcaagggcgagagcaac 3882176
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 7479242 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 7479301
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 7479302 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 7479361
Query: 412 cgt 414
|||
Sbjct: 7479362 cgt 7479364
Score = 42.1 bits (21), Expect = 0.35
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
||||| || ||||| || |||||||||| || || |||||||| |||||||||||
Sbjct: 25153147 ggccatggcagcgccgtcgactggtggatgtttagcttcttcctgcacgagctcctctgc 25153088
Query: 188 ggcacgacgccgttcaagggg 208
|||| ||| ||||||||||||
Sbjct: 25153087 ggcaagacaccgttcaagggg 25153067
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 250 bits (126), Expect = 8e-064
Identities = 201/226 (88%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 7402541 gagttcaacgcggagccgacggacgcgcggtccatgtcgttcgtgggcacgcacgagtac 7402600
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7402601 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7402660
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| | ||||| |||||||||||||| |||| |||||| ||||||||| ||||||||||
Sbjct: 7402661 ggggtgttcctctacgagctcctccacggcatgacgccattcaaggggagcagcaaccgc 7402720
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacg 266
|||||||| |||||||| ||||| |||||||| |||||||||||||
Sbjct: 7402721 gccacgctctgcaacgtcgtcgagcagccgctccggttccccgacg 7402766
Score = 97.6 bits (49), Expect = 7e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||||| ||||||||| || |||||||||||||| ||||||||| | || |||
Sbjct: 3835045 gcgcggtccaagtcgttcgtgggcacgcacgagtacctggcgccggaggtgatctccggc 3834986
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|||||||||| |||||||||||||||||||| ||||| | ||| |||||||| | ||
Sbjct: 3834985 cagggccacggcagcgcggtggactggtggacgctcggcgtgttcatgtacgagatgctg 3834926
Query: 185 catggcacgacgccgttcaagggggacagcaac 217
| ||| ||||||||||||||| || ||||||
Sbjct: 3834925 tacggccggacgccgttcaagggcgagagcaac 3834893
Score = 77.8 bits (39), Expect = 6e-012
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 292 cgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgccac 351
|||||| |||||||||||||| || || ||||||||||||||| ||||| ||||| |
Sbjct: 7402801 cgtcgcgcgggacctcatccggggcctcctggtgaaggaccccggcaagaggatcgcgtc 7402860
Query: 352 caggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcact 411
|||||||| || | |||||||||||||| || ||||| || || ||||||||||| ||
Sbjct: 7402861 gaggaggggcgccaccgagatcaagcagcatcccttcttcgagggcgtcaactgggcgct 7402920
Query: 412 cgt 414
|||
Sbjct: 7402921 cgt 7402923
Score = 42.1 bits (21), Expect = 0.35
Identities = 66/81 (81%)
Strand = Plus / Minus
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
||||| || ||||| || |||||||||| || || |||||||| |||||||||||
Sbjct: 25467016 ggccatggcagcgccgtcgactggtggatgtttagcttcttcctgcacgagctcctctgc 25466957
Query: 188 ggcacgacgccgttcaagggg 208
|||| ||| ||||||||||||
Sbjct: 25466956 ggcaagacaccgttcaagggg 25466936
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1115_D03
Length = 169378
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 65257 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 65198
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 65197 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 65138
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 65137 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 65078
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 65077 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 65030
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 64935 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 64889
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0018M09
Length = 157377
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 143466 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 143407
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 143406 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 143347
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 143346 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 143287
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 143286 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 143239
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 143144 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 143098
>gb|AACV01003918.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003918, whole
genome shotgun sequence
Length = 36154
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 7704 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 7645
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 7644 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 7585
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 7584 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 7525
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 7524 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 7477
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 7382 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 7336
>ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1494
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 952 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 1011
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 1012 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 1071
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 1072 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 1131
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 1132 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 1179
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 1274 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 1320
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 4758728 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 4758669
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 4758668 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 4758609
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 4758608 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 4758549
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 4758548 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 4758501
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 4758406 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 4758360
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 10720333 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 10720274
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 10720273 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 10720214
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 10720213 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 10720154
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 10720153 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 10720106
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 10720011 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 10719965
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 10720333 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 10720274
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 10720273 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 10720214
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 10720213 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 10720154
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 10720153 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 10720106
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 26330166 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 26330225
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 26330226 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 26330285
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 26330286 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 26330345
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 26330346 cagcagctgcggttccc 26330362
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 10720011 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 10719965
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 gagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcgg 162
|||||| ||| |||||||||||| || ||||| || || ||||||||||||||
Sbjct: 30104608 gagatcatcaaaggcgagggccatggtagcgctgtcgattggtggaccttcgg 30104660
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 26330460 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 26330500
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 198 bits (100), Expect = 3e-048
Identities = 196/228 (85%)
Strand = Plus / Minus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||| |||||||||||||| ||| |||| | ||||||||| || ||||||||||||
Sbjct: 10725776 gagttcaccgcggagccgacgggggcgaggtcgatgtcgttcgtgggcacgcacgagtac 10725717
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| |||||||||||| || | |||||||| ||||| ||||| || ||||||||||| |||
Sbjct: 10725716 ctggcgccggagatcatccgcggcgaggggcacggcagcgccgtcgactggtggacgttc 10725657
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
||| | |||||||||||||| || || || ||||||||||||||||| | ||||||||
Sbjct: 10725656 ggcgtgttcctgtacgagctgctgcacgggacgacgccgttcaagggctccggcaaccgc 10725597
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttccccgacgcg 268
|||||||||| |||||| |||| ||||||||| |||||||| ||||||
Sbjct: 10725596 gccacgctgttcaacgtcgtcggccagccgctccggttcccggacgcg 10725549
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 26414297 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 26414356
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 26414357 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 26414416
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 26414417 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 26414476
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 26414477 cagcagctgcggttccc 26414493
Score = 54.0 bits (27), Expect = 9e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 372 tcaagcagcacccgttctttgatggggtcaactgggcactcgtcagg 418
||||||||||||||||||| || || ||||||||||| || ||||||
Sbjct: 10725454 tcaagcagcacccgttcttcgacggcgtcaactgggcgctggtcagg 10725408
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 gagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcgg 162
|||||| ||| |||||||||||| || ||||| || || ||||||||||||||
Sbjct: 30156563 gagatcatcaaaggcgagggccatggtagcgctgtcgattggtggaccttcgg 30156615
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 26414591 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 26414631
>dbj|AK072256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009I16, full
insert sequence
Length = 2021
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 1370 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 1429
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 1430 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 1489
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 1490 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 1549
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 1550 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 1591
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 1611 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 1670
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 1671 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 1730
Query: 411 tcgtcagg 418
||||||||
Sbjct: 1731 tcgtcagg 1738
>dbj|AK107045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C08, full
insert sequence
Length = 2127
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 1351 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 1410
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 1411 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 1470
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 1471 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 1530
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 1531 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 1572
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 1592 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 1651
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 1652 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 1711
Query: 411 tcgtcagg 418
||||||||
Sbjct: 1712 tcgtcagg 1719
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
OJ1384_A02, complete sequence
Length = 100251
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 77772 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 77831
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 77832 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 77891
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 77892 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 77951
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 77952 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 77993
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 78013 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 78072
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 78073 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 78132
Query: 411 tcgtcagg 418
||||||||
Sbjct: 78133 tcgtcagg 78140
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08,
complete sequence
Length = 143955
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 2352 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 2411
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 2412 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 2471
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 2472 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 2531
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 2532 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 2573
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 2593 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 2652
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 2653 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 2712
Query: 411 tcgtcagg 418
||||||||
Sbjct: 2713 tcgtcagg 2720
>gb|AACV01011342.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011342, whole
genome shotgun sequence
Length = 15046
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 5217 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 5276
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 5277 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 5336
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 5337 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 5396
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 5397 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 5438
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 5458 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 5517
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 5518 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 5577
Query: 411 tcgtcagg 418
||||||||
Sbjct: 5578 tcgtcagg 5585
>ref|NT_107226.1| Oryza sativa (japonica cultivar-group)
Length = 1041917
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 1019438 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 1019497
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 1019498 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 1019557
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 1019558 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 1019617
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 1019618 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 1019659
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 1019679 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 1019738
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 1019739 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 1019798
Query: 411 tcgtcagg 418
||||||||
Sbjct: 1019799 tcgtcagg 1019806
>gb|CH401195.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000032
genomic scaffold, whole genome shotgun sequence
Length = 1766531
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 495279 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 495338
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 495339 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 495398
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 495399 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 495458
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 495459 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 495500
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 495520 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 495579
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 495580 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 495639
Query: 411 tcgtcagg 418
||||||||
Sbjct: 495640 tcgtcagg 495647
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 9296556 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 9296615
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 9296616 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 9296675
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 9296676 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 9296735
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 9296736 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 9296777
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 9296797 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 9296856
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 9296857 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 9296916
Query: 411 tcgtcagg 418
||||||||
Sbjct: 9296917 tcgtcagg 9296924
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 194 bits (98), Expect = 4e-047
Identities = 191/222 (86%)
Strand = Plus / Plus
Query: 41 gagttcaacgcggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtac 100
||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||||||
Sbjct: 8281284 gagttcaacgcggagccgacggaggcgcggtccatgtcgttcgtgggcacgcacgagtac 8281343
Query: 101 ctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttc 160
|| || ||||||||| || | |||||||||||||| ||||| || ||||||||||| |
Sbjct: 8281344 ctggccccggagatcatccgcggcgagggccacggcagcgccgtcgactggtggacgctg 8281403
Query: 161 ggcatcttcctgtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgc 220
|| |||||||| ||||||||| |||| ||| | || ||||||||||| | | ||||||||
Sbjct: 8281404 ggaatcttcctctacgagctcatccacggcgccaccccgttcaagggcgccggcaaccgc 8281463
Query: 221 gccacgctgtgcaacgtggtcgaccagccgctgcggttcccc 262
|||||||| |||||||| |||| |||||||| || ||||||
Sbjct: 8281464 gccacgctctgcaacgtcatcgagcagccgctccgcttcccc 8281505
Score = 63.9 bits (32), Expect = 1e-007
Identities = 104/128 (81%)
Strand = Plus / Plus
Query: 291 ccgtcgcccgggacctcatccgtgggcttctggtgaaggacccccagaagagaatcgcca 350
||||||| || ||||||||||| || || || || ||||| ||||| ||| | ||||||
Sbjct: 8281525 ccgtcgcgcgtgacctcatccgcggcctgctcgtcaaggagccccacaagcggatcgcct 8281584
Query: 351 ccaggaggggtgcagctgagatcaagcagcacccgttctttgatggggtcaactgggcac 410
|| ||||| || | ||||||||||||||||| ||||| || || ||||||||||| |
Sbjct: 8281585 tcaccaggggcgccaccgagatcaagcagcaccccttcttcgacggcgtcaactgggcgc 8281644
Query: 411 tcgtcagg 418
||||||||
Sbjct: 8281645 tcgtcagg 8281652
>dbj|AK101944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074L09, full
insert sequence
Length = 2603
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 1921 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 1980
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1981 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 2040
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 2041 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 2100
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 2101 cagcagctgcggttccc 2117
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 2215 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 2255
>gb|AACV01005055.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005055, whole
genome shotgun sequence
Length = 43973
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 17213 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 17272
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 17273 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 17332
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 17333 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 17392
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 17393 cagcagctgcggttccc 17409
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 17507 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 17547
>ref|XM_467102.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2602
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 1920 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 1979
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1980 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 2039
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 2040 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 2099
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 2100 cagcagctgcggttccc 2116
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 2214 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 2254
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 1579296 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 1579355
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1579356 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 1579415
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1579416 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 1579475
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 1579476 cagcagctgcggttccc 1579492
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 gagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcgg 162
|||||| ||| |||||||||||| || ||||| || || ||||||||||||||
Sbjct: 5321562 gagatcatcaaaggcgagggccatggtagcgctgtcgattggtggaccttcgg 5321614
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 1579590 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 1579630
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1003_B06
Length = 131956
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 14213 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 14272
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 14273 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 14332
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 14333 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 14392
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 14393 cagcagctgcggttccc 14409
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 14507 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 14547
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 176 bits (89), Expect = 9e-042
Identities = 170/197 (86%)
Strand = Plus / Plus
Query: 65 gcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggc 124
|||||||| | ||| ||||| || |||||||||||||| |||||||||||| ||| ||
Sbjct: 12877102 gcgcggtcaatgtccttcgtggggacgcacgagtacctggcgccggagatcatcaagggg 12877161
Query: 125 gagggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctc 184
|| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct: 12877162 gaaggccacggcagcgccgtggactggtggacgttcggcatcttcctccacgagctcctc 12877221
Query: 185 catggcacgacgccgttcaagggggacagcaaccgcgccacgctgtgcaacgtggtcgac 244
| |||| |||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 12877222 tacggcaagacgccgttcaaggggtcgggcaaccgcgccacgctgttcaacgtggtcggg 12877281
Query: 245 cagccgctgcggttccc 261
|||| ||||||||||||
Sbjct: 12877282 cagcagctgcggttccc 12877298
Score = 50.1 bits (25), Expect = 0.001
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 gagatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcgg 162
|||||| ||| |||||||||||| || ||||| || || ||||||||||||||
Sbjct: 16651544 gagatcatcaaaggcgagggccatggtagcgctgtcgattggtggaccttcgg 16651596
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 12877396 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 12877436
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
sequence
Length = 132927
Score = 147 bits (74), Expect = 8e-033
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 104324 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 104383
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 104384 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 104443
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 104444 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 104503
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 104504 caacgtcgtcggccagcagctccggttccc 104533
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 104631 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 104671
>ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative protein kinase
(OSJNBb0089A17.15), mRNA
Length = 1956
Score = 147 bits (74), Expect = 8e-033
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 1389 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 1448
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 1449 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 1508
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 1509 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 1568
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 1569 caacgtcgtcggccagcagctccggttccc 1598
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 1696 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 1736
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 147 bits (74), Expect = 8e-033
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 3595014 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 3595073
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 3595074 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 3595133
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 3595134 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 3595193
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 3595194 caacgtcgtcggccagcagctccggttccc 3595223
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 3595321 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 3595361
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 147 bits (74), Expect = 8e-033
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 21672420 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 21672479
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 21672480 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 21672539
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 21672540 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 21672599
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 21672600 caacgtcgtcggccagcagctccggttccc 21672629
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 21672727 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 21672767
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 147 bits (74), Expect = 8e-033
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 21684083 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 21684142
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 21684143 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 21684202
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 21684203 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 21684262
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 21684263 caacgtcgtcggccagcagctccggttccc 21684292
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 21684390 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 21684430
>dbj|AK064321.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D10, full
insert sequence
Length = 1456
Score = 139 bits (70), Expect = 2e-030
Identities = 175/210 (83%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| | |||||||||||||| ||||||||
Sbjct: 715 ggagccgacgggggcgcggtcgatgtcgttcgtggagacgcacgagtacctggcgccgga 774
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| || || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 775 gatcatcaagggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 834
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 835 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 894
Query: 232 caacgtggtcgaccagccgctgcggttccc 261
|||||| |||| ||||| ||| ||||||||
Sbjct: 895 caacgtcgtcggccagcagctccggttccc 924
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 1022 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 1062
>gb|AACV01022113.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022113, whole
genome shotgun sequence
Length = 91320
Score = 137 bits (69), Expect = 8e-030
Identities = 166/197 (84%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 89867 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 89926
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| ||| || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 89927 gatcatca-aggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 89985
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 89986 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 90045
Query: 232 caacgtggtcgaccagc 248
|||||| |||| |||||
Sbjct: 90046 caacgtcgtcggccagc 90062
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 90173 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 90213
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 137 bits (69), Expect = 8e-030
Identities = 166/197 (84%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 9644931 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 9644990
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| ||| || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 9644991 gatcatca-aggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 9645049
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 9645050 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 9645109
Query: 232 caacgtggtcgaccagc 248
|||||| |||| |||||
Sbjct: 9645110 caacgtcgtcggccagc 9645126
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 9645237 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 9645277
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 137 bits (69), Expect = 8e-030
Identities = 166/197 (84%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 52 ggagccgacggacgcgcggtccacgtcgttcgtcggaacgcacgagtacctcgcgccgga 111
||||||||||| |||||||| | ||||||||| || |||||||||||||| ||||||||
Sbjct: 20510725 ggagccgacgggggcgcggtcgatgtcgttcgtggggacgcacgagtacctggcgccgga 20510784
Query: 112 gatcgtcagaggcgagggccacgggagcgcggtggactggtggaccttcggcatcttcct 171
|||| ||| ||| || || ||||| |||||||||||||||||||| ||||| | |||||
Sbjct: 20510785 gatcatca-aggggaagggcacggcagcgcggtggactggtggacgttcggggtgttcct 20510843
Query: 172 gtacgagctcctccatggcacgacgccgttcaagggggacagcaaccgcgccacgctgtg 231
| |||||||| | | |||| |||||||||||||||| | | ||||| ||||||||||
Sbjct: 20510844 gcacgagctcatgtacggcaggacgccgttcaaggggcagacgaaccgggccacgctgtt 20510903
Query: 232 caacgtggtcgaccagc 248
|||||| |||| |||||
Sbjct: 20510904 caacgtcgtcggccagc 20510920
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 20511031 gagatcaagcagcaccccttcttcgacggcgtcaactgggc 20511071
>gb|AQ860104.1|AQ860104 nbeb0014M05f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0014M05f, DNA sequence
Length = 454
Score = 125 bits (63), Expect = 3e-026
Identities = 105/119 (88%)
Strand = Plus / Minus
Query: 143 gtggactggtggaccttcggcatcttcctgtacgagctcctccatggcacgacgccgttc 202
|||||||||||||| |||||||||||||| ||||||||||| | |||| ||||||||||
Sbjct: 450 gtggactggtggacgttcggcatcttcctccacgagctcctctacggcaagacgccgttc 391
Query: 203 aagggggacagcaaccgcgccacgctgtgcaacgtggtcgaccagccgctgcggttccc 261
|||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct: 390 aaggggtcgggcaaccgcgccacgctgttcaacgtggtcgggcagcagctgcggttccc 332
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 368 gagatcaagcagcacccgttctttgatggggtcaactgggc 408
||||||||||||||||| ||||| || || |||||||||||
Sbjct: 232 gagatcaagcagcaccccttcttcgagggcgtcaactgggc 192
>dbj|AK122055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114K20, full
insert sequence
Length = 1545
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 556 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 615
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 616 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 675
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 676 ggcgtgacgccgttcaagggg 696
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 122901
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Minus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 99367 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 99308
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 99307 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 99248
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 99247 ggcgtgacgccgttcaagggg 99227
>ref|NT_107151.1| Oryza sativa (japonica cultivar-group)
Length = 901339
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 475018 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 475077
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 475078 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 475137
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 475138 ggcgtgacgccgttcaagggg 475158
>gb|AACV01023973.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023973, whole
genome shotgun sequence
Length = 15080
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Minus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 11512 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 11453
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 11452 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 11393
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 11392 ggcgtgacgccgttcaagggg 11372
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2291420 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 2291479
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 2291480 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 2291539
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 2291540 ggcgtgacgccgttcaagggg 2291560
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2291420 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 2291479
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 2291480 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 2291539
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 2291540 ggcgtgacgccgttcaagggg 2291560
Score = 67.9 bits (34), Expect = 6e-009
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 89 acgcacgagtacctcgcgccggagatcgtcagaggcgag-ggccacgggagcgcggtgga 147
|||||||||||||||||||||||| |||| || || ||| |||||||| | || || ||
Sbjct: 20107332 acgcacgagtacctcgcgccggagctcgtgagcgg-gagcggccacggcaacggcgtcga 20107274
Query: 148 ctggtggaccttcggcatcttcctgtacgagctc 181
||||||| |||||||| ||||||| |||||||||
Sbjct: 20107273 ctggtgggccttcggcgtcttcctctacgagctc 20107240
Score = 52.0 bits (26), Expect = 4e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 86 ggaacgcacgagtacctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtg 145
||||| |||||||||||||| || || ||| ||| ||| || || || || || || |||
Sbjct: 14515273 ggaacacacgagtacctcgcaccagaaatcatcaaaggggatggtcatggtagtgctgtg 14515214
Query: 146 gactggtggaccttcggcatcttcct 171
|||||||||||||| ||| |||||||
Sbjct: 14515213 gactggtggacctttggcgtcttcct 14515188
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2444125 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 2444184
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 2444185 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 2444244
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 2444245 ggcgtgacgccgttcaagggg 2444265
Score = 52.0 bits (26), Expect = 4e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 86 ggaacgcacgagtacctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtg 145
||||| |||||||||||||| || || ||| ||| ||| || || || || || || |||
Sbjct: 17669681 ggaacacacgagtacctcgcaccagaaatcatcaaaggggatggtcatggtagtgctgtg 17669622
Query: 146 gactggtggaccttcggcatcttcct 171
|||||||||||||| ||| |||||||
Sbjct: 17669621 gactggtggacctttggcgtcttcct 17669596
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 105 bits (53), Expect = 3e-020
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 68 cggtccacgtcgttcgtcggaacgcacgagtacctcgcgccggagatcgtcagaggcgag 127
||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2444069 cggtccatgtcgttcgtcggcacgcacgagtacctcgcgccggagatcgtctccggcgag 2444128
Query: 128 ggccacgggagcgcggtggactggtggaccttcggcatcttcctgtacgagctcctccat 187
|| ||||| ||| | || ||||||||||| | || | ||| ||| |||||||||| |
Sbjct: 2444129 gggcacggcagctccgtcgactggtggacgctgggggtgttcgtgttcgagctcctctac 2444188
Query: 188 ggcacgacgccgttcaagggg 208
||| ||||||||||||||||
Sbjct: 2444189 ggcgtgacgccgttcaagggg 2444209
Score = 52.0 bits (26), Expect = 4e-004
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 86 ggaacgcacgagtacctcgcgccggagatcgtcagaggcgagggccacgggagcgcggtg 145
||||| |||||||||||||| || || ||| ||| ||| || || || || || || |||
Sbjct: 17624052 ggaacacacgagtacctcgcaccagaaatcatcaaaggggatggtcatggtagtgctgtg 17623993
Query: 146 gactggtggaccttcggcatcttcct 171
|||||||||||||| ||| |||||||
Sbjct: 17623992 gactggtggacctttggcgtcttcct 17623967
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,070,055
Number of Sequences: 438736
Number of extensions: 1070055
Number of successful extensions: 7736
Number of sequences better than 0.5: 136
Number of HSP's better than 0.5 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6425
Number of HSP's gapped (non-prelim): 1257
length of query: 628
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 607
effective length of database: 2,791,206,460
effective search space: 1694262321220
effective search space used: 1694262321220
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)