BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3670912.2.1
(844 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 615 e-173
dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA... 615 e-173
dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA... 615 e-173
dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA... 615 e-173
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 615 e-173
dbj|AP005000.3| Oryza sativa (japonica cultivar-group) geno... 615 e-173
gb|AACV01004956.1| Oryza sativa (japonica cultivar-group) c... 615 e-173
ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA 615 e-173
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 615 e-173
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 615 e-173
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 615 e-173
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 615 e-173
gb|AU094437.1|AU094437 AU094437 Rice panicle at ripening st... 595 e-167
emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) 593 e-167
gb|CB669898.1|CB669898 OSJNEe02L08.r OSJNEe Oryza sativa (j... 545 e-152
gb|CB659237.1|CB659237 OSJNEc16A24.r OSJNEc Oryza sativa (j... 533 e-149
gb|CB659678.1|CB659678 OSJNEc16N19.r OSJNEc Oryza sativa (j... 533 e-149
gb|CB657381.1|CB657381 OSJNEc12K14.r OSJNEc Oryza sativa (j... 513 e-143
gb|CB669077.1|CB669077 OSJNEe01E22.r OSJNEe Oryza sativa (j... 513 e-143
gb|AU057635.1|AU057635 AU057635 Oryza sativa mature leaf Ni... 509 e-142
gb|CB652208.1|CB652208 OSJNEc01N16.r OSJNEc Oryza sativa (j... 509 e-142
gb|CB645553.1|CB645553 OSJNEb07E24.r OSJNEb Oryza sativa (j... 507 e-141
gb|CB653753.1|CB653753 OSJNEc05B05.r OSJNEc Oryza sativa (j... 507 e-141
gb|CB681805.1|CB681805 OSJNEf08H21.r OSJNEf Oryza sativa (j... 507 e-141
gb|CB653461.1|CB653461 OSJNEc04I05.r OSJNEc Oryza sativa (j... 502 e-139
gb|CB676574.1|CB676574 OSJNEe12O09.r OSJNEe Oryza sativa (j... 502 e-139
gb|CB669113.1|CB669113 OSJNEe01F22.r OSJNEe Oryza sativa (j... 500 e-139
gb|AU077482.1|AU077482 AU077482 Rice callus Oryza sativa (j... 494 e-137
gb|CB642653.1|CB642653 OSJNEb02P03.f OSJNEb Oryza sativa (j... 492 e-136
gb|CB681435.1|CB681435 OSJNEf07K17.r OSJNEf Oryza sativa (j... 492 e-136
gb|CB642178.1|CB642178 OSJNEb02D14.r OSJNEb Oryza sativa (j... 474 e-131
gb|CB657989.1|CB657989 OSJNEc13L09.r OSJNEc Oryza sativa (j... 456 e-126
gb|CB653405.1|CB653405 OSJNEc04G09.r OSJNEc Oryza sativa (j... 450 e-124
gb|CB649532.1|CB649532 OSJNEb13I06.r OSJNEb Oryza sativa (j... 436 e-120
gb|CB651041.1|CB651041 OSJNEb15N12.r OSJNEb Oryza sativa (j... 414 e-113
gb|AU093114.1|AU093114 AU093114 Rice callus Oryza sativa (j... 402 e-109
gb|CB669311.1|CB669311 OSJNEe01L07.r OSJNEe Oryza sativa (j... 387 e-105
gb|C73769.1|C73769 C73769 Rice panicle (longer than 10cm) O... 379 e-102
gb|CD670650.1|CD670650 OsMR065 5MT resistant rice mutant cD... 369 2e-099
gb|CB644633.1|CB644633 OSJNEb05O24.r OSJNEb Oryza sativa (j... 367 7e-099
gb|CB648738.1|CB648738 OSJNEb12E11.r OSJNEb Oryza sativa (j... 367 7e-099
gb|CB685188.1|CB685188 OSJNEf15G11.r OSJNEf Oryza sativa (j... 365 3e-098
gb|AC135429.2| Oryza sativa (japonica cultivar-group) chrom... 331 4e-088
gb|AC135419.2| Oryza sativa (japonica cultivar-group) chrom... 331 4e-088
gb|AACV01012226.1| Oryza sativa (japonica cultivar-group) c... 331 4e-088
ref|XM_475254.1| Oryza sativa (japonica cultivar-group), p... 331 4e-088
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 331 4e-088
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 331 4e-088
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 331 4e-088
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 331 4e-088
gb|CB674106.1|CB674106 OSJNEe09A02.f OSJNEe Oryza sativa (j... 325 2e-086
gb|CB651373.1|CB651373 OSJNEb16E22.r OSJNEb Oryza sativa (j... 323 9e-086
gb|CB637634.1|CB637634 OSJNEa04J11.r OSJNEa Oryza sativa (j... 317 5e-084
gb|CB640858.1|CB640858 OSJNEa16L04.f OSJNEa Oryza sativa (j... 317 5e-084
gb|CB636590.1|CB636590 OSJNEa02E05.r OSJNEa Oryza sativa (j... 315 2e-083
gb|CB636425.1|CB636425 OSJNEa01O16.r OSJNEa Oryza sativa (j... 309 1e-081
gb|CB681156.1|CB681156 OSJNEf07A21.r OSJNEf Oryza sativa (j... 309 1e-081
gb|CB636555.1|CB636555 OSJNEa02C24.r OSJNEa Oryza sativa (j... 289 1e-075
gb|CB638890.1|CB638890 OSJNEa07M20.f OSJNEa Oryza sativa (j... 281 3e-073
gb|CB648650.1|CB648650 OSJNEb12C09.r OSJNEb Oryza sativa (j... 280 1e-072
gb|C23630.1|C23630 C23630 Rice shoot Oryza sativa (japonica... 276 2e-071
gb|AZ125852.1|AZ125852 OSJNBb0095N21f CUGI Rice BAC Library... 272 3e-070
gb|D49142.1|D49142 RICS15832A Rice green shoot Oryza sativa... 244 6e-062
gb|AU032521.1|AU032521 AU032521 Rice green shoot Oryza sati... 242 3e-061
ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA 240 1e-060
gb|CA998134.1|CA998134 S345A_D07 Rice cold stress germinati... 230 1e-057
dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA... 230 1e-057
gb|AACV01012472.1| Oryza sativa (japonica cultivar-group) c... 230 1e-057
ref|XM_473196.1| Oryza sativa (japonica cultivar-group), p... 230 1e-057
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 230 1e-057
emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromoso... 230 1e-057
emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromoso... 230 1e-057
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 230 1e-057
dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA... 220 9e-055
gb|AY224546.1| Oryza sativa (japonica cultivar-group) isola... 220 9e-055
gb|AACV01010128.1| Oryza sativa (japonica cultivar-group) c... 220 9e-055
ref|XM_473192.1| Oryza sativa (japonica cultivar-group), p... 220 9e-055
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 220 9e-055
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 220 9e-055
gb|AZ047028.1|AZ047028 nbeb0092C03r CUGI Rice BAC Library (... 214 6e-053
dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA... 214 6e-053
ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA 214 6e-053
gb|CB675503.1|CB675503 OSJNEe11E14.r OSJNEe Oryza sativa (j... 210 9e-052
gb|CF326479.1|CF326479 JMT1--06-C22.g1 AtJMT-overexpressing... 210 9e-052
emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC O... 210 9e-052
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 210 9e-052
gb|AACV01025087.1| Oryza sativa (japonica cultivar-group) c... 210 9e-052
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 210 9e-052
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 210 9e-052
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 210 9e-052
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 210 9e-052
gb|AU173212.1|AU173212 AU173212 Rice root Oryza sativa (jap... 208 4e-051
gb|CB652985.1|CB652985 OSJNEc03J06.r OSJNEc Oryza sativa (j... 204 6e-050
gb|AU088730.1|AU088730 AU088730 Rice shoot Oryza sativa (ja... 202 2e-049
gb|CB636708.1|CB636708 OSJNEa02I04.r OSJNEa Oryza sativa (j... 202 2e-049
gb|CB671834.1|CB671834 OSJNEe05J10.r OSJNEe Oryza sativa (j... 202 2e-049
gb|CB638153.1|CB638153 OSJNEa06C04.r OSJNEa Oryza sativa (j... 200 9e-049
gb|CB645487.1|CB645487 OSJNEb07D04.r OSJNEb Oryza sativa (j... 200 9e-049
gb|CB647570.1|CB647570 OSJNEb10I21.r OSJNEb Oryza sativa (j... 200 9e-049
gb|AU093122.1|AU093122 AU093122 Rice callus Oryza sativa (j... 198 3e-048
gb|AU095998.1|AU095998 AU095998 Rice green shoot Oryza sati... 198 3e-048
emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC O... 198 3e-048
ref|NT_107149.1| Oryza sativa (japonica cultivar-group) 198 3e-048
gb|AACV01029719.1| Oryza sativa (japonica cultivar-group) C... 198 3e-048
gb|CB652207.1|CB652207 OSJNEc01N16.f OSJNEc Oryza sativa (j... 194 5e-047
gb|CB653757.1|CB653757 OSJNEc05B10.f OSJNEc Oryza sativa (j... 188 3e-045
gb|CB681155.1|CB681155 OSJNEf07A21.f OSJNEf Oryza sativa (j... 188 3e-045
gb|AU068509.1|AU068509 AU068509 Rice callus Oryza sativa (j... 186 1e-044
gb|AU164571.1|AU164571 AU164571 Rice root Oryza sativa (jap... 186 1e-044
gb|CB654910.1|CB654910 OSJNEc07M20.r OSJNEc Oryza sativa (j... 186 1e-044
gb|AACV01025770.1| Oryza sativa (japonica cultivar-group) C... 186 1e-044
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 186 1e-044
gb|AC133008.3| Oryza sativa (japonica cultivar-group) chrom... 186 1e-044
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 186 1e-044
gb|AZ045912.1|AZ045912 nbeb0087N08r CUGI Rice BAC Library (... 178 3e-042
gb|CB638491.1|CB638491 OSJNEa06N12.r OSJNEa Oryza sativa (j... 174 5e-041
gb|CB637243.1|CB637243 OSJNEa03J13.r OSJNEa Oryza sativa (j... 167 1e-038
gb|CB651641.1|CB651641 OSJNEb16K22.r OSJNEb Oryza sativa (j... 167 1e-038
gb|C74752.1|C74752 C74752 Rice cDNA from immature leaf incl... 163 2e-037
gb|AU095994.1|AU095994 AU095994 Rice green shoot Oryza sati... 163 2e-037
gb|CB669574.1|CB669574 OSJNEe02C17.r OSJNEe Oryza sativa (j... 163 2e-037
gb|AU162848.1|AU162848 AU162848 Rice green shoot Oryza sati... 157 1e-035
gb|CB658820.1|CB658820 OSJNEc15C16.r OSJNEc Oryza sativa (j... 149 3e-033
gb|AU096038.1|AU096038 AU096038 Rice green shoot Oryza sati... 143 2e-031
gb|AU162543.1|AU162543 AU162543 Rice root Oryza sativa (jap... 141 7e-031
gb|D48408.1|D48408 RICS14586A Rice green shoot Oryza sativa... 137 1e-029
gb|D46788.1|D46788 RICS11679A Rice green shoot Oryza sativa... 133 2e-028
gb|AU071030.1|AU071030 AU071030 Rice cDNA from young root O... 133 2e-028
gb|AU162846.1|AU162846 AU162846 Rice green shoot Oryza sati... 133 2e-028
gb|AU096225.1|AU096225 AU096225 Rice green shoot Oryza sati... 127 1e-026
gb|CB648737.1|CB648737 OSJNEb12E11.f OSJNEb Oryza sativa (j... 125 4e-026
gb|C24995.1|C24995 C24995 Rice green shoot Oryza sativa (ja... 119 3e-024
gb|CB647883.1|CB647883 OSJNEb11A04.r OSJNEb Oryza sativa (j... 113 2e-022
gb|AU164570.1|AU164570 AU164570 Rice root Oryza sativa (jap... 111 6e-022
gb|CV723818.1|CV723818 root--04-O02.g1 Rice root lambda pha... 111 6e-022
gb|AU056034.1|AU056034 AU056034 Oryza sativa mature leaf Ni... 109 2e-021
gb|AU085981.1|AU085981 AU085981 Rice root Oryza sativa (jap... 109 2e-021
gb|AU164539.1|AU164539 AU164539 Rice root Oryza sativa (jap... 109 2e-021
gb|AU164589.1|AU164589 AU164589 Rice root Oryza sativa (jap... 109 2e-021
gb|AU181319.1|AU181319 AU181319 Rice callus (2001) Oryza sa... 109 2e-021
gb|AU182491.1|AU182491 AU182491 Rice panicle at flowering s... 109 2e-021
gb|AU222862.1|AU222862 AU222862 Rice shoot Oryza sativa (ja... 109 2e-021
gb|CB636312.1|CB636312 OSJNEa01K12.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB636728.1|CB636728 OSJNEa02I19.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB636866.1|CB636866 OSJNEa02N08.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB637604.1|CB637604 OSJNEa04I08.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB637937.1|CB637937 OSJNEa05H24.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB638108.1|CB638108 OSJNEa06A14.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB638564.1|CB638564 OSJNEa06P16.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB639054.1|CB639054 OSJNEa08D24.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB639093.1|CB639093 OSJNEa08F23.r OSJNEa Oryza sativa (j... 109 2e-021
gb|CB642069.1|CB642069 OSJNEb02A20.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB642117.1|CB642117 OSJNEb02C04.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB642175.1|CB642175 OSJNEb02D12.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB642217.1|CB642217 OSJNEb02E14.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB642603.1|CB642603 OSJNEb02N20.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643172.1|CB643172 OSJNEb03L13.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643227.1|CB643227 OSJNEb03M19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643365.1|CB643365 OSJNEb04A09.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643432.1|CB643432 OSJNEb04B22.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643575.1|CB643575 OSJNEb04F12.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643669.1|CB643669 OSJNEb04H20.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB643685.1|CB643685 OSJNEb04I05.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB644196.1|CB644196 OSJNEb05E18.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB644341.1|CB644341 OSJNEb05I03.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB644342.1|CB644342 OSJNEb05I03.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645014.1|CB645014 OSJNEb06H14.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645148.1|CB645148 OSJNEb06K19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645276.1|CB645276 OSJNEb06N17.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645537.1|CB645537 OSJNEb07E15.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645544.1|CB645544 OSJNEb07E19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645768.1|CB645768 OSJNEb07L13.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645971.1|CB645971 OSJNEb08B09.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB645973.1|CB645973 OSJNEb08B10.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646404.1|CB646404 OSJNEb08N20.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646519.1|CB646519 OSJNEb09A23.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646558.1|CB646558 OSJNEb09B19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646611.1|CB646611 OSJNEb09D02.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646702.1|CB646702 OSJNEb09F03.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB646810.1|CB646810 OSJNEb09H14.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647024.1|CB647024 OSJNEb09M09.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647025.1|CB647025 OSJNEb09M09.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647083.1|CB647083 OSJNEb09N15.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647110.1|CB647110 OSJNEb09O06.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647160.1|CB647160 OSJNEb09P15.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647588.1|CB647588 OSJNEb10J07.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647866.1|CB647866 OSJNEb10P19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB647939.1|CB647939 OSJNEb11B13.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB648357.1|CB648357 OSJNEb11L09.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB648581.1|CB648581 OSJNEb12A16.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB648840.1|CB648840 OSJNEb12H01.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB648857.1|CB648857 OSJNEb12H12.f OSJNEb Oryza sativa (j... 109 2e-021
gb|CB648858.1|CB648858 OSJNEb12H12.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB649453.1|CB649453 OSJNEb13G05.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB649510.1|CB649510 OSJNEb13H16.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB649635.1|CB649635 OSJNEb13L03.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB649871.1|CB649871 OSJNEb14A19.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB649951.1|CB649951 OSJNEb14C15.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB650213.1|CB650213 OSJNEb14I17.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB650550.1|CB650550 OSJNEb15A24.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB650759.1|CB650759 OSJNEb15G07.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB650840.1|CB650840 OSJNEb15I09.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB650919.1|CB650919 OSJNEb15K08.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651080.1|CB651080 OSJNEb15O10.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651132.1|CB651132 OSJNEb15P18.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651195.1|CB651195 OSJNEb16B03.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651561.1|CB651561 OSJNEb16J03.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651645.1|CB651645 OSJNEb16K24.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651793.1|CB651793 OSJNEb16O11.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB651845.1|CB651845 OSJNEb16P15.r OSJNEb Oryza sativa (j... 109 2e-021
gb|CB652036.1|CB652036 OSJNEc01G17.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652063.1|CB652063 OSJNEc01I02.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652392.1|CB652392 OSJNEc02D23.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652464.1|CB652464 OSJNEc02H09.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652516.1|CB652516 OSJNEc02J05.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652776.1|CB652776 OSJNEc03C10.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652909.1|CB652909 OSJNEc03G16.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652910.1|CB652910 OSJNEc03G16.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB652939.1|CB652939 OSJNEc03H17.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB653326.1|CB653326 OSJNEc04D21.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB653810.1|CB653810 OSJNEc05D01.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654302.1|CB654302 OSJNEc06G13.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654479.1|CB654479 OSJNEc07A17.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654599.1|CB654599 OSJNEc07E03.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654729.1|CB654729 OSJNEc07H19.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654842.1|CB654842 OSJNEc07K17.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB654843.1|CB654843 OSJNEc07K17.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB655542.1|CB655542 OSJNEc09B08.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB655928.1|CB655928 OSJNEc09L22.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB655969.1|CB655969 OSJNEc09M24.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656032.1|CB656032 OSJNEc09O20.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656058.1|CB656058 OSJNEc09P12.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656222.1|CB656222 OSJNEc10E23.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656261.1|CB656261 OSJNEc10G11.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656851.1|CB656851 OSJNEc11K07.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB656982.1|CB656982 OSJNEc11P04.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB657039.1|CB657039 OSJNEc12B02.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB657911.1|CB657911 OSJNEc13J07.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB658057.1|CB658057 OSJNEc13N04.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB658500.1|CB658500 OSJNEc14J04.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB659254.1|CB659254 OSJNEc16B09.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB659342.1|CB659342 OSJNEc16D18.f OSJNEc Oryza sativa (j... 109 2e-021
gb|CB665748.1|CB665748 OSJNEd12F09.r OSJNEd Oryza sativa (j... 109 2e-021
gb|CB669736.1|CB669736 OSJNEe02H06.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB670024.1|CB670024 OSJNEe02O09.f OSJNEe Oryza sativa (j... 109 2e-021
gb|CB670226.1|CB670226 OSJNEe03D06.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB671356.1|CB671356 OSJNEe04O09.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB672295.1|CB672295 OSJNEe06E04.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB672849.1|CB672849 OSJNEe07B19.f OSJNEe Oryza sativa (j... 109 2e-021
gb|CB672880.1|CB672880 OSJNEe07C11.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB673162.1|CB673162 OSJNEe07J03.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB673840.1|CB673840 OSJNEe08J07.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB673937.1|CB673937 OSJNEe08L15.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB674217.1|CB674217 OSJNEe09C13.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB674353.1|CB674353 OSJNEe09F19.f OSJNEe Oryza sativa (j... 109 2e-021
gb|CB674354.1|CB674354 OSJNEe09F19.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB674541.1|CB674541 OSJNEe09K05.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB675131.1|CB675131 OSJNEe10K11.f OSJNEe Oryza sativa (j... 109 2e-021
gb|CB675573.1|CB675573 OSJNEe11G11.f OSJNEe Oryza sativa (j... 109 2e-021
gb|CB675574.1|CB675574 OSJNEe11G11.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB675925.1|CB675925 OSJNEe11O18.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB676168.1|CB676168 OSJNEe12E12.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB676326.1|CB676326 OSJNEe12I06.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB676786.1|CB676786 OSJNEe13D22.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB676819.1|CB676819 OSJNEe13E19.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB676832.1|CB676832 OSJNEe13F03.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB677023.1|CB677023 OSJNEe13J19.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB677613.1|CB677613 OSJNEe14M06.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB677911.1|CB677911 OSJNEe15F17.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB678128.1|CB678128 OSJNEe15L18.r OSJNEe Oryza sativa (j... 109 2e-021
gb|CB680425.1|CB680425 OSJNEf05B22.r OSJNEf Oryza sativa (j... 109 2e-021
gb|CB682139.1|CB682139 OSJNEf09B18.r OSJNEf Oryza sativa (j... 109 2e-021
gb|CB684738.1|CB684738 OSJNEf14I21.r OSJNEf Oryza sativa (j... 109 2e-021
dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA... 109 2e-021
dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA... 109 2e-021
ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA 109 2e-021
emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyas... 109 2e-021
gb|D48717.1|D48717 RICS15104A Rice green shoot Oryza sativa... 105 4e-020
gb|AU162068.1|AU162068 AU162068 Rice green shoot Oryza sati... 105 4e-020
gb|AU165572.1|AU165572 AU165572 Rice panicle at flowering s... 105 4e-020
gb|CB644632.1|CB644632 OSJNEb05O24.f OSJNEb Oryza sativa (j... 105 4e-020
gb|CB670400.1|CB670400 OSJNEe03H05.f OSJNEe Oryza sativa (j... 103 2e-019
gb|CB670401.1|CB670401 OSJNEe03H05.r OSJNEe Oryza sativa (j... 103 2e-019
gb|CB650479.1|CB650479 OSJNEb14P03.r OSJNEb Oryza sativa (j... 101 6e-019
gb|CB670153.1|CB670153 OSJNEe03B15.r OSJNEe Oryza sativa (j... 101 6e-019
gb|CB675170.1|CB675170 OSJNEe10L11.r OSJNEe Oryza sativa (j... 101 6e-019
dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA... 101 6e-019
gb|C73182.1|C73182 C73182 Rice panicle at flowering stage O... 98 9e-018
gb|CB639398.1|CB639398 OSJNEa10G16.f OSJNEa Oryza sativa (j... 98 9e-018
gb|CB644197.1|CB644197 OSJNEb05E18.r OSJNEb Oryza sativa (j... 98 9e-018
gb|CB654092.1|CB654092 OSJNEc05L20.f OSJNEc Oryza sativa (j... 98 9e-018
gb|CB658819.1|CB658819 OSJNEc15C16.f OSJNEc Oryza sativa (j... 98 9e-018
gb|AU162573.1|AU162573 AU162573 Rice cDNA from young root O... 94 1e-016
gb|AU182330.1|AU182330 AU182330 Rice panicle at flowering s... 94 1e-016
gb|AU184157.1|AU184157 AU184157 Rice root Oryza sativa (jap... 94 1e-016
gb|AU184281.1|AU184281 AU184281 Rice root Oryza sativa (jap... 94 1e-016
gb|CB648325.1|CB648325 OSJNEb11K12.r OSJNEb Oryza sativa (j... 94 1e-016
gb|CB671378.1|CB671378 OSJNEe04O21.r OSJNEe Oryza sativa (j... 94 1e-016
gb|CV722616.1|CV722616 root--01-A21.g1 Rice root lambda pha... 94 1e-016
gb|AU162866.1|AU162866 AU162866 Rice green shoot Oryza sati... 92 6e-016
gb|AU181439.1|AU181439 AU181439 Rice callus (2001) Oryza sa... 92 6e-016
gb|AU182307.1|AU182307 AU182307 Rice panicle at flowering s... 92 6e-016
gb|AU182313.1|AU182313 AU182313 Rice panicle at flowering s... 92 6e-016
gb|AU182364.1|AU182364 AU182364 Rice panicle at flowering s... 92 6e-016
gb|AU184638.1|AU184638 AU184638 Rice root Oryza sativa (jap... 92 6e-016
gb|AU184731.1|AU184731 AU184731 Rice root Oryza sativa (jap... 92 6e-016
gb|AU198030.1|AU198030 AU198030 Rice green shoot Oryza sati... 92 6e-016
gb|CB639149.1|CB639149 OSJNEa08I22.r OSJNEa Oryza sativa (j... 92 6e-016
gb|CV721009.1|CV721009 YBH--02-J08.b1 Rice before heading y... 92 6e-016
gb|C19635.2|C19635 C19635 Rice panicle at ripening stage Or... 92 6e-016
gb|AU070743.1|AU070743 AU070743 Rice cDNA from young root O... 90 2e-015
gb|CB658502.1|CB658502 OSJNEc14J06.r OSJNEc Oryza sativa (j... 90 2e-015
gb|D39593.1|D39593 RICS1092A Rice shoot Oryza sativa (japon... 86 4e-014
gb|AU108112.1|AU108112 AU108112 Rice callus Oryza sativa (j... 86 4e-014
gb|AU184703.1|AU184703 AU184703 Rice root Oryza sativa (jap... 86 4e-014
gb|AU197844.1|AU197844 AU197844 Rice green shoot Oryza sati... 86 4e-014
gb|CB641937.1|CB641937 OSJNEb01N14.r OSJNEb Oryza sativa (j... 86 4e-014
gb|CB652062.1|CB652062 OSJNEc01I02.f OSJNEc Oryza sativa (j... 86 4e-014
gb|CB672002.1|CB672002 OSJNEe05N06.r OSJNEe Oryza sativa (j... 86 4e-014
gb|CB676831.1|CB676831 OSJNEe13F03.f OSJNEe Oryza sativa (j... 86 4e-014
gb|CB678695.1|CB678695 OSJNEf01C14.r OSJNEf Oryza sativa (j... 86 4e-014
gb|AU032781.1|AU032781 AU032781 Rice green shoot Oryza sati... 84 1e-013
gb|CB637606.1|CB637606 OSJNEa04I10.r OSJNEa Oryza sativa (j... 84 1e-013
gb|CV721703.1|CV721703 YBH--05-A12.b1 Rice before heading y... 84 1e-013
dbj|AP005693.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
dbj|AP006480.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01018010.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
dbj|BA000044.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 84 1e-013
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AY360389.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|AY360388.2| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|AU165415.1|AU165415 AU165415 Rice panicle at flowering s... 78 9e-012
gb|CB669880.1|CB669880 OSJNEe02K22.f OSJNEe Oryza sativa (j... 74 1e-010
gb|AU031420.1|AU031420 AU031420 Rice cDNA from immature lea... 72 5e-010
gb|CV720713.1|CV720713 YBH--01-J06.b1 Rice before heading y... 72 5e-010
gb|CB640410.1|CB640410 OSJNEa14L19.f OSJNEa Oryza sativa (j... 70 2e-009
gb|AU165450.1|AU165450 AU165450 Rice panicle at flowering s... 68 8e-009
gb|CB637043.1|CB637043 OSJNEa03C17.r OSJNEa Oryza sativa (j... 68 8e-009
gb|AU164538.1|AU164538 AU164538 Rice root Oryza sativa (jap... 66 3e-008
gb|CB643668.1|CB643668 OSJNEb04H20.f OSJNEb Oryza sativa (j... 66 3e-008
gb|CB647587.1|CB647587 OSJNEb10J07.f OSJNEb Oryza sativa (j... 66 3e-008
gb|CB648324.1|CB648324 OSJNEb11K12.f OSJNEb Oryza sativa (j... 66 3e-008
gb|CB652515.1|CB652515 OSJNEc02J05.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB652741.1|CB652741 OSJNEc03A23.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB653408.1|CB653408 OSJNEc04G11.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB654093.1|CB654093 OSJNEc05L20.r OSJNEc Oryza sativa (j... 66 3e-008
gb|CB654728.1|CB654728 OSJNEc07H19.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB656221.1|CB656221 OSJNEc10E23.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB656981.1|CB656981 OSJNEc11P04.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB658056.1|CB658056 OSJNEc13N04.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CB658396.1|CB658396 OSJNEc14G12.f OSJNEc Oryza sativa (j... 66 3e-008
gb|CF303922.1|CF303922 ABF1--03-J13.g1 ABF3-overexpressing ... 66 3e-008
gb|CV721436.1|CV721436 YBH--04-C02.b1 Rice before heading y... 66 3e-008
gb|C72993.1|C72993 C72993 Rice panicle at flowering stage O... 62 5e-007
gb|CB642558.1|CB642558 OSJNEb02M20.r OSJNEb Oryza sativa (j... 58 8e-006
gb|C97173.1|C97173 C97173 Rice callus Oryza sativa (japonic... 56 3e-005
gb|C97420.1|C97420 C97420 Rice callus Oryza sativa (japonic... 56 3e-005
gb|CO435760.1|CO435760 OsMR826 5MT resistant rice mutant cD... 56 3e-005
gb|C28859.1|C28859 C28859 Rice callus cDNA Oryza sativa (ja... 52 5e-004
gb|CB636486.1|CB636486 OSJNEa02A20.r OSJNEa Oryza sativa (j... 52 5e-004
gb|CB653809.1|CB653809 OSJNEc05D01.f OSJNEc Oryza sativa (j... 52 5e-004
gb|CA997981.1|CA997981 S234D1_C11 Rice cold stress germinat... 50 0.002
gb|CB675924.1|CB675924 OSJNEe11O18.f OSJNEe Oryza sativa (j... 50 0.002
gb|AU095864.1|AU095864 AU095864 Rice green shoot Oryza sati... 46 0.031
emb|AL713941.3|CNS07YP9 Oryza sativa chromosome 12, . BAC O... 44 0.12
emb|AL772413.6|CNS08C9R Oryza sativa (japonica cultivar-gro... 44 0.12
gb|AACV01024852.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
>dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0656G12, ***
SEQUENCING IN PROGRESS ***
Length = 154494
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 142182 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 142123
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 142122 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 142063
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 142062 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 142005
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 142004 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 141946
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 141945 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 141886
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 141885 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 141826
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 141825 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 141766
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 141765 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 141706
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 141705 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 141646
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 141645 aatggcgcgccactgccactctgctga 141619
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 149373 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 149314
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149313 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 149254
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 149253 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 149194
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 149193 aacggcgcgcccctgcc 149177
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 129984 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 129925
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 129924 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 129865
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 129864 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 129810
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 130268 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 130210
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 130209 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 130151
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 130150 gtcgagcacgc 130140
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 149607 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 149549
Query: 189 gcagaa 194
| ||||
Sbjct: 149548 gaagaa 149543
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 149472 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 149426
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full
insert sequence
Length = 1589
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 700 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 759
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 760 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 819
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 820 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 877
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 878 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 936
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 937 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 996
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 997 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 1056
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 1057 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 1116
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1117 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 1176
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1177 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 1236
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 1237 aatggcgcgccactgccactctgctga 1263
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full
insert sequence
Length = 1835
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 984 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 1043
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 1044 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 1103
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 1104 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 1161
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 1162 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 1220
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1221 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 1280
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 1281 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 1340
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 1341 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 1400
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1401 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 1460
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1461 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 1520
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 1521 aatggcgcgccactgccactctgctga 1547
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full
insert sequence
Length = 2594
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 1743 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 1802
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 1803 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 1862
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 1863 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 1920
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 1921 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 1979
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1980 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 2039
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 2040 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 2099
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 2100 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 2159
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2160 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 2219
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 2220 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 2279
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 2280 aatggcgcgccactgccactctgctga 2306
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1215B07
Length = 165957
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 165921 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 165862
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 165861 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 165802
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 165801 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 165744
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 165743 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 165685
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 165684 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 165625
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 165624 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 165565
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 165564 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 165505
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 165504 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 165445
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 165444 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 165385
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 165384 aatggcgcgccactgccactctgctga 165358
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 153723 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 153664
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 153663 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 153604
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 153603 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 153549
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 154007 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 153949
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 153948 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 153890
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 153889 gtcgagcacgc 153879
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0042D01
Length = 148305
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 17626 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 17567
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 17566 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 17507
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 17506 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 17449
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 17448 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 17390
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 17389 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 17330
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 17329 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 17270
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 17269 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 17210
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17209 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 17150
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 17149 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 17090
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 17089 aatggcgcgccactgccactctgctga 17063
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 24817 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 24758
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 24757 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 24698
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 24697 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 24638
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 24637 aacggcgcgcccctgcc 24621
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 38397 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 38338
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 38337 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 38278
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 38277 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 38218
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 38217 ccaatctgctga 38206
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 5428 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 5369
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 5368 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 5309
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 5308 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 5254
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 38679 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 38621
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 38620 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 38582
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 5712 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 5654
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 5653 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 5595
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 5594 gtcgagcacgc 5584
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 25051 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 24993
Query: 189 gcagaa 194
| ||||
Sbjct: 24992 gaagaa 24987
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 24916 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 24870
>gb|AACV01004956.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004956, whole
genome shotgun sequence
Length = 40976
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 17725 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 17666
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 17665 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 17606
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 17605 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 17548
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 17547 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 17489
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 17488 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 17429
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 17428 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 17369
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 17368 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 17309
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 17308 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 17249
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 17248 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 17189
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 17188 aatggcgcgccactgccactctgctga 17162
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 24916 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 24857
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 24856 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 24797
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 24796 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 24737
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 24736 aacggcgcgcccctgcc 24720
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 38496 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 38437
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 38436 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 38377
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 38376 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 38317
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 38316 ccaatctgctga 38305
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 5526 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 5467
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 5466 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 5407
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 5406 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 5352
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 38778 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 38720
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 38719 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 38681
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 5810 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 5752
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 5751 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 5693
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 5692 gtcgagcacgc 5682
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 25150 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 25092
Query: 189 gcagaa 194
| ||||
Sbjct: 25091 gaagaa 25086
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 25015 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 24969
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2369
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 1743 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 1802
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 1803 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 1862
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 1863 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 1920
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 1921 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 1979
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1980 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 2039
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 2040 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 2099
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 2100 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 2159
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2160 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 2219
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 2220 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 2279
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 2280 aatggcgcgccactgccactctgctga 2306
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 169637 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 169578
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 169577 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 169518
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 169517 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 169460
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 169459 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 169401
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 169400 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 169341
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 169340 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 169281
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 169280 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 169221
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 169220 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 169161
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 169160 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 169101
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 169100 aatggcgcgccactgccactctgctga 169074
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 176828 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 176769
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 176768 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 176709
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 176708 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 176649
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 176648 aacggcgcgcccctgcc 176632
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 190408 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 190349
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 190348 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 190289
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 190288 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 190229
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 190228 ccaatctgctga 190217
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 157439 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 157380
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 157379 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 157320
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 157319 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 157265
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 190690 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 190632
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 190631 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 190593
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 157723 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 157665
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 157664 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 157606
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 157605 gtcgagcacgc 157595
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 177062 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 177004
Query: 189 gcagaa 194
| ||||
Sbjct: 177003 gaagaa 176998
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 176927 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 176881
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 11341076 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 11341017
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 11341016 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 11340957
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 11340956 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 11340899
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 11340898 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 11340840
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11340839 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 11340780
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 11340779 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 11340720
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 11340719 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 11340660
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11340659 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 11340600
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 11340599 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 11340540
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 11340539 aatggcgcgccactgccactctgctga 11340513
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 11348267 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 11348208
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11348207 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 11348148
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 11348147 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 11348088
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 11348087 aacggcgcgcccctgcc 11348071
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 11361847 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 11361788
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 11361787 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 11361728
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11361727 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 11361668
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 11361667 ccaatctgctga 11361656
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 11328877 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 11328818
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 11328817 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 11328758
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 11328757 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 11328703
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 11362129 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 11362071
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 11362070 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 11362032
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 11329161 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 11329103
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 11329102 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 11329044
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 11329043 gtcgagcacgc 11329033
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 11348501 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 11348443
Query: 189 gcagaa 194
| ||||
Sbjct: 11348442 gaagaa 11348437
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 11348366 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 11348320
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 24794140 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 24794081
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 24794080 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 24794021
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 24794020 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 24793963
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 24793962 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 24793904
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 24793903 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 24793844
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 24793843 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 24793784
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 24793783 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 24793724
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 24793723 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 24793664
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 24793663 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 24793604
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 24793603 aatggcgcgccactgccactctgctga 24793577
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 24801331 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 24801272
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 24801271 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 24801212
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 24801211 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 24801152
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 24801151 aacggcgcgcccctgcc 24801135
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 24814911 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 24814852
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 24814851 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 24814792
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 24814791 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 24814732
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 24814731 ccaatctgctga 24814720
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 24781941 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 24781882
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 24781881 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 24781822
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 24781821 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 24781767
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 24815193 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 24815135
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 24815134 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 24815096
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 24782225 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 24782167
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 24782166 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 24782108
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 24782107 gtcgagcacgc 24782097
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 24801565 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 24801507
Query: 189 gcagaa 194
| ||||
Sbjct: 24801506 gaagaa 24801501
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 24801430 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 24801384
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 615 bits (310), Expect = e-173
Identities = 507/567 (89%), Gaps = 5/567 (0%)
Strand = Plus / Minus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 25004638 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 25004579
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 25004578 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 25004519
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 25004518 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 25004461
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 25004460 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 25004402
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25004401 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 25004342
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 25004341 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 25004282
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 25004281 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 25004222
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 25004221 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 25004162
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 25004161 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 25004102
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 25004101 aatggcgcgccactgccactctgctga 25004075
Score = 240 bits (121), Expect = 1e-060
Identities = 178/197 (90%)
Strand = Plus / Minus
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||||| |||| |||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 25011829 cccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctc 25011770
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|| |||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 25011769 ggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 25011710
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||||| |||||||||| || |||||||| ||||| ||||||||||||
Sbjct: 25011709 ctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtgg 25011650
Query: 545 aacggcgagcccctgcc 561
||||||| |||||||||
Sbjct: 25011649 aacggcgcgcccctgcc 25011633
Score = 214 bits (108), Expect = 6e-053
Identities = 171/192 (89%)
Strand = Plus / Minus
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||| |||| || ||||| ||||||||||||||||||||| |||| || ||||||||
Sbjct: 25025409 gagtgcaggtcgtatccgctctaccggttcgtgcgcgaggagctcggaacaaagtacctg 25025350
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
|||||||||||||| | ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct: 25025349 accggcgagaagacacgatcgcctggcgaggagctgaacaaggttcttgtggctatcaac 25025290
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 25025289 gaaggcaagcacatcgacccgttgctcgagtgcctcaaggagtggaacggcgagcccctg 25025230
Query: 560 ccgctctgctga 571
|| ||||||||
Sbjct: 25025229 ccaatctgctga 25025218
Score = 109 bits (55), Expect = 2e-021
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 384 gccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccg 443
||||||| | |||||| ||||| ||||| ||||||||| ||||| || | ||| ||||
Sbjct: 24992440 gccggtcgttcccgctctaccgcttcgtccgcgaggagctcggctgcgtattcctcaccg 24992381
Query: 444 gcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagc 503
|||||||| | ||| |||||||||||| ||||||||| || | | ||||| ||||
Sbjct: 24992380 gcgagaagctcaagtcccccggcgaggagtgcaacaaggtgttcctcggcatcagccagg 24992321
Query: 504 gcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccct 558
|||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 24992320 gcaagctcatcgaccccatgctcgactgcctcaaggagtggaacggcgagcccct 24992266
Score = 97.6 bits (49), Expect = 9e-018
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | || |||| ||||||||||||||||| |||||||
Sbjct: 25025691 cgcttctgcgagaaggacctgctcaaggagatc-gaccgcgaggcggtgttcgcgtacgc 25025633
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaa 194
||||||||||||||| || ||||||| |||||||| ||||
Sbjct: 25025632 ggacgacccgtgcag-ccacaactacccgctgatgaagaa 25025594
Score = 65.9 bits (33), Expect = 3e-008
Identities = 108/131 (82%), Gaps = 2/131 (1%)
Strand = Plus / Minus
Query: 91 cgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgt 150
|||||||||| |||||||| |||| | || || ||| ||||||||||| ||||| |
Sbjct: 24992724 cgcgcgcttcagcgagaagaacctcctcaccgccatc-gaccgcgaggccgtgttcagct 24992666
Query: 151 acgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctg 210
| || ||||||||||||||| || |||||| |||| |||||||| ||||||| |||||
Sbjct: 24992665 atgccgacgacccgtgcagcgcc-aactacccgctcatgcagaagctccgcgccgtgctc 24992607
Query: 211 gtcgagcacgc 221
|||||||||||
Sbjct: 24992606 gtcgagcacgc 24992596
Score = 54.0 bits (27), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
|||||||| || ||||| ||||||| |||||||||||||| | |||||||| |||||||
Sbjct: 25012063 gaccgcgaagccgtgttcgcgtacgccgacgacccgtgcag-cgccaactacccgctgat 25012005
Query: 189 gcagaa 194
| ||||
Sbjct: 25012004 gaagaa 25011999
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 266 ttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcc 312
||||||||||| ||| |||||||| || || ||||||||||||||||
Sbjct: 25011928 ttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgcc 25011882
>gb|AU094437.1|AU094437 AU094437 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10822, mRNA sequence
Length = 678
Score = 595 bits (300), Expect = e-167
Identities = 493/552 (89%), Gaps = 6/552 (1%)
Strand = Plus / Plus
Query: 23 cggtgaagaactng--tgacgcaggtggccaagaagtccctgagcctgaacgccaggggc 80
|||||||||||| | ||| ||||||||||||||| ||||||||| ||||| || ||||
Sbjct: 94 cggtgaagaacttgcgtgatgcaggtggccaagaaatccctgagcatgaaccacatgggc 153
Query: 81 ggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggc 139
||| |||||| ||| |||||||||||||||||||||| || |||||| |||||||||||
Sbjct: 154 ggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcgatc-gaccgcgaggc 212
Query: 140 ggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantcc 199
||||| | ||||| |||||||| |||||| || |||||| || |||||||||| |||
Sbjct: 213 cgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgttgatgcagaagctcc 271
Query: 200 gcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacg 259
|||||||||| ||||||||||||| ||||| ||||||||||||||||| | |||| ||
Sbjct: 272 gcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgagcgcgtcctggagacc 330
Query: 260 tccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggag 319
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 331 tccatcttcgccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggag 390
Query: 320 gtggaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaag 379
||||| ||||| ||||| ||||| |||||||||| ||| || ||||||||| ||||||||
Sbjct: 391 gtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaag 450
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctc 510
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 511 accggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaac 570
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
|||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||
Sbjct: 571 gagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactg 630
Query: 560 ccgctctgctga 571
|| |||||||||
Sbjct: 631 ccactctgctga 642
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial)
Length = 4843
Score = 593 bits (299), Expect = e-167
Identities = 507/568 (89%), Gaps = 7/568 (1%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 4172 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 4231
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 4232 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 4291
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 4292 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 4349
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgac-gccga 243
|||||||||| |||||||||||||| ||||||||||||| ||||| ||||||| |||||
Sbjct: 4350 tgatgcagaagctccgcgcggtgctgatcgagcacgcgctcgccaa-cggcgaccgccga 4408
Query: 244 gcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgc 303
||||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4409 gcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgc 4468
Query: 304 ggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggt 363
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || ||
Sbjct: 4469 cgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgt 4528
Query: 364 ccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggt 423
||| ||| |||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 4529 ccc-aaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggt 4587
Query: 424 cggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggt 483
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4588 cggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggt 4647
Query: 484 gctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtg 543
|||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 4648 gctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatg 4707
Query: 544 gaacggcgagcccctgccgctctgctga 571
||| |||| ||| ||||| |||||||||
Sbjct: 4708 gaatggcgcgccactgccactctgctga 4735
>gb|CB669898.1|CB669898 OSJNEe02L08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02L08 3', mRNA sequence
Length = 787
Score = 545 bits (275), Expect = e-152
Identities = 438/489 (89%), Gaps = 3/489 (0%)
Strand = Plus / Minus
Query: 83 ctccacaacgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggt 142
||||||| ||| || || |||||||||||||||| || |||||| ||||||||||| ||
Sbjct: 787 ctccacatcgctcggttttgcgagaaggacctgctcaccgcgatc-gaccgcgaggccgt 729
Query: 143 gtttncgtacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcg 202
||| | ||||| |||||||| |||||| || |||||| || |||||||||| ||||||
Sbjct: 728 gttcgcctacgccgacgacccctgcagcgcc-aactacccgttgatgcagaagctccgcg 670
Query: 203 cggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtcc 262
||||||| ||||||||||||| ||||| ||||||||||||||||| | |||| || |||
Sbjct: 669 cggtgctcatcgagcacgcgctcgccaa-cggcgacgccgagcgcgtcctggagacctcc 611
Query: 263 atcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtg 322
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 610 atcttcgccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtg 551
Query: 323 gaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaaggag 382
|| ||||| ||||| ||||| |||||||||| ||| || ||||||||| |||||||||||
Sbjct: 550 gaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggag 491
Query: 383 tgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgacc 442
||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 490 tgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcacc 431
Query: 443 ggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccag 502
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 430 ggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgag 371
Query: 503 cgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccg 562
|||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||||
Sbjct: 370 cgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgcca 311
Query: 563 ctctgctga 571
|||||||||
Sbjct: 310 ctctgctga 302
>gb|CB659237.1|CB659237 OSJNEc16A24.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16A24 3', mRNA sequence
Length = 752
Score = 533 bits (269), Expect = e-149
Identities = 420/467 (89%), Gaps = 3/467 (0%)
Strand = Plus / Minus
Query: 105 agaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgcggacgacccg 164
|||||||||||| || |||||| ||||||||||| ||||| | ||||| ||||||||
Sbjct: 752 agaaggacctgctcaccgcgatc-gaccgcgaggccgtgttcgcctacgccgacgacccc 694
Query: 165 tgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgct 224
|||||| || |||||| || |||||||||| ||||||||||||| |||||||||||||
Sbjct: 693 tgcagcgcc-aactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgct 635
Query: 225 ggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagt 284
||||| ||||||||||||||||| | |||| || |||||||||||||||||||||||||
Sbjct: 634 cgccaa-cggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagt 576
Query: 285 tcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtgg 344
|||||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 575 tcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcg 516
Query: 345 agaacggcagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtacc 404
||||||||| ||| || ||||||||| |||||||||||||||| || |||||||| ||||
Sbjct: 515 agaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctacc 456
Query: 405 ggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccg 464
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 455 ggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccg 396
Query: 465 gcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgc 524
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 395 gcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgc 336
Query: 525 tcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||| ||||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 335 tcgaatgcctcaaggaatggaatggcgcgccactgccactctgctga 289
>gb|CB659678.1|CB659678 OSJNEc16N19.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16N19 3', mRNA sequence
Length = 763
Score = 533 bits (269), Expect = e-149
Identities = 420/467 (89%), Gaps = 3/467 (0%)
Strand = Plus / Minus
Query: 105 agaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgcggacgacccg 164
|||||||||||| || |||||| ||||||||||| ||||| | ||||| ||||||||
Sbjct: 763 agaaggacctgctcaccgcgatc-gaccgcgaggccgtgttcgcctacgccgacgacccc 705
Query: 165 tgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgct 224
|||||| || |||||| || |||||||||| ||||||||||||| |||||||||||||
Sbjct: 704 tgcagcgcc-aactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgct 646
Query: 225 ggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagt 284
||||| ||||||||||||||||| | |||| || |||||||||||||||||||||||||
Sbjct: 645 cgccaa-cggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagt 587
Query: 285 tcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtgg 344
|||||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 586 tcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcg 527
Query: 345 agaacggcagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtacc 404
||||||||| ||| || ||||||||| |||||||||||||||| || |||||||| ||||
Sbjct: 526 agaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctacc 467
Query: 405 ggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccg 464
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 466 ggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccg 407
Query: 465 gcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgc 524
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 406 gcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgc 347
Query: 525 tcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||| ||||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 346 tcgaatgcctcaaggaatggaatggcgcgccactgccactctgctga 300
>gb|CB657381.1|CB657381 OSJNEc12K14.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12K14 3', mRNA sequence
Length = 738
Score = 513 bits (259), Expect = e-143
Identities = 398/443 (89%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 129 gaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgctgat 188
||||||||||| ||||| | ||||| |||||||| |||||| || |||||| || ||||
Sbjct: 731 gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgttgat 673
Query: 189 gcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcg 248
|||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 672 gcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgagcgcg 614
Query: 249 acgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgc 308
| |||| || |||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 613 tcctggagacctccatcttcgccaaggtggccgagttngagcagcacgtccgcgccgcgc 554
Query: 309 tgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtcccca 368
|||||||||||||||| ||||| ||||| | ||| |||||||||| ||| || |||||||
Sbjct: 553 tgcccaaggaggtggaggccgcccgcgccgncgtcgagaacggcaccccgctcgtcccca 494
Query: 369 acaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggca 428
|| |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct: 493 accggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggca 434
Query: 429 ccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcg 488
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 433 ccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcg 374
Query: 489 tggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacg 548
| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |
Sbjct: 373 tcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatg 314
Query: 549 gcgagcccctgccgctctgctga 571
||| ||| ||||| |||||||||
Sbjct: 313 gcgcgccactgccactctgctga 291
>gb|CB669077.1|CB669077 OSJNEe01E22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E22 3', mRNA sequence
Length = 724
Score = 513 bits (259), Expect = e-143
Identities = 383/422 (90%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 150 tacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgct 209
||||| |||||||| |||||| || |||||| || |||||||||| |||||||||||||
Sbjct: 710 tacgccgacgacccctgcagcgcc-aactacccgttgatgcagaagctccgcgcggtgct 652
Query: 210 ggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcg 269
||||||||||||| ||||| ||||||||||||||||| | |||| || ||||||||||
Sbjct: 651 catcgagcacgcgctcgccaa-cggcgacgccgagcgcgtcctggagacctccatcttcg 593
Query: 270 ccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccg 329
||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 592 ccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccg 533
Query: 330 cgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggt 389
| ||||| ||||| |||||||||| ||| || ||||||||| |||||||||||||||| |
Sbjct: 532 cccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgct 473
Query: 390 cctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgaga 449
| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 472 cgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgaga 413
Query: 450 agacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagc 509
||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 412 agacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagc 353
Query: 510 acatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgct 569
||||||||||||||||||| ||||||||||| ||||| |||| ||| ||||| |||||||
Sbjct: 352 acatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgct 293
Query: 570 ga 571
||
Sbjct: 292 ga 291
>gb|AU057635.1|AU057635 AU057635 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21635_1A, mRNA sequence
Length = 714
Score = 509 bits (257), Expect = e-142
Identities = 468/528 (88%), Gaps = 10/528 (1%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 44 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 103
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 104 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 163
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 164 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 221
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| ||| |||||||||
Sbjct: 222 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cgg-gacgccgag 279
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 280 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 339
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 340 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 399
Query: 365 cccaacagga-tcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggt 423
|||||| ||| ||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct: 400 cccaaccggattcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggt 459
Query: 424 cggcaccgagtacctgaccggcgagaagacgaggtcgcccggcga--ggagctgaacaag 481
||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 460 cggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaagggagctgaacaag 519
Query: 482 gtgctcgtggccatcaaccagcgc-aagcacatcgacccgctgctcga 528
|||||||| ||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 520 gtgctcgtcgccatcaacgagcgcaaagcacatcganccgctgctcga 567
>gb|CB652208.1|CB652208 OSJNEc01N16.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc01N16 3', mRNA sequence
Length = 679
Score = 509 bits (257), Expect = e-142
Identities = 378/416 (90%), Gaps = 2/416 (0%)
Strand = Plus / Minus
Query: 156 gacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcga 215
|||||||| |||||| || |||||| || |||||||||| ||||||||||||| ||||
Sbjct: 676 gacgacccctgcagcgcc-aactacccgttgatgcagaagctccgcgcggtgctcatcga 618
Query: 216 gcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaagg 275
||||||||| ||||| ||||||||||||||||| | |||| || ||||||||||||||||
Sbjct: 617 gcacgcgctcgccaa-cggcgacgccgagcgcgtcctggagacctccatcttcgccaagg 559
Query: 276 tggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcg 335
||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 558 tggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcg 499
Query: 336 cggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctacc 395
| ||||| |||||||||| ||| || ||||||||| |||||||||||||||| || ||||
Sbjct: 498 ccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacc 439
Query: 396 cgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacga 455
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 438 cgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgc 379
Query: 456 ggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcg 515
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 378 ggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcg 319
Query: 516 acccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||| ||||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 318 acccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgctga 263
>gb|CB645553.1|CB645553 OSJNEb07E24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07E24 3', mRNA sequence
Length = 760
Score = 507 bits (256), Expect = e-141
Identities = 382/422 (90%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 150 tacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgct 209
||||| |||||||| |||||| || |||||| || |||||||||| |||||||||||||
Sbjct: 760 tacgccgacgacccctgcagcgcc-aactacccgttgatgcagaagctccgcgcggtgct 702
Query: 210 ggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcg 269
||||||||||||| ||||| ||||||||||||||||| | |||| || ||||||||||
Sbjct: 701 catcgagcacgcgctcgccaa-cggcgacgccgagcgcgtcctggagacctccatcttcg 643
Query: 270 ccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccg 329
||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct: 642 ccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccg 583
Query: 330 cgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggt 389
| ||||| | ||| |||||||||| ||| || ||||||||| |||||||||||||||| |
Sbjct: 582 cccgcgccgncgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgct 523
Query: 390 cctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgaga 449
| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 522 cgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgaga 463
Query: 450 agacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagc 509
||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 462 agacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagc 403
Query: 510 acatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgct 569
||||||||||||||||||| ||||||||||| ||||| |||| ||| ||||| |||||||
Sbjct: 402 acatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgct 343
Query: 570 ga 571
||
Sbjct: 342 ga 341
>gb|CB653753.1|CB653753 OSJNEc05B05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05B05 3', mRNA sequence
Length = 710
Score = 507 bits (256), Expect = e-141
Identities = 364/399 (91%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||||| ||||||||||||| ||||| |
Sbjct: 697 ccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-c 639
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||
Sbjct: 638 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcag 579
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggc 352
|| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 578 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggc 519
Query: 353 agccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtg 412
| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 518 accccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtg 459
Query: 413 cgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggag 472
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 458 cgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggag 399
Query: 473 ctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgc 532
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 398 ctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgc 339
Query: 533 ctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 338 ctcaaggaatggaatggcgcgccactgccactctgctga 300
>gb|CB681805.1|CB681805 OSJNEf08H21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08H21 3', mRNA sequence
Length = 749
Score = 507 bits (256), Expect = e-141
Identities = 364/399 (91%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||||| ||||||||||||| ||||| |
Sbjct: 736 ccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-c 678
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||
Sbjct: 677 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcag 618
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggc 352
|| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 617 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggc 558
Query: 353 agccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtg 412
| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 557 accccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtg 498
Query: 413 cgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggag 472
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 497 cgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggag 438
Query: 473 ctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgc 532
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 437 ctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgc 378
Query: 533 ctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 377 ctcaaggaatggaatggcgcgccactgccactctgctga 339
>gb|CB653461.1|CB653461 OSJNEc04I05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04I05 3', mRNA sequence
Length = 701
Score = 502 bits (253), Expect = e-139
Identities = 363/399 (90%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||||| ||||||||||||| ||||| |
Sbjct: 688 ccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-c 630
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||| ||||||
Sbjct: 629 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttngagcag 570
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggc 352
|| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 569 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggc 510
Query: 353 agccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtg 412
| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 509 accccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtg 450
Query: 413 cgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggag 472
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 449 cgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggag 390
Query: 473 ctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgc 532
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 389 ctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgc 330
Query: 533 ctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 329 ctcaaggaatggaatggcgcgccactgccactctgctga 291
>gb|CB676574.1|CB676574 OSJNEe12O09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12O09 3', mRNA sequence
Length = 701
Score = 502 bits (253), Expect = e-139
Identities = 363/399 (90%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||||| ||||||||||||| ||||| |
Sbjct: 688 ccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-c 630
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||
Sbjct: 629 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcag 570
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggc 352
|| |||||||| |||||||||||||||||||| ||||| ||||| | ||| |||||||||
Sbjct: 569 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgncgtcgagaacggc 510
Query: 353 agccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtg 412
| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 509 accccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtg 450
Query: 413 cgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggag 472
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 449 cgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggag 390
Query: 473 ctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgc 532
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 389 ctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgc 330
Query: 533 ctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 329 ctcaaggaatggaatggcgcgccactgccactctgctga 291
>gb|CB669113.1|CB669113 OSJNEe01F22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01F22 3', mRNA sequence
Length = 729
Score = 500 bits (252), Expect = e-139
Identities = 354/387 (91%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 725 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 667
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 666 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 607
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 606 gcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 547
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 546 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 487
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 486 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 427
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 426 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 367
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 366 aatggcgcgccactgccactctgctga 340
>gb|AU077482.1|AU077482 AU077482 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40015_3Z, mRNA sequence
Length = 736
Score = 494 bits (249), Expect = e-137
Identities = 382/423 (90%), Gaps = 3/423 (0%)
Strand = Plus / Plus
Query: 150 tacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaant-ccgcgcggtgc 208
||||| |||||||| |||||| || || ||| || ||||||||||| | |||||||||||
Sbjct: 4 tacgccgacgacccctgcagcgcc-aattacccgttgatgcagaaagttccgcgcggtgc 62
Query: 209 tggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttc 268
| ||||||||||||| ||||| |||||||||||||||| | |||| || |||||||||
Sbjct: 63 tcatcgagcacgcgctcgccaa-cggcgacgccgagcgcntcctggagacctccatcttc 121
Query: 269 gccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagcc 328
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 122 gccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggaggtggaggcc 181
Query: 329 gcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccgg 388
|| ||||| ||||| |||||||||| ||| || ||||||||| ||||||||||||||||
Sbjct: 182 gcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgc 241
Query: 389 tcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgag 448
|| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 tcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgag 301
Query: 449 aagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaag 508
|||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 302 aagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaag 361
Query: 509 cacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgc 568
|||||||||||||||||||| ||||||||||| ||||| |||| ||| ||||| ||||||
Sbjct: 362 cacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctgc 421
Query: 569 tga 571
|||
Sbjct: 422 tga 424
>gb|CB642653.1|CB642653 OSJNEb02P03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb02P03 5', mRNA sequence
Length = 717
Score = 492 bits (248), Expect = e-136
Identities = 362/399 (90%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||||| ||||||||||||| ||||| |
Sbjct: 708 ccaactacccgttgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-c 650
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||
Sbjct: 649 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcag 590
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggc 352
|| |||||||| |||||||||||||||||||| ||||| ||||| | | | |||||||||
Sbjct: 589 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccggcctcgagaacggc 530
Query: 353 agccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtg 412
| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||||
Sbjct: 529 accccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtg 470
Query: 413 cgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggag 472
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 469 cgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggag 410
Query: 473 ctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgc 532
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 409 ctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgc 350
Query: 533 ctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 349 ctcaaggaatggaatggcgcgccactgccactctgctga 311
>gb|CB681435.1|CB681435 OSJNEf07K17.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07K17 3', mRNA sequence
Length = 736
Score = 492 bits (248), Expect = e-136
Identities = 353/387 (91%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 730 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 672
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 671 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 612
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||||||||||||||||| ||||| ||||| ||| | |||||||||| ||| || |||
Sbjct: 611 gcgctgcccaaggaggtggaggccgcccgcgccgccttcgagaacggcaccccgctcgtc 552
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 551 cccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtc 492
Query: 425 ggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtg 484
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 491 ggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtg 432
Query: 485 ctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtgg 544
||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 431 ctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatgg 372
Query: 545 aacggcgagcccctgccgctctgctga 571
|| |||| ||| ||||| |||||||||
Sbjct: 371 aatggcgcgccactgccactctgctga 345
>gb|CB642178.1|CB642178 OSJNEb02D14.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb02D14 3', mRNA sequence
Length = 758
Score = 474 bits (239), Expect = e-131
Identities = 361/400 (90%), Gaps = 2/400 (0%)
Strand = Plus / Minus
Query: 173 ccaactacgcgctgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaac 232
|||||||| || |||||||||| ||||||||||| | ||||||||||||| ||||| |
Sbjct: 746 ccaactacccgttgatgcagaagctccgcgcggtggtcatcgagcacgcgctcgccaa-c 688
Query: 233 ggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcag 292
|||||||||||||||| | |||| || |||||||||||||||||||||||||| ||||||
Sbjct: 687 ggcgacgccgagcgcgtcctggagacctccatcttcgccaaggtggccgagttngagcag 628
Query: 293 caggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgc-ggccgtggagaacgg 351
|| |||||||| |||||||||||||||||||| ||||| ||||| | |||| ||||||||
Sbjct: 627 cacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgnccgtcgagaacgg 568
Query: 352 cagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgt 411
|| ||| || ||||||||| |||||||||||||||| || |||||||| |||||||||||
Sbjct: 567 caccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgt 508
Query: 412 gcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgagga 471
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 507 gcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgagga 448
Query: 472 gctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtg 531
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||
Sbjct: 447 gctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctggaatg 388
Query: 532 cctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 387 cctcaaggaatggaatggcgcgccactgccactctgctga 348
>gb|CB657989.1|CB657989 OSJNEc13L09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13L09 3', mRNA sequence
Length = 625
Score = 456 bits (230), Expect = e-126
Identities = 314/342 (91%)
Strand = Plus / Minus
Query: 230 aacggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgag 289
||||||||||||||||||| | |||| || ||||| ||||||||||||||||||||||||
Sbjct: 622 aacggcgacgccgagcgcgtcctggagacctccatgttcgccaaggtggccgagttcgag 563
Query: 290 cagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaac 349
||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 562 cagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaac 503
Query: 350 ggcagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttc 409
|||| ||| || ||||||||| |||||||||||||||| || |||||||| |||||||||
Sbjct: 502 ggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttc 443
Query: 410 gtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgag 469
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 442 gtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgag 383
Query: 470 gagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgag 529
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 gagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaa 323
Query: 530 tgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 322 tgcctcaaggaatggaatggcgcgccactgccactctgctga 281
>gb|CB653405.1|CB653405 OSJNEc04G09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04G09 3', mRNA sequence
Length = 530
Score = 450 bits (227), Expect = e-124
Identities = 339/375 (90%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 197 tccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggac 256
||||||||||||| || |||||||||| |||| ||||||||||||||||| | ||||
Sbjct: 523 tccgcgcggtgctcatccagcacgcgctcgccac-cggcgacgccgagcgcgtcctggag 465
Query: 257 acgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaag 316
|| |||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||
Sbjct: 464 acctccatcttcgccaaggtggctgagtttgagcagcacgtccgcgccgcgctgcccaag 405
Query: 317 gaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatc 376
|||||||| ||||| ||||| ||||| |||||||||| ||| || ||||||||| |||||
Sbjct: 404 gaggtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatc 345
Query: 377 aaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtac 436
||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtac 285
Query: 437 ctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatc 496
|| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 284 ctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatc 225
Query: 497 aaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagccc 556
||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||
Sbjct: 224 aacgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgcca 165
Query: 557 ctgccgctctgctga 571
||||| || ||||||
Sbjct: 164 ctgccactttgctga 150
>gb|CB649532.1|CB649532 OSJNEb13I06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13I06 3', mRNA sequence
Length = 741
Score = 436 bits (220), Expect = e-120
Identities = 289/312 (92%)
Strand = Plus / Minus
Query: 260 tccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggag 319
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 602 tccatcttcgccaaggtggccgagttcgagcagcacgtccgcgccgcgctgcccaaggag 543
Query: 320 gtggaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaag 379
||||| ||||| ||||| ||||| |||||||||| ||| || ||||||||| ||||||||
Sbjct: 542 gtggaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatcaag 483
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacctc 423
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 422 accggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaac 363
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
|||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||
Sbjct: 362 gagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactg 303
Query: 560 ccgctctgctga 571
|| |||||||||
Sbjct: 302 ccactctgctga 291
>gb|CB651041.1|CB651041 OSJNEb15N12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15N12 3', mRNA sequence
Length = 619
Score = 414 bits (209), Expect = e-113
Identities = 299/329 (90%)
Strand = Plus / Minus
Query: 243 agcgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcg 302
|||||| | |||| || ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 619 agcgcgtcctggagacctccattttcgccaaggtggccgagttcgagcagcacgtccgcg 560
Query: 303 cggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctgg 362
| |||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| | |
Sbjct: 559 ccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacggcaccccgttcg 500
Query: 363 tccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggagg 422
|||||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct: 499 tccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcgtgcgcgaggagg 440
Query: 423 tcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaagg 482
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 tcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaagg 380
Query: 483 tgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagt 542
||||||| ||||||||| ||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 379 tgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctggaatgcctcaaggaat 320
Query: 543 ggaacggcgagcccctgccgctctgctga 571
|||| |||| ||| ||||| |||||||||
Sbjct: 319 ggaatggcgcgccactgccactctgctga 291
>gb|AU093114.1|AU093114 AU093114 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62486, mRNA sequence
Length = 543
Score = 402 bits (203), Expect = e-109
Identities = 333/372 (89%), Gaps = 4/372 (1%)
Strand = Plus / Plus
Query: 202 gcggtgctggtcgagcacg-cgctggccaaacggcgacgccgagcgcgacgtggacacgt 260
|||||||| ||||||||| |||| ||||| ||||||||||||||||| | |||| || |
Sbjct: 12 gcggtgctcatcgagcacggcgctcgccaa-cggcgacgccgagcgcgtcntggagacct 70
Query: 261 ccatcttcgccaaggtggccgagttcgagcagcaggtccgc-gcggcgctgcccaaggag 319
|||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||
Sbjct: 71 ccatcttcgccaaggtggccgagttcgagcagcacgtccgctgccgcgttgcccaaggag 130
Query: 320 gtggaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatcaag 379
||||| |||| || || ||||| |||||||||| ||| | ||||||||| || |||||
Sbjct: 131 gtggagtccgcccgtgccgccgtcgagaacggcaccccgntcgtccccaaccgg-tcaag 189
Query: 380 gagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctg 439
|||||||| || |||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 190 gagtgccgctcgtacccgctctaccggttcgtgcgcgagnaggtcggcaccgagtacctc 249
Query: 440 accggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaac 499
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 250 accggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaac 309
Query: 500 cagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccctg 559
|||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||
Sbjct: 310 gagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccactg 369
Query: 560 ccgctctgctga 571
|| |||||||||
Sbjct: 370 ccactctgctga 381
>gb|CB669311.1|CB669311 OSJNEe01L07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01L07 3', mRNA sequence
Length = 723
Score = 387 bits (195), Expect = e-105
Identities = 316/355 (89%), Gaps = 1/355 (0%)
Strand = Plus / Minus
Query: 217 cacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaaggt 276
|||||||| ||||| ||| ||||||||||||| | |||| || ||||| |||||||||||
Sbjct: 723 cacgcgctcgccaa-cggggacgccgagcgcgtcctggagacctccattttcgccaaggt 665
Query: 277 ggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgc 336
||||||||| |||||||| |||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 664 ggccgagtttgagcagcacgtccgcgccgcgctgcccaaggaggtggaggccgcccgcgc 605
Query: 337 ggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctaccc 396
|||||||||||||||| ||| || ||||||||| |||||||||||||||| || |||||
Sbjct: 604 cgccgtggagaacggcaccccgcttgtccccaaccggatcaaggagtgccgctcgtaccc 545
Query: 397 gctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgag 456
||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |
Sbjct: 544 gctttaccggttcgtgcgcgaggaggtcggccccgagtccctccccggcgagaagacgcg 485
Query: 457 gtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcga 516
||| |||||||||||||||||||||||| | || ||||||||| ||||||||||||||||
Sbjct: 484 gtcccccggcgaggagctgaacaaggtgtttgtcgccatcaacgagcgcaagcacatcga 425
Query: 517 cccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||| |||| ||||||||||| ||||| || | ||||||||| || ||||||
Sbjct: 424 cccgctgttcgaatgcctcaaggaatggaatggggcgcccctgccactttgctga 370
>gb|C73769.1|C73769 C73769 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20542_3A, mRNA sequence
Length = 404
Score = 379 bits (191), Expect = e-102
Identities = 285/314 (90%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 260 tccatcttcgccaaggtggccga-gttcga-gcagcaggtccgcgcggcgctgcccaagg 317
||||||||||||||| ||||||| |||||| | |||| |||||||| ||||||||||||
Sbjct: 363 tccatcttcgccaagttggccgaagttcgaagaagcacgtccgcgccgcgctgcccaagn 304
Query: 318 aggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtccccaacaggatca 377
||||| | ||||| ||||| ||||| |||||||||| ||| || ||||||||| ||||||
Sbjct: 303 aggtgaaggccgcccgcgccgccgtcgagaacggcaccccgctcgtccccaaccggatca 244
Query: 378 aggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacc 437
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 aggagtgccgctcgtacccgctctaccggttcgtgcgcgaggaggtcggcaccgagtacc 184
Query: 438 tgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctcgtggccatca 497
| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 183 tcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatca 124
Query: 498 accagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaacggcgagcccc 557
|| |||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |
Sbjct: 123 acgagcgcaagcacatcgacccgctgctcgaatgcctcaaggaatggaatggcgcgccac 64
Query: 558 tgccgctctgctga 571
|||| |||||||||
Sbjct: 63 tgccactctgctga 50
>gb|CD670650.1|CD670650 OsMR065 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 706
Score = 369 bits (186), Expect = 2e-099
Identities = 389/447 (87%), Gaps = 8/447 (1%)
Strand = Plus / Plus
Query: 7 gagaacgtgaaggccgcggtgaagaactn-gtgacgcaggtggccaagaagtccctgagc 65
|||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 266 gagaacatgaagaccgcggtgaagaactgcgtgatgcaggtggccaagaaatccctgagc 325
Query: 66 ctgaacgccaggggcggc-tccacaacgcgcgcttctgcgagaaggacctgcagacggcg 124
||||| || ||||||| |||||| ||| |||||||||||||||||||||| || |||
Sbjct: 326 atgaaccacatgggcggcctccacatcgctcgcttctgcgagaaggacctgctcaccgcg 385
Query: 125 atcngaccgcgaggcggtgtttncgtacgcggacgacccgtgcagcccccaactacgcgc 184
||| ||||||||||| ||||| | ||||| |||||||| |||||| || |||||| ||
Sbjct: 386 atc-gaccgcgaggccgtgttcgcctacgccgacgacccctgcagcgcc-aactacccgt 443
Query: 185 tgatgcagaaantccgcgcggtgctggtcgagcacgcgctggccaaacggcgacgccgag 244
|||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||
Sbjct: 444 tgatgcagaagctccgcgcggtgctcatcgagcacgcgctcgccaa-cggcgacgccgag 502
Query: 245 cgcgacgtggacacgtccatcttcgccaaggtggccgagttcgagcagcaggtccgcgcg 304
|||| | |||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 503 cgcgtcctggagacctccatcttcgccaaggtggccgagttcgagcagcacgtccgcgcc 562
Query: 305 gcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacggcagccctctggtc 364
|||||| |||| | || || ||||| ||||| ||||| |||||||||| ||| || |||
Sbjct: 563 gcgctggccaaaggagt-gaggccgcccgcgccgccgtcgagaacggcaccccgctcgtc 621
Query: 365 cccaacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtc 424
|||||| |||||||||||||||| || |||||||| || |||||||||||||| ||||||
Sbjct: 622 cccaaccggatcaaggagtgccgctcgtacccgctcta-cggttcgtgcgcga-gaggtc 679
Query: 425 ggcaccgagtacctgaccggcgagaag 451
|||||||||||||| ||||||||||||
Sbjct: 680 ggcaccgagtacctcaccggcgagaag 706
>gb|CB644633.1|CB644633 OSJNEb05O24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05O24 3', mRNA sequence
Length = 635
Score = 367 bits (185), Expect = 7e-099
Identities = 260/285 (91%)
Strand = Plus / Minus
Query: 287 gagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggag 346
|||||||| |||||||| ||| |||||||||||||||| |||| ||||| ||||| |||
Sbjct: 632 gagcagcatgtccgcgccgcgttgcccaaggaggtggagaccgcccgcgccgccgtcgag 573
Query: 347 aacggcagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccgg 406
||||||| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||
Sbjct: 572 aacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccgg 513
Query: 407 ttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggc 466
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 512 ttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggc 453
Query: 467 gaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctc 526
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 452 gaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctc 393
Query: 527 gagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
|| ||||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 392 gaatgcctcaaggaatggaatggcgcgccactgccactctgctga 348
>gb|CB648738.1|CB648738 OSJNEb12E11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12E11 3', mRNA sequence
Length = 572
Score = 367 bits (185), Expect = 7e-099
Identities = 257/281 (91%)
Strand = Plus / Minus
Query: 291 agcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggccgtggagaacg 350
|||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 572 agcacgtccgagccgcgctgcccaaggaggtggaggccgcccgcgccgccgtcgagaacg 513
Query: 351 gcagccctctggtccccaacaggatcaaggagtgccggtcctacccgctgtaccggttcg 410
||| ||| || ||||||||| |||||||||||||||| || |||||||| ||||||||||
Sbjct: 512 gcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgctctaccggttcg 453
Query: 411 tgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtcgcccggcgagg 470
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 452 tgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtcgcccggcgagg 393
Query: 471 agctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgacccgctgctcgagt 530
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
Sbjct: 392 agctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgacccgctgctcgaat 333
Query: 531 gcctcaaggagtggaacggcgagcccctgccgctctgctga 571
|||||||||| ||||| |||| ||| ||||| |||||||||
Sbjct: 332 gcctcaaggaatggaatggcgcgccactgccactctgctga 292
>gb|CB685188.1|CB685188 OSJNEf15G11.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15G11 3', mRNA sequence
Length = 577
Score = 365 bits (184), Expect = 3e-098
Identities = 262/288 (90%)
Strand = Plus / Minus
Query: 280 cgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgcgcggc 339
||||||||||||||| |||||||| ||| ||||||||||||| || ||||| ||||| ||
Sbjct: 577 cgagttcgagcagcacgtccgcgccgcgttgcccaaggaggttgaggccgcccgcgccgc 518
Query: 340 cgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctacccgct 399
||| |||||||||| ||| || ||||||||| |||||||||||||||| || ||||||||
Sbjct: 517 cgtcgagaacggcaccccgctcgtccccaaccggatcaaggagtgccgctcgtacccgct 458
Query: 400 gtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacgaggtc 459
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 457 ctaccggttcgtgcgcgaggaggtcggcaccgagtacctcaccggcgagaagacgcggtc 398
Query: 460 gcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatcgaccc 519
|||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 397 gcccggtgaggagctgaacaaggtgctcgtcgccatcaacgagcgcaagcacatcgaccc 338
Query: 520 gctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctg 567
||||||||| ||||||||||| ||||| |||| ||| ||||| |||||
Sbjct: 337 gctgctcgaatgcctcaaggaatggaatggcgcgccactgccactctg 290
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
complete sequence
Length = 177374
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 65675 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 65617
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 65616 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 65558
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 65557 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 65499
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 65498 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 65439
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 65438 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 65379
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 65378 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 65319
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 65318 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 65259
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 65258 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 65202
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19,
complete sequence
Length = 176917
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 123094 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 123036
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 123035 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 122977
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 122976 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 122918
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 122917 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 122858
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 122857 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 122798
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 122797 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 122738
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 122737 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 122678
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 122677 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 122621
>gb|AACV01012226.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012226, whole
genome shotgun sequence
Length = 7782
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Plus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 4982 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 5040
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 5041 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 5099
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 5100 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 5158
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 5159 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 5218
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 5219 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 5278
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 5279 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 5338
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 5339 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 5398
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 5399 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 5455
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2151
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Plus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 1678 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 1736
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 1737 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 1795
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 1796 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 1854
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 1855 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 1914
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 1915 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 1974
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 1975 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 2034
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 2035 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 2094
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 2095 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 2151
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 2115238 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 2115180
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 2115179 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 2115121
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 2115120 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 2115062
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 2115061 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 2115002
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 2115001 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 2114942
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 2114941 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 2114882
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 2114881 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 2114822
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 2114821 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 2114765
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 3169466 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 3169408
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 3169407 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 3169349
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 3169348 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 3169290
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 3169289 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 3169230
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 3169229 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 3169170
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 3169169 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 3169110
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 3169109 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 3169050
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 3169049 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 3168993
Score = 230 bits (116), Expect = 1e-057
Identities = 182/204 (89%)
Strand = Plus / Plus
Query: 368 aacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggc 427
|||||||||| |||||| |||| |||||||| ||||||||||| ||||||||| ||||
Sbjct: 6604408 aacaggatcaccgagtgcaggtcgtacccgctctaccggttcgtccgcgaggagctcggg 6604467
Query: 428 accgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctc 487
|| |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 6604468 acagagtacttgaccggggagaagacgcggtcgcccggcgaggaggtgaacaaggtgttc 6604527
Query: 488 gtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaac 547
|| ||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 6604528 gtcgccatgaaccagggcaagcacatcgacgcactgctcgagtgcctcaaggagtggaac 6604587
Query: 548 ggcgagcccctgccgctctgctga 571
|||||||| ||||| ||||||||
Sbjct: 6604588 ggcgagcctctgcccatctgctga 6604611
Score = 168 bits (85), Expect = 3e-039
Identities = 227/271 (83%), Gaps = 3/271 (1%)
Strand = Plus / Plus
Query: 83 ctccacaacgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggt 142
|||||||| || || ||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct: 6604126 ctccacaaggcccggttctgcgagaaggacctgctccaggcgatc-gaccgcgaggccgt 6604184
Query: 143 gtttncgtacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcg 202
||| |||||||||||||||| |||||| || |||||| ||||||||||||| | ||||
Sbjct: 6604185 gttcgcgtacgcggacgacccctgcagcgcc-aactacccgctgatgcagaagatgcgcg 6604243
Query: 203 cggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtcc 262
| || || ||||||||||||||||||| |||||| || |||||| |||| ||||| ||
Sbjct: 6604244 ccgtcctcatcgagcacgcgctggccaa-cggcgaggcggagcgcaacgtcgacacctcg 6604302
Query: 263 atcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtg 322
| ||||||||||| || ||||||| || || |||||| ||||||||||| |||||||
Sbjct: 6604303 gtgttcgccaaggtcgcgacgttcgaggaggagctccgcgtggcgctgcccagggaggtg 6604362
Query: 323 gaagccgcgcgcgcggccgtggagaacggca 353
|| || || || |||||||||||||||||||
Sbjct: 6604363 gaggctgcccgtgcggccgtggagaacggca 6604393
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 20469779 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 20469721
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 20469720 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 20469662
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 20469661 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 20469603
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 20469602 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 20469543
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 20469542 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 20469483
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 20469482 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 20469423
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 20469422 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 20469363
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 20469362 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 20469306
Score = 230 bits (116), Expect = 1e-057
Identities = 182/204 (89%)
Strand = Plus / Plus
Query: 368 aacaggatcaaggagtgccggtcctacccgctgtaccggttcgtgcgcgaggaggtcggc 427
|||||||||| |||||| |||| |||||||| ||||||||||| ||||||||| ||||
Sbjct: 23904721 aacaggatcaccgagtgcaggtcgtacccgctctaccggttcgtccgcgaggagctcggg 23904780
Query: 428 accgagtacctgaccggcgagaagacgaggtcgcccggcgaggagctgaacaaggtgctc 487
|| |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 23904781 acagagtacttgaccggggagaagacgcggtcgcccggcgaggaggtgaacaaggtgttc 23904840
Query: 488 gtggccatcaaccagcgcaagcacatcgacccgctgctcgagtgcctcaaggagtggaac 547
|| ||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 23904841 gtcgccatgaaccagggcaagcacatcgacgcactgctcgagtgcctcaaggagtggaac 23904900
Query: 548 ggcgagcccctgccgctctgctga 571
|||||||| ||||| ||||||||
Sbjct: 23904901 ggcgagcctctgcccatctgctga 23904924
Score = 168 bits (85), Expect = 3e-039
Identities = 227/271 (83%), Gaps = 3/271 (1%)
Strand = Plus / Plus
Query: 83 ctccacaacgcgcgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggt 142
|||||||| || || ||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct: 23904439 ctccacaaggcccggttctgcgagaaggacctgctccaggcgatc-gaccgcgaggccgt 23904497
Query: 143 gtttncgtacgcggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcg 202
||| |||||||||||||||| |||||| || |||||| ||||||||||||| | ||||
Sbjct: 23904498 gttcgcgtacgcggacgacccctgcagcgcc-aactacccgctgatgcagaagatgcgcg 23904556
Query: 203 cggtgctggtcgagcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtcc 262
| || || ||||||||||||||||||| |||||| || |||||| |||| ||||| ||
Sbjct: 23904557 ccgtcctcatcgagcacgcgctggccaa-cggcgaggcggagcgcaacgtcgacacctcg 23904615
Query: 263 atcttcgccaaggtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtg 322
| ||||||||||| || ||||||| || || |||||| ||||||||||| |||||||
Sbjct: 23904616 gtgttcgccaaggtcgcgacgttcgaggaggagctccgcgtggcgctgcccagggaggtg 23904675
Query: 323 gaagccgcgcgcgcggccgtggagaacggca 353
|| || || || |||||||||||||||||||
Sbjct: 23904676 gaggctgcccgtgcggccgtggagaacggca 23904706
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 331 bits (167), Expect = 4e-088
Identities = 402/477 (84%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 95 cgcttctgcgagaaggacctgcagacggcgatcngaccgcgaggcggtgtttncgtacgc 154
|||||||||||||||||||||| | | |||| ||||| ||||| ||||| |||||||
Sbjct: 20809870 cgcttctgcgagaaggacctgctcagcgagatc-gaccgggaggccgtgttcgcgtacgc 20809812
Query: 155 ggacgacccgtgcagcccccaactacgcgctgatgcagaaantccgcgcggtgctggtcg 214
||||||||||||||| || |||||| |||||||| |||| ||||| ||||| ||||
Sbjct: 20809811 cgacgacccgtgcagcgcc-aactacccgctgatgaagaagctccgcagcgtgctcgtcg 20809753
Query: 215 agcacgcgctggccaaacggcgacgccgagcgcgacgtggacacgtccatcttcgccaag 274
||| |||||| ||||| ||||| ||||||| ||||| ||| || ||| | ||||||||
Sbjct: 20809752 agcgcgcgctcgccaa-cggcgccgccgagttcgacgcggagacctccgtgctcgccaag 20809694
Query: 275 gtggccgagttcgagcagcaggtccgcgcggcgctgcccaaggaggtggaagccgcgcgc 334
|| || ||||||| || || ||||||||||||||||| || || || |||||||||
Sbjct: 20809693 gtcgcgcggttcgaggaggagctccgcgcggcgctgccccgggccgtcgaggccgcgcgc 20809634
Query: 335 gcggccgtggagaacggcagccctctggtccccaacaggatcaaggagtgccggtcctac 394
|| |||||||||| ||||| | || |||||||||||| |||||||| || |||
Sbjct: 20809633 gccgccgtggagagcggcacggcggcggcgcccaacaggatcgccgagtgccgctcgtac 20809574
Query: 395 ccgctgtaccggttcgtgcgcgaggaggtcggcaccgagtacctgaccggcgagaagacg 454
||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 20809573 ccgctctaccggttcgtgcgcgaggagctcggcaccgcctacctcaccggcgagaagacg 20809514
Query: 455 aggtcgcccggcgaggagctgaacaaggtgctcgtggccatcaaccagcgcaagcacatc 514
||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||
Sbjct: 20809513 cggtcgcccggcgaggagctcaacaaggtgctcgtcgcgatcaaccagggcaagcacatc 20809454
Query: 515 gacccgctgctcgagtgcctcaaggagtggaacggcgagcccctgccgctctgctga 571
||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 20809453 gacccgctgctcgagtgcctcaaggagtggaacggcgcgccactgccaatctgctga 20809397
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,136,786
Number of Sequences: 438736
Number of extensions: 1136786
Number of successful extensions: 9367
Number of sequences better than 0.5: 371
Number of HSP's better than 0.5 without gapping: 373
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7865
Number of HSP's gapped (non-prelim): 1117
length of query: 844
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 823
effective length of database: 2,791,206,460
effective search space: 2297162916580
effective search space used: 2297162916580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)