BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665451.2.1
(911 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069037.1| Oryza sativa (japonica cultivar-group) cDNA... 149 3e-033
dbj|AK121363.1| Oryza sativa (japonica cultivar-group) cDNA... 149 3e-033
gb|AACV01003051.1| Oryza sativa (japonica cultivar-group) c... 149 3e-033
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
ref|XM_463733.1| Oryza sativa (japonica cultivar-group), p... 149 3e-033
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 149 3e-033
dbj|AP003735.4| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
dbj|AK064627.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-024
gb|AACV01003052.1| Oryza sativa (japonica cultivar-group) c... 119 3e-024
ref|XM_463737.1| Oryza sativa (japonica cultivar-group), p... 119 3e-024
gb|CB680229.1|CB680229 OSJNEf04K17.f OSJNEf Oryza sativa (j... 107 1e-020
dbj|AK107822.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
dbj|AK109284.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
ref|XM_463739.1| Oryza sativa (japonica cultivar-group), p... 107 1e-020
gb|AQ688928.1|AQ688928 nbxb0078J07r CUGI Rice BAC Library O... 84 2e-013
gb|CV723538.1|CV723538 root--03-O05.g1 Rice root lambda pha... 84 2e-013
gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04... 84 2e-013
gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07... 84 2e-013
gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone... 84 2e-013
gb|AACV01021984.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
ref|NM_197497.1| Oryza sativa (japonica cultivar-group) put... 84 2e-013
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 84 2e-013
ref|XM_463734.1| Oryza sativa (japonica cultivar-group), p... 84 2e-013
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
gb|CA754695.1|CA754695 BR030004000_PLATE_G02_15_018.ab1 OA ... 78 9e-012
gb|CV724487.1|CV724487 14Salt--01-B12.b1 Salt treated rice ... 78 9e-012
dbj|AK064612.1| Oryza sativa (japonica cultivar-group) cDNA... 78 9e-012
ref|XM_463735.1| Oryza sativa (japonica cultivar-group), p... 78 9e-012
gb|AU069491.1|AU069491 AU069491 Rice callus Oryza sativa (j... 74 1e-010
gb|CF290923.1|CF290923 14ROOT--01-C10.g1 Rice root plasmid ... 74 1e-010
gb|CF291533.1|CF291533 14ROOT--01-P22.g1 Rice root plasmid ... 74 1e-010
gb|CF291953.1|CF291953 14ROOT--02-J13.b1 Rice root plasmid ... 74 1e-010
gb|CF292764.1|CF292764 30DGS--01-L09.b1 Rice leaf plasmid c... 74 1e-010
gb|CF331397.1|CF331397 NACL--07-I05.b1 Rice callus plasmid ... 74 1e-010
dbj|AK103316.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
gb|AF309377.1| Oryza sativa (japonica cultivar-group) clone... 74 1e-010
dbj|AP005525.2| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
dbj|AP005422.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AACV01019786.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|XM_450661.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|XM_506655.1| PREDICTED Oryza sativa (japonica cultivar-... 74 1e-010
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AU063397.2|AU063397 AU063397 Rice callus Oryza sativa (j... 68 9e-009
gb|CF291581.1|CF291581 14ROOT--02-B03.b1 Rice root plasmid ... 68 9e-009
gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11... 68 9e-009
gb|AACV01021814.1| Oryza sativa (japonica cultivar-group) c... 68 9e-009
ref|NM_197036.1| Oryza sativa (japonica cultivar-group) put... 68 9e-009
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 68 9e-009
gb|D46989.1|D46989 RICS12005A Rice green shoot Oryza sativa... 66 4e-008
gb|CF312419.1|CF312419 ABF--08-C21.b1 ABF3-overexpressing t... 66 4e-008
dbj|AK120037.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
gb|AACV01021979.1| Oryza sativa (japonica cultivar-group) c... 66 4e-008
ref|NM_197474.1| Oryza sativa (japonica cultivar-group) put... 66 4e-008
ref|NM_197495.1| Oryza sativa (japonica cultivar-group) put... 66 4e-008
gb|C26393.1|C26393 C26393 Rice callus cDNA Oryza sativa (ja... 64 1e-007
gb|C29092.2|C29092 C29092 Rice callus cDNA Oryza sativa (ja... 64 1e-007
gb|C72112.1|C72112 C72112 Rice panicle at flowering stage O... 62 6e-007
gb|C93550.1|C93550 C93550 Rice callus Oryza sativa (japonic... 62 6e-007
gb|D16079.1|D16079 RICC2914A Rice callus Oryza sativa (japo... 62 6e-007
gb|D22910.1|D22910 RICC1756A Rice callus Oryza sativa (japo... 62 6e-007
gb|AU063273.1|AU063273 AU063273 Rice callus Oryza sativa (j... 62 6e-007
gb|AU063277.1|AU063277 AU063277 Rice callus Oryza sativa (j... 62 6e-007
gb|AU063304.1|AU063304 AU063304 Rice callus Oryza sativa (j... 62 6e-007
gb|CA756299.1|CA756299 BR030039000_PLATE_G02_15_018.ab1 OA ... 62 6e-007
gb|CV724048.1|CV724048 root--05-K06.g1 Rice root lambda pha... 62 6e-007
gb|AU062768.2|AU062768 AU062768 Rice callus Oryza sativa (j... 62 6e-007
gb|AU063515.2|AU063515 AU063515 Rice callus Oryza sativa (j... 62 6e-007
dbj|AK061436.1| Oryza sativa (japonica cultivar-group) cDNA... 62 6e-007
dbj|AK099137.1| Oryza sativa (japonica cultivar-group) cDNA... 62 6e-007
dbj|AK103358.1| Oryza sativa (japonica cultivar-group) cDNA... 62 6e-007
dbj|AK105407.1| Oryza sativa (japonica cultivar-group) cDNA... 62 6e-007
gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 ... 62 6e-007
gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb00... 62 6e-007
gb|AF402798.1| Oryza sativa (japonica cultivar-group) clone... 62 6e-007
dbj|AP005840.4| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|AACV01007244.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
gb|AACV01008044.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
gb|AACV01015249.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
ref|NM_184820.1| Oryza sativa (japonica cultivar-group), mRNA 62 6e-007
ref|XM_463736.1| Oryza sativa (japonica cultivar-group), p... 62 6e-007
ref|XM_476737.1| Oryza sativa (japonica cultivar-group), mRNA 62 6e-007
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 62 6e-007
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 62 6e-007
ref|XM_506181.1| PREDICTED Oryza sativa (japonica cultivar-... 62 6e-007
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 62 6e-007
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|C96616.1|C96616 C96616 Rice callus Oryza sativa (japonic... 60 2e-006
gb|CV723148.1|CV723148 root--02-K07.g1 Rice root lambda pha... 60 2e-006
gb|CV723649.1|CV723649 root--04-E24.g1 Rice root lambda pha... 60 2e-006
gb|D46686.1|D46686 RICS11517A Rice green shoot Oryza sativa... 58 9e-006
gb|D47038.1|D47038 RICS12108A Rice green shoot Oryza sativa... 58 9e-006
gb|D47088.1|D47088 RICS12209A Rice green shoot Oryza sativa... 58 9e-006
gb|D47119.1|D47119 RICS12258A Rice green shoot Oryza sativa... 58 9e-006
gb|D47564.1|D47564 RICS13143A Rice green shoot Oryza sativa... 58 9e-006
gb|D47978.1|D47978 RICS13810A Rice green shoot Oryza sativa... 58 9e-006
gb|D48239.1|D48239 RICS14359A Rice green shoot Oryza sativa... 58 9e-006
gb|AU063589.1|AU063589 AU063589 Rice callus Oryza sativa (j... 58 9e-006
gb|AU089737.1|AU089737 AU089737 Rice green shoot Oryza sati... 58 9e-006
gb|BF889435.1|BF889435 EST004 Magnaporthe grisea infected 1... 58 9e-006
gb|CA754459.1|CA754459 BR040017000_PLATE_E08_61_066.ab1 OA ... 58 9e-006
gb|CF309507.1|CF309507 ABF--03-L14.g1 ABF3-overexpressing t... 58 9e-006
gb|CF332560.1|CF332560 JMT--01-B21.g1 AtJMT-overexpressing ... 58 9e-006
gb|CF333605.1|CF333605 JMT--02-J04.b1 AtJMT-overexpressing ... 58 9e-006
dbj|AK059726.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK059882.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK060931.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK064650.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK067361.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK104213.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK105926.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
dbj|AK106212.1| Oryza sativa (japonica cultivar-group) cDNA... 58 9e-006
gb|AF402794.1| Oryza sativa (japonica cultivar-group) clone... 58 9e-006
gb|AF402801.1| Oryza sativa (japonica cultivar-group) clone... 58 9e-006
gb|AF402805.1| Oryza sativa (japonica cultivar-group) clone... 58 9e-006
gb|AACV01002143.1| Oryza sativa (japonica cultivar-group) c... 58 9e-006
gb|AACV01021982.1| Oryza sativa (japonica cultivar-group) c... 58 9e-006
gb|AACV01021983.1| Oryza sativa (japonica cultivar-group) c... 58 9e-006
ref|NM_192150.1| Oryza sativa (japonica cultivar-group), p... 58 9e-006
ref|NM_197480.1| Oryza sativa (japonica cultivar-group) put... 58 9e-006
ref|NM_197484.1| Oryza sativa (japonica cultivar-group) put... 58 9e-006
ref|NM_197492.1| Oryza sativa (japonica cultivar-group) put... 58 9e-006
ref|NM_197496.1| Oryza sativa (japonica cultivar-group) put... 58 9e-006
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 58 9e-006
dbj|AP003450.3| Oryza sativa (japonica cultivar-group) geno... 58 9e-006
gb|CA755017.1|CA755017 BR030011000_PLATE_A08_57_056.ab1 OA ... 56 3e-005
gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone... 56 3e-005
gb|AC130607.2| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AACV01012164.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01021985.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NM_197499.1| Oryza sativa (japonica cultivar-group) put... 56 3e-005
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|CV723771.1|CV723771 root--04-L12.g1 Rice root lambda pha... 54 1e-004
gb|AZ046565.1|AZ046565 nbeb0088F12f CUGI Rice BAC Library (... 52 5e-004
gb|AZ128194.1|AZ128194 OSJNBb0089F07r CUGI Rice BAC Library... 52 5e-004
gb|AZ133114.1|AZ133114 OSJNBb0108B19r CUGI Rice BAC Library... 52 5e-004
gb|D39884.1|D39884 RICS1530A Rice shoot Oryza sativa (japon... 52 5e-004
gb|D47665.1|D47665 RICS13293A Rice green shoot Oryza sativa... 52 5e-004
gb|C29001.1|C29001 C29001 Rice callus cDNA Oryza sativa (ja... 52 5e-004
gb|D24252.1|D24252 RICR1583A Rice root Oryza sativa (japoni... 52 5e-004
gb|AU062883.1|AU062883 AU062883 Rice callus Oryza sativa (j... 52 5e-004
gb|CB665723.1|CB665723 OSJNEd12E20.f OSJNEd Oryza sativa (j... 52 5e-004
gb|CV723643.1|CV723643 root--04-E17.g1 Rice root lambda pha... 52 5e-004
gb|CV724488.1|CV724488 14Salt--01-B12.g1 Salt treated rice ... 52 5e-004
dbj|AK069604.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AK098972.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AK105890.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AK109314.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AP005180.4| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AACV01016125.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NM_197498.1| Oryza sativa (japonica cultivar-group) put... 52 5e-004
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|AQ160965.1|AQ160965 nbxb0006C06f CUGI Rice BAC Library O... 50 0.002
gb|AQ854618.1|AQ854618 nbxb0080J04r CUGI Rice BAC Library O... 50 0.002
gb|AQ953971.1|AQ953971 nbeb0053B16f CUGI Rice BAC Library (... 50 0.002
gb|D40283.1|D40283 RICS2148A Rice shoot Oryza sativa (japon... 50 0.002
gb|D41737.1|D41737 RICS4519A Rice shoot Oryza sativa (japon... 50 0.002
gb|D46608.1|D46608 RICS11381A Rice green shoot Oryza sativa... 50 0.002
gb|D48238.1|D48238 RICS14358A Rice green shoot Oryza sativa... 50 0.002
gb|C24798.1|C24798 C24798 Rice green shoot Oryza sativa (ja... 50 0.002
gb|C26141.1|C26141 C26141 Rice callus cDNA Oryza sativa (ja... 50 0.002
gb|C26329.1|C26329 C26329 Rice callus cDNA Oryza sativa (ja... 50 0.002
gb|C26655.1|C26655 C26655 Rice callus cDNA Oryza sativa (ja... 50 0.002
gb|C28168.1|C28168 C28168 Rice callus cDNA Oryza sativa (ja... 50 0.002
gb|C91886.1|C91886 C91886 Rice cDNA from immature leaf incl... 50 0.002
gb|D22158.1|D22158 RICC10428A Rice callus Oryza sativa (jap... 50 0.002
gb|D22406.1|D22406 RICC10976A Rice callus Oryza sativa (jap... 50 0.002
gb|AU057225.1|AU057225 AU057225 Oryza sativa mature leaf Ni... 50 0.002
gb|AU063088.1|AU063088 AU063088 Rice callus Oryza sativa (j... 50 0.002
gb|AU064440.1|AU064440 AU064440 Rice panicle shorter than 3... 50 0.002
gb|AU064702.1|AU064702 AU064702 Rice panicle (between 3cm t... 50 0.002
gb|AU064832.1|AU064832 AU064832 Rice panicle (between 3cm t... 50 0.002
gb|AU077658.1|AU077658 AU077658 Rice panicle (between 3cm t... 50 0.002
gb|AU077876.1|AU077876 AU077876 Rice shoot Oryza sativa (ja... 50 0.002
gb|AU063089.2|AU063089 AU063089 Rice callus Oryza sativa (j... 50 0.002
gb|AU062673.2|AU062673 AU062673 Rice callus Oryza sativa (j... 50 0.002
gb|AU162577.1|AU162577 AU162577 Rice cDNA from young root O... 50 0.002
gb|AU197890.1|AU197890 AU197890 Rice green shoot Oryza sati... 50 0.002
gb|CB674416.1|CB674416 OSJNEe09H07.f OSJNEe Oryza sativa (j... 50 0.002
gb|CB683623.1|CB683623 OSJNEf12D20.f OSJNEf Oryza sativa (j... 50 0.002
gb|CF196341.1|CF196341 Azvi2.1_G03 AZ-VI Oryza sativa (japo... 50 0.002
gb|CF290862.1|CF290862 14ROOT--01-B01.b1 Rice root plasmid ... 50 0.002
gb|CF291218.1|CF291218 14ROOT--01-I24.b1 Rice root plasmid ... 50 0.002
gb|CF291278.1|CF291278 14ROOT--01-K07.b1 Rice root plasmid ... 50 0.002
gb|CF291512.1|CF291512 14ROOT--01-P12.b1 Rice root plasmid ... 50 0.002
gb|CF291519.1|CF291519 14ROOT--01-P15.g1 Rice root plasmid ... 50 0.002
gb|CF291733.1|CF291733 14ROOT--02-E13.g1 Rice root plasmid ... 50 0.002
gb|CF291931.1|CF291931 14ROOT--02-J01.b1 Rice root plasmid ... 50 0.002
gb|CF292637.1|CF292637 30DGS--01-I15.b1 Rice leaf plasmid c... 50 0.002
gb|CF293638.1|CF293638 30DGS--02-O08.g1 Rice leaf plasmid c... 50 0.002
gb|CF294146.1|CF294146 30DGS--03-J05.b1 Rice leaf plasmid c... 50 0.002
gb|CF294299.1|CF294299 30DGS--03-M12.b1 Rice leaf plasmid c... 50 0.002
gb|CF294321.1|CF294321 30DGS--03-M23.b1 Rice leaf plasmid c... 50 0.002
gb|CF294747.1|CF294747 30DGS--04-G09.b1 Rice leaf plasmid c... 50 0.002
gb|CF295323.1|CF295323 30DGS--05-D13.b1 Rice leaf plasmid c... 50 0.002
gb|CF295602.1|CF295602 30DGS--05-J23.g1 Rice leaf plasmid c... 50 0.002
gb|CF295748.1|CF295748 30DGS--05-N05.b1 Rice leaf plasmid c... 50 0.002
gb|CF295873.1|CF295873 30DGS--06-A01.g1 Rice leaf plasmid c... 50 0.002
gb|CF296288.1|CF296288 30DGS--06-J11.b1 Rice leaf plasmid c... 50 0.002
gb|CF296401.1|CF296401 30DGS--06-L24.b1 Rice leaf plasmid c... 50 0.002
gb|CF296769.1|CF296769 30DGS--07-E19.b1 Rice leaf plasmid c... 50 0.002
gb|CF305190.1|CF305190 CLD1--01-A12.b1 Rice cold treated le... 50 0.002
gb|CF312811.1|CF312811 ABF--08-L12.b1 ABF3-overexpressing t... 50 0.002
gb|CF313260.1|CF313260 HD--01-F07.b1 OsHDAC1-overexpressing... 50 0.002
gb|CF313513.1|CF313513 HD--01-K18.b1 OsHDAC1-overexpressing... 50 0.002
gb|CF316217.1|CF316217 HD--05-G20.b1 OsHDAC1-overexpressing... 50 0.002
gb|CF319582.1|CF319582 HD--10-C06.b1 OsHDAC1-overexpressing... 50 0.002
gb|CF323004.1|CF323004 HDN--02-K16.g1 OsHDAC1-overexpressin... 50 0.002
gb|CF325753.1|CF325753 JMT1--04-B20.g1 AtJMT-overexpressing... 50 0.002
gb|CF329067.1|CF329067 NACL--04-E03.b1 Rice callus plasmid ... 50 0.002
gb|CF329351.1|CF329351 NACL--04-K09.g1 Rice callus plasmid ... 50 0.002
gb|CF329736.1|CF329736 NACL--05-C18.b1 Rice callus plasmid ... 50 0.002
gb|CF330696.1|CF330696 NACL--06-I07.b1 Rice callus plasmid ... 50 0.002
gb|CF332572.1|CF332572 JMT--01-C04.b1 AtJMT-overexpressing ... 50 0.002
gb|CF333901.1|CF333901 JMT--02-P20.b1 AtJMT-overexpressing ... 50 0.002
gb|CF335289.1|CF335289 JMT--04-O15.b1 AtJMT-overexpressing ... 50 0.002
gb|CF337161.1|CF337161 JMT--07-H23.b1 AtJMT-overexpressing ... 50 0.002
gb|CV722638.1|CV722638 root--01-C02.g1 Rice root lambda pha... 50 0.002
gb|CV722798.1|CV722798 root--01-J14.g1 Rice root lambda pha... 50 0.002
gb|CV724361.1|CV724361 root--06-M09.g1 Rice root lambda pha... 50 0.002
gb|CV726609.1|CV726609 14Salt--04-F15.b1 Salt treated rice ... 50 0.002
gb|CV728331.1|CV728331 14Salt--06-P18.g1 Salt treated rice ... 50 0.002
gb|CV729394.1|CV729394 FLO--02-E06.b1 Rice flower lambda ph... 50 0.002
gb|CV731069.1|CV731069 FLO--04-O20.g1 Rice flower lambda ph... 50 0.002
gb|BP184455.1|BP184455 BP184455 pNS rice panicle cDNA, flow... 50 0.002
gb|BP184600.1|BP184600 BP184600 pNS rice panicle cDNA, flow... 50 0.002
gb|BP184978.1|BP184978 BP184978 pNS rice callus cDNA Oryza ... 50 0.002
gb|BP184989.1|BP184989 BP184989 pNS rice callus cDNA Oryza ... 50 0.002
gb|BP185004.1|BP185004 BP185004 pNS rice callus cDNA Oryza ... 50 0.002
gb|BP185018.1|BP185018 BP185018 pNS rice callus cDNA Oryza ... 50 0.002
gb|BP185028.1|BP185028 BP185028 pNS rice callus cDNA Oryza ... 50 0.002
dbj|AK060223.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK061304.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK061838.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK063773.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK064620.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK064635.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK067309.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK073944.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK099489.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK103453.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK104194.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK104795.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK107092.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK108376.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J1... 50 0.002
dbj|AP005399.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AF309378.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
gb|AF309379.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
gb|AF402795.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
gb|AF402799.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
gb|AF402802.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
gb|AF402804.1| Oryza sativa (japonica cultivar-group) clone... 50 0.002
dbj|AP005676.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01020196.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021969.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021970.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021972.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01033500.1| Oryza sativa (japonica cultivar-group) C... 50 0.002
ref|NM_197443.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197445.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197462.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197473.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197475.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197476.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197486.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|NM_197487.1| Oryza sativa (japonica cultivar-group) put... 50 0.002
ref|XM_450940.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 50 0.002
ref|XM_506667.2| PREDICTED Oryza sativa (japonica cultivar-... 50 0.002
ref|XM_507428.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.002
gb|D16067.1|D16067 RICC2804A Rice callus Oryza sativa (japo... 48 0.008
gb|D23204.1|D23204 RICC2421A Rice callus Oryza sativa (japo... 48 0.008
gb|CB661508.1|CB661508 OSJNEd04H16.f OSJNEd Oryza sativa (j... 48 0.008
gb|CB661509.1|CB661509 OSJNEd04H16.r OSJNEd Oryza sativa (j... 48 0.008
gb|CF293809.1|CF293809 30DGS--03-B23.g1 Rice leaf plasmid c... 48 0.008
gb|CF300449.1|CF300449 7LEAF--04-N16.g1 Rice leaf plasmid c... 48 0.008
gb|CF322232.1|CF322232 HD--13-M05.b1 OsHDAC1-overexpressing... 48 0.008
gb|CV729669.1|CV729669 FLO--02-M13.b1 Rice flower lambda ph... 48 0.008
gb|CV730099.1|CV730099 FLO--03-H12.b1 Rice flower lambda ph... 48 0.008
gb|BP185011.1|BP185011 BP185011 pNS rice callus cDNA Oryza ... 48 0.008
dbj|AK105198.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.008
gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08... 48 0.008
gb|AY533124.1| Oryza sativa (japonica cultivar-group) gluta... 48 0.008
gb|AY533125.1| Oryza sativa (japonica cultivar-group) gluta... 48 0.008
gb|AY541763.1| Oryza sativa (japonica cultivar-group) gluta... 48 0.008
gb|AF309380.1| Oryza sativa (japonica cultivar-group) clone... 48 0.008
dbj|AP003569.3| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|AACV01013348.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01021354.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
ref|NM_196091.1| Oryza sativa (japonica cultivar-group) put... 48 0.008
ref|NM_197489.1| Oryza sativa (japonica cultivar-group) put... 48 0.008
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 48 0.008
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 48 0.008
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|CB665724.1|CB665724 OSJNEd12E20.r OSJNEd Oryza sativa (j... 44 0.13
gb|CF310301.1|CF310301 ABF--04-O01.g1 ABF3-overexpressing t... 44 0.13
emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC O... 44 0.13
emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC O... 44 0.13
dbj|AP005673.3| Oryza sativa (japonica cultivar-group) geno... 44 0.13
dbj|AP005880.4| Oryza sativa (japonica cultivar-group) geno... 44 0.13
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 44 0.13
gb|AACV01007243.1| Oryza sativa (japonica cultivar-group) c... 44 0.13
gb|AACV01015742.1| Oryza sativa (japonica cultivar-group) c... 44 0.13
gb|AACV01023890.1| Oryza sativa (japonica cultivar-group) c... 44 0.13
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
gb|CH401222.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 44 0.13
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.13
>dbj|AK069037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004F17, full
insert sequence
Length = 1149
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 67 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 126
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 127 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 183
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 184 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 243
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 244 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 300
>dbj|AK121363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124N01, full
insert sequence
Length = 2242
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 69 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 128
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 129 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 185
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 186 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 245
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 246 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 302
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 89 cctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcgagct 148
|||||||||||||| |||||||| |||||||| ||||| | ||| ||||||||| ||
Sbjct: 1543 cctgaaaggcgtgcgatacgagctcatcctggaagacct---ccgcaacaagagcgacct 1599
Query: 149 cctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgac 203
|||||| ||||||||||||| |||||| || ||||| |||||||| ||||||
Sbjct: 1600 gctgctcaaccacaaccccgtccacaagctcgtccccgtcctcctccatggcgac 1654
>gb|AACV01003051.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003051, whole
genome shotgun sequence
Length = 11481
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Minus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 5200 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 5141
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 5140 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 5084
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 5083 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 5024
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 5023 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 4967
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 3405 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 3347
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 3346 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 3289
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 3288 cctcctccatggcgac 3273
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Minus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 1016 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 960
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 959 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 919
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 329 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 284
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 41913044 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 41913103
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 41913104 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 41913160
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 41913161 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 41913220
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 41913221 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 41913277
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 41920800 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 41920859
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 41920860 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 41920916
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 41920917 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 41920976
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 41920977 cgacgccttc 41920986
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 41927105 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 41927164
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 41927165 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 41927221
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 41927222 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 41927281
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 41914839 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 41914897
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 41914898 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 41914955
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 41914956 cctcctccatggcgac 41914971
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 41917228 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 41917284
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 41917285 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 41917325
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 41919982 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 41920028
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||||||||||||||| | |||||| |||||||||||||| ||||| ||| |||
Sbjct: 28641412 gcaagagcgagctcctgctcaagagcaacccggtgcacaagaaggtccccgtcctcatcc 28641353
Query: 196 a 196
|
Sbjct: 28641352 a 28641352
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 41927304 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 41927339
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 41919615 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 41919671
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 41919672 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 41919713
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 41917915 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 41917960
>ref|XM_463733.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 717
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 15 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 74
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 75 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 131
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 132 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 191
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 192 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 248
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 1541338 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 1541397
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 1541398 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 1541454
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 1541455 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 1541514
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 1541515 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 1541571
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 1549094 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 1549153
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 1549154 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 1549210
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 1549211 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 1549270
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 1549271 cgacgccttc 1549280
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 1555399 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 1555458
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 1555459 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 1555515
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 1555516 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 1555575
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 1543133 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 1543191
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 1543192 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 1543249
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 1543250 cctcctccatggcgac 1543265
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 1545522 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 1545578
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 1545579 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 1545619
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 1548276 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 1548322
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 1555598 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 1555633
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 1547909 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 1547965
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 1547966 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 1548007
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 1546209 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 1546254
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1147A04
Length = 150053
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 75750 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 75809
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 75810 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 75866
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 75867 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 75926
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 75927 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 75983
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 83506 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 83565
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 83566 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 83622
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 83623 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 83682
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 83683 cgacgccttc 83692
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 89811 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 89870
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 89871 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 89927
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 89928 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 89987
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 77545 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 77603
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 77604 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 77661
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 77662 cctcctccatggcgac 77677
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 79934 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 79990
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 79991 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 80031
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 82688 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 82734
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 90010 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 90045
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 82321 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 82377
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 82378 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 82419
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 80621 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 80666
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 16026182 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 16026241
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 16026242 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 16026298
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 16026299 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 16026358
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 16026359 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 16026415
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 16033984 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 16034043
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 16034044 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 16034100
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 16034101 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 16034160
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 16034161 cgacgccttc 16034170
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 16040289 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 16040348
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 16040349 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 16040405
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 16040406 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 16040465
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 16027977 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 16028035
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 16028036 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 16028093
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 16028094 cctcctccatggcgac 16028109
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 16030366 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 16030422
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 16030423 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 16030463
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 16033167 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 16033213
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||||||||||||||| | |||||| |||||||||||||| ||||| ||| |||
Sbjct: 3027287 gcaagagcgagctcctgctcaagagcaacccggtgcacaagaaggtccccgtcctcatcc 3027228
Query: 196 a 196
|
Sbjct: 3027227 a 3027227
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 16040488 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 16040523
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 16032800 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 16032856
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 16032857 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 16032898
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 16031053 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 16031098
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 41227903 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 41227962
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 41227963 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 41228019
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 41228020 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 41228079
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 41228080 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 41228136
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 41235705 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 41235764
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 41235765 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 41235821
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 41235822 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 41235881
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 41235882 cgacgccttc 41235891
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 41242010 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 41242069
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 41242070 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 41242126
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 41242127 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 41242186
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 41229698 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 41229756
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 41229757 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 41229814
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 41229815 cctcctccatggcgac 41229830
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 41232087 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 41232143
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 41232144 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 41232184
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 41234888 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 41234934
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||||||||||||||| | |||||| |||||||||||||| ||||| ||| |||
Sbjct: 28229008 gcaagagcgagctcctgctcaagagcaacccggtgcacaagaaggtccccgtcctcatcc 28228949
Query: 196 a 196
|
Sbjct: 28228948 a 28228948
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 41242209 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 41242244
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 41234521 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 41234577
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 41234578 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 41234619
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 41232774 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 41232819
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 149 bits (75), Expect = 3e-033
Identities = 197/237 (83%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 26 gccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgct 85
||||||||||||||||||| ||||||||||||| || ||| | |||| || ||
Sbjct: 41832374 gccggtgaagctgatcggcgctttcggcagcccgttcgtccaccgtgtcgaggtcgccct 41832433
Query: 86 gtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcga 145
| |||||||||| ||||| |||||||| ||||| |||||| || |||| |||||||||
Sbjct: 41832434 gcgcctgaaaggagtgccctacgagctcatcctcgaggacatg---ggcaacaagagcga 41832490
Query: 146 gctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacgg 205
|||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||| |
Sbjct: 41832491 gctcctcctcgcgcacaaccccgtccacaagatggtccccgtgctcctccacggcgaccg 41832550
Query: 206 ccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
| ||||||| |||||| || ||||||| |||||||||||||||||| ||||||||
Sbjct: 41832551 ctccgccatctgcgagtcgctggtcatcgtcgagtacgtcgacgaggcgttcgacgg 41832607
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 41840130 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 41840189
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 41840190 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 41840246
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 41840247 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 41840306
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 41840307 cgacgccttc 41840316
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 41846435 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 41846494
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 41846495 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 41846551
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 41846552 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 41846611
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 41834169 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 41834227
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 41834228 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 41834285
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 41834286 cctcctccatggcgac 41834301
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 41836558 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 41836614
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 41836615 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 41836655
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 41839312 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 41839358
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||||||||||||||| | |||||| |||||||||||||| ||||| ||| |||
Sbjct: 28560742 gcaagagcgagctcctgctcaagagcaacccggtgcacaagaaggtccccgtcctcatcc 28560683
Query: 196 a 196
|
Sbjct: 28560682 a 28560682
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 41846634 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 41846669
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 41838945 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 41839001
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 41839002 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 41839043
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 41837245 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 41837290
>dbj|AK064627.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-F04, full
insert sequence
Length = 899
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 67 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 126
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 127 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 183
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 184 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 243
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 244 cgacgccttc 253
>gb|AACV01003052.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003052, whole
genome shotgun sequence
Length = 28907
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 2503 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 2562
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 2563 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 2619
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 2620 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 2679
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 2680 cgacgccttc 2689
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 8808 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 8867
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 8868 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 8924
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 8925 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 8984
Score = 61.9 bits (31), Expect = 6e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 421 cgctgctggaggcgcagctcgagggaaagaggttcttcgccggcgac 467
|||| |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 1686 cgctactggaggcacagctcgaggggaagaggttctttgccggcgac 1732
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 9007 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 9042
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/102 (82%), Gaps = 3/102 (2%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| || ||||||||||| ||||| |||||| | |||| |||| || |||| |||
Sbjct: 1319 caaccctgtccacaagaaggtccccgtcctcctcgatggcg---gccgagctatctgcga 1375
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| || ||||||| ||||||||||||||| || ||||||||
Sbjct: 1376 atcacttgtcatcgtcgagtacgtcgacgacgcattcgacgg 1417
>ref|XM_463737.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 708
Score = 119 bits (60), Expect = 3e-024
Identities = 158/190 (83%), Gaps = 3/190 (1%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| ||||||||||| | ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 42 ccgcgccgaggcggcgctccggctgaaaggcgtgcagtacgagctcctcctggaagacct 101
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
| ||||||||||||| || |||||| |||||||||||| |||||| || |||||
Sbjct: 102 ---ccgcagcaagagcgacctgctgctcgcccacaaccccgtccacaagctcgtccccgt 158
Query: 188 gctcctccacggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcga 247
||||||||| ||||||||| || || |||||||||||||| ||| | ||||||||||
Sbjct: 159 cctcctccactccgacggccgctccgtcgccgagtccctcgtcgtcgtccagtacgtcga 218
Query: 248 cgaggccttc 257
||| ||||||
Sbjct: 219 cgacgccttc 228
>gb|CB680229.1|CB680229 OSJNEf04K17.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf04K17 5', mRNA sequence
Length = 836
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 26 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 85
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 86 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 142
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 143 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 202
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 225 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 260
>dbj|AK107822.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G02, full
insert sequence
Length = 860
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 59 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 118
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 119 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 175
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 176 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 235
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 258 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 293
>dbj|AK109284.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C01, full
insert sequence
Length = 982
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Minus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 756 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 697
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 696 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 640
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 639 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 580
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 557 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 522
>ref|XM_463739.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 717
Score = 107 bits (54), Expect = 1e-020
Identities = 149/180 (82%), Gaps = 3/180 (1%)
Strand = Plus / Plus
Query: 25 cgccggtgaagctgatcggcttcttcggcagcccgtacgcgttccgcgcggaggcggcgc 84
||||||||||| |||||||| ||||| |||||||||| ||||||||||| || |
Sbjct: 20 cgccggtgaaggtgatcggcaccttcgacagcccgtacagccaacgcgcggaggccgccc 79
Query: 85 tgtgcctgaaaggcgtgccgtacgagctgatcctggaggacctgttcggcagcaagagcg 144
|| | || || |||||||| |||||||| |||||||||||||| | ||| ||||||||
Sbjct: 80 tgcggctcaagggcgtgccatacgagctcatcctggaggacct---ccgcaacaagagcg 136
Query: 145 agctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccacggcgacg 204
| || |||||| |||||||||| | ||||||||||| ||||| ||||||||||||||||
Sbjct: 137 acctgctgctcacccacaaccccatccacaagaaggtccccgtcctcctccacggcgacg 196
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 218 cgagtccctcgtcatcgccgagtacgtcgacgaggc 253
||||||||| ||||||| ||||||||||||||||||
Sbjct: 219 cgagtcccttgtcatcgtcgagtacgtcgacgaggc 254
>gb|AQ688928.1|AQ688928 nbxb0078J07r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0078J07r, DNA sequence
Length = 585
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 271 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 212
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 211 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 159
>gb|CV723538.1|CV723538 root--03-O05.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--03-O05, mRNA sequence
Length = 214
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 56 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 114
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 115 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 172
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 173 cctcctccatggcgac 188
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence,
complete sequence
Length = 148611
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 4031 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 4090
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 4091 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 4143
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 73531 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 73472
Query: 197 c 197
|
Sbjct: 73471 c 73471
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 10423 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 10364
Query: 197 cggcg 201
|||||
Sbjct: 10363 cggcg 10359
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 52290 caacccggtgcacaagaaggtgcccgtgctcatccac 52254
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 37377 caacccggtgcacaagaaggtgcccgtgctcatccac 37341
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 19754 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 19695
Query: 197 c 197
|
Sbjct: 19694 c 19694
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 7066 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 7125
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 7126 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 7181
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 142364 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 142422
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 142423 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 142475
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 129148 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 129089
Query: 197 c 197
|
Sbjct: 129088 c 129088
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 75930 caacccggtgaacaagaaggtgcccgtgctcatccac 75894
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 70764 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 70705
Query: 197 c 197
|
Sbjct: 70704 c 70704
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 67559 caacccggtgcacaagaaggtacccgtgctcatccac 67523
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 32104 caacccggtgcacaagacggtgcccgtgctcatccac 32068
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 30077 caacccggtgcacaagacggtgcccgtgctcatccac 30041
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 26261 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 26210
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
sequence
Length = 132900
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 62332 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 62391
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 62392 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 62444
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 131832 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 131773
Query: 197 c 197
|
Sbjct: 131772 c 131772
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 68724 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 68665
Query: 197 cggcg 201
|||||
Sbjct: 68664 cggcg 68660
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 110591 caacccggtgcacaagaaggtgcccgtgctcatccac 110555
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 95678 caacccggtgcacaagaaggtgcccgtgctcatccac 95642
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 78055 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 77996
Query: 197 c 197
|
Sbjct: 77995 c 77995
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 65367 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 65426
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 65427 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 65482
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 54359 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 54303
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 54302 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 54265
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 56412 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 56353
Query: 196 ac 197
||
Sbjct: 56352 ac 56351
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 129065 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 129006
Query: 197 c 197
|
Sbjct: 129005 c 129005
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 125860 caacccggtgcacaagaaggtacccgtgctcatccac 125824
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 90405 caacccggtgcacaagacggtgcccgtgctcatccac 90369
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 88378 caacccggtgcacaagacggtgcccgtgctcatccac 88342
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 84562 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 84511
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 56323 gtcatcgtcgagtacgtcgacgaggc 56298
>gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone RICS12005A putative
glutathione S-transferase OsGSTU13 mRNA, complete cds
Length = 998
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 191 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 250
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 251 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 303
>gb|AACV01021984.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021984, whole
genome shotgun sequence
Length = 35666
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 31794 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 31735
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 31734 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 31682
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 25402 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 25461
Query: 197 cggcg 201
|||||
Sbjct: 25462 cggcg 25466
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 28759 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 28700
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 28699 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 28644
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 16068 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 16127
Query: 197 c 197
|
Sbjct: 16128 c 16128
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 5725 caacccggtgcacaagacggtgcccgtgctcatccac 5761
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 3697 caacccggtgcacaagacggtgcccgtgctcatccac 3733
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 9542 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 9593
>ref|NM_197497.1| Oryza sativa (japonica cultivar-group) putative glutathione
S-transferase (OSJNBa0034L04.1), mRNA
Length = 914
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 126 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 185
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 186 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 238
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 2026353 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 2026294
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 2026293 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 2026241
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 2019961 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 2020020
Query: 197 cggcg 201
|||||
Sbjct: 2020021 cggcg 2020025
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 1956853 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 1956912
Query: 197 c 197
|
Sbjct: 1956913 c 1956913
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 2023318 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 2023259
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 2023258 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 2023203
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 2010630 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 2010689
Query: 197 c 197
|
Sbjct: 2010690 c 2010690
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 1993007 caacccggtgcacaagaaggtgcccgtgctcatccac 1993043
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 1978094 caacccggtgcacaagaaggtgcccgtgctcatccac 1978130
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 2034326 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 2034382
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 2034383 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 2034420
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 2032273 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 2032332
Query: 196 ac 197
||
Sbjct: 2032333 ac 2032334
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 2000307 caacccggtgcacaagacggtgcccgtgctcatccac 2000343
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 1998280 caacccggtgcacaagacggtgcccgtgctcatccac 1998316
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 1962825 caacccggtgcacaagaaggtacccgtgctcatccac 1962861
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 1959620 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 1959679
Query: 197 c 197
|
Sbjct: 1959680 c 1959680
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 1954454 caacccggtgaacaagaaggtgcccgtgctcatccac 1954490
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 1901236 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 1901295
Query: 197 c 197
|
Sbjct: 1901296 c 1901296
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 1888020 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 1887962
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 1887961 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 1887909
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 1852919 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 1852861
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 1852860 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 1852808
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 1841089 caacccggtgcacaagaaggttcccgtgctcatccac 1841125
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 1835988 aagagcgagctgctgctccggtccaacccggtgcacaagaagttccccgtgctgctcca- 1835930
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| || || | || || ||||||| |||||||||| ||||||| |||||||||
Sbjct: 1835929 --ccacagcaagcccctccccgagtctctcgtcatcgtcgagtacatcgacgagg 1835877
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 2004123 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 2004174
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 2032362 gtcatcgtcgagtacgtcgacgaggc 2032387
>ref|XM_463734.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 684
Score = 83.8 bits (42), Expect = 2e-013
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 68 ccgcgcggaggcggcgctgtgcctgaaaggcgtgccgtacgagctgatcctggaggacct 127
|||||| |||| |||||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct: 51 ccgcgcagaggtggcgcttcgcctgaaaggcgtgcgatacgagctcatcctggaagacc- 109
Query: 128 gttcggcagcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgt 187
|| ||| ||||||||| || |||||| ||||||||||||| |||||| || |||||
Sbjct: 110 --tccgcaacaagagcgacctgctgctcaaccacaaccccgtccacaagctcgtccccgt 167
Query: 188 gctcctccacggcgac 203
|||||||| ||||||
Sbjct: 168 cctcctccatggcgac 183
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 8064599 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 8064540
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 8064539 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 8064487
Score = 67.9 bits (34), Expect = 9e-009
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||| | |||||||| |||||| ||| || | ||||||||||
Sbjct: 5577646 caacccggtgcacaagaagatccccgtgctgctccaccgcg---gcaagcccatctccga 5577590
Query: 221 gtccctcgtcatcgccgagtacgtcgacgagg 252
|||||||||||||| |||||||||||||||
Sbjct: 5577589 gtccctcgtcatcgtgcagtacgtcgacgagg 5577558
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 8058207 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 8058266
Query: 197 cggcg 201
|||||
Sbjct: 8058267 cggcg 8058271
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 7999627 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 7999686
Query: 197 c 197
|
Sbjct: 7999687 c 7999687
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 8061564 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 8061505
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 8061504 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 8061449
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 8048873 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 8048932
Query: 197 c 197
|
Sbjct: 8048933 c 8048933
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 8031218 caacccggtgcacaagaaggtgcccgtgctcatccac 8031254
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 8021825 caacccggtgcacaagaaggtgcccgtgctcatccac 8021861
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 8072971 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 8073027
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 8073028 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 8073065
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 8070918 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 8070977
Query: 196 ac 197
||
Sbjct: 8070978 ac 8070979
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 8038530 caacccggtgcacaagacggtgcccgtgctcatccac 8038566
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 8036502 caacccggtgcacaagacggtgcccgtgctcatccac 8036538
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 8005598 caacccggtgcacaagaaggtacccgtgctcatccac 8005634
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 8002394 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 8002453
Query: 197 c 197
|
Sbjct: 8002454 c 8002454
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 7997228 caacccggtgaacaagaaggtgcccgtgctcatccac 7997264
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 7945867 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 7945926
Query: 197 c 197
|
Sbjct: 7945927 c 7945927
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 7930184 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 7930126
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 7930125 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 7930073
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 7915870 aagagcgagctgctgctccggtccaacccggtgcacaagaagttccccgtgctgctcca- 7915812
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| || || | || || ||||||| |||||||||| ||||||| |||||||||
Sbjct: 7915811 --ccacagcaagcccctccccgagtctctcgtcatcgtcgagtacatcgacgagg 7915759
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 8042347 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 8042398
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 8071007 gtcatcgtcgagtacgtcgacgaggc 8071032
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 18930393 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 18930334
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 18930333 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 18930281
Score = 67.9 bits (34), Expect = 9e-009
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||| | |||||||| |||||| ||| || | ||||||||||
Sbjct: 16443440 caacccggtgcacaagaagatccccgtgctgctccaccgcg---gcaagcccatctccga 16443384
Query: 221 gtccctcgtcatcgccgagtacgtcgacgagg 252
|||||||||||||| |||||||||||||||
Sbjct: 16443383 gtccctcgtcatcgtgcagtacgtcgacgagg 16443352
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 18924001 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 18924060
Query: 197 cggcg 201
|||||
Sbjct: 18924061 cggcg 18924065
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 18865421 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 18865480
Query: 197 c 197
|
Sbjct: 18865481 c 18865481
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 18927358 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 18927299
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 18927298 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 18927243
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 18914667 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 18914726
Query: 197 c 197
|
Sbjct: 18914727 c 18914727
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 18897012 caacccggtgcacaagaaggtgcccgtgctcatccac 18897048
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 18887619 caacccggtgcacaagaaggtgcccgtgctcatccac 18887655
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 18938765 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 18938821
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 18938822 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 18938859
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 18936712 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 18936771
Query: 196 ac 197
||
Sbjct: 18936772 ac 18936773
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 18904324 caacccggtgcacaagacggtgcccgtgctcatccac 18904360
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 18902296 caacccggtgcacaagacggtgcccgtgctcatccac 18902332
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 18871392 caacccggtgcacaagaaggtacccgtgctcatccac 18871428
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 18868188 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 18868247
Query: 197 c 197
|
Sbjct: 18868248 c 18868248
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 18863022 caacccggtgaacaagaaggtgcccgtgctcatccac 18863058
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 18811661 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 18811720
Query: 197 c 197
|
Sbjct: 18811721 c 18811721
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 18795978 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 18795920
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 18795919 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 18795867
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 18781664 aagagcgagctgctgctccggtccaacccggtgcacaagaagttccccgtgctgctcca- 18781606
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| || || | || || ||||||| |||||||||| ||||||| |||||||||
Sbjct: 18781605 --ccacagcaagcccctccccgagtctctcgtcatcgtcgagtacatcgacgagg 18781553
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 18908141 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 18908192
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||| |||||||||||||| ||||||||| |||||
Sbjct: 10231077 aacccggtgcacaagaaggtccccgtgctcatccac 10231112
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 18936801 gtcatcgtcgagtacgtcgacgaggc 18936826
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 20104159 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 20104100
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 20104099 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 20104047
Score = 67.9 bits (34), Expect = 9e-009
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||| | |||||||| |||||| ||| || | ||||||||||
Sbjct: 17634381 caacccggtgcacaagaagatccccgtgctgctccaccgcg---gcaagcccatctccga 17634325
Query: 221 gtccctcgtcatcgccgagtacgtcgacgagg 252
|||||||||||||| |||||||||||||||
Sbjct: 17634324 gtccctcgtcatcgtgcagtacgtcgacgagg 17634293
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 20097767 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 20097826
Query: 197 cggcg 201
|||||
Sbjct: 20097827 cggcg 20097831
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 20034659 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 20034718
Query: 197 c 197
|
Sbjct: 20034719 c 20034719
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 20101124 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 20101065
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 20101064 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 20101009
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 20088436 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 20088495
Query: 197 c 197
|
Sbjct: 20088496 c 20088496
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 20070813 caacccggtgcacaagaaggtgcccgtgctcatccac 20070849
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 20055900 caacccggtgcacaagaaggtgcccgtgctcatccac 20055936
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 20112132 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 20112188
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 20112189 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 20112226
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 20110079 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 20110138
Query: 196 ac 197
||
Sbjct: 20110139 ac 20110140
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 20078113 caacccggtgcacaagacggtgcccgtgctcatccac 20078149
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 20076086 caacccggtgcacaagacggtgcccgtgctcatccac 20076122
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 20040631 caacccggtgcacaagaaggtacccgtgctcatccac 20040667
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 20037426 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 20037485
Query: 197 c 197
|
Sbjct: 20037486 c 20037486
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 20032260 caacccggtgaacaagaaggtgcccgtgctcatccac 20032296
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 19979042 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 19979101
Query: 197 c 197
|
Sbjct: 19979102 c 19979102
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19965826 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 19965768
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 19965767 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 19965715
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19930725 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 19930667
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 19930666 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 19930614
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 19918895 caacccggtgcacaagaaggttcccgtgctcatccac 19918931
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19913794 aagagcgagctgctgctccggtccaacccggtgcacaagaagttccccgtgctgctcca- 19913736
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| || || | || || ||||||| |||||||||| ||||||| |||||||||
Sbjct: 19913735 --ccacagcaagcccctccccgagtctctcgtcatcgtcgagtacatcgacgagg 19913683
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 20081929 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 20081980
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||| |||||||||||||| ||||||||| |||||
Sbjct: 11022019 aacccggtgcacaagaaggtccccgtgctcatccac 11022054
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 20110168 gtcatcgtcgagtacgtcgacgaggc 20110193
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 83.8 bits (42), Expect = 2e-013
Identities = 98/116 (84%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||||| ||||||||| ||||
Sbjct: 20115435 caagagcgagctcctcctcacctccaacccggtgcacaagaaggtccccgtgctcatcca 20115376
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
||||| || | ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 20115375 cggcg---gcaagcccatctccgagtcgctcgtcatcgtgcagtacgtcgacgagg 20115323
Score = 67.9 bits (34), Expect = 9e-009
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||| | |||||||| |||||| ||| || | ||||||||||
Sbjct: 17643421 caacccggtgcacaagaagatccccgtgctgctccaccgcg---gcaagcccatctccga 17643365
Query: 221 gtccctcgtcatcgccgagtacgtcgacgagg 252
|||||||||||||| |||||||||||||||
Sbjct: 17643364 gtccctcgtcatcgtgcagtacgtcgacgagg 17643333
Score = 65.9 bits (33), Expect = 4e-008
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| || | |||||| |||||||||||||||||||||||| ||||
Sbjct: 20109043 caagagcgagctcctcgtcgtctccaacccggtgcacaagaaggtgcccgtgctcatcca 20109102
Query: 197 cggcg 201
|||||
Sbjct: 20109103 cggcg 20109107
Score = 65.9 bits (33), Expect = 4e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||
Sbjct: 20045935 caagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatcca 20045994
Query: 197 c 197
|
Sbjct: 20045995 c 20045995
Score = 58.0 bits (29), Expect = 9e-006
Identities = 97/119 (81%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||| ||| ||||
Sbjct: 20112400 caagagcgagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 20112341
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|||| || | || |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 20112340 tggcg---gcaagcccgtctccgagtcgctcgtcatcgtgcagtacgtcgacgaggcct 20112285
Score = 58.0 bits (29), Expect = 9e-006
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||||||| ||||||||| ||||||||||||||
Sbjct: 20099712 caagagcgagctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctcca 20099771
Query: 197 c 197
|
Sbjct: 20099772 c 20099772
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 20082089 caacccggtgcacaagaaggtgcccgtgctcatccac 20082125
Score = 58.0 bits (29), Expect = 9e-006
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||||||||||||| |||||
Sbjct: 20067176 caacccggtgcacaagaaggtgcccgtgctcatccac 20067212
Score = 56.0 bits (28), Expect = 3e-005
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccga 220
|||||| |||||||||||||| ||||||||| |||| | ||||| | ||||| ||||
Sbjct: 20123408 caacccggtgcacaagaaggtccccgtgctcatcca---caacggcaagcccatcgccga 20123464
Query: 221 gtccctcgtcatcgccgagtacgtcgacgaggccttcg 258
||| | ||||||| |||||| |||||||||||||||
Sbjct: 20123465 gtcgcgggtcatcgtggagtacctcgacgaggccttcg 20123502
Score = 52.0 bits (26), Expect = 5e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 136 gcaagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcc 195
|||||||| ||||||| ||| || |||||| ||||||||| ||||||||||||| |||
Sbjct: 20121355 gcaagagcaagctcctcctcgacagcaacccggtgcacaagtcggtgcccgtgctcatcc 20121414
Query: 196 ac 197
||
Sbjct: 20121415 ac 20121416
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 20089389 caacccggtgcacaagacggtgcccgtgctcatccac 20089425
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||| ||||||||||||| |||||
Sbjct: 20087362 caacccggtgcacaagacggtgcccgtgctcatccac 20087398
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 20051907 caacccggtgcacaagaaggtacccgtgctcatccac 20051943
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| |||||||||||| | ||||||||| ||||
Sbjct: 20048702 caagagcgagctcctcctcgcctccaacccggtgcacaagaagatccccgtgctcatcca 20048761
Query: 197 c 197
|
Sbjct: 20048762 c 20048762
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| ||| |||||||||||||||||||| |||||
Sbjct: 20043536 caacccggtgaacaagaaggtgcccgtgctcatccac 20043572
Score = 50.1 bits (25), Expect = 0.002
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||||||||| ||| | |||||| ||| |||||||||||||||| ||| ||||
Sbjct: 19990318 caagagcgagctcctcctcagctccaacccggtgaacaagaaggtgcccgtcctcatcca 19990377
Query: 197 c 197
|
Sbjct: 19990378 c 19990378
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19977102 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 19977044
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 19977043 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 19976991
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19942001 aagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctcca- 19941943
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| ||||| | ||||| ||||||| ||| |||||| | ||||| |||||||||
Sbjct: 19941942 --ccacggcaagcccatcgccgagtctctcatcatcgtctagtacatcgacgagg 19941890
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 caaccccgtgcacaagaaggtgcccgtgctcctccac 197
|||||| |||||||||||||| ||||||||| |||||
Sbjct: 19930171 caacccggtgcacaagaaggttcccgtgctcatccac 19930207
Score = 50.1 bits (25), Expect = 0.002
Identities = 93/115 (80%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 138 aagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||||||||| ||||||| |||||| |||||||||||| | |||||||| |||||
Sbjct: 19925070 aagagcgagctgctgctccggtccaacccggtgcacaagaagttccccgtgctgctcca- 19925012
Query: 198 ggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgagg 252
| || || | || || ||||||| |||||||||| ||||||| |||||||||
Sbjct: 19925011 --ccacagcaagcccctccccgagtctctcgtcatcgtcgagtacatcgacgagg 19924959
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtg 188
||||||||||||||| ||| | |||||| |||||||||||||| ||||||
Sbjct: 20093205 caagagcgagctcctcctcagctccaacccggtgcacaagaaggtccccgtg 20093256
Score = 48.1 bits (24), Expect = 0.008
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccac 197
||||| |||||||||||||| ||||||||| |||||
Sbjct: 11028459 aacccggtgcacaagaaggtccccgtgctcatccac 11028494
Score = 44.1 bits (22), Expect = 0.13
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gtcatcgccgagtacgtcgacgaggc 253
||||||| ||||||||||||||||||
Sbjct: 20121444 gtcatcgtcgagtacgtcgacgaggc 20121469
>gb|CA754695.1|CA754695 BR030004000_PLATE_G02_15_018.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030004000_PLATE_G02_15_018.ab1 similar to putative
glutathione S-transferase GST 24 [Oryza sativa (japonica
cultivar-group)], mRNA sequence
Length = 869
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 173 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 229
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 230 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 270
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 423 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 468
>gb|CV724487.1|CV724487 14Salt--01-B12.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-B12, mRNA sequence
Length = 488
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 191 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 247
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 248 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 288
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 441 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 486
>dbj|AK064612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B12, full
insert sequence
Length = 857
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 188 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 244
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 245 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 285
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 438 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 483
>ref|XM_463735.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 690
Score = 77.8 bits (39), Expect = 9e-012
Identities = 86/101 (85%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 162 aaccccgtgcacaagaaggtgcccgtgctcctccacggcgacggccgggccatctccgag 221
|||||| | ||||||||||| |||||||||||||| ||||| ||| ||||||| ||||
Sbjct: 142 aaccccatccacaagaaggtccccgtgctcctccatggcga---ccgtgccatctgcgag 198
Query: 222 tccctcgtcatcgccgagtacgtcgacgaggccttcgacgg 262
|| |||||||||| |||||||| ||||||| ||||||||
Sbjct: 199 tcgctcgtcatcgtcgagtacgcggacgaggtgttcgacgg 239
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 418 tggcgctgctggaggcgcagctcgagggaaagaggttcttcgccgg 463
||||||| ||||||||||||||| | || ||||||||||| |||||
Sbjct: 386 tggcgcttctggaggcgcagctccatgggaagaggttctttgccgg 431
>gb|AU069491.1|AU069491 AU069491 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62181_7A, mRNA sequence
Length = 526
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 179 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 238
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 239 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 290
>gb|CF290923.1|CF290923 14ROOT--01-C10.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-C10, mRNA sequence
Length = 538
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 226 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 285
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 286 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 337
>gb|CF291533.1|CF291533 14ROOT--01-P22.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-P22, mRNA sequence
Length = 556
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 226 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 285
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 286 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 337
>gb|CF291953.1|CF291953 14ROOT--02-J13.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-J13, mRNA sequence
Length = 542
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 222 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 281
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 282 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 333
>gb|CF292764.1|CF292764 30DGS--01-L09.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-L09, mRNA sequence
Length = 549
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 226 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 285
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 286 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 337
>gb|CF331397.1|CF331397 NACL--07-I05.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-I05, mRNA sequence
Length = 552
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 228 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 287
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 288 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 339
>dbj|AK103316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125H12, full
insert sequence
Length = 953
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 228 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 287
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 288 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 339
>gb|AF309377.1| Oryza sativa (japonica cultivar-group) clone C62181 putative
glutathione S-transferase OsGSTU5 mRNA, complete cds
Length = 949
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 190 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 249
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 250 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 301
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0564H06
Length = 146823
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1737 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 1678
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 1677 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 1626
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0441A12
Length = 185437
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 171838 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 171779
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 171778 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 171727
>gb|AACV01019786.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019786, whole
genome shotgun sequence
Length = 67936
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 6120 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 6179
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 6180 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 6231
>ref|XM_450661.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 943
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 218 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 277
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 278 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 329
>ref|XM_506655.1| PREDICTED Oryza sativa (japonica cultivar-group), P0441A12.52 mRNA
Length = 953
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 228 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 287
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 288 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 339
>ref|NT_107082.1| Oryza sativa (japonica cultivar-group)
Length = 2185602
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 701046 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 700987
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 700986 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 700935
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1455717 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 1455658
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 1455657 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 1455606
Score = 50.1 bits (25), Expect = 0.002
Identities = 96/119 (80%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||| ||||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 6989673 caagagcgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtcca 6989732
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|| ||||| | | || |||||||| |||||||| ||||||| ||||||||||||
Sbjct: 6989733 cg---acggcaagcctctcgccgagtccaccgtcatcgtcgagtacatcgacgaggcct 6989788
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 73.8 bits (37), Expect = 1e-010
Identities = 96/115 (83%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
||||||||| ||||| |||| | ||||||||| ||||||||||| ||||| ||||||||
Sbjct: 10929528 caagagcgacctcctcctccgctccaaccccgtccacaagaaggtccccgtcctcctcca 10929469
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgag 251
|| |||||| || ||| |||||||||||||||| ||||||| ||||||||
Sbjct: 10929468 ---cgccggccgccccgtctgcgagtccctcgtcatcctcgagtacatcgacgag 10929417
Score = 50.1 bits (25), Expect = 0.002
Identities = 96/119 (80%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 137 caagagcgagctcctgctccaccacaaccccgtgcacaagaaggtgcccgtgctcctcca 196
|||||||||| ||||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 16463484 caagagcgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtcca 16463543
Query: 197 cggcgacggccgggccatctccgagtccctcgtcatcgccgagtacgtcgacgaggcct 255
|| ||||| | | || |||||||| |||||||| ||||||| ||||||||||||
Sbjct: 16463544 cg---acggcaagcctctcgccgagtccaccgtcatcgtcgagtacatcgacgaggcct 16463599
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,347,263
Number of Sequences: 438736
Number of extensions: 1347263
Number of successful extensions: 12648
Number of sequences better than 0.5: 333
Number of HSP's better than 0.5 without gapping: 308
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 10649
Number of HSP's gapped (non-prelim): 1947
length of query: 911
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 890
effective length of database: 2,791,206,460
effective search space: 2484173749400
effective search space used: 2484173749400
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)