BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336950.2.1
(645 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (j... 327 4e-087
gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (j... 327 4e-087
gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (j... 327 4e-087
gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (j... 327 4e-087
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 327 4e-087
gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (j... 319 1e-084
gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (j... 313 6e-083
gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (j... 305 2e-080
gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (j... 303 6e-080
gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (j... 289 9e-076
gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (j... 289 9e-076
gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (j... 289 9e-076
gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressi... 289 9e-076
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 289 9e-076
gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (j... 287 4e-075
gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (j... 281 2e-073
gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (j... 258 3e-066
gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (j... 232 2e-058
gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (j... 226 1e-056
gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (j... 220 7e-055
gb|CB639189.1|CB639189 OSJNEa08L04.f OSJNEa Oryza sativa (j... 212 2e-052
gb|CB678077.1|CB678077 OSJNEe15K07.f OSJNEe Oryza sativa (j... 206 1e-050
gb|CB637776.1|CB637776 OSJNEa04P09.f OSJNEa Oryza sativa (j... 204 4e-050
gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (j... 200 7e-049
gb|CB637913.1|CB637913 OSJNEa05G23.f OSJNEa Oryza sativa (j... 176 1e-041
gb|CB639303.1|CB639303 OSJNEa09H24.f OSJNEa Oryza sativa (j... 165 4e-038
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 159 2e-036
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 149 2e-033
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 149 2e-033
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 149 2e-033
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 149 2e-033
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 149 2e-033
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 149 2e-033
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 149 2e-033
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 149 2e-033
gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (j... 145 3e-032
dbj|AG214514.1| Oryza sativa (japonica cultivar-group) DNA,... 139 2e-030
gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (j... 133 1e-028
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 133 1e-028
gb|CB637692.1|CB637692 OSJNEa04L18.f OSJNEa Oryza sativa (j... 125 3e-026
gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressi... 125 3e-026
gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (j... 107 7e-021
gb|CB676812.1|CB676812 OSJNEe13E16.f OSJNEe Oryza sativa (j... 107 7e-021
dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA... 101 5e-019
ref|XM_479599.1| Oryza sativa (japonica cultivar-group), mRNA 101 5e-019
gb|CB641392.1|CB641392 OSJNEb01A03.f OSJNEb Oryza sativa (j... 90 2e-015
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 86 3e-014
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|CG408882.1|CG408882 Ds576 Ds insertion lines Oryza sativ... 72 4e-010
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 64 1e-007
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
dbj|AK062739.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AP003818.2| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
dbj|AG023178.1| Oryza sativa (japonica cultivar-group) DNA,... 52 4e-004
gb|AACV01023904.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
dbj|AG024487.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.092
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.092
gb|AACV01006501.1| Oryza sativa (japonica cultivar-group) c... 44 0.092
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 44 0.092
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.092
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.092
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 44 0.092
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.092
>gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13K04 5', mRNA sequence
Length = 616
Score = 327 bits (165), Expect = 4e-087
Identities = 315/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 599 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 540
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 539 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 480
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 479 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 420
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 419 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 360
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 359 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 300
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 299 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 240
Query: 398 gaggc 402
|||||
Sbjct: 239 gaggc 235
>gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 5', mRNA sequence
Length = 839
Score = 327 bits (165), Expect = 4e-087
Identities = 315/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 589 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 530
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 529 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 470
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 469 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 410
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 409 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 350
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 349 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 290
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 289 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 230
Query: 398 gaggc 402
|||||
Sbjct: 229 gaggc 225
>gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04J07 5', mRNA sequence
Length = 814
Score = 327 bits (165), Expect = 4e-087
Identities = 315/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 552 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 493
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 492 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 433
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 432 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 373
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 372 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 313
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 312 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 253
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 252 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 193
Query: 398 gaggc 402
|||||
Sbjct: 192 gaggc 188
>gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12M09 5', mRNA sequence
Length = 851
Score = 327 bits (165), Expect = 4e-087
Identities = 315/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 597 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 538
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 537 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 478
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 477 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 418
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 417 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 358
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 357 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 298
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 297 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 238
Query: 398 gaggc 402
|||||
Sbjct: 237 gaggc 233
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 327 bits (165), Expect = 4e-087
Identities = 315/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 641 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 582
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 581 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 522
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 521 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 462
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 461 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 402
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 401 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 342
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 341 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 282
Query: 398 gaggc 402
|||||
Sbjct: 281 gaggc 277
>gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02F24 5', mRNA sequence
Length = 837
Score = 319 bits (161), Expect = 1e-084
Identities = 314/365 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 636 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 577
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 576 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 517
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||| | |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 516 tccatctttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 457
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 456 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 397
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 396 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 337
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 336 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 277
Query: 398 gaggc 402
|||||
Sbjct: 276 gaggc 272
>gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 5', mRNA sequence
Length = 592
Score = 313 bits (158), Expect = 6e-083
Identities = 308/358 (86%)
Strand = Plus / Minus
Query: 45 gtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatgccccaaa 104
|||| |||||| |||| || | |||||||| |||||| |||||||||||||||||||| |
Sbjct: 592 gtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatgccccaga 533
Query: 105 accctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacctccatcc 164
|||||||||| |||| ||||||||||||| || |||||||| || || ||||||||||
Sbjct: 532 accctgggttataaatgccaacaccaccagctgggcaattatcacagagaacctccatcc 473
Query: 165 tgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaatacagagg 224
| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||| || |
Sbjct: 472 ttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaatatggaag 413
Query: 225 agtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctccagctt 284
|||| || ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 412 agtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcctccagctt 353
Query: 285 caaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatct 344
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 352 caaaacctctgttactaacaagttcagcccatattccaccagcccctgcatggttgattt 293
Query: 345 cctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggcgaggc 402
||||||| || || || || ||||| |||||||||| |||||||| ||||| |||||
Sbjct: 292 cctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggtgaggc 235
>gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 5', mRNA sequence
Length = 843
Score = 305 bits (154), Expect = 2e-080
Identities = 274/314 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 316 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 257
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 256 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 197
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 196 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 137
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 136 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 77
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 76 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagcccctgcatgg 17
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 16 ttgatttcctcaaa 3
>gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 5', mRNA sequence
Length = 699
Score = 303 bits (153), Expect = 6e-080
Identities = 312/365 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
|||| |||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 531 gtttgtggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 472
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| |||||||| ||||| || |||||||| || || |||
Sbjct: 471 ccccagaaccctgggttataaatgccaacacctccagttgggcaattatcacagagaacc 412
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 411 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 352
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 351 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 292
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 291 ccagcttcaaaacctatgttattaacaagttcagcccatattccaccagcccctgcatgg 232
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 231 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 172
Query: 398 gaggc 402
|||||
Sbjct: 171 gaggc 167
>gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 5', mRNA sequence
Length = 736
Score = 289 bits (146), Expect = 9e-076
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 487 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 428
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 427 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 368
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 367 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 308
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 307 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 248
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 247 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctgcatgg 188
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 187 ttgatttcctcaaa 174
>gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 5', mRNA sequence
Length = 832
Score = 289 bits (146), Expect = 9e-076
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 616 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 557
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 556 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 497
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 496 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 437
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 436 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 377
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 376 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctgcatgg 317
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 316 ttgatttcctcaaa 303
>gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 5', mRNA sequence
Length = 752
Score = 289 bits (146), Expect = 9e-076
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 612 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 553
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 552 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 493
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 492 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 433
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 432 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 373
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 372 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctgcatgg 313
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 312 ttgatttcctcaaa 299
>gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-P15, mRNA sequence
Length = 669
Score = 289 bits (146), Expect = 9e-076
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 579 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 520
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 519 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 460
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 459 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 400
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 399 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 340
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 339 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctgcatgg 280
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 279 ttgatttcctcaaa 266
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 289 bits (146), Expect = 9e-076
Identities = 272/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 636 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 577
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 576 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 517
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 516 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 457
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 456 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 397
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 396 ccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctgcatgg 337
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 336 ttgatttcctcaaa 323
>gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 5', mRNA sequence
Length = 683
Score = 287 bits (145), Expect = 4e-075
Identities = 310/365 (84%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || || ||||| |||||| | |||||||||||||
Sbjct: 677 gtttctggtgatttaacatacatcactcaatcgtagatctttccatgttctatgttcatg 618
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||| ||||||| || |||||||| || || |||
Sbjct: 617 ccccagaaccctgggttataaatgccaactccaccagctgggcaattatcacagagaacc 558
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || || || |||||||| || ||||| ||| ||||||||
Sbjct: 557 tccatccttagagcaacagtattccgtctaaaacatgacgttcgatcagtcgccacaaat 498
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 497 atggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagggcct 438
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 ccagcttcaaagcctctgttactaacaagttcagcccatattccaccagcccctgcatgg 378
Query: 338 ttgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggc 397
||||| |||||||| || || || || ||||| |||||||||| |||||||| |||||
Sbjct: 377 ttgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggt 318
Query: 398 gaggc 402
|||||
Sbjct: 317 gaggc 313
>gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 5', mRNA sequence
Length = 871
Score = 281 bits (142), Expect = 2e-073
Identities = 271/314 (86%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| |||||||||||||||
Sbjct: 616 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttcatg 557
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 556 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 497
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 496 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 437
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 436 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 377
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 376 ccagcttcaaaacctctgttagtaacaagttcagcccatattccaccagctcctgcatgg 317
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 316 ttgatttcctcaaa 303
>gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 5', mRNA sequence
Length = 577
Score = 258 bits (130), Expect = 3e-066
Identities = 268/314 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | || |||| |||||| |||||||||||||||
Sbjct: 515 gtttctggtgatttaacatacatcactaaatagtaggtctttccatcttctatgttcatg 456
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| || |||||||| |||| ||||||||||||| || ||||| || || || |||
Sbjct: 455 ccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagagaacc 396
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 395 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 336
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcct 277
| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||
Sbjct: 335 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagggcct 276
Query: 278 ccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatgg 337
||||||||||| |||||||||||||| | |||||||||||| |||||||| | |||||||
Sbjct: 275 ccagcttcaaaacctctgttactaaccacttcagcccatattccaccagctcttgcatgg 216
Query: 338 ttgatctcctcaaa 351
||||| ||||||||
Sbjct: 215 ttgatttcctcaaa 202
>gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04G24 5', mRNA sequence
Length = 395
Score = 232 bits (117), Expect = 2e-058
Identities = 240/281 (85%)
Strand = Plus / Minus
Query: 122 ccaacaccaccagtaggacaattatcgcaaaggacctccatcctgagagcaacgatgttt 181
||||||||||||| || |||||||| || || ||||||||||| |||||||| | ||
Sbjct: 393 ccaacaccaccagctgggcaattatcacagagaacctccatccttagagcaacagtattc 334
Query: 182 cgactgaaacatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatg 241
||| | |||||||| || ||||| ||| ||||||||| || ||||| || ||||| |||
Sbjct: 333 cgattaaaacatgacgttcgatcagtcgccacaaatatggaagagtcatcaccaattatg 274
Query: 242 gaccatgggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttacta 301
|||||||| |||||||||||||| ||||| ||| |||||||||||| ||||||||||||
Sbjct: 273 gaccatggatcaatgtttgatggggtatgagggcgtccagcttcaaaacctctgttacta 214
Query: 302 acaagttcagcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccg 361
||||||||||||||||| ||||||||||||||||||||||| |||||||| || || ||
Sbjct: 213 acaagttcagcccatattccaccagcccctgcatggttgatttcctcaaaaaatattcca 154
Query: 362 aacagtgtatcagggatcttccgagcaagctgcggcgaggc 402
|| ||||| |||||||||| |||||||| ||||| |||||
Sbjct: 153 aatagtgtgtcagggatctgtcgagcaagttgcggtgaggc 113
>gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13C06 5', mRNA sequence
Length = 601
Score = 226 bits (114), Expect = 1e-056
Identities = 201/230 (87%)
Strand = Plus / Minus
Query: 122 ccaacaccaccagtaggacaattatcgcaaaggacctccatcctgagagcaacgatgttt 181
||||||||||||| || ||||| || || || ||||||||||| |||||||| | ||
Sbjct: 591 ccaacaccaccagctgggcaattgtcacagagaacctccatccttagagcaacagtattc 532
Query: 182 cgactgaaacatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatg 241
|||||||||||||| || ||||| ||| ||||||||| || ||||| |||||||| |||
Sbjct: 531 cgactgaaacatgacgttcgatcagtcgccacaaatatggaagagtcatctccaattatg 472
Query: 242 gaccatgggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttacta 301
|||||||| |||||||||||||| ||||| |||||||||||||||| ||||||||||||
Sbjct: 471 gaccatggatcaatgtttgatggggtatgagggcctccagcttcaaaacctctgttacta 412
Query: 302 acaagttcagcccatatgccaccagcccctgcatggttgatctcctcaaa 351
||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 411 acaagttcagcccatattccaccagctcctgcatggttgatttcctcaaa 362
>gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08G24 5', mRNA sequence
Length = 500
Score = 220 bits (111), Expect = 7e-055
Identities = 225/263 (85%)
Strand = Plus / Minus
Query: 140 caattatcgcaaaggacctccatcctgagagcaacgatgtttcgactgaaacatgatgta 199
||||||||||| || ||||||||||| |||||||| | || ||| | |||||||| ||
Sbjct: 497 caattatcgcagagaacctccatccttagagcaacagtattccgattaaaacatgacgtt 438
Query: 200 cgatcggtctccacaaatacagaggagtcgtctccaatgatggaccatgggtcaatgttt 259
||||| ||| ||||||||| || ||||| || ||||| ||||||||||| |||||||||
Sbjct: 437 cgatcagtcgccacaaatatggaagagtcatcaccaattatggaccatggatcaatgttt 378
Query: 260 gatggagtatggaggcctccagcttcaaaccctctgttactaacaagttcagcccatatg 319
||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 377 gatggggtatgagggcctccagcttcaaaacctctgttagtaacaagttcagcccatatt 318
Query: 320 ccaccagcccctgcatggttgatctcctcaaagaagatcccgaacagtgtatcagggatc 379
|||||||||| |||||||||||| |||||||| || || || || ||||| |||||||||
Sbjct: 317 ccaccagcccatgcatggttgatttcctcaaaaaatattccaaatagtgtgtcagggatc 258
Query: 380 ttccgagcaagctgcggcgaggc 402
| |||||||| ||||| |||||
Sbjct: 257 tgtcgagcaagttgcggtgaggc 235
>gb|CB639189.1|CB639189 OSJNEa08L04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08L04 5', mRNA sequence
Length = 280
Score = 212 bits (107), Expect = 2e-052
Identities = 188/215 (87%)
Strand = Plus / Minus
Query: 188 aaacatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatggaccat 247
|||||||| || ||||| ||| ||||||||| || ||||| || ||||| |||||||||
Sbjct: 258 aaacatgacgttcgatcagtcgccacaaatatggaagagtcatcaccaattatggaccat 199
Query: 248 gggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaacaagt 307
|| |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 198 ggatcaatgtttgatggggtatgagggcctccagcttcaaaacctctgttactaacaagt 139
Query: 308 tcagcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccgaacagt 367
||||||||||| ||||||||||||||||||||||| |||||||| || || || || |||
Sbjct: 138 tcagcccatattccaccagcccctgcatggttgatttcctcaaaaaatattccaaatagt 79
Query: 368 gtatcagggatcttccgagcaagctgcggcgaggc 402
|| |||||||||| |||||||| ||||| |||||
Sbjct: 78 gtgtcagggatctgtcgagcaagttgcggtgaggc 44
>gb|CB678077.1|CB678077 OSJNEe15K07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15K07 5', mRNA sequence
Length = 510
Score = 206 bits (104), Expect = 1e-050
Identities = 209/244 (85%)
Strand = Plus / Minus
Query: 159 ccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaata 218
||||||| |||||||| | || || || |||||||| || ||||| ||| |||||||||
Sbjct: 510 ccatccttagagcaacagtattccgtctaaaacatgacgttcgatcagtcgccacaaata 451
Query: 219 cagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctc 278
|| ||||| || ||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 450 tggaagagtcatcgccaattatggaccatggatcaatgtttgatggggtatgagggcctc 391
Query: 279 cagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatggt 338
|||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 390 cagcttcaaaacctgtgttactaacaagttcagcccatattccaccagcccctgcatggt 331
Query: 339 tgatctcctcaaagaagatcccgaacagtgtatcagggatcttccgagcaagctgcggcg 398
|||| |||||||| || || || || ||||| |||||||||| |||||||| ||||| |
Sbjct: 330 tgatttcctcaaaaaatattccaaatagtgtgtcagggatctgtcgagcaagttgcggtg 271
Query: 399 aggc 402
||||
Sbjct: 270 aggc 267
>gb|CB637776.1|CB637776 OSJNEa04P09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04P09 5', mRNA sequence
Length = 496
Score = 204 bits (103), Expect = 4e-050
Identities = 187/215 (86%)
Strand = Plus / Minus
Query: 188 aaacatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatggaccat 247
|||||||| || ||||| ||| ||||||||| || ||||| || ||||| |||||||||
Sbjct: 447 aaacatgacgttcgatcagtcgccacaaatatggaagagtcatcaccaattatggaccat 388
Query: 248 gggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaacaagt 307
|| |||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 387 ggatcaatgtttgatggggtatgagggcctccagcttcaaaacctctgttactaacaagt 328
Query: 308 tcagcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccgaacagt 367
||||||||||| |||||||||| |||||||||||| |||||||| || || || || |||
Sbjct: 327 tcagcccatattccaccagcccatgcatggttgatttcctcaaaaaatattccaaatagt 268
Query: 368 gtatcagggatcttccgagcaagctgcggcgaggc 402
|| |||||||||| |||||||| ||||| |||||
Sbjct: 267 gtgtcagggatctgtcgagcaagttgcggtgaggc 233
>gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03A01 5', mRNA sequence
Length = 530
Score = 200 bits (101), Expect = 7e-049
Identities = 152/169 (89%)
Strand = Plus / Minus
Query: 183 gactgaaacatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatgg 242
||||||||||||| || ||||| ||| ||||||||| || ||||| |||||||| ||||
Sbjct: 530 gactgaaacatgacgttcgatcagtcgccacaaatatggaagagtcatctccaattatgg 471
Query: 243 accatgggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaa 302
||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||||
Sbjct: 470 accatggatcaatgtttgatggggtatgagggcctccagcttcaaaacctctgttactaa 411
Query: 303 caagttcagcccatatgccaccagcccctgcatggttgatctcctcaaa 351
|||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 410 caagttcagcccatattccaccagctcctgcatggttgatttcctcaaa 362
>gb|CB637913.1|CB637913 OSJNEa05G23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa05G23 5', mRNA sequence
Length = 410
Score = 176 bits (89), Expect = 1e-041
Identities = 173/201 (86%)
Strand = Plus / Minus
Query: 190 acatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatggaccatgg 249
|||||| || ||||| ||| ||||||||| || ||||| || ||||| |||||||||||
Sbjct: 388 acatgacgttcgatcagtcgccacaaatatggaagagtcatcaccaattatggaccatgg 329
Query: 250 gtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaacaagttc 309
|||||||||||||| ||||| ||||||||||||| || ||||||||| ||||||||||
Sbjct: 328 atcaatgtttgatggggtatgagggcctccagcttctaaacctctgttagtaacaagttc 269
Query: 310 agcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccgaacagtgt 369
||||||||| |||||||||| |||||||||||| |||||||| || || || || |||||
Sbjct: 268 agcccatattccaccagcccatgcatggttgatttcctcaaaaaatattccaaatagtgt 209
Query: 370 atcagggatcttccgagcaag 390
|||||||||| ||||||||
Sbjct: 208 gtcagggatctgtcgagcaag 188
>gb|CB639303.1|CB639303 OSJNEa09H24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa09H24 5', mRNA sequence
Length = 432
Score = 165 bits (83), Expect = 4e-038
Identities = 164/191 (85%)
Strand = Plus / Minus
Query: 190 acatgatgtacgatcggtctccacaaatacagaggagtcgtctccaatgatggaccatgg 249
|||||| || ||||| ||| ||||||||| || ||||| || ||||| |||||||||||
Sbjct: 432 acatgacgttcgatcagtcgccacaaatatggaagagtcatcaccaattatggaccatgg 373
Query: 250 gtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaacaagttc 309
|||||||||||||| ||||| ||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 372 atcaatgtttgatggggtatgagggcgtccagcttcaaaacctttgttagtaacaagttc 313
Query: 310 agcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccgaacagtgt 369
||||||||| |||||||||| |||||||||||| |||||||| || || || || |||||
Sbjct: 312 agcccatattccaccagcccatgcatggttgatttcctcaaaaaatattccaaatagtgt 253
Query: 370 atcagggatct 380
||||||||||
Sbjct: 252 gtcagggatct 242
>dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096C04, full
insert sequence
Length = 2409
Score = 159 bits (80), Expect = 2e-036
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 77 tttccttcttctatgttcatgccccaaaaccctgggttgtaaacaccaacaccaccagta 136
|||||||||||||| ||||||||||| || ||||||||||||| || ||||| || |
Sbjct: 658 tttccttcttctatattcatgccccagaatcctgggttgtaaatgccgacaccgccggct 599
Query: 137 ggacaattatcgcaaaggacctccatcctgagagcaacgatgtttcgactgaaacatgat 196
||||||||||| || || | ||||||||| |||||||| || ||| | | |||||| |||
Sbjct: 598 ggacaattatcacagagaatctccatccttagagcaacaatattttggcggaaacaagat 539
Query: 197 gtacgatcggtctccacaaatacagaggagtcgtctccaatgatggaccatgggtcaatg 256
| | ||| ||| || ||| |||||| || ||||||||||| ||||||||||||||
Sbjct: 538 gagcaatcagtcgtgacgtatatagaggattcatctccaatgatagaccatgggtcaata 479
Query: 257 tttgatggagtatggaggcctccagcttcaaaccctctgttactaacaagttcagcccat 316
||||| || || ||| | |||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 478 tttgaaggggtgtggggccctccagcttcaaaccctctgttactgacaagctccgcccat 419
Query: 317 atgccaccagcccctgcatggttgatctcctc 348
|| |||||||| || |||||||| || |||||
Sbjct: 418 atcccaccagctccggcatggttaatttcctc 387
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 68421 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 68480
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 68481 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 68540
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 68541 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 68600
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 68601 gcctccagcttcaaa 68615
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 69394 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 69451
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 60540 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 60585
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 30623 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 30682
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 30683 aatctccatccttagagc 30700
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 68116 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 68172
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 60416 catgccccaaaatcctggattgtaaattccaacaccacc 60454
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 30749 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 30808
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 30809 agattcaaa 30817
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 75406 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 75347
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 75346 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 75287
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 75286 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 75227
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 75226 gcctccagcttcaaa 75212
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 74847 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 74790
Score = 85.7 bits (43), Expect = 3e-014
Identities = 160/199 (80%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| || ||||| || | ||||||||||| || ||
Sbjct: 106328 catgccccagaatcctgggttgtaaatgccgacaccgccggctggacaattatcacagag 106269
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
| ||||||||| |||||||| || ||| | | |||||| |||| | ||| ||| ||
Sbjct: 106268 aatctccatccttagagcaacaatattttggcggaaacaagatgagcaatcagtcgtgac 106209
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||| |||||| || ||||||||||| |||||||||||||| ||||| || || ||| |
Sbjct: 106208 gtatatagaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtgggg 106149
Query: 274 gcctccagcttcaaaccct 292
||||||||||||||||||
Sbjct: 106148 ccctccagcttcaaaccct 106130
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 82898 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 82853
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 75700 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 75644
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 105482 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 105433
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 454893 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 454834
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 454833 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 454774
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 454773 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 454714
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 454713 gcctccagcttcaaa 454699
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 454334 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 454277
Score = 85.7 bits (43), Expect = 3e-014
Identities = 160/199 (80%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| || ||||| || | ||||||||||| || ||
Sbjct: 485815 catgccccagaatcctgggttgtaaatgccgacaccgccggctggacaattatcacagag 485756
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
| ||||||||| |||||||| || ||| | | |||||| |||| | ||| ||| ||
Sbjct: 485755 aatctccatccttagagcaacaatattttggcggaaacaagatgagcaatcagtcgtgac 485696
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||| |||||| || ||||||||||| |||||||||||||| ||||| || || ||| |
Sbjct: 485695 gtatatagaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtgggg 485636
Query: 274 gcctccagcttcaaaccct 292
||||||||||||||||||
Sbjct: 485635 ccctccagcttcaaaccct 485617
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 462385 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 462340
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 455187 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 455131
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 484969 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 484920
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 1360749 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 1360690
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 1360689 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 1360630
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1360629 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 1360570
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1360569 gcctccagcttcaaa 1360555
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1359776 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 1359719
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1368630 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1368585
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 1398547 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 1398488
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 1398487 aatctccatccttagagc 1398470
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 1361054 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 1360998
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 1368754 catgccccaaaatcctggattgtaaattccaacaccacc 1368716
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 1398421 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 1398362
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 1398361 agattcaaa 1398353
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 25873 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 25932
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 25933 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 25992
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 25993 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 26052
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 26053 gcctccagcttcaaa 26067
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 26432 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 26489
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 18380 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 18425
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 25578 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 25634
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 19461 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 19520
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 19521 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 19580
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 19581 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 19640
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 19641 gcctccagcttcaaa 19655
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 20434 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 20491
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 11579 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 11624
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 19156 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 19212
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 11455 catgccccaaaatcctggattgtaaattccaacaccacc 11493
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 1285866 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 1285807
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 1285806 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 1285747
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1285746 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 1285687
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1285686 gcctccagcttcaaa 1285672
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1284893 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 1284836
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1293748 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1293703
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 1326703 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 1326644
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 1326643 aatctccatccttagagc 1326626
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 1286171 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 1286115
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 1293872 catgccccaaaatcctggattgtaaattccaacaccacc 1293834
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 1326577 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 1326518
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 1326517 agattcaaa 1326509
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 1149757 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 1149698
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 1149697 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 1149638
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1149637 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 1149578
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1149577 gcctccagcttcaaa 1149563
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1149198 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 1149141
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1157250 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1157205
Score = 73.8 bits (37), Expect = 1e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||||||||| ||||| || || ||| | |||||
Sbjct: 1181482 agaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtggggccctcc 1181423
Query: 280 agcttcaaaccct 292
|||||||||||||
Sbjct: 1181422 agcttcaaaccct 1181410
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 1150052 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 1149996
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 1180762 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 1180713
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 1285866 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 1285807
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 1285806 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 1285747
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1285746 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 1285687
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1285686 gcctccagcttcaaa 1285672
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1284893 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 1284836
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1293748 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1293703
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 1326703 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 1326644
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 1326643 aatctccatccttagagc 1326626
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 1286171 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 1286115
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 1293872 catgccccaaaatcctggattgtaaattccaacaccacc 1293834
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 1326577 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 1326518
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 1326517 agattcaaa 1326509
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 1452049 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 1451990
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 1451989 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 1451930
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1451929 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 1451870
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1451869 gcctccagcttcaaa 1451855
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1451490 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 1451433
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1459542 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1459497
Score = 73.8 bits (37), Expect = 1e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||||||||| ||||| || || ||| | |||||
Sbjct: 1483774 agaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtggggccctcc 1483715
Query: 280 agcttcaaaccct 292
|||||||||||||
Sbjct: 1483714 agcttcaaaccct 1483702
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 1452344 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 1452288
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 1483054 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 1483005
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 1456611 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 1456552
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 1456551 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 1456492
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1456491 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 1456432
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1456431 gcctccagcttcaaa 1456417
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1456052 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 1455995
Score = 85.7 bits (43), Expect = 3e-014
Identities = 160/199 (80%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| || ||||| || | ||||||||||| || ||
Sbjct: 1487533 catgccccagaatcctgggttgtaaatgccgacaccgccggctggacaattatcacagag 1487474
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
| ||||||||| |||||||| || ||| | | |||||| |||| | ||| ||| ||
Sbjct: 1487473 aatctccatccttagagcaacaatattttggcggaaacaagatgagcaatcagtcgtgac 1487414
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||| |||||| || ||||||||||| |||||||||||||| ||||| || || ||| |
Sbjct: 1487413 gtatatagaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtgggg 1487354
Query: 274 gcctccagcttcaaaccct 292
||||||||||||||||||
Sbjct: 1487353 ccctccagcttcaaaccct 1487335
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1464103 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1464058
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 1456905 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 1456849
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 1486687 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 1486638
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 1360748 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 1360689
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 1360688 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 1360629
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1360628 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 1360569
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1360568 gcctccagcttcaaa 1360554
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1359775 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 1359718
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1368629 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1368584
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 1398546 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 1398487
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 1398486 aatctccatccttagagc 1398469
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 1361053 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 1360997
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 1368753 catgccccaaaatcctggattgtaaattccaacaccacc 1368715
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 1398420 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 1398361
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 1398360 agattcaaa 1398352
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| ||||||||||| |||| ||||||||||||| || |||||||| || ||
Sbjct: 1454332 catgccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagag 1454273
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||
Sbjct: 1454272 aacctccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccac 1454213
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1454212 aaatatggaagagtcatcaccaattatggaccatggatcaatgtttgatggggtatgagg 1454153
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1454152 gcctccagcttcaaa 1454138
Score = 99.6 bits (50), Expect = 2e-018
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 1453773 cctctgttactaacaagttcagcccatattccaccagcccctgcatggttgatttcct 1453716
Score = 85.7 bits (43), Expect = 3e-014
Identities = 160/199 (80%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| || ||||| || | ||||||||||| || ||
Sbjct: 1485254 catgccccagaatcctgggttgtaaatgccgacaccgccggctggacaattatcacagag 1485195
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
| ||||||||| |||||||| || ||| | | |||||| |||| | ||| ||| ||
Sbjct: 1485194 aatctccatccttagagcaacaatattttggcggaaacaagatgagcaatcagtcgtgac 1485135
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||| |||||| || ||||||||||| |||||||||||||| ||||| || || ||| |
Sbjct: 1485134 gtatatagaggattcatctccaatgatagaccatgggtcaatatttgaaggggtgtgggg 1485075
Query: 274 gcctccagcttcaaaccct 292
||||||||||||||||||
Sbjct: 1485074 ccctccagcttcaaaccct 1485056
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1461824 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1461779
Score = 58.0 bits (29), Expect = 6e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | |||||||| |||||| ||||||||||||
Sbjct: 1454626 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttc 1454570
Score = 52.0 bits (26), Expect = 4e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggtt 339
||||||||||| ||||| || |||||||| |||||||| || ||||||||
Sbjct: 1484408 cctctgttactgacaagctccgcccatatcccaccagctccggcatggtt 1484359
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 149 bits (75), Expect = 2e-033
Identities = 165/195 (84%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| ||||||||||||| || ||||| || || ||
Sbjct: 1360748 catgccccagaatcctgggttataaatgccaacaccaccagctgggcaattgtcacagag 1360689
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||
Sbjct: 1360688 aacctccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccac 1360629
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 1360628 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 1360569
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 1360568 gcctccagcttcaaa 1360554
Score = 91.7 bits (46), Expect = 4e-016
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 290 cctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcct 347
||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1359775 cctctgttactaacaagttcagcccatattccaccagctcctgcatggttgatttcct 1359718
Score = 75.8 bits (38), Expect = 3e-011
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatg 263
|||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 1368629 acagaggattcatctccaatgatggaccatgggtcaatgtttgatg 1368584
Score = 52.0 bits (26), Expect = 4e-004
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || ||||||||||||| |||||||| |||| |||||||| || || ||
Sbjct: 1398546 catgccccagaatcctgggttgtaaatgccaacaccgccagctggacaattctcacagag 1398487
Query: 154 gacctccatcctgagagc 171
| ||||||||| |||||
Sbjct: 1398486 aatctccatccttagagc 1398469
Score = 50.1 bits (25), Expect = 0.001
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttc 94
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||||
Sbjct: 1361053 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttc 1360997
Score = 46.1 bits (23), Expect = 0.023
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccacc 132
|||||||||||| ||||| ||||||| |||||||||||
Sbjct: 1368753 catgccccaaaatcctggattgtaaattccaacaccacc 1368715
Score = 42.1 bits (21), Expect = 0.36
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 220 agaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctcc 279
|||||| || ||||||||||| |||||||| || ||||| || || || ||| | |||||
Sbjct: 1398420 agaggattcatctccaatgatagaccatggatcgatgttagaaggggtgtggggccctcc 1398361
Query: 280 agcttcaaa 288
|| ||||||
Sbjct: 1398360 agattcaaa 1398352
>gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 5', mRNA sequence
Length = 848
Score = 145 bits (73), Expect = 3e-032
Identities = 154/181 (85%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 203 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 144
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| ||||||||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 143 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 84
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || ||||| |||||||| || ||||| ||| ||||||||
Sbjct: 83 tccatccttagagcaacagtattccgactaaaacatgacgttcgatcagtcgccacaaat 24
Query: 218 a 218
|
Sbjct: 23 a 23
>dbj|AG214514.1| Oryza sativa (japonica cultivar-group) DNA, clone:T14887T, 3'
flanking sequence of Tos17 insertion in rice strain
NC2786, genomic survey sequence
Length = 664
Score = 139 bits (70), Expect = 2e-030
Identities = 163/195 (83%)
Strand = Plus / Minus
Query: 94 catgccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaag 153
||||||||| || |||||||| |||| |||||||| |||| || ||||| || || ||
Sbjct: 618 catgccccagaatcctgggttataaatgccaacaccnccagctgggcaattgtcacanag 559
Query: 154 gacctccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccac 213
||||||||||| |||||||| | || ||| |||||||||| || ||||| ||| ||||
Sbjct: 558 aacctccatccttagagcaacagtattccgantgaaacatgacgttcgatcagtcgccac 499
Query: 214 aaatacagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggag 273
||||| || ||||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 498 aaatatggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatgagg 439
Query: 274 gcctccagcttcaaa 288
|||||||||||||||
Sbjct: 438 gcctccagcttcaaa 424
>gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa05A13 5', mRNA sequence
Length = 574
Score = 133 bits (67), Expect = 1e-028
Identities = 181/219 (82%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| | |||||||||||||
Sbjct: 219 gtttctggtgatttaacatacatcactaaattgtagatctttccatgttctatgttcatg 160
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||||| |||| |||||| |||| ||||||||||||| || |||||||| || || |||
Sbjct: 159 ccccagaaccatgggttataaatgccaacaccaccagctgggcaattatcacagagaacc 100
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||| | |||||||| | || |||| |||||||| || ||||| ||| ||||||||
Sbjct: 99 tccatcgttagagcaacagtattcagactaaaacatgacgttcgatcagtcgccacaaat 40
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatg 256
| || ||||| || ||||| ||||||||||| ||||||
Sbjct: 39 atggaagagtcatcaccaattatggaccatggatcaatg 1
>ref|XM_471515.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1965
Score = 133 bits (67), Expect = 1e-028
Identities = 145/171 (84%)
Strand = Plus / Minus
Query: 232 tccaatgatggaccatgggtcaatgtttgatggagtatggaggcctccagcttcaaaccc 291
|||||| |||||||| ||||||||| | |||||||||| ||||||||||||| || ||
Sbjct: 291 tccaattatggaccaagggtcaatgctcgatggagtattagggcctccagcttcgaaacc 232
Query: 292 tctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatctcctcaaa 351
|||||| || ||||| || |||||||| ||||| || || ||||||||||||||||| ||
Sbjct: 231 tctgttgctgacaagctctgcccatattccacctgctccagcatggttgatctcctcgaa 172
Query: 352 gaagatcccgaacagtgtatcagggatcttccgagcaagctgcggcgaggc 402
|| ||||| || ||||| ||||||||||| |||||| ||||||| |||||
Sbjct: 171 aaatatcccaaagagtgtctcagggatctttcgagcatgctgcggtgaggc 121
Score = 109 bits (55), Expect = 2e-021
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 7 agagcttgttagtgaaactgtcaagtcagttgtttctggtgacttaacaaacataacaag 66
||||||||||||||||||||| || || || ||||| ||| ||| || |||| |||||
Sbjct: 516 agagcttgttagtgaaactgttaactctgtattttctaatgatttagcatacatgacaag 457
Query: 67 attgtagacctttccttcttctatgttcatgccccaaaaccctgggttgtaaacaccaac 126
| ||||| |||||| || ||||||||||||||||| || ||||| ||||||| |||||
Sbjct: 456 actgtagttctttccatcctctatgttcatgccccagaatcctggattgtaaatgccaac 397
Query: 127 accaccagtaggacaattatcgcaaaggacctccatcctgagagcaacgatgtttcgact 186
|||||||| | || | | | || || ||||||||||| ||||||| ||| ||||||||
Sbjct: 396 accaccagcttggcagtcaccacagagaacctccatcctcagagcaatgatatttcgact 337
Query: 187 gaaacatgatg 197
|||||||||||
Sbjct: 336 gaaacatgatg 326
>gb|CB637692.1|CB637692 OSJNEa04L18.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04L18 5', mRNA sequence
Length = 606
Score = 125 bits (63), Expect = 3e-026
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 273 ggcctccagcttcaaaccctctgttactaacaagttcagcccatatgccaccagcccctg 332
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 604 ggcctccagcttcaaaacctctgttactaacaagttcagcccatattccaccagctcctg 545
Query: 333 catggttgatctcctcaaa 351
|||||||||| ||||||||
Sbjct: 544 catggttgatttcctcaaa 526
>gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-B11, mRNA sequence
Length = 680
Score = 125 bits (63), Expect = 3e-026
Identities = 190/233 (81%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | ||||||| |||||| ||||||||||| |
Sbjct: 243 gtttctggtgatttaacatacatcactaaattgtaggtctttccatcttctatgttaaaa 184
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatcgcaaaggacc 157
||| || |||||||| |||| ||||||||||||| |||| | || || || |||
Sbjct: 183 aaccagaatcctgggttataaatgccaacaccaccagatggacnnatgtcacagagaacc 124
Query: 158 tccatcctgagagcaacgatgtttcgactgaaacatgatgtacgatcggtctccacaaat 217
|||||||| |||||||| | || |||||||||||||| || ||||| ||| ||||||||
Sbjct: 123 tccatccttagagcaacagtattccgactgaaacatgacgttcgatcagtcgccacaaat 64
Query: 218 acagaggagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatg 270
| || ||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 63 atggaagagtcatctccaattatggaccatggatcaatgtttgatggggtatg 11
>gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E11 5', mRNA sequence
Length = 799
Score = 107 bits (54), Expect = 7e-021
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 38 gtttctggtgacttaacaaacataacaagattgtagacctttccttcttctatgttcatg 97
||||||||||| |||||| |||| || | |||||||| |||||| |||||||||||||||
Sbjct: 133 gtttctggtgatttaacatacatcactaaattgtagatctttccatcttctatgttcatg 74
Query: 98 ccccaaaaccctgggttgtaaacaccaacaccaccagtaggacaattatc 147
||||| ||||||||||| |||| ||||||||||||| || ||||||||
Sbjct: 73 ccccagaaccctgggttataaatgccaacaccaccagctgggcaattatc 24
>gb|CB676812.1|CB676812 OSJNEe13E16.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13E16 5', mRNA sequence
Length = 672
Score = 107 bits (54), Expect = 7e-021
Identities = 135/162 (83%)
Strand = Plus / Minus
Query: 224 gagtcgtctccaatgatggaccatgggtcaatgtttgatggagtatggaggcctccagct 283
||||| |||||||| || ||||||||||||| ||||| ||||||| | ||| ||||||
Sbjct: 354 gagtcatctccaattatcaaccatgggtcaatatttgaaggagtattaatgccaccagct 295
Query: 284 tcaaaccctctgttactaacaagttcagcccatatgccaccagcccctgcatggttgatc 343
|| || |||||||| || ||||| || ||||| | ||||||||||| |||||||||| |
Sbjct: 294 tcgaaacctctgttgcttacaagctctgcccacagtccaccagccccggcatggttgagc 235
Query: 344 tcctcaaagaagatcccgaacagtgtatcagggatcttccga 385
|||||||| ||||| ||||||| | | ||||||||| |||||
Sbjct: 234 tcctcaaaaaagatgccgaacattttgtcagggatcgtccga 193
>dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F23, full
insert sequence
Length = 2574
Score = 101 bits (51), Expect = 5e-019
Identities = 132/159 (83%)
Strand = Plus / Minus
Query: 244 ccatgggtcaatgtttgatggagtatggaggcctccagcttcaaaccctctgttactaac 303
|||||||||||||||||| || |||| | || ||||| ||||| ||||||||||| ||
Sbjct: 306 ccatgggtcaatgtttgaaggtgtattaggtccaccagcctcaaaacctctgttacttac 247
Query: 304 aagttcagcccatatgccaccagcccctgcatggttgatctcctcaaagaagatcccgaa 363
||| || ||||| | ||||||||||| ||||||||||||||||| || || || |||||
Sbjct: 246 aagctctgcccacaacccaccagccccagcatggttgatctcctcgaaaaatataccgaa 187
Query: 364 cagtgtatcagggatcttccgagcaagctgcggcgaggc 402
|| ||||||||||||||| ||| ||||||||||||
Sbjct: 186 catcttatcagggatcttccttgcattctgcggcgaggc 148
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,021,388
Number of Sequences: 438736
Number of extensions: 1021388
Number of successful extensions: 12776
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12107
Number of HSP's gapped (non-prelim): 665
length of query: 645
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 624
effective length of database: 2,791,206,460
effective search space: 1741712831040
effective search space used: 1741712831040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)