BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3191506.2.1
(1208 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK068531.1| Oryza sativa (japonica cultivar-group) cDNA... 1029 0.0
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 454 e-125
gb|AACV01014905.1| Oryza sativa (japonica cultivar-group) c... 454 e-125
dbj|AP004329.3| Oryza sativa (japonica cultivar-group) geno... 454 e-125
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 454 e-125
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 454 e-125
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 454 e-125
gb|D23247.1|D23247 RICC2485A Rice callus Oryza sativa (japo... 434 e-119
dbj|AK073015.1| Oryza sativa (japonica cultivar-group) cDNA... 398 e-108
dbj|AK119405.1| Oryza sativa (japonica cultivar-group) cDNA... 379 e-102
gb|CF303948.1|CF303948 ABF1--03-K15.g1 ABF3-overexpressing ... 313 1e-082
gb|CF322517.1|CF322517 HDN--01-E16.g1 OsHDAC1-overexpressin... 274 1e-070
gb|AACV01020445.1| Oryza sativa (japonica cultivar-group) c... 216 2e-053
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
dbj|AP005567.3| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 216 2e-053
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 216 2e-053
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 216 2e-053
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
gb|CF305826.1|CF305826 HDA1--01-N15.g1 OsHDAC1-overexpressi... 155 7e-035
gb|C26644.1|C26644 C26644 Rice callus cDNA Oryza sativa (ja... 90 3e-015
gb|CB678467.1|CB678467 OSJNEe16I08.f OSJNEe Oryza sativa (j... 82 8e-013
dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chro... 50 0.003
dbj|AP005148.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01018784.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|XM_483148.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
>dbj|AK068531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D09, full
insert sequence
Length = 2206
Score = 1029 bits (519), Expect = 0.0
Identities = 882/1003 (87%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 456 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 515
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 516 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 575
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 576 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 635
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 636 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 695
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagagtgcttcggat 365
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 696 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagagtgcttctgag 755
Query: 366 agaaccaaagcaatgggccaagttttatcaaaagcaagggatctattgtacgattgcaag 425
||| ||||| ||||||||| | || |||||||||| |||| ||| || |||||||||
Sbjct: 756 agagtcaaagtaatgggccagttactagcaaaagcaagagatcaattatatgattgcaag 815
Query: 426 gaaattacccagcgtttgagagcaatgcttcagtcagcagatgagcaggtccggagcttg 485
| |||||| ||||| || ||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 816 gcaattactcagcggttaagagcgatgcttcagtcagctgatgagcaggtcaggagctta 875
Query: 486 aagaagcagagcaccttccttagccagctagcagctaagacaatcccaaatggcatccat 545
|||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||||
Sbjct: 876 aagaagcagagcaccttcctaagccagttagtggcgaagacaatcccaaatggcatccat 935
Query: 546 tgtctttccatgcgcttaacgattgattattatcttctctctccagagaaaagaaagttc 605
|| || |||||||| ||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 936 tgcctgtccatgcggctaacgatagactattaccttctctccccagagaaaagaaagttt 995
Query: 606 ccaaatagtgagaacctggaaaatcctgatctttaccattatgctcttttctcggacaat 665
|| || ||||||||| | ||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 996 ccgaagagtgagaacttagaaaatcctgatctttatcactatgcccttttttcggacaat 1055
Query: 666 gttttggcagcatcagttgtggtcaactcaaccatcatgaatgctaaggagcctgaaaaa 725
||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct: 1056 gttttggcagcttcagttgtggtgaactcaaccatcatgaatgcaaaggagcctgagaaa 1115
Query: 726 catgtatttcatcttgttactgacaaactgaactttggggccatgaacatgtggtttttg 785
|||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 1116 catgtattccatcttgttactgacaagctgaactttggagcaatgaacatgtggtttttg 1175
Query: 786 ctgaatccacctggggatgcaacaatccatgtggaaaatgttgatgacttcaaatggtta 845
||||||||||||| ||||| ||||||||||| ||||| || ||||||||||||||| |
Sbjct: 1176 ttgaatccacctggagatgcgacaatccatgttgaaaacgtggatgacttcaaatggctg 1235
Query: 846 aactcttcttactgccctgttctgaagcagcttgagtctgcagccatgaaagaatattat 905
|||||||| || ||||||||||||||||||||||| |||| ||||||||||| || |||
Sbjct: 1236 aactcttcatattgccctgttctgaagcagcttgaatctgtggccatgaaagagtactat 1295
Query: 906 ttcaaggctgatcgtccgaaaacactctctgctggttcttctaatctgaagtatcgaaac 965
|| ||||| || ||||| ||||| |||||||||||||||||||||||||| ||| | |||
Sbjct: 1296 tttaaggcagaccgtccaaaaactctctctgctggttcttctaatctgaaatataggaac 1355
Query: 966 ccaaaatatttgtccatgctcaatcatctaagattttacctcccacaagtctatcccaag 1025
|| |||||| | ||||||||||| ||| ||||||| ||||| || ||||| ||||| |||
Sbjct: 1356 cccaaatatctttccatgctcaaccatttaagattctaccttcctcaagtgtatcctaag 1415
Query: 1026 ctgaataaaattcttttcctggatgatgatatagttgtccaga 1068
||||||| || ||||||||||||||||| |||||||| ||||
Sbjct: 1416 ttgaataagatccttttcctggatgatgacatagttgttcaga 1458
>ref|NT_107234.1| Oryza sativa (japonica cultivar-group)
Length = 1126496
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 773826 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 773885
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 773886 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 773945
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 773946 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 774005
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 774006 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 774065
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 774066 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 774125
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 774126 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 774185
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 774186 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 774245
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 774246 gtggggagagttttcaccgttttga 774270
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 773411 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 773470
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 773471 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 773530
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 773531 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 773590
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 773591 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 773650
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 773651 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 773710
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 773711 caaccatcatgaatgcaaagg 773731
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 773005 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 773064
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 773065 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 773124
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 773125 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 773184
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 773185 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 773244
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 773245 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 773294
>gb|AACV01014905.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014905, whole
genome shotgun sequence
Length = 25723
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 12933 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 12992
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 12993 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 13052
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 13053 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 13112
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 13113 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 13172
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 13173 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 13232
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 13233 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 13292
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 13293 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 13352
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 13353 gtggggagagttttcaccgttttga 13377
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 12518 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 12577
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 12578 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 12637
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 12638 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 12697
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 12698 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 12757
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 12758 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 12817
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 12818 caaccatcatgaatgcaaagg 12838
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 12112 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 12171
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 12172 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 12231
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 12232 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 12291
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 12292 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 12351
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12352 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 12401
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OJ1663_H12
Length = 125422
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 67367 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 67426
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 67427 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 67486
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 67487 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 67546
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 67547 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 67606
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 67607 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 67666
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 67667 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 67726
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 67727 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 67786
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 67787 gtggggagagttttcaccgttttga 67811
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 66952 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 67011
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 67012 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 67071
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 67072 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 67131
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 67132 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 67191
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 67192 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 67251
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 67252 caaccatcatgaatgcaaagg 67272
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 66546 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 66605
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 66606 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 66665
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 66666 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 66725
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 66726 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 66785
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 66786 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 66835
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 11055043 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 11055102
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 11055103 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 11055162
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 11055163 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 11055222
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 11055223 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 11055282
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 11055283 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 11055342
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 11055343 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 11055402
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 11055403 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 11055462
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 11055463 gtggggagagttttcaccgttttga 11055487
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 11054628 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 11054687
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 11054688 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 11054747
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 11054748 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 11054807
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 11054808 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 11054867
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 11054868 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 11054927
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 11054928 caaccatcatgaatgcaaagg 11054948
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 11054222 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 11054281
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 11054282 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 11054341
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 11054342 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 11054401
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 11054402 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 11054461
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 11054462 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 11054511
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 28753780 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 28753839
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 28753840 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 28753899
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 28753900 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 28753959
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 28753960 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 28754019
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 28754020 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 28754079
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 28754080 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 28754139
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 28754140 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 28754199
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 28754200 gtggggagagttttcaccgttttga 28754224
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 28753365 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 28753424
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 28753425 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 28753484
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 28753485 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 28753544
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 28753545 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 28753604
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 28753605 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 28753664
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 28753665 caaccatcatgaatgcaaagg 28753685
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 28752959 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 28753018
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 28753019 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 28753078
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28753079 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 28753138
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 28753139 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 28753198
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 28753199 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 28753248
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 454 bits (229), Expect = e-125
Identities = 391/445 (87%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||
Sbjct: 29623782 aggagcctgagaaacatgtattccatcttgttactgacaagctgaactttggagcaatga 29623841
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
|||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct: 29623842 acatgtggtttttgttgaatccacctggagatgcgacaatccatgttgaaaacgtggatg 29623901
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
||||||||||| | |||||||| || ||||||||||||||||||||||| |||| ||||
Sbjct: 29623902 acttcaaatggctgaactcttcatattgccctgttctgaagcagcttgaatctgtggcca 29623961
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| || ||||| ||||| || ||||| ||||| ||||||||||||||||||||||
Sbjct: 29623962 tgaaagagtactattttaaggcagaccgtccaaaaactctctctgctggttcttctaatc 29624021
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
|||| ||| | ||||| |||||| | ||||||||||| ||| ||||||| ||||| || |
Sbjct: 29624022 tgaaatataggaaccccaaatatctttccatgctcaaccatttaagattctaccttcctc 29624081
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
|||| ||||| ||| ||||||| || ||||||||||||||||| |||||||| |||| ||
Sbjct: 29624082 aagtgtatcctaagttgaataagatccttttcctggatgatgacatagttgttcagaagg 29624141
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || |||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 29624142 atttgacaggactctgggaggttgatctaaatgggaatgtaaatggtgctgtggaaacat 29624201
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| |||||||||||||| |||||
Sbjct: 29624202 gtggggagagttttcaccgttttga 29624226
Score = 351 bits (177), Expect = 6e-094
Identities = 285/321 (88%)
Strand = Plus / Plus
Query: 394 caaaagcaagggatctattgtacgattgcaaggaaattacccagcgtttgagagcaatgc 453
|||||||||| |||| ||| || |||||||||| |||||| ||||| || ||||| ||||
Sbjct: 29623367 caaaagcaagagatcaattatatgattgcaaggcaattactcagcggttaagagcgatgc 29623426
Query: 454 ttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagccagc 513
|||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 29623427 ttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagccagt 29623486
Query: 514 tagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgattgatt 573
|||| || |||||||||||||||||||||||||| || |||||||| ||||||| || |
Sbjct: 29623487 tagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgatagact 29623546
Query: 574 attatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaatcctg 633
|||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||||||
Sbjct: 29623547 attaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaatcctg 29623606
Query: 634 atctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtcaact 693
||||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 29623607 atctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtgaact 29623666
Query: 694 caaccatcatgaatgctaagg 714
|||||||||||||||| ||||
Sbjct: 29623667 caaccatcatgaatgcaaagg 29623687
Score = 329 bits (166), Expect = 2e-087
Identities = 259/290 (89%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 29622961 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 29623020
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 29623021 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 29623080
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 29623081 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 29623140
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| ||||||| || ||| | ||||| ||||||
Sbjct: 29623141 cttgccaaatccagggacaagctcgatcttcatcaggatctactttccaggcttaaggaa 29623200
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttcccaagag 355
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 29623201 agccagcgctcccttggggaagctactgctgatgctgaacttcccaagag 29623250
>gb|D23247.1|D23247 RICC2485A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2485_1A, mRNA sequence
Length = 353
Score = 434 bits (219), Expect = e-119
Identities = 317/350 (90%)
Strand = Plus / Plus
Query: 450 atgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttccttagc 509
|||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||
Sbjct: 4 atgcttcagtcagctgatgagcaggtcaggagcttaaagaagcagagcaccttcctaagc 63
Query: 510 cagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgcttaacgatt 569
||| |||| || |||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 64 cagttagcggcgaagacaatcccaaatggcatccattgcctgtccatgcggctaacgata 123
Query: 570 gattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctggaaaat 629
|| ||||| |||||||| ||||||||||||||||| || || ||||||||| | ||||||
Sbjct: 124 gactattaccttctctccccagagaaaagaaagtttccgaagagtgagaacttagaaaat 183
Query: 630 cctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagttgtggtc 689
||||||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 184 cctgatctttatcactatgcccttttttcggacaatgttttggcagcttcagttgtggtg 243
Query: 690 aactcaaccatcatgaatgctaaggagcctgaaaaacatgtatttcatcttgttactgac 749
|||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 244 aactcaaccatcatgaatgcaaaggagcctgagaaacatgtattccatcttgttactgac 303
Query: 750 aaactgaactttggggccatgaacatgtggtttttgctgaatccacctgg 799
|| ||||||||||| || |||||||||||||||||| |||||||||||||
Sbjct: 304 aagctgaactttggngcaatgaacatgtggtttttgttgaatccacctgg 353
>dbj|AK073015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149G11, full
insert sequence
Length = 2482
Score = 398 bits (201), Expect = e-108
Identities = 576/701 (82%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 1039 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 1098
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 1099 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 1158
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 1159 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 1218
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 1219 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 1278
Query: 684 gtggtcaactcaaccatcatgaatgctaaggagcctgaaaaacatgtatttcatcttgtt 743
|| || ||||||||||| |||||||||||||||||||| || ||||| || ||||||||
Sbjct: 1279 gttgtgaactcaaccataatgaatgctaaggagcctgagaagcatgttttccatcttgtg 1338
Query: 744 actgacaaactgaactttggggccatgaacatgtggtttttgctgaatccacctggggat 803
||||| || |||||||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 1339 actgataagttgaactttggagccatgaacatgtggtttttgctgaacccacctgggaag 1398
Query: 804 gcaacaatccatgtggaaaatgttgatgacttcaaatggttaaactcttcttactgccct 863
|| || |||||||| || || || ||||| || || ||||| ||||| || ||||| |||
Sbjct: 1399 gccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcgtactgtcct 1458
Query: 864 gttctgaagcagcttgagtctgcagccatgaaagaatattatttcaaggctgatcgtccg 923
||| | || ||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 1459 gttttacgacaacttgagtctgcagccatgaaagagtattatttcaaggctgaccgcccc 1518
Query: 924 aaaacactctctgctggttcttctaatctgaagtatcgaaacccaaaatatttgtccatg 983
| || |||||||| |||||||| || || |||||||| ||||| || || | ||||||
Sbjct: 1519 accactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatg 1578
Query: 984 ctcaatcatctaagattttacctcccacaagtctatcccaagctgaataaaattcttttc 1043
|| || || | |||||||| |||||||| |||||||| ||| || |||| || ||||||
Sbjct: 1579 ctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatacttttc 1638
Query: 1044 ctggatgatgatatagttgtccagagggacctaactggactctgggaggttgatcttaat 1103
|| |||||||| ||||| || |||| || | || ||| | ||||| ||||||||||||
Sbjct: 1639 cttgatgatgacatagtcgtgcagaaagatttgacaggattatgggacgttgatcttaat 1698
Query: 1104 ggaaatgtaaatggagccgtggaaacatgtggagagagttt 1144
|| || || ||||| || ||||| || ||||| ||||||||
Sbjct: 1699 gggaaggtcaatggtgcagtggagacctgtggggagagttt 1739
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Plus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 682 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 741
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 742 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 801
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 802 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 861
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 862 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 921
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 922 gctactgctgattctgaccttc 943
>dbj|AK119405.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E10, full
insert sequence
Length = 2494
Score = 379 bits (191), Expect = e-102
Identities = 583/713 (81%), Gaps = 3/713 (0%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 999 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 1058
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 1059 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 1118
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 1119 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 1178
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 1179 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 1238
Query: 684 gtggtcaactcaaccatcatgaatgctaaggagcctgaaaaacatgtatttcatcttgtt 743
||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||
Sbjct: 1239 gtg---aactcaaccatcatgaatgctaaggagcctgagaagcatgttttccatcttgtg 1295
Query: 744 actgacaaactgaactttggggccatgaacatgtggtttttgctgaatccacctggggat 803
||||| || |||||||||| |||||||||||||||||||||||||| || |||||| |
Sbjct: 1296 actgataagttgaactttggagccatgaacatgtggtttttgctgaaccctcctgggaag 1355
Query: 804 gcaacaatccatgtggaaaatgttgatgacttcaaatggttaaactcttcttactgccct 863
|| || |||||||| || || || ||||| || || ||||| ||||| || ||||| |||
Sbjct: 1356 gccaccatccatgttgagaacgtagatgaatttaagtggttgaactcatcatactgtcct 1415
Query: 864 gttctgaagcagcttgagtctgcagccatgaaagaatattatttcaaggctgatcgtccg 923
||| | ||| ||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 1416 gttttacggcaacttgagtctgcagccatgaaagagtattatttcaaagctgaccgcccc 1475
Query: 924 aaaacactctctgctggttcttctaatctgaagtatcgaaacccaaaatatttgtccatg 983
| || |||||||| |||||||| || || |||||||| ||||| || || | ||||||
Sbjct: 1476 accactctctctgcgggttcttcaaacctaaagtatcgtaaccccaagtacctctccatg 1535
Query: 984 ctcaatcatctaagattttacctcccacaagtctatcccaagctgaataaaattcttttc 1043
|| || || | |||||||| |||||||| |||||||| ||| || |||| || |||||
Sbjct: 1536 ctgaaccacttgagattttatctcccacaggtctatccaaagttggataagatatttttc 1595
Query: 1044 ctggatgatgatatagttgtccagagggacctaactggactctgggaggttgatcttaat 1103
|| |||||||| ||||| || |||| || | || ||| | ||||| ||||||||||||
Sbjct: 1596 cttgatgatgacatagtcgtgcagaaagatttgacgggattatgggatgttgatcttaat 1655
Query: 1104 ggaaatgtaaatggagccgtggaaacatgtggagagagttttcaccgatttga 1156
|| || || | || || ||||| || ||||| ||||||||||| || |||||
Sbjct: 1656 gggaaggtcaccggtgcagtggagacctgtggggagagttttcatcgttttga 1708
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Plus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 792 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 851
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 852 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 903
>gb|CF303948.1|CF303948 ABF1--03-K15.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-K15, mRNA sequence
Length = 574
Score = 313 bits (158), Expect = 1e-082
Identities = 253/285 (88%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 290 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 349
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 350 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 409
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgatcatggccagaatatattctgtt 245
|||||||||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 410 gcagattcaaaggttcgtctgatgcgtgatcaaatgatcatggccagaatatattctgtg 469
Query: 246 cttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaaggctcaaggaa 305
||||||||||| ||||||||||| ||||| |||| || || ||| | ||||| ||||||
Sbjct: 470 cttgccaaatccagggacaagctcgatcttcatcangatctactttccaggcttaaggaa 529
Query: 306 agccagcgatcccttggggaagctactgctgatgctgaacttccc 350
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 530 agccagcgctcccttggggaagctactgctgatgctgaacttccc 574
>gb|CF322517.1|CF322517 HDN--01-E16.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--01-E16, mRNA sequence
Length = 396
Score = 274 bits (138), Expect = 1e-070
Identities = 300/354 (84%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 43 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 102
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 103 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 162
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 163 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 222
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 223 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 282
Query: 684 gtggtcaactcaaccatcatgaatgctaaggagcctgaaaaacatgtatttcatcttgtt 743
|| || ||||||||||| |||||||||||||||||||| || ||||| || ||||||||
Sbjct: 283 gttgtgaactcaaccataatgaatgctaaggagcctgagaagcatgttttccatcttgtg 342
Query: 744 actgacaaactgaactttggggccatgaacatgtggtttttgctgaatccacct 797
||||| || |||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 343 actgataagttgaactttggagccatgaacatgtggtttttgctgaacccacct 396
>gb|AACV01020445.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020445, whole
genome shotgun sequence
Length = 25627
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 16872 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 16931
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 16932 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 16991
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 16992 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 17051
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 17052 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 17111
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 17112 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 17171
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 17172 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 17231
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 17232 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 17291
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 17292 gtggggagagttt 17304
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Plus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 22497 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 22556
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 22557 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 22616
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 22617 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 22676
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 22677 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 22736
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 22737 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 22796
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 22797 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 22856
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 22857 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 22916
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 22917 gtggggagagttttcatcgttttga 22941
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 22154 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 22213
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 22214 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 22273
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 22274 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 22333
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 22334 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 22393
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 22394 gtg---aactcaaccatcatgaatgctaagg 22421
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 16518 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 16577
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 16578 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 16637
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 16638 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 16697
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 16698 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 16757
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 16758 gttgtgaactcaaccataatgaatgctaagg 16788
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Plus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 16068 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 16127
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 16128 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 16187
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 16188 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 16247
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 16248 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 16307
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 16308 gctactgctgattctgaccttc 16329
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Plus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 21873 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 21932
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 21933 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 21984
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0515E01
Length = 140063
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 28271 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 28212
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 28211 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 28152
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 28151 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 28092
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 28091 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 28032
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 28031 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 27972
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 27971 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 27912
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 27911 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 27852
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 27851 gtggggagagttt 27839
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 22989 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 22930
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 22929 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 22870
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 22869 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 22810
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 22809 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 22750
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 22749 gtg---aactcaaccatcatgaatgctaagg 22722
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 22646 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 22587
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 22586 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 22527
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 22526 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 22467
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 22466 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 22407
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 22406 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 22347
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 22346 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 22287
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 22286 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 22227
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 22226 gtggggagagttttcatcgttttga 22202
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 28625 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 28566
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 28565 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 28506
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 28505 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 28446
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 28445 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 28386
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 28385 gttgtgaactcaaccataatgaatgctaagg 28355
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 29075 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 29016
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 29015 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 28956
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 28955 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 28896
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 28895 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 28836
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 28835 gctactgctgattctgaccttc 28814
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 23270 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 23211
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 23210 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 23159
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1254_E07
Length = 124028
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 80260 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 80201
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 80200 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 80141
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 80140 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 80081
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 80080 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 80021
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 80020 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 79961
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 79960 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 79901
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 79900 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 79841
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 79840 gtggggagagttt 79828
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 74978 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 74919
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 74918 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 74859
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 74858 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 74799
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 74798 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 74739
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 74738 gtg---aactcaaccatcatgaatgctaagg 74711
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 74635 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 74576
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 74575 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 74516
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 74515 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 74456
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 74455 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 74396
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 74395 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 74336
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 74335 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 74276
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 74275 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 74216
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 74215 gtggggagagttttcatcgttttga 74191
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 80614 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 80555
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 80554 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 80495
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 80494 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 80435
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 80434 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 80375
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 80374 gttgtgaactcaaccataatgaatgctaagg 80344
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 81064 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 81005
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 81004 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 80945
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 80944 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 80885
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 80884 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 80825
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 80824 gctactgctgattctgaccttc 80803
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 75259 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 75200
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 75199 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 75148
>ref|NT_107077.1| Oryza sativa (japonica cultivar-group)
Length = 1516644
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 456113 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 456054
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 456053 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 455994
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 455993 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 455934
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 455933 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 455874
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 455873 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 455814
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 455813 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 455754
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 455753 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 455694
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 455693 gtggggagagttt 455681
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 450831 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 450772
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 450771 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 450712
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 450711 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 450652
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 450651 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 450592
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 450591 gtg---aactcaaccatcatgaatgctaagg 450564
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 450488 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 450429
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 450428 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 450369
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 450368 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 450309
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 450308 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 450249
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 450248 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 450189
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 450188 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 450129
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 450128 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 450069
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 450068 gtggggagagttttcatcgttttga 450044
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 456467 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 456408
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 456407 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 456348
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 456347 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 456288
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 456287 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 456228
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 456227 gttgtgaactcaaccataatgaatgctaagg 456197
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 456917 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 456858
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 456857 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 456798
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 456797 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 456738
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 456737 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 456678
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 456677 gctactgctgattctgaccttc 456656
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 451112 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 451053
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 451052 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 451001
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 10044899 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 10044840
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 10044839 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 10044780
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 10044779 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 10044720
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 10044719 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 10044660
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 10044659 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 10044600
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 10044599 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 10044540
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 10044539 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 10044480
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 10044479 gtggggagagttt 10044467
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 10039617 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 10039558
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 10039557 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 10039498
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 10039497 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 10039438
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 10039437 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 10039378
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 10039377 gtg---aactcaaccatcatgaatgctaagg 10039350
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 10039274 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 10039215
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 10039214 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 10039155
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 10039154 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 10039095
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 10039094 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 10039035
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 10039034 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 10038975
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 10038974 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 10038915
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 10038914 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 10038855
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 10038854 gtggggagagttttcatcgttttga 10038830
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 10045253 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 10045194
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 10045193 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 10045134
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 10045133 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 10045074
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 10045073 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 10045014
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 10045013 gttgtgaactcaaccataatgaatgctaagg 10044983
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 10045703 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 10045644
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 10045643 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 10045584
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 10045583 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 10045524
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 10045523 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 10045464
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 10045463 gctactgctgattctgaccttc 10045442
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 10039898 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 10039839
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 10039838 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 10039787
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 19518710 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 19518651
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 19518650 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 19518591
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 19518590 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 19518531
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 19518530 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 19518471
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 19518470 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 19518411
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 19518410 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 19518351
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 19518350 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 19518291
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 19518290 gtggggagagttt 19518278
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 19513428 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 19513369
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 19513368 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 19513309
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 19513308 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 19513249
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 19513248 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 19513189
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 19513188 gtg---aactcaaccatcatgaatgctaagg 19513161
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 19513085 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 19513026
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 19513025 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 19512966
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 19512965 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 19512906
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 19512905 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 19512846
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 19512845 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 19512786
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 19512785 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 19512726
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 19512725 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 19512666
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 19512665 gtggggagagttttcatcgttttga 19512641
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 19519064 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 19519005
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 19519004 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 19518945
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 19518944 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 19518885
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 19518884 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 19518825
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 19518824 gttgtgaactcaaccataatgaatgctaagg 19518794
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 19519514 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 19519455
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 19519454 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 19519395
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 19519394 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 19519335
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 19519334 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 19519275
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 19519274 gctactgctgattctgaccttc 19519253
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 19513709 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 19513650
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 19513649 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 19513598
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 216 bits (109), Expect = 2e-053
Identities = 352/433 (81%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 20562613 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 20562554
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| ||||||||| | || || |||||||| || || || ||||
Sbjct: 20562553 acatgtggtttttgctgaacccacctgggaaggccaccatccatgttgagaacgtagatg 20562494
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | || ||||||||||||||||
Sbjct: 20562493 aatttaagtggttgaactcatcgtactgtcctgttttacgacaacttgagtctgcagcca 20562434
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||||||||| || || | || |||||||| |||||||| || |
Sbjct: 20562433 tgaaagagtattatttcaaggctgaccgccccaccactctctctgcgggttcttcaaacc 20562374
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 20562373 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 20562314
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || |||||||| |||||||| ||||| || |||| |
Sbjct: 20562313 aggtctatccaaagttggataagatacttttccttgatgatgacatagtcgtgcagaaag 20562254
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || ||||| || ||||| || |
Sbjct: 20562253 atttgacaggattatgggacgttgatcttaatgggaaggtcaatggtgcagtggagacct 20562194
Query: 1132 gtggagagagttt 1144
|||| ||||||||
Sbjct: 20562193 gtggggagagttt 20562181
Score = 192 bits (97), Expect = 3e-046
Identities = 228/271 (84%), Gaps = 3/271 (1%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 20557331 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 20557272
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 20557271 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 20557212
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 20557211 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 20557152
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 20557151 gaaaatccagagctctaccattatgcacttttctcagacaatgtcttggcagcatctgtt 20557092
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
||| |||||||||||||||||||||||||
Sbjct: 20557091 gtg---aactcaaccatcatgaatgctaagg 20557064
Score = 192 bits (97), Expect = 3e-046
Identities = 358/445 (80%)
Strand = Plus / Minus
Query: 712 aggagcctgaaaaacatgtatttcatcttgttactgacaaactgaactttggggccatga 771
|||||||||| || ||||| || |||||||| ||||| || |||||||||| |||||||
Sbjct: 20556988 aggagcctgagaagcatgttttccatcttgtgactgataagttgaactttggagccatga 20556929
Query: 772 acatgtggtttttgctgaatccacctggggatgcaacaatccatgtggaaaatgttgatg 831
||||||||||||||||||| || |||||| | || || |||||||| || || || ||||
Sbjct: 20556928 acatgtggtttttgctgaaccctcctgggaaggccaccatccatgttgagaacgtagatg 20556869
Query: 832 acttcaaatggttaaactcttcttactgccctgttctgaagcagcttgagtctgcagcca 891
| || || ||||| ||||| || ||||| |||||| | ||| ||||||||||||||||
Sbjct: 20556868 aatttaagtggttgaactcatcatactgtcctgttttacggcaacttgagtctgcagcca 20556809
Query: 892 tgaaagaatattatttcaaggctgatcgtccgaaaacactctctgctggttcttctaatc 951
||||||| ||||||||||| ||||| || || | || |||||||| |||||||| || |
Sbjct: 20556808 tgaaagagtattatttcaaagctgaccgccccaccactctctctgcgggttcttcaaacc 20556749
Query: 952 tgaagtatcgaaacccaaaatatttgtccatgctcaatcatctaagattttacctcccac 1011
| |||||||| ||||| || || | |||||||| || || | |||||||| |||||||
Sbjct: 20556748 taaagtatcgtaaccccaagtacctctccatgctgaaccacttgagattttatctcccac 20556689
Query: 1012 aagtctatcccaagctgaataaaattcttttcctggatgatgatatagttgtccagaggg 1071
| |||||||| ||| || |||| || ||||||| |||||||| ||||| || |||| |
Sbjct: 20556688 aggtctatccaaagttggataagatatttttccttgatgatgacatagtcgtgcagaaag 20556629
Query: 1072 acctaactggactctgggaggttgatcttaatggaaatgtaaatggagccgtggaaacat 1131
| | || ||| | ||||| |||||||||||||| || || | || || ||||| || |
Sbjct: 20556628 atttgacgggattatgggatgttgatcttaatgggaaggtcaccggtgcagtggagacct 20556569
Query: 1132 gtggagagagttttcaccgatttga 1156
|||| ||||||||||| || |||||
Sbjct: 20556568 gtggggagagttttcatcgttttga 20556544
Score = 188 bits (95), Expect = 5e-045
Identities = 227/271 (83%)
Strand = Plus / Minus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 20562967 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 20562908
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | || || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 20562907 cttagccagttggctgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 20562848
Query: 564 acgattgattattatcttctctctccagagaaaagaaagttcccaaatagtgagaacctg 623
|| || ||||| ||||| ||| | |||||||| |||||||| | || |||||| ||
Sbjct: 20562847 acaatagattactatctcctcccgttggagaaaaggaagttcccgaggagcgagaacttg 20562788
Query: 624 gaaaatcctgatctttaccattatgctcttttctcggacaatgttttggcagcatcagtt 683
|||||||| || || ||||| ||||| |||||||| |||||||| ||||||||||| |||
Sbjct: 20562787 gaaaatccagagctctaccactatgcacttttctcagacaatgtcttggcagcatctgtt 20562728
Query: 684 gtggtcaactcaaccatcatgaatgctaagg 714
|| || ||||||||||| |||||||||||||
Sbjct: 20562727 gttgtgaactcaaccataatgaatgctaagg 20562697
Score = 60.0 bits (30), Expect = 3e-006
Identities = 204/262 (77%)
Strand = Plus / Minus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 20563417 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 20563358
Query: 147 aaatacagcatctggagacgtgaaaatgaaaatgaaaaggcagattcaagggtccgtttg 206
||||||||||| |||||| || ||||| ||||| || ||||||||| || | |||
Sbjct: 20563357 aaatacagcatttggagaaaagagaatgagaatgagaactcagattcaacagttagattg 20563298
Query: 207 atgcgagatcaaatgatcatggccagaatatattctgttcttgccaaatcgagggacaag 266
||| |||| || || |||||||| | | |||||||| ||||| ||||| | | |||||
Sbjct: 20563297 atgagagaccagattatcatggcacgtgtttattctgtgcttgctaaatcaaagaacaag 20563238
Query: 267 cttgatctctatcaggagctgcttgcaaggctcaaggaaagccagcgatcccttggggaa 326
|||||| ||||| ||||||| | ||| |||||||||||||| | | |||| ||
Sbjct: 20563237 aatgatctttatcaagagctgcaaaccaggatcaaggaaagccagagggctgttggagag 20563178
Query: 327 gctactgctgatgctgaacttc 348
|||||||||||| |||| ||||
Sbjct: 20563177 gctactgctgattctgaccttc 20563156
Score = 48.1 bits (24), Expect = 0.011
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 237 tattctgttcttgccaaatcgagggacaagcttgatctctatcaggagctgcttgcaagg 296
|||||||| ||||| ||||| | | ||||| |||||| ||||| ||||||| | |||
Sbjct: 20557612 tattctgtgcttgctaaatcaaagaacaagaatgatctttatcaagagctgcaaaccagg 20557553
Query: 297 ctcaaggaaagccagcgatcccttggggaagctactgctgatgctgaacttc 348
|||||||||||||||| | |||| || |||||||||||| |||| ||||
Sbjct: 20557552 atcaaggaaagccagcgggctgttggagaggctactgctgattctgaccttc 20557501
>gb|CF305826.1|CF305826 HDA1--01-N15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--01-N15, mRNA sequence
Length = 498
Score = 155 bits (78), Expect = 7e-035
Identities = 138/158 (87%)
Strand = Plus / Plus
Query: 66 cagcaggatgatgaagcgttagttaaacttgagaatgcaggtatcgaacgttcaaaagct 125
||||||||||||||||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 341 cagcaggatgatgaagcactagttaagcttgagaatgctggaattgaacgttcaaaagcc 400
Query: 126 gttgactctgctgtgctgggaaaatacagcatctggagacgtgaaaatgaaaatgaaaag 185
||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 401 gttgattcggctgtccttggaaaatatagcatatggaggcgtgagaatgaaaatgaaaaa 460
Query: 186 gcagattcaagggtccgtttgatgcgagatcaaatgat 223
|||||||||| ||| ||| ||||||| |||||||||||
Sbjct: 461 gcagattcaaaggttcgtctgatgcgtgatcaaatgat 498
>gb|C26644.1|C26644 C26644 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12757_1A, mRNA sequence
Length = 414
Score = 89.7 bits (45), Expect = 3e-015
Identities = 115/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 247 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 306
Query: 504 cttagccagctagcagctaagacaatcccaaatggcatccattgtctttccatgcgctta 563
||||||||| | | || |||||||| ||||| |||| |||||| | || |||||||||
Sbjct: 307 cttagccag-ttggtgcgaagacaattccaaacagcattcattgtttgtcgatgcgctta 365
Query: 564 acgattgattattatct 580
|| || ||||| |||||
Sbjct: 366 acaatagattactatct 382
>gb|CB678467.1|CB678467 OSJNEe16I08.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe16I08 5', mRNA sequence
Length = 667
Score = 81.8 bits (41), Expect = 8e-013
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 444 agagcaatgcttcagtcagcagatgagcaggtccggagcttgaagaagcagagcaccttc 503
||||| |||||||||||||||||||| || ||| ||||||||||||||||||| || ||
Sbjct: 587 agagctatgcttcagtcagcagatgaacaagtcaggagcttgaagaagcagagtacattt 646
Query: 504 cttagccag 512
|||||||||
Sbjct: 647 cttagccag 655
Score = 52.0 bits (26), Expect = 7e-004
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 87 gttaaacttgagaatgcaggtatcgaacgttcaaaagctgttgactctgctgtgctggga 146
||||| || |||||||| | ||| ||||| ||||| ||||| || |||||||| || ||
Sbjct: 230 gttaagctggagaatgctgctattgaacgatcaaaggctgtagattctgctgtccttggg 289
Query: 147 aaatacagcatctggaga 164
||||||||||| ||||||
Sbjct: 290 aaatacagcatttggaga 307
>dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OSJNBb0008L09,
*** SEQUENCING IN PROGRESS ***
Length = 154909
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 140050 aacccaaaatacttgtccattctcaatcatcta 140082
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:B1142B04
Length = 161964
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 106272 aacccaaaatacttgtccattctcaatcatcta 106304
>gb|AACV01018784.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018784, whole
genome shotgun sequence
Length = 33949
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 4333 aacccaaaatacttgtccattctcaatcatcta 4301
>ref|XM_483148.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2181
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 1567 aacccaaaatacttgtccattctcaatcatcta 1599
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 24252469 aacccaaaatacttgtccattctcaatcatcta 24252501
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 15730915 aacccaaaatacttgtccattctcaatcatcta 15730947
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 23332921 aacccaaaatacttgtccattctcaatcatcta 23332953
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 963 aacccaaaatatttgtccatgctcaatcatcta 995
||||||||||| |||||||| ||||||||||||
Sbjct: 24490556 aacccaaaatacttgtccattctcaatcatcta 24490588
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,945,922
Number of Sequences: 438736
Number of extensions: 1945922
Number of successful extensions: 10024
Number of sequences better than 0.5: 30
Number of HSP's better than 0.5 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9685
Number of HSP's gapped (non-prelim): 280
length of query: 1208
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1187
effective length of database: 2,791,206,460
effective search space: 3313162068020
effective search space used: 3313162068020
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)