BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184970.2.1
(1043 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group)... 256 2e-065
dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA... 256 2e-065
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 256 2e-065
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 256 2e-065
gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) c... 248 5e-063
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 248 5e-063
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 248 5e-063
gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 ... 238 5e-060
gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 ... 238 5e-060
gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) c... 238 5e-060
ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 238 5e-060
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 238 5e-060
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 238 5e-060
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 238 5e-060
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 238 5e-060
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 238 5e-060
gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (j... 206 2e-050
gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (j... 206 2e-050
gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (j... 206 2e-050
dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group)... 206 2e-050
dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA... 206 2e-050
dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA... 206 2e-050
dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA... 206 2e-050
dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA... 206 2e-050
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 206 2e-050
emb|X56063.1|OSENDO O.sativa mRNA for endochitinase 206 2e-050
gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressin... 178 4e-042
gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmCh... 172 2e-040
gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing... 145 6e-032
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 125 5e-026
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 125 5e-026
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 125 5e-026
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 125 5e-026
dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA... 123 2e-025
emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase 123 2e-025
gb|C98575.1|C98575 C98575 Rice panicle at flowering stage O... 117 1e-023
gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flow... 109 3e-021
dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-021
gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11... 109 3e-021
gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) c... 109 3e-021
ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chi... 109 3e-021
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 109 3e-021
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 109 3e-021
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 109 3e-021
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 109 3e-021
gb|AU077767.1|AU077767 AU077767 Rice cDNA from young root O... 107 1e-020
dbj|AK059871.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-018
dbj|AK099355.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-018
gb|AACV01005819.1| Oryza sativa (japonica cultivar-group) c... 100 3e-018
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 100 3e-018
gb|AC140005.2| Oryza sativa (japonica cultivar-group) chrom... 100 3e-018
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 100 3e-018
gb|CF324345.1|CF324345 HDN--06-E15.g1 OsHDAC1-overexpressin... 98 1e-017
gb|AQ287446.1|AQ287446 nbxb0030E24f CUGI Rice BAC Library O... 94 2e-016
gb|D39758.1|D39758 RICS1345A Rice shoot Oryza sativa (japon... 94 2e-016
gb|AU077766.1|AU077766 AU077766 Rice cDNA from young root O... 94 2e-016
gb|CA756422.1|CA756422 BR030042000_PLATE_B01_2_010.ab1 OA O... 94 2e-016
dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group)... 94 2e-016
gb|CA754928.1|CA754928 BR030009000_PLATE_A07_49_051.ab1 OA ... 90 3e-015
gb|AU097550.1|AU097550 AU097550 Rice shoot Oryza sativa (ja... 88 1e-014
gb|CB000861.1|CB000861 S345K_B10 Rice cold stress germinati... 88 1e-014
gb|CF331229.1|CF331229 NACL--07-E08.g1 Rice callus plasmid ... 88 1e-014
gb|AU090548.1|AU090548 AU090548 Rice panicle at flowering s... 80 3e-012
gb|CF331228.1|CF331228 NACL--07-E08.b1 Rice callus plasmid ... 80 3e-012
gb|AACV01022034.1| Oryza sativa (japonica cultivar-group) c... 80 3e-012
ref|NM_197598.1| Oryza sativa (japonica cultivar-group) put... 80 3e-012
gb|C27564.1|C27564 C27564 Rice callus cDNA Oryza sativa (ja... 78 1e-011
dbj|AK063062.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
gb|AACV01000748.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
ref|NM_183568.1| Oryza sativa (japonica cultivar-group), p... 68 1e-008
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP002070.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CA755067.1|CA755067 BR030012000_PLATE_C07_51_050.ab1 OA ... 66 4e-008
dbj|AK101475.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK110261.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
gb|AC137616.2| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AACV01010846.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|C72797.1|C72797 C72797 Rice panicle at flowering stage O... 58 1e-005
gb|AU082109.1|AU082109 AU082109 Rice panicle at flowering s... 52 6e-004
gb|AU082112.1|AU082112 AU082112 Rice panicle at flowering s... 52 6e-004
gb|AU090556.1|AU090556 AU090556 Rice panicle at flowering s... 52 6e-004
gb|AU225608.1|AU225608 AU225608 Oryza sativa Koshihikari pi... 52 6e-004
gb|CF311469.1|CF311469 ABF--06-L04.g1 ABF3-overexpressing t... 52 6e-004
gb|CV721056.1|CV721056 YBH--02-L19.b1 Rice before heading y... 52 6e-004
gb|CV721323.1|CV721323 YBH--03-L02.b1 Rice before heading y... 52 6e-004
gb|CV721328.1|CV721328 YBH--03-L07.b1 Rice before heading y... 52 6e-004
gb|CV721450.1|CV721450 YBH--04-C19.b1 Rice before heading y... 52 6e-004
gb|CV721517.1|CV721517 YBH--04-G06.b1 Rice before heading y... 52 6e-004
gb|CV722006.1|CV722006 YBH--06-B03.b1 Rice before heading y... 52 6e-004
dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia... 52 6e-004
dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia... 52 6e-004
dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
gb|AC135418.3| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|AACV01010039.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
ref|XM_473013.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 52 6e-004
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromoso... 52 6e-004
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AU090553.1|AU090553 AU090553 Rice panicle at flowering s... 48 0.010
gb|CV720804.1|CV720804 YBH--01-O12.b1 Rice before heading y... 48 0.010
gb|C19108.1|C19108 C19108 Rice green shoot Oryza sativa (ja... 44 0.15
gb|AU090552.1|AU090552 AU090552 Rice panicle at flowering s... 44 0.15
gb|AU089729.1|AU089729 AU089729 Rice green shoot Oryza sati... 44 0.15
gb|AU096318.1|AU096318 AU096318 Rice green shoot Oryza sati... 44 0.15
gb|CB654174.1|CB654174 OSJNEc05O21.r OSJNEc Oryza sativa (j... 44 0.15
gb|CB683115.1|CB683115 OSJNEf11B13.f OSJNEf Oryza sativa (j... 44 0.15
gb|CF276539.1|CF276539 14ETL--01-L15.g1 Rice etiolated leaf... 44 0.15
gb|CF277595.1|CF277595 14ETL--03-D06.b1 Rice etiolated leaf... 44 0.15
gb|CF277868.1|CF277868 14ETL--03-J01.b1 Rice etiolated leaf... 44 0.15
gb|CF280049.1|CF280049 14ETL--06-J06.b1 Rice etiolated leaf... 44 0.15
gb|CF281458.1|CF281458 14ETL--08-I08.b1 Rice etiolated leaf... 44 0.15
gb|CF281459.1|CF281459 14ETL--08-I08.g1 Rice etiolated leaf... 44 0.15
gb|CF281716.1|CF281716 14ETL--08-O04.b1 Rice etiolated leaf... 44 0.15
gb|CF310438.1|CF310438 ABF--05-B10.b1 ABF3-overexpressing t... 44 0.15
gb|CF310609.1|CF310609 ABF--05-F17.b1 ABF3-overexpressing t... 44 0.15
gb|CF310877.1|CF310877 ABF--05-M16.b1 ABF3-overexpressing t... 44 0.15
gb|CF310948.1|CF310948 ABF--05-O14.b1 ABF3-overexpressing t... 44 0.15
dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA... 44 0.15
dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4... 44 0.15
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
gb|AACV01010037.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01015038.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
ref|XM_473009.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 44 0.15
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
>dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group) Cht-3 gene for endochitinase,
complete cds
Length = 2808
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 2781 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 2722
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 2721 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 2662
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 2661 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 2602
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 2601 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 2542
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 2541 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 2482
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 2481 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 2428
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 2427 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 2368
Query: 674 gccact 679
||||||
Sbjct: 2367 gccact 2362
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 2324 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 2265
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 2264 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 2214
>dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F06, full
insert sequence
Length = 1169
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 1026 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 967
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 966 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 907
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 906 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 847
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 846 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 787
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 786 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 727
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 726 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 673
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 672 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 613
Query: 674 gccact 679
||||||
Sbjct: 612 gccact 607
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 569 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 510
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 509 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 459
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 9700 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 9641
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 9640 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 9581
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 9580 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 9521
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 9520 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 9461
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 9460 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 9401
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 9400 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 9347
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 9346 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 9287
Query: 674 gccact 679
||||||
Sbjct: 9286 gccact 9281
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 13185 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 13126
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 13125 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 13066
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 13065 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 13006
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 13005 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 12952
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 12951 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 12892
Query: 678 ctg 680
|||
Sbjct: 12891 ctg 12889
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 12849 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 12790
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 12789 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 12739
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 9243 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 9184
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 9183 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 9133
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 13314 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 13255
Query: 312 gcagtagc 319
||||||||
Sbjct: 13254 gcagtagc 13247
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0548E04
Length = 138037
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 118934 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 118875
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 118874 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 118815
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 118814 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 118755
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 118754 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 118695
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 118694 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 118635
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 118634 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 118581
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 118580 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 118521
Query: 674 gccact 679
||||||
Sbjct: 118520 gccact 118515
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 122419 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 122360
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 122359 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 122300
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 122299 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 122240
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 122239 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 122186
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 122185 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 122126
Query: 678 ctg 680
|||
Sbjct: 122125 ctg 122123
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 122083 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 122024
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 122023 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 121973
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 118477 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 118418
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 118417 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 118367
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 122548 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 122489
Query: 312 gcagtagc 319
||||||||
Sbjct: 122488 gcagtagc 122481
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 9700 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 9641
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 9640 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 9581
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 9580 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 9521
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 9520 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 9461
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 9460 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 9401
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 9400 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 9347
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 9346 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 9287
Query: 674 gccact 679
||||||
Sbjct: 9286 gccact 9281
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 13185 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 13126
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 13125 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 13066
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 13065 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 13006
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 13005 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 12952
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 12951 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 12892
Query: 678 ctg 680
|||
Sbjct: 12891 ctg 12889
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 12849 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 12790
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 12789 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 12739
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 9243 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 9184
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 9183 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 9133
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 13314 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 13255
Query: 312 gcagtagc 319
||||||||
Sbjct: 13254 gcagtagc 13247
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 256 bits (129), Expect = 2e-065
Identities = 352/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 30372339 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 30372280
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 30372279 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 30372220
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 30372219 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 30372160
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 30372159 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 30372100
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 30372099 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 30372040
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 30372039 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 30371986
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||
Sbjct: 30371985 tgtagttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacg 30371926
Query: 674 gccact 679
||||||
Sbjct: 30371925 gccact 30371920
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 30375824 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 30375765
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 30375764 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 30375705
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 30375704 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 30375645
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 30375644 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 30375591
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 30375590 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 30375531
Query: 678 ctg 680
|||
Sbjct: 30375530 ctg 30375528
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 30375488 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 30375429
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 30375428 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 30375378
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 30371882 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 30371823
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 30371822 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 30371772
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 30375953 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 30375894
Query: 312 gcagtagc 319
||||||||
Sbjct: 30375893 gcagtagc 30375886
>gb|AACV01014964.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014964, whole
genome shotgun sequence
Length = 4179
Score = 248 bits (125), Expect = 5e-063
Identities = 351/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Plus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 1032 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 1091
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 1092 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 1151
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 1152 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 1211
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 1212 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 1271
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 1272 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 1331
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 1332 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 1385
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 1386 tgtagttgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacg 1445
Query: 674 gccact 679
||||||
Sbjct: 1446 gccact 1451
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 1489 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 1548
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 1549 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 1599
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 248 bits (125), Expect = 5e-063
Identities = 351/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 11703328 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 11703269
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 11703268 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 11703209
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 11703208 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 11703149
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 11703148 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 11703089
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 11703088 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 11703029
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 11703028 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 11702975
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 11702974 tgtagttgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacg 11702915
Query: 674 gccact 679
||||||
Sbjct: 11702914 gccact 11702909
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 11707655 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 11707596
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 11707595 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 11707536
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 11707535 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 11707476
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 11707475 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 11707422
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 11707421 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 11707362
Query: 678 ctg 680
|||
Sbjct: 11707361 ctg 11707359
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 11707319 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 11707260
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 11707259 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 11707209
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 11702871 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 11702812
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 11702811 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 11702761
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 11707784 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 11707725
Query: 312 gcagtagc 319
||||||||
Sbjct: 11707724 gcagtagc 11707717
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 248 bits (125), Expect = 5e-063
Identities = 351/426 (82%), Gaps = 9/426 (2%)
Strand = Plus / Minus
Query: 257 agggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagt 316
||||||||||||||||||| |||| ||| ||||| ||||||| ||| || ||||||||||
Sbjct: 29402065 agggcctctggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagt 29402006
Query: 317 agctggtgtagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcga 376
||| ||||||| | |||||| ||||||||| |||| ||| | |||||||| |
Sbjct: 29402005 agcgcttgtagaacccgatccggtcggccaccttgtcgtccgcgccgtgcccgcactcca 29401946
Query: 377 t---gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgt 433
||||||||||||||||||||| ||||||||||||||| | |||||| |||| ||
Sbjct: 29401945 caccgccgttgatgatgttggtgatctcgccgtagcccggaacgcgccccgccgcctggt 29401886
Query: 434 cggcggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggct 493
|| |||| || || |||||||| ||||| ||| ||||||||||||||||||||| ||
Sbjct: 29401885 cgtcggcggacggcgtccactggccggtgatcaccgcgtggcacgacggcttgggcgact 29401826
Query: 494 gcgccgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccacca 553
||| ||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 29401825 gcggcgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccacca 29401766
Query: 554 gctccgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagt 613
| ||||||||| | |||||||| | |||||| ||| ||| ||||| |||||||
Sbjct: 29401765 ggtccgggttgttgagcaggtcggagccgatgg------cctgccccgccgggccgtagt 29401712
Query: 614 tgtagttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacg 673
|||||||||||| || ||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct: 29401711 tgtagttgtaggtgatctggatgggtccccggccctagtacttcttgccggcggcgcacg 29401652
Query: 674 gccact 679
||||||
Sbjct: 29401651 gccact 29401646
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 29406392 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 29406333
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 29406332 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 29406273
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 29406272 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 29406213
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 29406212 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 29406159
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 29406158 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 29406099
Query: 678 ctg 680
|||
Sbjct: 29406098 ctg 29406096
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 29406056 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 29405997
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 29405996 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 29405946
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 29401608 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 29401549
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||| ||||||| |||||||||
Sbjct: 29401548 gccggtggtctcgtgggacgtctgcgccaggaaggcggcgacctcgcgctt 29401498
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 29406521 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 29406462
Query: 312 gcagtagc 319
||||||||
Sbjct: 29406461 gcagtagc 29406454
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
sequence
Length = 153247
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 95345 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 95286
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 95285 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 95226
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 95225 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 95166
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 95165 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 95112
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 95111 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 95052
Query: 678 ctg 680
|||
Sbjct: 95051 ctg 95049
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 95022 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 94963
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 94962 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 94903
Query: 830 gctt 833
||||
Sbjct: 94902 gctt 94899
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 95471 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 95412
Query: 315 gtagc 319
|||||
Sbjct: 95411 gtagc 95407
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
sequence
Length = 115326
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 36696 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 36637
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 36636 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 36577
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 36576 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 36517
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 36516 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 36463
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 36462 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 36403
Query: 678 ctg 680
|||
Sbjct: 36402 ctg 36400
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 36373 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 36314
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 36313 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 36254
Query: 830 gctt 833
||||
Sbjct: 36253 gctt 36250
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 36822 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 36763
Query: 315 gtagc 319
|||||
Sbjct: 36762 gtagc 36758
>gb|AACV01006925.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006925, whole
genome shotgun sequence
Length = 31428
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Plus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 23048 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 23107
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 23108 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 23167
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 23168 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 23227
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 23228 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 23281
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 23282 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 23341
Query: 678 ctg 680
|||
Sbjct: 23342 ctg 23344
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 22922 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 22981
Query: 315 gtagc 319
|||||
Sbjct: 22982 gtagc 22986
Score = 73.8 bits (37), Expect = 2e-010
Identities = 104/125 (83%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 23371 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 23430
Query: 770 cgttcggccagccgcc-cgtggtctcatgccccgtctgccccaagaacgcggcgagctcg 828
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| ||||
Sbjct: 23431 ccgtcgcccacccgccgggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcg 23490
Query: 829 cgctt 833
|||||
Sbjct: 23491 cgctt 23495
>ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 981
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 846 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 787
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 786 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 727
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 726 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 667
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 666 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 613
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 612 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 553
Query: 678 ctg 680
|||
Sbjct: 552 ctg 550
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 523 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 464
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 463 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 404
Query: 830 gctt 833
||||
Sbjct: 403 gctt 400
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 972 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 913
Query: 315 gtagc 319
|||||
Sbjct: 912 gtagc 908
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 683689 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 683630
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 683629 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 683570
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 683569 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 683510
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 683509 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 683456
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 683455 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 683396
Query: 678 ctg 680
|||
Sbjct: 683395 ctg 683393
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 683366 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 683307
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 683306 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 683247
Query: 830 gctt 833
||||
Sbjct: 683246 gctt 683243
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 683815 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 683756
Query: 315 gtagc 319
|||||
Sbjct: 683755 gtagc 683751
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 3886482 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 3886423
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 3886422 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 3886363
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 3886362 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 3886303
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 3886302 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 3886249
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 3886248 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 3886189
Query: 678 ctg 680
|||
Sbjct: 3886188 ctg 3886186
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 3886608 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 3886549
Query: 315 gtagc 319
|||||
Sbjct: 3886548 gtagc 3886544
Score = 73.8 bits (37), Expect = 2e-010
Identities = 104/125 (83%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 3886159 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 3886100
Query: 770 cgttcggccagccgcc-cgtggtctcatgccccgtctgccccaagaacgcggcgagctcg 828
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| ||||
Sbjct: 3886099 ccgtcgcccacccgccgggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcg 3886040
Query: 829 cgctt 833
|||||
Sbjct: 3886039 cgctt 3886035
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 17937189 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 17937130
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 17937129 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 17937070
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 17937069 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 17937010
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 17937009 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 17936956
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 17936955 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17936896
Query: 678 ctg 680
|||
Sbjct: 17936895 ctg 17936893
Score = 99.6 bits (50), Expect = 3e-018
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 2061774 acgtcgtggcacgacggcttgggtgactgcgccgtcatccagaaccagatggccgtcctg 2061715
Query: 526 aa 527
||
Sbjct: 2061714 aa 2061713
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 17937315 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17937256
Query: 315 gtagc 319
|||||
Sbjct: 17937255 gtagc 17937251
Score = 73.8 bits (37), Expect = 2e-010
Identities = 104/125 (83%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 17936866 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 17936807
Query: 770 cgttcggccagccgcc-cgtggtctcatgccccgtctgccccaagaacgcggcgagctcg 828
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| ||||
Sbjct: 17936806 ccgtcgcccacccgccgggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcg 17936747
Query: 829 cgctt 833
|||||
Sbjct: 17936746 cgctt 17936742
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 17197521 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 17197462
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 17197461 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 17197402
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 17197401 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 17197342
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 17197341 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 17197288
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 17197287 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17197228
Query: 678 ctg 680
|||
Sbjct: 17197227 ctg 17197225
Score = 99.6 bits (50), Expect = 3e-018
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 1841742 acgtcgtggcacgacggcttgggtgactgcgccgtcatccagaaccagatggccgtcctg 1841683
Query: 526 aa 527
||
Sbjct: 1841682 aa 1841681
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 17197198 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 17197139
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 17197138 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 17197079
Query: 830 gctt 833
||||
Sbjct: 17197078 gctt 17197075
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 17197647 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17197588
Query: 315 gtagc 319
|||||
Sbjct: 17197587 gtagc 17197583
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 238 bits (120), Expect = 5e-060
Identities = 257/303 (84%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||||||||||||||||||||| | | ||||| |||| |||| |
Sbjct: 17203952 gccgttgatgatgttggtgatgacgccgtagcccggcacgcggcccgccgcctggtcgtc 17203893
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
||| ||||| |||||||| ||||||| || ||||||||||||||||||||| |||||
Sbjct: 17203892 ggcggagggcgtccactggccggtggcgaccgcgtggcacgacggcttgggcgactgcgg 17203833
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||| | |||||||| | |||||| |||||||| || ||
Sbjct: 17203832 cgtcatccagaaccagaaggccgtgtcgaaggagacggtggcgtcggacgccacgaggtc 17203773
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||| || |||||||| | |||||| ||| ||| ||||||||||||||| |
Sbjct: 17203772 cgggtcgccgagcaggtcggcgccgatgg------cctgccccgccggcccgtagttgaa 17203719
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 17203718 gttgtaggagagctggatgggaccccggccgtagtacttcttgccggcggcgcacggcca 17203659
Query: 678 ctg 680
|||
Sbjct: 17203658 ctg 17203656
Score = 99.6 bits (50), Expect = 3e-018
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct: 1841744 acgtcgtggcacgacggcttgggtgactgcgccgtcatccagaaccagatggccgtcctg 1841685
Query: 526 aa 527
||
Sbjct: 1841684 aa 1841683
Score = 87.7 bits (44), Expect = 1e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 710 cggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcg 769
|||||| | ||||||||||||||||| ||||||||||||| | | ||| |||||||||||
Sbjct: 17203629 cggcggcgccgccgttctcctccttgaagcagtagccccacgcgtaggggccgtcgggcg 17203570
Query: 770 cgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgc 829
| ||| ||| ||||| |||||||| || ||||||| | | ||||||||||| |||||
Sbjct: 17203569 ccgtcgcccacccgccggtggtctcgtgggacgtctgcgcaaggaacgcggcgacctcgc 17203510
Query: 830 gctt 833
||||
Sbjct: 17203509 gctt 17203506
Score = 81.8 bits (41), Expect = 7e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 255 gaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgca 314
||||||||||||| ||||||| ||||||||| || ||||||||| ||| |||||||||||
Sbjct: 17204078 gaagggcctctggctgtagcaatccaagttggcgtcgtagctgacgccgaggatgtcgca 17204019
Query: 315 gtagc 319
|||||
Sbjct: 17204018 gtagc 17204014
>gb|CB672878.1|CB672878 OSJNEe07C10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07C10 3', mRNA sequence
Length = 770
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Plus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 233 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 292
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 293 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 352
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 353 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 412
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 413 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 466
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 467 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 526
Query: 678 ctg 680
|||
Sbjct: 527 ctg 529
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 569 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 628
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 629 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 679
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 104 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 163
Query: 312 gcagtagc 319
||||||||
Sbjct: 164 gcagtagc 171
>gb|CB684719.1|CB684719 OSJNEf14I06.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 5', mRNA sequence
Length = 839
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 528 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 469
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 468 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 409
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 408 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 349
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 348 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 295
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 294 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 235
Query: 678 ctg 680
|||
Sbjct: 234 ctg 232
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 192 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 133
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 132 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 82
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 657 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 598
Query: 312 gcagtagc 319
||||||||
Sbjct: 597 gcagtagc 590
>gb|CB684720.1|CB684720 OSJNEf14I06.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14I06 3', mRNA sequence
Length = 756
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Plus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 320 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 379
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 380 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 439
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 440 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 499
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 500 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 553
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 554 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 613
Query: 678 ctg 680
|||
Sbjct: 614 ctg 616
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 191 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 250
Query: 312 gcagtagc 319
||||||||
Sbjct: 251 gcagtagc 258
Score = 58.0 bits (29), Expect = 1e-005
Identities = 84/101 (83%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcg-gccagc 781
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| |
Sbjct: 656 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgccccacc 715
Query: 782 cgcccgtggtctcatgccccgtctgccccaagaacgcggcg 822
||||||||||||| ||| ||||||| ||| ||| ||||||
Sbjct: 716 cgcccgtggtctcgtgcgacgtctgcgccaggaaagcggcg 756
>dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group) Cht-1 gene for endochitinase,
complete cds
Length = 2739
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 2154 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 2095
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 2094 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 2035
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 2034 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 1975
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 1974 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 1921
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 1920 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 1861
Query: 678 ctg 680
|||
Sbjct: 1860 ctg 1858
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 1818 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 1759
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 1758 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 1708
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 2283 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 2224
Query: 312 gcagtagc 319
||||||||
Sbjct: 2223 gcagtagc 2216
>dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D05, full
insert sequence
Length = 1217
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 892 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 833
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 832 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 773
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 772 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 713
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 712 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 659
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 658 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 599
Query: 678 ctg 680
|||
Sbjct: 598 ctg 596
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 556 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 497
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 496 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 446
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 1021 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 962
Query: 312 gcagtagc 319
||||||||
Sbjct: 961 gcagtagc 954
>dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I21, full
insert sequence
Length = 1174
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 870 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 811
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 810 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 751
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 750 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 691
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 690 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 637
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 636 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 577
Query: 678 ctg 680
|||
Sbjct: 576 ctg 574
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 534 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 475
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 474 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 424
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 999 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 940
Query: 312 gcagtagc 319
||||||||
Sbjct: 939 gcagtagc 932
>dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C04, full
insert sequence
Length = 1136
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 889 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 830
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 829 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 770
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 769 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 710
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 709 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 656
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 655 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 596
Query: 678 ctg 680
|||
Sbjct: 595 ctg 593
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 553 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 494
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 493 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 443
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 1018 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 959
Query: 312 gcagtagc 319
||||||||
Sbjct: 958 gcagtagc 951
>dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A08, full
insert sequence
Length = 1141
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 894 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 835
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 834 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 775
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 774 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 715
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 714 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 661
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 660 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 601
Query: 678 ctg 680
|||
Sbjct: 600 ctg 598
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 558 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 499
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 498 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 448
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 1023 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 964
Query: 312 gcagtagc 319
||||||||
Sbjct: 963 gcagtagc 956
>gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014965, whole
genome shotgun sequence
Length = 41039
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 3246 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 3187
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 3186 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 3127
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 3126 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 3067
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 3066 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 3013
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 3012 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 2953
Query: 678 ctg 680
|||
Sbjct: 2952 ctg 2950
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 2910 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 2851
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 2850 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 2800
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 3375 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 3316
Query: 312 gcagtagc 319
||||||||
Sbjct: 3315 gcagtagc 3308
>emb|X56063.1|OSENDO O.sativa mRNA for endochitinase
Length = 1160
Score = 206 bits (104), Expect = 2e-050
Identities = 253/303 (83%), Gaps = 6/303 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 789 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 730
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 729 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 670
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 669 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 610
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 609 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 556
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
||||||||||| ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 555 gttgtaggagatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 496
Query: 678 ctg 680
|||
Sbjct: 495 ctg 493
Score = 93.7 bits (47), Expect = 2e-016
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||| | | ||| ||| |||||||| ||| ||| ||
Sbjct: 453 gttctcctccttgaagcagtagccccacgagtaggggccatcgggcgccgtcgcccaccc 394
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
|||||||||||| ||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 393 gcccgtggtctcgtgcgacgtctgcgccaggaacgcggcgacctcgcgctt 343
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 918 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 859
Query: 312 gcagtagc 319
||||||||
Sbjct: 858 gcagtagc 851
>gb|CF323069.1|CF323069 HDN--02-N11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-N11, mRNA sequence
Length = 593
Score = 178 bits (90), Expect = 4e-042
Identities = 236/285 (82%), Gaps = 6/285 (2%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 286 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 227
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 226 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 167
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 166 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 107
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||||||||
Sbjct: 106 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagttgta 53
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgcc 662
||||||||||| ||||||||| || |||||| |||||||||||||
Sbjct: 52 gttgtaggagatctggatgggtccccggccgtagtacttcttgcc 8
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 415 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 356
Query: 312 gcagtagc 319
||||||||
Sbjct: 355 gcagtagc 348
>gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmChiI-34 mRNA, partial cds
Length = 894
Score = 172 bits (87), Expect = 2e-040
Identities = 248/302 (82%), Gaps = 6/302 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 774 gccgttgatgatgttggtcaccacgccgtagcccggtacgcgccccgccgcctggtcgtt 715
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 714 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 655
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
|||||||||||||||| |||||||||| ||||| | |||||||||||||||||| ||
Sbjct: 654 ggtcatccagaaccagaacgccgtcttgagggagacggtggcgtccgacgccaccaggtc 595
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||| | |||||| ||| ||| ||||| |||||| ||||
Sbjct: 594 cgggttgctcagcaggttggagccgatgg------cctgccccgccgggccgtagctgta 541
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
|||||||| || ||||||||| || |||||| ||||||||||||||||| ||||||||||
Sbjct: 540 gttgtaggtgatctggatgggtccccggccgtagtacttcttgccggcggcgcacggcca 481
Query: 678 ct 679
||
Sbjct: 480 ct 479
Score = 101 bits (51), Expect = 7e-019
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 723 gttctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagcc 782
||||||||||||| ||||||||||||||| | ||| |||||||||||| | ||||||||
Sbjct: 441 gttctcctccttgaagcagtagccccaggagtaggggccgtcgggcgccgtgggccagcc 382
Query: 783 gcccgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgctt 833
||| |||||||| || ||||||| ||| ||||||||||| |||||||||
Sbjct: 381 gccggtggtctcgtgggacgtctgcgccaggaacgcggcgacctcgcgctt 331
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 261 cctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtagc 319
||||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||
Sbjct: 894 cctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagc 836
>gb|CF326349.1|CF326349 JMT1--05-N01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-N01, mRNA sequence
Length = 271
Score = 145 bits (73), Expect = 6e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||||||||||||| | |||||||||||||| | | |||||| |||| ||||
Sbjct: 259 gccgttgatgatgttggtcaccacgccgtagcccggcacgcgccccgccgcctggtcgtt 200
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| | ||| ||||||||| | || ||| ||||||||||||||||||||| |||||
Sbjct: 199 gccgttgggcgtccactgccctgtcatcaccgcgtggcacgacggcttgggcgactgcgg 140
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||
Sbjct: 139 cgtcatccagaaccagaacgccgtcttgaaggagacggtggcgtccgacgccaccaggtc 80
Query: 558 cgggttgctcagcaggt 574
|||||||||||||||||
Sbjct: 79 cgggttgctcagcaggt 63
Score = 143 bits (72), Expect = 2e-031
Identities = 137/159 (86%), Gaps = 6/159 (3%)
Strand = Plus / Minus
Query: 470 cgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttgaagg 529
||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct: 167 cgtggcacgacggcttgggcgactgcggcgtcatccagaaccagaacgccgtcttgaagg 108
Query: 530 agatgacggcgtccgacgccaccagctccgggttgctcagcaggtcctgggcgatggtcg 589
||| | |||||||||||||||||| ||||||||||||||||||| | ||||||
Sbjct: 107 agacggtggcgtccgacgccaccaggtccgggttgctcagcaggttggagccgatgg--- 51
Query: 590 cgtcctccccggccggcccgtagttgtagttgtaggaga 628
||| ||| ||||| ||||||||||||||||||||||
Sbjct: 50 ---cctgccccgccgggccgtagttgtagttgtaggaga 15
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
complete sequence
Length = 146303
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 96102 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 96043
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 96042 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 95983
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 95982 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 95935
Score = 97.6 bits (49), Expect = 1e-017
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 95774 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 95715
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
||||||||||| ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 95714 cgtcgggcgcggtcgcccacccgcccgtggtctcgtgggaggtctgcccgaggaacgcgg 95655
Query: 821 cgagctcgcgctt 833
||| ||| |||||
Sbjct: 95654 cgacctcacgctt 95642
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 87260 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 87201
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 87200 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 87141
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 87140 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 87081
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 87080 cgggttgctcagcaggtcc 87062
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 86798 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 86739
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 86738 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 86690
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 95844 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 95785
Query: 682 gcg 684
|||
Sbjct: 95784 gcg 95782
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 96305 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 96246
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 96245 cgtcgcagtagc 96234
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 96172 gccgttgatgatgttggtgatcacgccgtaccccgg 96137
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 87393 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 87350
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 547 gccaccagctccgggttgctcagcaggtcc 576
||||||||||||||||||| ||||||||||
Sbjct: 106783 gccaccagctccgggttgcccagcaggtcc 106754
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 86892 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 86836
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 106428 gcgcccttcacctccttgtagcagtagcccca 106397
>gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012113, whole
genome shotgun sequence
Length = 69919
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 15497 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 15438
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 15437 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 15378
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 15377 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 15330
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 6649 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 6590
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 6589 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 6530
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 6529 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 6470
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 6469 cgggttgctcagcaggtcc 6451
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 6187 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 6128
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 6127 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 6079
Score = 85.7 bits (43), Expect = 4e-014
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 15169 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 15110
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
|||||||| || ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 15109 cgtcgggcccggtcgcccaaccgcccgtggtctcgtgggaagtctgcccgaggaacgcgg 15050
Query: 821 cga 823
|||
Sbjct: 15049 cga 15047
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 15239 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 15180
Query: 682 gcg 684
|||
Sbjct: 15179 gcg 15177
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 15700 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 15641
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 15640 cgtcgcagtagc 15629
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 15567 gccgttgatgatgttggtgatcacgccgtaccccgg 15532
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 6782 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 6739
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 6281 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 6225
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 25834 gcgcccttcacctccttgtagcagtagcccca 25803
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 597430 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 597371
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 597370 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 597311
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 597310 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 597263
Score = 97.6 bits (49), Expect = 1e-017
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 597102 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 597043
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
||||||||||| ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 597042 cgtcgggcgcggtcgcccacccgcccgtggtctcgtgggaggtctgcccgaggaacgcgg 596983
Query: 821 cgagctcgcgctt 833
||| ||| |||||
Sbjct: 596982 cgacctcacgctt 596970
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 588588 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 588529
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 588528 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 588469
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 588468 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 588409
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 588408 cgggttgctcagcaggtcc 588390
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 588126 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 588067
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 588066 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 588018
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 597172 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 597113
Query: 682 gcg 684
|||
Sbjct: 597112 gcg 597110
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 597633 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 597574
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 597573 cgtcgcagtagc 597562
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 597500 gccgttgatgatgttggtgatcacgccgtaccccgg 597465
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 588721 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 588678
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 547 gccaccagctccgggttgctcagcaggtcc 576
||||||||||||||||||| ||||||||||
Sbjct: 608111 gccaccagctccgggttgcccagcaggtcc 608082
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 588220 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 588164
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 607756 gcgcccttcacctccttgtagcagtagcccca 607725
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 1703920 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 1703861
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 1703860 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 1703801
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 1703800 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 1703753
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 1695072 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 1695013
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 1695012 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 1694953
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 1694952 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 1694893
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 1694892 cgggttgctcagcaggtcc 1694874
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 1694610 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 1694551
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 1694550 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 1694502
Score = 85.7 bits (43), Expect = 4e-014
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 1703592 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 1703533
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
|||||||| || ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 1703532 cgtcgggcccggtcgcccaaccgcccgtggtctcgtgggaagtctgcccgaggaacgcgg 1703473
Query: 821 cga 823
|||
Sbjct: 1703472 cga 1703470
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 1703662 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 1703603
Query: 682 gcg 684
|||
Sbjct: 1703602 gcg 1703600
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 1704123 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 1704064
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 1704063 cgtcgcagtagc 1704052
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 1703990 gccgttgatgatgttggtgatcacgccgtaccccgg 1703955
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 1695205 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 1695162
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 1694704 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 1694648
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 1714257 gcgcccttcacctccttgtagcagtagcccca 1714226
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 19004233 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 19004174
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 19004173 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 19004114
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 19004113 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 19004066
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 18995385 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 18995326
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 18995325 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 18995266
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 18995265 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 18995206
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 18995205 cgggttgctcagcaggtcc 18995187
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 18994923 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 18994864
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 18994863 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 18994815
Score = 85.7 bits (43), Expect = 4e-014
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 19003905 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 19003846
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
|||||||| || ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 19003845 cgtcgggcccggtcgcccaaccgcccgtggtctcgtgggaagtctgcccgaggaacgcgg 19003786
Query: 821 cga 823
|||
Sbjct: 19003785 cga 19003783
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 19003975 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 19003916
Query: 682 gcg 684
|||
Sbjct: 19003915 gcg 19003913
Score = 60.0 bits (30), Expect = 3e-006
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 593 cctccccggccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagt 652
|||| |||||||||||||||||| |||| | || ||||||||||| |||||||| ||
Sbjct: 2176160 cctcgccggccggcccgtagttgaagttccacgacagctggatggggccgcggccatggt 2176101
Query: 653 acttcttgccggcgacgcacggccac 678
|| |||||||| || ||||||||||
Sbjct: 2176100 acgacttgccggggaagcacggccac 2176075
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 19004436 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 19004377
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 19004376 cgtcgcagtagc 19004365
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 19004303 gccgttgatgatgttggtgatcacgccgtaccccgg 19004268
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 18995518 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 18995475
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 18995017 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 18994961
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 19014570 gcgcccttcacctccttgtagcagtagcccca 19014539
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 125 bits (63), Expect = 5e-026
Identities = 146/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Minus
Query: 448 gtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgccgtcatccag 507
||||||||| | ||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 19292027 gtccactgccccgtgatcacgtcgtggcacgacggcttcggcgactgcggcgtcatccag 19291968
Query: 508 aaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctccgggttgctc 567
||||| | ||||||||||| || | || | ||||||||||||||||||||||||| ||
Sbjct: 19291967 aaccacagcgccgtcttgaacgacaccaccgggtccgacgccaccagctccgggttgttc 19291908
Query: 568 agcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgtagttg 621
|| ||||||| | |||||| |||| || |||||||||||||||||||||
Sbjct: 19291907 aggaggtcctcgccgatgg------cctctcccgccggcccgtagttgtagttg 19291860
Score = 97.6 bits (49), Expect = 1e-017
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 701 cgcagtagtcggcggtggcgccgttctcctccttgtagcagtagccccaggtgaaggcgc 760
|||||||| ||| ||||||||| ||||||||||| ||||||||||||| | | ||| ||
Sbjct: 19291699 cgcagtaggaggccgtggcgccgatctcctccttgaagcagtagccccacgagtaggggc 19291640
Query: 761 cgtcgggcgcgttcggccagccgcccgtggtctcatgccccgtctgccccaagaacgcgg 820
||||||||||| ||| ||| |||||||||||||| || |||||||| | ||||||||
Sbjct: 19291639 cgtcgggcgcggtcgcccacccgcccgtggtctcgtgggaggtctgcccgaggaacgcgg 19291580
Query: 821 cgagctcgcgctt 833
||| ||| |||||
Sbjct: 19291579 cgacctcacgctt 19291567
Score = 93.7 bits (47), Expect = 2e-016
Identities = 161/199 (80%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 19283185 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 19283126
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 19283125 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 19283066
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 19283065 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 19283006
Query: 558 cgggttgctcagcaggtcc 576
|||||||||||||||||||
Sbjct: 19283005 cgggttgctcagcaggtcc 19282987
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 19282723 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 19282664
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 19282663 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 19282615
Score = 69.9 bits (35), Expect = 3e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 622 taggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccactgg 681
|||||||| |||||||| ||||||||||||||||||||| | | | |||||||||||| |
Sbjct: 19291769 taggagagttggatggggccgcggccgaagtacttcttgtccggggcgcacggccactcg 19291710
Query: 682 gcg 684
|||
Sbjct: 19291709 gcg 19291707
Score = 60.0 bits (30), Expect = 3e-006
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 593 cctccccggccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagt 652
|||| |||||||||||||||||| |||| | || ||||||||||| |||||||| ||
Sbjct: 2157713 cctcgccggccggcccgtagttgaagttccacgacagctggatggggccgcggccatggt 2157654
Query: 653 acttcttgccggcgacgcacggccac 678
|| |||||||| || ||||||||||
Sbjct: 2157653 acgacttgccggggaagcacggccac 2157628
Score = 56.0 bits (28), Expect = 4e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaagga 307
|||||||||| |||||||||| ||||||||| | |||| ||||||| |||||| || |
Sbjct: 19292230 cgctgttgaacggcctctggtcgtagcagtcgaggttgctcccgtagccgatgccgagca 19292171
Query: 308 tgtcgcagtagc 319
|||||||||||
Sbjct: 19292170 cgtcgcagtagc 19292159
Score = 56.0 bits (28), Expect = 4e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
||||||||||||||||||||| |||||||| |||||
Sbjct: 19292097 gccgttgatgatgttggtgatcacgccgtaccccgg 19292062
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 19283318 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 19283275
Score = 52.0 bits (26), Expect = 6e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 547 gccaccagctccgggttgctcagcaggtcc 576
||||||||||||||||||| ||||||||||
Sbjct: 19302708 gccaccagctccgggttgcccagcaggtcc 19302679
Score = 50.1 bits (25), Expect = 0.002
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 623 aggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggccact 679
||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||||
Sbjct: 19282817 aggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggccact 19282761
Score = 48.1 bits (24), Expect = 0.010
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 718 gcgccgttctcctccttgtagcagtagcccca 749
||||| ||| ||||||||||||||||||||||
Sbjct: 19302353 gcgcccttcacctccttgtagcagtagcccca 19302322
>dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-C03, full
insert sequence
Length = 979
Score = 123 bits (62), Expect = 2e-025
Identities = 243/302 (80%), Gaps = 6/302 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 535 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 476
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 475 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 416
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 415 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 356
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||||| |||| || |||||||| |||||||||||||| |
Sbjct: 355 cgggttgctcagcaggtccaccccgat-----cgccctccccg-ccggcccgtagttgaa 302
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
|||| ||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||
Sbjct: 301 gttgaaggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggcca 242
Query: 678 ct 679
||
Sbjct: 241 ct 240
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 202 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 143
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 142 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 94
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 668 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 625
>emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase
Length = 1186
Score = 123 bits (62), Expect = 2e-025
Identities = 243/302 (80%), Gaps = 6/302 (1%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccggaagcctccccgcggccttgtcggc 437
|||||||| |||||||||||| |||||||| ||||| || |||||| || ||||||
Sbjct: 870 gccgttgacgatgttggtgatcacgccgtaccccggcgcccgccccgccgcggcgtcggc 811
Query: 438 ggccgagggggtccactgctcggtggccacgtcgtggcacgacggcttgggcggctgcgc 497
| |||||| | |||| || | ||| ||||||||||| |||||||||| | |||||
Sbjct: 810 cggcgagggcgcccaccgccccgtgatcacgtcgtggctcgacggcttgttcccctgcgg 751
Query: 498 cgtcatccagaaccagatggccgtcttgaaggagatgacggcgtccgacgccaccagctc 557
||||||||||||||| | ||||||||||| || | ||||||| ||||||||| ||
Sbjct: 750 cgtcatccagaaccacagcgccgtcttgaacgacaccgtcgcgtccgtcgccaccaggtc 691
Query: 558 cgggttgctcagcaggtcctgggcgatggtcgcgtcctccccggccggcccgtagttgta 617
||||||||||||||||||| |||| || |||||||| |||||||||||||| |
Sbjct: 690 cgggttgctcagcaggtccaccccgat-----cgccctccccg-ccggcccgtagttgaa 637
Query: 618 gttgtaggagagctggatgggcccgcggccgaagtacttcttgccggcgacgcacggcca 677
|||| ||||||| |||||||| ||||||||| ||||||| ||||| | ||||||||||
Sbjct: 636 gttgaaggagagttggatggggccgcggccgtagtacttgcggccgggggcgcacggcca 577
Query: 678 ct 679
||
Sbjct: 576 ct 575
Score = 89.7 bits (45), Expect = 3e-015
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 726 ctcctccttgtagcagtagccccaggtgaaggcgccgtcgggcgcgttcggccagccgcc 785
||||| |||| ||||||||||||||| ||||| ||||||||||||| ||||||| |||||
Sbjct: 537 ctcctgcttgaagcagtagccccaggagaaggggccgtcgggcgcggtcggccacccgcc 478
Query: 786 cgtggtctcatgccccgtctgccccaagaacgcggcgagctcgcgcttc 834
|||||||| || ||||| |||| ||||||||||| ||| ||||||
Sbjct: 477 ggtggtctcgtgggaggtctggcccaggaacgcggcgacctcccgcttc 429
Score = 56.0 bits (28), Expect = 4e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 248 cgctgttgaagggcctctggttgtagcagtccaagttgtcgccg 291
|||||||||| |||||||||||||||||||| | |||| |||||
Sbjct: 1003 cgctgttgaacggcctctggttgtagcagtcgaggttgccgccg 960
>gb|C98575.1|C98575 C98575 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0422_6Z, mRNA sequence
Length = 614
Score = 117 bits (59), Expect = 1e-023
Identities = 91/101 (90%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 473 ggcacgacgg-cttgggcggctgcgccgtcatccagaaccagatggccgtcttgaaggag 531
|||||||||| |||||||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 215 ggcacgacgggcttgggcgantgcggcgtcatccagaaccagaacgccgtcttgaaggag 156
Query: 532 atgacggcgtccgacgccaccagctccgggttgctcagcag 572
| | |||||||||||||||||| |||||||||||||||||
Sbjct: 155 anggtggcgtccgacgccaccaggtccgggttgctcagcag 115
Score = 111 bits (56), Expect = 8e-022
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 601 gccggcccgtagttgtagttgtaggagagctggatgggcccgcggccgaagtacttcttg 660
||||| |||||||||||||||||||||| ||||||||| || |||||| |||||||||||
Sbjct: 93 gccgggccgtagttgtagttgtaggagatctggatgggtccccggccgtagtacttcttg 34
Query: 661 ccggcgacgcacggccactg 680
|||||| |||||||||||||
Sbjct: 33 ccggcggcgcacggccactg 14
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 252 gttgaagggcctctggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtc 311
|||||| ||||||||||||||||||||||||||| |||||||||||| ||| | |||||
Sbjct: 441 gttgaaaggcctctggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtc 382
Query: 312 gcagtagc 319
||||||||
Sbjct: 381 gcagtagc 374
>gb|BP185058.1|BP185058 BP185058 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 12YPR007, mRNA
sequence
Length = 943
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 578 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 519
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 518 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 468
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 210 gatgaaggcgtcgtacgtgtagaagcccc 182
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 640
>dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042L15, full
insert sequence
Length = 1073
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 589 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 530
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 529 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 479
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 221 gatgaaggcgtcgtacgtgtagaagcccc 193
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 692 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 651
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
sequence
Length = 138824
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 89404 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 89345
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 89344 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 89294
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 104130 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 104071
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 104070 aaggagaccacggcgt 104055
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 104218 gccgttgatgatgttggtgatgacgccgtaccccgg 104183
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 102069 gatgaaggcgtcgtacgtgtagaagcccc 102041
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 88196 gatgaaggcgtcgtacgtgtagaagcccc 88168
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 89507 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 89466
>gb|AACV01022031.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022031, whole
genome shotgun sequence
Length = 24222
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 16108 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 16049
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 16048 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 15998
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 14900 gatgaaggcgtcgtacgtgtagaagcccc 14872
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 16211 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 16170
>ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chitinase
(OSJNBb0015I11.14), mRNA
Length = 924
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 563 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 504
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 503 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 453
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 195 gatgaaggcgtcgtacgtgtagaagcccc 167
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 666 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 625
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 2610146 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 2610087
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 2610086 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 2610036
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 2624872 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 2624813
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 2624812 aaggagaccacggcgt 2624797
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 2624960 gccgttgatgatgttggtgatgacgccgtaccccgg 2624925
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 2622811 gatgaaggcgtcgtacgtgtagaagcccc 2622783
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 2608938 gatgaaggcgtcgtacgtgtagaagcccc 2608910
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 2610249 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 2610208
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 8658597 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 8658538
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 8658537 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 8658487
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 8676344 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 8676285
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 8676284 aaggagaccacggcgt 8676269
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 8676432 gccgttgatgatgttggtgatgacgccgtaccccgg 8676397
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 8674283 gatgaaggcgtcgtacgtgtagaagcccc 8674255
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 8657389 gatgaaggcgtcgtacgtgtagaagcccc 8657361
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 8658700 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 8658659
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 19524391 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 19524332
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 19524331 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 19524281
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 19542138 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 19542079
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 19542078 aaggagaccacggcgt 19542063
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 19542226 gccgttgatgatgttggtgatgacgccgtaccccgg 19542191
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 19540077 gatgaaggcgtcgtacgtgtagaagcccc 19540049
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 19523183 gatgaaggcgtcgtacgtgtagaagcccc 19523155
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 19524494 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 19524453
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 20687952 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 20687893
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 20687892 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 20687842
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 20702678 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 20702619
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 20702618 aaggagaccacggcgt 20702603
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 20702766 gccgttgatgatgttggtgatgacgccgtaccccgg 20702731
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 20700617 gatgaaggcgtcgtacgtgtagaagcccc 20700589
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 20686744 gatgaaggcgtcgtacgtgtagaagcccc 20686716
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 20688055 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 20688014
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 109 bits (55), Expect = 3e-021
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 20699224 acgtcgtggcacgacggcttgttcccctgcgccgtcatccagaaccagatggccgtcttg 20699165
Query: 526 aaggagatgacggcgtccgacgccaccagctccgggttgctcagcaggtcc 576
||||||| |||||||| | | |||||| || ||||||| || |||||||
Sbjct: 20699164 aaggagaccacggcgtcggtggacaccaggtctgggttgcccaccaggtcc 20699114
Score = 79.8 bits (40), Expect = 3e-012
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 466 acgtcgtggcacgacggcttgggcggctgcgccgtcatccagaaccagatggccgtcttg 525
|||||||||| |||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 20713950 acgtcgtggctcgacggcttgttgtactgccccgtcatccagaaccagatggccgtcttg 20713891
Query: 526 aaggagatgacggcgt 541
||||||| |||||||
Sbjct: 20713890 aaggagaccacggcgt 20713875
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 378 gccgttgatgatgttggtgatgacgccgtagcccgg 413
|||||||||||||||||||||||||||||| |||||
Sbjct: 20714038 gccgttgatgatgttggtgatgacgccgtaccccgg 20714003
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 20711889 gatgaaggcgtcgtacgtgtagaagcccc 20711861
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 888 gatgaaggcgtcgtacgtgtagaagcccc 916
|||||||||||||||||||||||||||||
Sbjct: 20698016 gatgaaggcgtcgtacgtgtagaagcccc 20697988
Score = 56.0 bits (28), Expect = 4e-005
Identities = 39/42 (92%), Gaps = 3/42 (7%)
Strand = Plus / Minus
Query: 366 gccgcactcgatgccg---ttgatgatgttggtgatgacgcc 404
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 20699327 gccgcactcgatgccgccgttgatgatgttggtgatgacgcc 20699286
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,616,280
Number of Sequences: 438736
Number of extensions: 1616280
Number of successful extensions: 14878
Number of sequences better than 0.5: 145
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 13316
Number of HSP's gapped (non-prelim): 1500
length of query: 1043
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1022
effective length of database: 2,791,206,460
effective search space: 2852613002120
effective search space used: 2852613002120
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)