BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115147.2.2
(1310 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK100871.1| Oryza sativa (japonica cultivar-group) cDNA... 505 e-140
gb|AC135190.2| Oryza sativa (japonica cultivar-group) chrom... 505 e-140
gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) c... 505 e-140
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 505 e-140
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 505 e-140
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 505 e-140
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 505 e-140
dbj|AK070275.1| Oryza sativa (japonica cultivar-group) cDNA... 486 e-134
dbj|AK072863.1| Oryza sativa (japonica cultivar-group) cDNA... 371 e-100
dbj|AK100113.1| Oryza sativa (japonica cultivar-group) cDNA... 363 2e-097
dbj|AK069927.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
dbj|AK099256.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 192 3e-046
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 192 3e-046
gb|AACV01008210.1| Oryza sativa (japonica cultivar-group) c... 192 3e-046
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
gb|C71877.1|C71877 C71877 Rice panicle at flowering stage O... 174 8e-041
gb|C98861.1|C98861 C98861 Rice panicle at flowering stage O... 141 1e-030
gb|C71815.1|C71815 C71815 Rice panicle at flowering stage O... 113 2e-022
gb|C72529.1|C72529 C72529 Rice panicle at flowering stage O... 96 6e-017
gb|C98676.1|C98676 C98676 Rice panicle at flowering stage O... 68 1e-008
gb|AU093907.1|AU093907 AU093907 Rice panicle at flowering s... 62 8e-007
gb|AU163637.1|AU163637 AU163637 Rice panicle at flowering s... 62 8e-007
dbj|AP003821.1| Oryza sativa (japonica cultivar-group) chro... 60 3e-006
gb|AACV01016945.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_479388.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
dbj|AP005182.5| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AK119935.1| Oryza sativa (japonica cultivar-group) cDNA... 52 8e-004
gb|AU093789.1|AU093789 AU093789 Rice panicle at flowering s... 48 0.012
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
dbj|AK073604.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
dbj|AK105996.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
dbj|AK109798.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
gb|AC105729.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|AC119797.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbar... 46 0.048
gb|AACV01002323.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
gb|AACV01006387.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
gb|AACV01022372.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.048
ref|NM_191159.1| Oryza sativa (japonica cultivar-group), p... 46 0.048
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 46 0.048
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 46 0.048
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 46 0.048
dbj|AP003768.3| Oryza sativa (japonica cultivar-group) geno... 46 0.048
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.048
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.048
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
dbj|AP004993.3| Oryza sativa (japonica cultivar-group) geno... 44 0.19
dbj|AP005382.3| Oryza sativa (japonica cultivar-group) geno... 44 0.19
gb|AACV01013500.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.19
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.19
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.19
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 44 0.19
>dbj|AK100871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E05, full
insert sequence
Length = 1750
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Plus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 385 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 444
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 445 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 504
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 505 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 564
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 565 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 624
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 625 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 684
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 685 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 744
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 745 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 804
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 805 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 864
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 865 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 924
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 925 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 984
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 985 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 1038
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 1039 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 1098
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 1099 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 1158
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 1159 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 1212
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 1213 gcccttcatcggcacgcactac 1234
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBa0064H09, complete sequence
Length = 146742
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Minus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 90046 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 89987
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 89986 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 89927
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 89926 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 89867
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 89866 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 89807
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 89806 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 89747
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 89746 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 89687
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 89686 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 89627
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 89626 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 89567
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 89566 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 89507
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 89506 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 89447
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 89446 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 89393
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 89392 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 89333
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 89332 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 89273
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 89272 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 89219
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 89218 gcccttcatcggcacgcactac 89197
Score = 371 bits (187), Expect = e-100
Identities = 664/822 (80%), Gaps = 12/822 (1%)
Strand = Plus / Minus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 85862 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 85803
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 85802 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 85743
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 85742 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 85683
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 85682 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 85623
Query: 556 gacgcgccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttc 615
|||||||||||||||||||| || ||| |||| ||||||||||||||| | || ||||||
Sbjct: 85622 gacgcgccgctggccaagccgggtgccgagggtggccaggcggtggcgctccgcctgttc 85563
Query: 616 gggaccaagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgac 675
|| |||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 85562 ggcaccaaggcagccatctacaactgcaccatcgacggcgggcaggacaccctatacgat 85503
Query: 676 cacaagggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttc 735
|||||||| || |||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 85502 cacaagggactccactacatcaaggatagcctcatcatgggcagcgtcgacttcatcttt 85443
Query: 736 ggcttcggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcg 795
|| ||||| | ||||||||| |||| ||||| || || |||||||||| |
Sbjct: 85442 ggattcgggagatcactctacgagggctgcaccatcgtctccgtcaccaaggaggtgtcc 85383
Query: 796 gtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcg 855
|||||||||||||||||| | ||||| |||||||||||||||| || | ||||||||
Sbjct: 85382 gtgctgacggcgcagcagaggaccaagaccatcgagggcgccatagaaagtggcttctcc 85323
Query: 856 ttcaagaactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctgg 915
|||||||||||||||||| | | ||||||| |||||||||| ||||| || |||
Sbjct: 85322 ttcaagaactgcagcatcaaag--gacaagggc----agatctacctcggccgggcatgg 85269
Query: 916 ggggactcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtg 975
||||| || || |||||||| ||||| |||||| | ||| |||||||||| || |
Sbjct: 85268 ggggattcgtcgcgggtggtgtactcctacacggacatgtccaaggaggtggtgccgata 85209
Query: 976 ggttgggacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttc 1035
|| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 85208 gggtgggatggctggaacatcgccaagccggagagcagcgggatctactacggcgagttc 85149
Query: 1036 aagtgctttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggac 1095
|||||| ||||||||| | |||||| |||||||||||||| |||||||| |||
Sbjct: 85148 aagtgcaccggccccggctccgacgcc------aagaagagggtgggttgggcgcttgac 85095
Query: 1096 ctcaccgaggcgcaggccaagccattcgtcggcacacactac 1137
||||||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 85094 ctcaccgcggatcaggccaagcccttcatcggcacgcactac 85053
>gb|AACV01023759.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023759, whole
genome shotgun sequence
Length = 55202
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Plus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 40139 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 40198
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 40199 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 40258
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 40259 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 40318
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 40319 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 40378
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 40379 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 40438
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 40439 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 40498
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 40499 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 40558
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 40559 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 40618
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 40619 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 40678
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 40679 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 40738
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 40739 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 40792
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 40793 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 40852
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 40853 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 40912
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 40913 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 40966
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 40967 gcccttcatcggcacgcactac 40988
Score = 341 bits (172), Expect = 6e-091
Identities = 550/675 (81%), Gaps = 12/675 (1%)
Strand = Plus / Plus
Query: 463 ggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtggagtcggac 522
||||||||||| ||||| || || || || |||||| |||| | || || ||||| |||
Sbjct: 44476 ggcaaggacggcaagcccgtcggaaccgtcgggagcaccaccgtcgccgtcgagtccgac 44535
Query: 523 tacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcccggcgcc 582
||||||| ||| |||||||| || ||| |||||||||||||||||||||||| || |||
Sbjct: 44536 tacttcatggcctacggcgtcgtcttcaagaacgacgcgccgctggccaagccgggtgcc 44595
Query: 583 aagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgc 642
|||| ||||||||||||||| | || |||||||| |||||| | ||||||||||||
Sbjct: 44596 gagggtggccaggcggtggcgctccgcctgttcggcaccaaggcagccatctacaactgc 44655
Query: 643 accatcgacggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggc 702
|||||||||||||| |||||||| || ||||| |||||||| || |||||| ||||||
Sbjct: 44656 accatcgacggcgggcaggacaccctatacgatcacaagggactccactacatcaaggat 44715
Query: 703 tgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttctacgaggac 762
|||||||| ||||||||||||||||||||| || ||||| | ||||||||| |
Sbjct: 44716 agcctcatcatgggcagcgtcgacttcatctttggattcgggagatcactctacgagggc 44775
Query: 763 tgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcgttccaag 822
||| ||||| || || |||||||||| | |||||||||||||||||| | |||||
Sbjct: 44776 tgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagaggaccaag 44835
Query: 823 tccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcggcggcgtc 882
|||||||||||||||| || | |||||||| |||||||||||||||||| | | |
Sbjct: 44836 accatcgagggcgccatagaaagtggcttctccttcaagaactgcagcatcaaag--gac 44893
Query: 883 aagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggtctactcg 942
|||||| |||||||||| ||||| || |||||||| || || |||||||| |||||
Sbjct: 44894 aagggc----agatctacctcggccgggcatggggggattcgtcgcgggtggtgtactcc 44949
Query: 943 tacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagatcgccaag 1002
|||||| | ||| |||||||||| || | || ||||| |||||| | |||||||||
Sbjct: 44950 tacacggacatgtccaaggaggtggtgccgatagggtgggatggctggaacatcgccaag 45009
Query: 1003 ccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgctgacgcc 1062
|||||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 45010 ccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctccgacgcc 45069
Query: 1063 aagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaagccattc 1122
|||||||||||||| |||||||| |||||||||| || ||||||||||| |||
Sbjct: 45070 ------aagaagagggtgggttgggcgcttgacctcaccgcggatcaggccaagcccttc 45123
Query: 1123 gtcggcacacactac 1137
||||||| ||||||
Sbjct: 45124 atcggcacgcactac 45138
Score = 54.0 bits (27), Expect = 2e-004
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagccc-ggcgctcagttccgcgagaagctgtt 374
|||||||||||||| ||||| || ||||||||| ||||| ||||||| |||||||| |
Sbjct: 44324 aacaccaagcgcgtcatcctcgacctcaagcccgggcgccgagttccgggagaagctcct 44383
Query: 375 cctgaacatca 385
||| |||||||
Sbjct: 44384 cctcaacatca 44394
>gb|CH401266.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000103
genomic scaffold, whole genome shotgun sequence
Length = 1217508
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Plus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 959720 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 959779
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 959780 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 959839
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 959840 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 959899
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 959900 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 959959
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 959960 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 960019
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 960020 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 960079
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 960080 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 960139
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 960140 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 960199
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 960200 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 960259
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 960260 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 960319
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 960320 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 960373
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 960374 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 960433
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 960434 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 960493
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 960494 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 960547
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 960548 gcccttcatcggcacgcactac 960569
Score = 341 bits (172), Expect = 6e-091
Identities = 550/675 (81%), Gaps = 12/675 (1%)
Strand = Plus / Plus
Query: 463 ggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtggagtcggac 522
||||||||||| ||||| || || || || |||||| |||| | || || ||||| |||
Sbjct: 964057 ggcaaggacggcaagcccgtcggaaccgtcgggagcaccaccgtcgccgtcgagtccgac 964116
Query: 523 tacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcccggcgcc 582
||||||| ||| |||||||| || ||| |||||||||||||||||||||||| || |||
Sbjct: 964117 tacttcatggcctacggcgtcgtcttcaagaacgacgcgccgctggccaagccgggtgcc 964176
Query: 583 aagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgc 642
|||| ||||||||||||||| | || |||||||| |||||| | ||||||||||||
Sbjct: 964177 gagggtggccaggcggtggcgctccgcctgttcggcaccaaggcagccatctacaactgc 964236
Query: 643 accatcgacggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggc 702
|||||||||||||| |||||||| || ||||| |||||||| || |||||| ||||||
Sbjct: 964237 accatcgacggcgggcaggacaccctatacgatcacaagggactccactacatcaaggat 964296
Query: 703 tgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttctacgaggac 762
|||||||| ||||||||||||||||||||| || ||||| | ||||||||| |
Sbjct: 964297 agcctcatcatgggcagcgtcgacttcatctttggattcgggagatcactctacgagggc 964356
Query: 763 tgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcgttccaag 822
||| ||||| || || |||||||||| | |||||||||||||||||| | |||||
Sbjct: 964357 tgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagaggaccaag 964416
Query: 823 tccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcggcggcgtc 882
|||||||||||||||| || | |||||||| |||||||||||||||||| | | |
Sbjct: 964417 accatcgagggcgccatagaaagtggcttctccttcaagaactgcagcatcaaag--gac 964474
Query: 883 aagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggtctactcg 942
|||||| |||||||||| ||||| || |||||||| || || |||||||| |||||
Sbjct: 964475 aagggc----agatctacctcggccgggcatggggggattcgtcgcgggtggtgtactcc 964530
Query: 943 tacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagatcgccaag 1002
|||||| | ||| |||||||||| || | || ||||| |||||| | |||||||||
Sbjct: 964531 tacacggacatgtccaaggaggtggtgccgatagggtgggatggctggaacatcgccaag 964590
Query: 1003 ccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgctgacgcc 1062
|||||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 964591 ccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctccgacgcc 964650
Query: 1063 aagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaagccattc 1122
|||||||||||||| |||||||| |||||||||| || ||||||||||| |||
Sbjct: 964651 ------aagaagagggtgggttgggcgcttgacctcaccgcggatcaggccaagcccttc 964704
Query: 1123 gtcggcacacactac 1137
||||||| ||||||
Sbjct: 964705 atcggcacgcactac 964719
Score = 54.0 bits (27), Expect = 2e-004
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagccc-ggcgctcagttccgcgagaagctgtt 374
|||||||||||||| ||||| || ||||||||| ||||| ||||||| |||||||| |
Sbjct: 963905 aacaccaagcgcgtcatcctcgacctcaagcccgggcgccgagttccgggagaagctcct 963964
Query: 375 cctgaacatca 385
||| |||||||
Sbjct: 963965 cctcaacatca 963975
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Plus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 21890585 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 21890644
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 21890645 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 21890704
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 21890705 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 21890764
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 21890765 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 21890824
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 21890825 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 21890884
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 21890885 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 21890944
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 21890945 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 21891004
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 21891005 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 21891064
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 21891065 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 21891124
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 21891125 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 21891184
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 21891185 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 21891238
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 21891239 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 21891298
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 21891299 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 21891358
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 21891359 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 21891412
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 21891413 gcccttcatcggcacgcactac 21891434
Score = 341 bits (172), Expect = 6e-091
Identities = 550/675 (81%), Gaps = 12/675 (1%)
Strand = Plus / Plus
Query: 463 ggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtggagtcggac 522
||||||||||| ||||| || || || || |||||| |||| | || || ||||| |||
Sbjct: 21894922 ggcaaggacggcaagcccgtcggaaccgtcgggagcaccaccgtcgccgtcgagtccgac 21894981
Query: 523 tacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcccggcgcc 582
||||||| ||| |||||||| || ||| |||||||||||||||||||||||| || |||
Sbjct: 21894982 tacttcatggcctacggcgtcgtcttcaagaacgacgcgccgctggccaagccgggtgcc 21895041
Query: 583 aagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgc 642
|||| ||||||||||||||| | || |||||||| |||||| | ||||||||||||
Sbjct: 21895042 gagggtggccaggcggtggcgctccgcctgttcggcaccaaggcagccatctacaactgc 21895101
Query: 643 accatcgacggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggc 702
|||||||||||||| |||||||| || ||||| |||||||| || |||||| ||||||
Sbjct: 21895102 accatcgacggcgggcaggacaccctatacgatcacaagggactccactacatcaaggat 21895161
Query: 703 tgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttctacgaggac 762
|||||||| ||||||||||||||||||||| || ||||| | ||||||||| |
Sbjct: 21895162 agcctcatcatgggcagcgtcgacttcatctttggattcgggagatcactctacgagggc 21895221
Query: 763 tgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcgttccaag 822
||| ||||| || || |||||||||| | |||||||||||||||||| | |||||
Sbjct: 21895222 tgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagaggaccaag 21895281
Query: 823 tccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcggcggcgtc 882
|||||||||||||||| || | |||||||| |||||||||||||||||| | | |
Sbjct: 21895282 accatcgagggcgccatagaaagtggcttctccttcaagaactgcagcatcaaag--gac 21895339
Query: 883 aagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggtctactcg 942
|||||| |||||||||| ||||| || |||||||| || || |||||||| |||||
Sbjct: 21895340 aagggc----agatctacctcggccgggcatggggggattcgtcgcgggtggtgtactcc 21895395
Query: 943 tacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagatcgccaag 1002
|||||| | ||| |||||||||| || | || ||||| |||||| | |||||||||
Sbjct: 21895396 tacacggacatgtccaaggaggtggtgccgatagggtgggatggctggaacatcgccaag 21895455
Query: 1003 ccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgctgacgcc 1062
|||||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 21895456 ccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctccgacgcc 21895515
Query: 1063 aagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaagccattc 1122
|||||||||||||| |||||||| |||||||||| || ||||||||||| |||
Sbjct: 21895516 ------aagaagagggtgggttgggcgcttgacctcaccgcggatcaggccaagcccttc 21895569
Query: 1123 gtcggcacacactac 1137
||||||| ||||||
Sbjct: 21895570 atcggcacgcactac 21895584
Score = 54.0 bits (27), Expect = 2e-004
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagccc-ggcgctcagttccgcgagaagctgtt 374
|||||||||||||| ||||| || ||||||||| ||||| ||||||| |||||||| |
Sbjct: 21894770 aacaccaagcgcgtcatcctcgacctcaagcccgggcgccgagttccgggagaagctcct 21894829
Query: 375 cctgaacatca 385
||| |||||||
Sbjct: 21894830 cctcaacatca 21894840
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 563 cgctggccaagcccggcgccaagggcg 589
|||||||||||||||||| ||||||||
Sbjct: 2804426 cgctggccaagcccggcggcaagggcg 2804400
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Minus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 26785416 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 26785357
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 26785356 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 26785297
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 26785296 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 26785237
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 26785236 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 26785177
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 26785176 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 26785117
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 26785116 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 26785057
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 26785056 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 26784997
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 26784996 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 26784937
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 26784936 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 26784877
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 26784876 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 26784817
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 26784816 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 26784763
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 26784762 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 26784703
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 26784702 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 26784643
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 26784642 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 26784589
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 26784588 gcccttcatcggcacgcactac 26784567
Score = 371 bits (187), Expect = e-100
Identities = 664/822 (80%), Gaps = 12/822 (1%)
Strand = Plus / Minus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 26781232 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 26781173
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 26781172 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 26781113
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 26781112 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 26781053
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 26781052 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 26780993
Query: 556 gacgcgccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttc 615
|||||||||||||||||||| || ||| |||| ||||||||||||||| | || ||||||
Sbjct: 26780992 gacgcgccgctggccaagccgggtgccgagggtggccaggcggtggcgctccgcctgttc 26780933
Query: 616 gggaccaagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgac 675
|| |||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 26780932 ggcaccaaggcagccatctacaactgcaccatcgacggcgggcaggacaccctatacgat 26780873
Query: 676 cacaagggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttc 735
|||||||| || |||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 26780872 cacaagggactccactacatcaaggatagcctcatcatgggcagcgtcgacttcatcttt 26780813
Query: 736 ggcttcggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcg 795
|| ||||| | ||||||||| |||| ||||| || || |||||||||| |
Sbjct: 26780812 ggattcgggagatcactctacgagggctgcaccatcgtctccgtcaccaaggaggtgtcc 26780753
Query: 796 gtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcg 855
|||||||||||||||||| | ||||| |||||||||||||||| || | ||||||||
Sbjct: 26780752 gtgctgacggcgcagcagaggaccaagaccatcgagggcgccatagaaagtggcttctcc 26780693
Query: 856 ttcaagaactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctgg 915
|||||||||||||||||| | | ||||||| |||||||||| ||||| || |||
Sbjct: 26780692 ttcaagaactgcagcatcaaag--gacaagggc----agatctacctcggccgggcatgg 26780639
Query: 916 ggggactcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtg 975
||||| || || |||||||| ||||| |||||| | ||| |||||||||| || |
Sbjct: 26780638 ggggattcgtcgcgggtggtgtactcctacacggacatgtccaaggaggtggtgccgata 26780579
Query: 976 ggttgggacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttc 1035
|| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 26780578 gggtgggatggctggaacatcgccaagccggagagcagcgggatctactacggcgagttc 26780519
Query: 1036 aagtgctttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggac 1095
|||||| ||||||||| | |||||| |||||||||||||| |||||||| |||
Sbjct: 26780518 aagtgcaccggccccggctccgacgcc------aagaagagggtgggttgggcgcttgac 26780465
Query: 1096 ctcaccgaggcgcaggccaagccattcgtcggcacacactac 1137
||||||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 26780464 ctcaccgcggatcaggccaagcccttcatcggcacgcactac 26780423
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 505 bits (255), Expect = e-140
Identities = 711/862 (82%), Gaps = 12/862 (1%)
Strand = Plus / Minus
Query: 276 caccaacatcaccgcggcgctggaggatatcccggtgagcaacaccaagcgcgtgatcct 335
||||| |||||| |||||||||||| | |||| | | | |||| |||||||| |||||
Sbjct: 27112651 caccaccatcacggcggcgctggagaaggtccccgaggggaacaagaagcgcgtcatcct 27112592
Query: 336 ggatctcaagcccggcgctcagttccgcgagaagctgttcctgaacatcagcaagccgtt 395
|| |||||||||||||| ||||||| |||||| | ||||| ||| |||||||||| ||
Sbjct: 27112591 cgacctcaagcccggcgccgagttccgggagaagatcttcctcaacctcagcaagccctt 27112532
Query: 396 catcacgttccggtcggaccccaagaagcccgccgtcgtggtctggaacgacactgcggc 455
|||||| ||| ||| ||||||||||| || || || | | ||||| |||||| |||||
Sbjct: 27112531 catcaccttcaagtccgaccccaagaacccggcggtgatcgcctggagcgacacggcggc 27112472
Query: 456 cacgaacggcaaggacggtaagccggtgggcacggtggggagcgccacgctggcggtgga 515
|| | ||||||||||| ||||| || ||||| ||||||||| |||| | || | ||
Sbjct: 27112471 gaccaggggcaaggacggcaagcccgtcggcaccgtggggagcaccaccgtcgccatcga 27112412
Query: 516 gtcggactacttcacggcgtacggcgtggtgttccggaacgacgcgccgctggccaagcc 575
||| ||||||||| |||| | ||||| |||||| ||||||||||||| ||||||||||
Sbjct: 27112411 gtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcgccgatggccaagcc 27112352
Query: 576 cggcgccaagggcggccaggcggtggcggtgcggctgttcgggaccaagacgcagatcta 635
||||||| |||||||||||||||||||| | || || ||||| |||||| || |||||
Sbjct: 27112351 cggcgccgagggcggccaggcggtggcgctccgcctcttcggcaccaaggcggccatcta 27112292
Query: 636 caactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcactactt 695
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 27112291 caactgcaccatcgacggcggccaggacacgctgtacgaccacaagggcctccactacat 27112232
Query: 696 caagggctgcctcatccggggcagcgtcgacttcatcttcggcttcggccgcagcttcta 755
||||| ||||||||| |||||||||||||||||||||||| ||||| | | |||
Sbjct: 27112231 caaggattgcctcatcatgggcagcgtcgacttcatcttcgggttcgggagatcgtacta 27112172
Query: 756 cgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctgacggcgcagcagcg 815
||||| |||| ||||| || || |||||||||| | |||||||||||||||||| |
Sbjct: 27112171 cgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctgacggcgcagcagag 27112112
Query: 816 ttccaagtccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcgg 875
|||| |||||||||||||| |||| | ||||||||| ||||||||||||||||||
Sbjct: 27112111 gagcaagaccatcgagggcgccctcgagagcggcttctccttcaagaactgcagcatcaa 27112052
Query: 876 cggcgtcaagggcggacagatctacctgggccgcgcctggggggactcctcccgggtggt 935
|| | |||||| ||||||||||||| || || |||||||| || || ||||||||
Sbjct: 27112051 gggag--aagggc----agatctacctggggcgagcatggggggaatcgtcgcgggtggt 27111998
Query: 936 ctactcgtacacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagat 995
||| | ||||| | ||| |||||||||| ||||||||||||||||||||| | ||
Sbjct: 27111997 gtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgggacggctggaacat 27111938
Query: 996 cgccaagccggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgc 1055
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
Sbjct: 27111937 cgccaagccggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctc 27111878
Query: 1056 tgacgccaagaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaa 1115
|||||| |||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 27111877 cgacgcc------aagaagagggtgggttgggcgctcgacctcaccgaggagcaggccaa 27111824
Query: 1116 gccattcgtcggcacacactac 1137
||| ||| ||||||| ||||||
Sbjct: 27111823 gcccttcatcggcacgcactac 27111802
Score = 371 bits (187), Expect = e-100
Identities = 664/822 (80%), Gaps = 12/822 (1%)
Strand = Plus / Minus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 27108467 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 27108408
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 27108407 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 27108348
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 27108347 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 27108288
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 27108287 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 27108228
Query: 556 gacgcgccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttc 615
|||||||||||||||||||| || ||| |||| ||||||||||||||| | || ||||||
Sbjct: 27108227 gacgcgccgctggccaagccgggtgccgagggtggccaggcggtggcgctccgcctgttc 27108168
Query: 616 gggaccaagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgac 675
|| |||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 27108167 ggcaccaaggcagccatctacaactgcaccatcgacggcgggcaggacaccctatacgat 27108108
Query: 676 cacaagggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttc 735
|||||||| || |||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 27108107 cacaagggactccactacatcaaggatagcctcatcatgggcagcgtcgacttcatcttt 27108048
Query: 736 ggcttcggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcg 795
|| ||||| | ||||||||| |||| ||||| || || |||||||||| |
Sbjct: 27108047 ggattcgggagatcactctacgagggctgcaccatcgtctccgtcaccaaggaggtgtcc 27107988
Query: 796 gtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcg 855
|||||||||||||||||| | ||||| |||||||||||||||| || | ||||||||
Sbjct: 27107987 gtgctgacggcgcagcagaggaccaagaccatcgagggcgccatagaaagtggcttctcc 27107928
Query: 856 ttcaagaactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctgg 915
|||||||||||||||||| | | ||||||| |||||||||| ||||| || |||
Sbjct: 27107927 ttcaagaactgcagcatcaaag--gacaagggc----agatctacctcggccgggcatgg 27107874
Query: 916 ggggactcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtg 975
||||| || || |||||||| ||||| |||||| | ||| |||||||||| || |
Sbjct: 27107873 ggggattcgtcgcgggtggtgtactcctacacggacatgtccaaggaggtggtgccgata 27107814
Query: 976 ggttgggacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttc 1035
|| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 27107813 gggtgggatggctggaacatcgccaagccggagagcagcgggatctactacggcgagttc 27107754
Query: 1036 aagtgctttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggac 1095
|||||| ||||||||| | |||||| |||||||||||||| |||||||| |||
Sbjct: 27107753 aagtgcaccggccccggctccgacgcc------aagaagagggtgggttgggcgcttgac 27107700
Query: 1096 ctcaccgaggcgcaggccaagccattcgtcggcacacactac 1137
||||||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 27107699 ctcaccgcggatcaggccaagcccttcatcggcacgcactac 27107658
>dbj|AK070275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I04, full
insert sequence
Length = 1773
Score = 486 bits (245), Expect = e-134
Identities = 675/816 (82%), Gaps = 13/816 (1%)
Strand = Plus / Plus
Query: 322 aagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttcctgaac 381
|||||||| ||||| || |||||||||||||| ||||||| |||||| | ||||| |||
Sbjct: 456 aagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagatcttcctcaac 515
Query: 382 atcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtggtctgg 441
|||||||||| |||||||| ||| ||| ||||||||||| || || || | | ||||
Sbjct: 516 ctcagcaagcccttcatcaccttcaagtccgaccccaagaacccggcggtgatcgcctgg 575
Query: 442 aacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtggggagcgcc 501
| |||||| ||||| || | ||||||||||| ||||| || ||||| ||||||||| ||
Sbjct: 576 agcgacacggcggcgaccaggggcaaggacggcaagcccgtcggcaccgtggggagcacc 635
Query: 502 acgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaacgacgcg 561
|| | || | ||||| ||||||||| |||| | ||||| |||||| ||||||||||
Sbjct: 636 accgtcgccatcgagtccgactacttcgtggcgcatggcgtcgtgttcaagaacgacgcg 695
Query: 562 ccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttcgggacc 621
||| ||||||||||||||||| |||||||||||||||||||| | || || ||||| |||
Sbjct: 696 ccgatggccaagcccggcgccgagggcggccaggcggtggcgctccgcctcttcggcacc 755
Query: 622 aagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgaccacaag 681
||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 756 aaggcggccatctacaactgcaccatcgacggcggccaggacacgctgtacgaccacaag 815
Query: 682 ggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttcggcttc 741
||||| |||||| |||||| ||||||||| |||||||||||||||||||||||| |||
Sbjct: 816 ggcctccactacatcaaggattgcctcatcatgggcagcgtcgacttcatcttcgggttc 875
Query: 742 ggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcggtgctg 801
|| | | |||||||| |||| ||||| || || |||||||||| | ||||||
Sbjct: 876 gggagatcgtactacgagggctgcaccatcgtctccgtcaccaaggaggtgtccgtgctg 935
Query: 802 acggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcgttcaag 861
|||||||||||| | |||| |||||||||||||| |||| | ||||||||| ||||||
Sbjct: 936 acggcgcagcagaggagcaagaccatcgagggcgccctcgagagcggcttctccttcaag 995
Query: 862 aactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctggggggac 921
|||||||||||| || | |||||| ||||||||||||| || || ||||||||
Sbjct: 996 aactgcagcatcaagggag--aagggc----agatctacctggggcgagcatggggggaa 1049
Query: 922 tcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtgggttgg 981
|| || |||||||| ||| | ||||| | ||| |||||||||| ||||||||||||
Sbjct: 1050 tcgtcgcgggtggtgtacgcctacaccgacatgtccaaggaggtggtgcccgtgggttgg 1109
Query: 982 gacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttcaagtgc 1041
||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1110 gacggctggaacatcgccaagccggagagcagcgggatctactacggcgagttcaagtgc 1169
Query: 1042 tttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggacctcacc 1101
||||||||| | |||||| |||||||||||||| |||||||| |||||||||
Sbjct: 1170 accggccccggctccgacgcc------aagaagagggtgggttgggcgctcgacctcacc 1223
Query: 1102 gaggcgcaggccaagccattcgtcggcacacactac 1137
|||| | |||||||||| ||| ||||||| ||||||
Sbjct: 1224 gaggag-aggccaagcccttcatcggcacgcactac 1258
>dbj|AK072863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143K08, full
insert sequence
Length = 1838
Score = 371 bits (187), Expect = e-100
Identities = 664/822 (80%), Gaps = 12/822 (1%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 393 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 452
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 453 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 512
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 513 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 572
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 573 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 632
Query: 556 gacgcgccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttc 615
|||||||||||||||||||| || ||| |||| ||||||||||||||| | || ||||||
Sbjct: 633 gacgcgccgctggccaagccgggtgccgagggtggccaggcggtggcgctccgcctgttc 692
Query: 616 gggaccaagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgac 675
|| |||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 693 ggcaccaaggcagccatctacaactgcaccatcgacggcgggcaggacaccctatacgat 752
Query: 676 cacaagggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttc 735
|||||||| || |||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 753 cacaagggactccactacatcaaggatagcctcatcatgggcagcgtcgacttcatcttt 812
Query: 736 ggcttcggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcg 795
|| ||||| | ||||||||| |||| ||||| || || |||||||||| |
Sbjct: 813 ggattcgggagatcactctacgagggctgcaccatcgtctccgtcaccaaggaggtgtcc 872
Query: 796 gtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcg 855
|||||||||||||||||| | ||||| |||||||||||||||| || | ||||||||
Sbjct: 873 gtgctgacggcgcagcagaggaccaagaccatcgagggcgccatagaaagtggcttctcc 932
Query: 856 ttcaagaactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctgg 915
|||||||||||||||||| | | ||||||| |||||||||| ||||| || |||
Sbjct: 933 ttcaagaactgcagcatcaaag--gacaagggc----agatctacctcggccgggcatgg 986
Query: 916 ggggactcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtg 975
||||| || || |||||||| ||||| |||||| | ||| |||||||||| || |
Sbjct: 987 ggggattcgtcgcgggtggtgtactcctacacggacatgtccaaggaggtggtgccgata 1046
Query: 976 ggttgggacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttc 1035
|| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1047 gggtgggatggctggaacatcgccaagccggagagcagcgggatctactacggcgagttc 1106
Query: 1036 aagtgctttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggac 1095
|||||| ||||||||| | |||||| |||||||||||||| |||||||| |||
Sbjct: 1107 aagtgcaccggccccggctccgacgcc------aagaagagggtgggttgggcgcttgac 1160
Query: 1096 ctcaccgaggcgcaggccaagccattcgtcggcacacactac 1137
||||||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 1161 ctcaccgcggatcaggccaagcccttcatcggcacgcactac 1202
>dbj|AK100113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006A20, full
insert sequence
Length = 1777
Score = 363 bits (183), Expect = 2e-097
Identities = 663/822 (80%), Gaps = 12/822 (1%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 391 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 450
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 451 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 510
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 511 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 570
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 571 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 630
Query: 556 gacgcgccgctggccaagcccggcgccaagggcggccaggcggtggcggtgcggctgttc 615
|||||||||||||||||||| || ||| |||| ||||||||||||||| | || ||||||
Sbjct: 631 gacgcgccgctggccaagccgggtgccgagggtggccaggcggtggcgctccgcctgttc 690
Query: 616 gggaccaagacgcagatctacaactgcaccatcgacggcggacaggacacgctgtacgac 675
|| |||||| | |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 691 ggcaccaaggcagccatctacaactgcaccatcgacggcgggcaggacaccctatacgat 750
Query: 676 cacaagggcctgcactacttcaagggctgcctcatccggggcagcgtcgacttcatcttc 735
|||||||| || |||||| |||||| |||||||| |||||||||||||||||||||
Sbjct: 751 cacaagggactccactacatcaaggatagcctcatcatgggcagcgtcgacttcatcttt 810
Query: 736 ggcttcggccgcagcttctacgaggactgccgcatcgagtcggtggtcaaggaggtggcg 795
|| ||||| | ||||||||| |||| ||||| || || |||||||||| |
Sbjct: 811 ggattcgggagatcactctacgagggctgcaccatcgtctccgtcaccaaggaggtgtcc 870
Query: 796 gtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcgacaccggcttctcg 855
|||||||||||||||||| | ||||| |||||||||||||||| || | ||||||||
Sbjct: 871 gtgctgacggcgcagcagaggaccaagaccatcgagggcgccatagaaagtggcttctcc 930
Query: 856 ttcaagaactgcagcatcggcggcgtcaagggcggacagatctacctgggccgcgcctgg 915
|||||||||||||||||| | | ||||||| |||||||| | ||||| || |||
Sbjct: 931 ttcaagaactgcagcatcaaag--gacaagggc----agatctacatcggccgggcatgg 984
Query: 916 ggggactcctcccgggtggtctactcgtacacgaagatgggggaggaggtggtccccgtg 975
||||| || || |||||||| ||||| |||||| | ||| |||||||||| || |
Sbjct: 985 ggggattcgtcgcgggtggtgtactcctacacggacatgtccaaggaggtggtgccgata 1044
Query: 976 ggttgggacggctggcagatcgccaagccggagagcagcggcatctactacggcgagttc 1035
|| ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1045 gggtgggatggctggaacatcgccaagccggagagcagcgggatctactacggcgagttc 1104
Query: 1036 aagtgctttggccccggcgctgacgccaagaagaagaagagggtggggtgggcgctggac 1095
|||||| ||||||||| | |||||| |||||||||||||| |||||||| |||
Sbjct: 1105 aagtgcaccggccccggctccgacgcc------aagaagagggtgggttgggcgcttgac 1158
Query: 1096 ctcaccgaggcgcaggccaagccattcgtcggcacacactac 1137
||||||| || ||||||||||| ||| ||||||| ||||||
Sbjct: 1159 ctcaccgcggatcaggccaagcccttcatcggcacgcactac 1200
>dbj|AK069927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H23, full
insert sequence
Length = 1663
Score = 210 bits (106), Expect = 1e-051
Identities = 193/222 (86%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 777 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 836
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 837 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 896
Query: 712 cggggcagcgtcgacttcatcttcggcttcggccgcagcttctacgaggactgccgcatc 771
|| |||||||||||||||||||||||||||||| | | |||||| ||| ||| ||
Sbjct: 897 cgtggcagcgtcgacttcatcttcggcttcggcaggtccctctacgcggattgcacgatt 956
Query: 772 gagtcggtggtcaaggaggtggcggtgctgacggcgcagcag 813
||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 957 gagtcggtgacgaaggaggtggcggtggtgacggcgcagcag 998
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 1071 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 1130
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 1131 atgggcaaggaggttgtgccgatcggttgggacggctgg 1169
>dbj|AK099256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F17, full
insert sequence
Length = 1660
Score = 210 bits (106), Expect = 1e-051
Identities = 193/222 (86%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 774 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 833
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 834 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 893
Query: 712 cggggcagcgtcgacttcatcttcggcttcggccgcagcttctacgaggactgccgcatc 771
|| |||||||||||||||||||||||||||||| | | |||||| ||| ||| ||
Sbjct: 894 cgtggcagcgtcgacttcatcttcggcttcggcaggtccctctacgcggattgcacgatt 953
Query: 772 gagtcggtggtcaaggaggtggcggtgctgacggcgcagcag 813
||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 954 gagtcggtgacgaaggaggtggcggtggtgacggcgcagcag 995
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 1068 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 1127
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 1128 atgggcaaggaggttgtgccgatcggttgggacggctgg 1166
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 135323
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 23701 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 23760
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 23761 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 23820
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 23821 cgtggcagcgtcgacttcatcttcggcttcggc 23853
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 24661 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 24720
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 24721 atgggcaaggaggttgtgccgatcggttgggacggctgg 24759
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 24559 aaggaggtggcggtggtgacggcgcagcag 24588
>ref|NT_107150.1| Oryza sativa (japonica cultivar-group)
Length = 2060995
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Minus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 1666965 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 1666906
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 1666905 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 1666846
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 1666845 cgtggcagcgtcgacttcatcttcggcttcggc 1666813
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 1666005 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 1665946
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 1665945 atgggcaaggaggttgtgccgatcggttgggacggctgg 1665907
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 1666107 aaggaggtggcggtggtgacggcgcagcag 1666078
>gb|AACV01008210.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008210,
whole genome shotgun sequence
Length = 4088
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 790 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 849
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 850 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 909
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 910 cgtggcagcgtcgacttcatcttcggcttcggc 942
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 1750 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 1809
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 1810 atgggcaaggaggttgtgccgatcggttgggacggctgg 1848
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 1648 aaggaggtggcggtggtgacggcgcagcag 1677
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 8323576 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 8323635
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 8323636 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 8323695
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 8323696 cgtggcagcgtcgacttcatcttcggcttcggc 8323728
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 8324536 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 8324595
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 8324596 atgggcaaggaggttgtgccgatcggttgggacggctgg 8324634
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 8324434 aaggaggtggcggtggtgacggcgcagcag 8324463
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 35589739 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 35589798
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 35589799 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 35589858
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 35589859 cgtggcagcgtcgacttcatcttcggcttcggc 35589891
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 35590699 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 35590758
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 35590759 atgggcaaggaggttgtgccgatcggttgggacggctgg 35590797
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 35590597 aaggaggtggcggtggtgacggcgcagcag 35590626
Score = 46.1 bits (23), Expect = 0.048
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 843 caccggcttctcgttcaagaactgcagcatc 873
|||||||||||||||| || |||||||||||
Sbjct: 10269389 caccggcttctcgttccagtactgcagcatc 10269359
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Minus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 23154696 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 23154637
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 23154636 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 23154577
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 23154576 cgtggcagcgtcgacttcatcttcggcttcggc 23154544
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 23153736 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 23153677
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 23153676 atgggcaaggaggttgtgccgatcggttgggacggctgg 23153638
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 23153838 aaggaggtggcggtggtgacggcgcagcag 23153809
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 192 bits (97), Expect = 3e-046
Identities = 139/153 (90%)
Strand = Plus / Minus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| ||||||||| |||| | ||| ||||||||||||||||||
Sbjct: 23082887 caggcggtggcgctgcgggtgttcgggagcaaggtggcgatgtacaactgcaccatcgac 23082828
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 23082827 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 23082768
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| ||||||||||||||||||||||||||||||
Sbjct: 23082767 cgtggcagcgtcgacttcatcttcggcttcggc 23082735
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 23081927 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 23081868
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 23081867 atgggcaaggaggttgtgccgatcggttgggacggctgg 23081829
Score = 52.0 bits (26), Expect = 8e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 784 aaggaggtggcggtgctgacggcgcagcag 813
||||||||||||||| ||||||||||||||
Sbjct: 23082029 aaggaggtggcggtggtgacggcgcagcag 23082000
>gb|C71877.1|C71877 C71877 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0514_1A, mRNA sequence
Length = 462
Score = 174 bits (88), Expect = 8e-041
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 592 caggcggtggcggtgcggctgttcgggaccaagacgcagatctacaactgcaccatcgac 651
|||||||||||| ||||| | ||||| | |||| | ||| ||||||||||||||||||
Sbjct: 61 caggcggtggcgctgcgggtnttcggnagcaaggtggcgatgtacaactgcaccatcgac 120
Query: 652 ggcggacaggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatc 711
||||| ||||||||||||||||||||||||||||| || ||||||||| ||||||||||
Sbjct: 121 ggcgggcaggacacgctgtacgaccacaagggcctccattacttcaagaactgcctcatc 180
Query: 712 cggggcagcgtcgacttcatcttcggcttcggc 744
|| |||||| |||||||||||||||||||||||
Sbjct: 181 cgtggcagcntcgacttcatcttcggcttcggc 213
>gb|C98861.1|C98861 C98861 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3191_1A, mRNA sequence
Length = 452
Score = 141 bits (71), Expect = 1e-030
Identities = 255/314 (81%), Gaps = 13/314 (4%)
Strand = Plus / Plus
Query: 824 ccatcgagggcgccatcgacaccggcttctcgttcaagaactgcagcatcggcggcgtca 883
|||||||||||||||| || | |||||||| |||||||||||||||||| | | ||
Sbjct: 4 ccatcgagggcgccatagaaagtggcttctccttcaagaactgcagcatcaaag--gaca 61
Query: 884 agggcggacagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgt 943
||||| |||||||||| ||||| || |||||||| || || |||||||| ||||| |
Sbjct: 62 agggc----agatctacctcggccgggcatggggggattcgtcgcgggtggtgtactcct 117
Query: 944 acacgaagatgggggaggaggtggtccccgtgggttgggacggctggcagatcgccaagc 1003
||||| | ||| |||||||||| || | | ||||| |||||| | ||||||||||
Sbjct: 118 acacggacatgtccaaggaggtggtgccgataaggtgggatggctggaacatcgccaagc 177
Query: 1004 cggagagcagcggcatctactacggcgagttcaagtgctttggccccggcgctgacgcca 1063
||||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||
Sbjct: 178 cggagagcagcgggatctactacggcgagttcaagtgcaccggccccggctccgacgcc- 236
Query: 1064 agaagaagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaagccattcg 1123
|||||||||||||| |||||||| |||||||||| || || |||||||| |||
Sbjct: 237 -----aagaagagggtgggttgggcgcttgacctcaccgcggatcaagccaagcc-ttca 290
Query: 1124 tcggcacacactac 1137
||||||| ||||||
Sbjct: 291 tcggcacgcactac 304
>gb|C71815.1|C71815 C71815 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0389_1A, mRNA sequence
Length = 416
Score = 113 bits (57), Expect = 2e-022
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 631 atctacaactgcaccatcgacggcggacaggacacgctgtacgaccacaagggcctgcac 690
|||||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||
Sbjct: 7 atctacaactgcaccatcgacggcgggcaggacaccctatacgatcacaagggactccac 66
Query: 691 tacttcaagggctgcctcatccggggcagcgtcgacttcatcttcggcttcgg 743
||| |||||| |||||||| ||||||||||||||||||||| || |||||
Sbjct: 67 tacatcaaggatagcctcatcatgggcagcgtcgacttcatctttggattcgg 119
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 783 caaggaggtggcggtgctgacggcgcagcagcgttccaagtccatcgagggcgccatcga 842
|||||||||| | |||||||||||||| || | ||||| |||||||||||||||| ||
Sbjct: 159 caaggaggtgtccgtgctgacggcgcan-agaggaccaagaccatcgagggcgccataga 217
Query: 843 caccggcttctcgttcaagaactgcagcatc 873
| |||||||| ||||||||||||||||||
Sbjct: 218 aagtggcttctccttcaagaactgcagcatc 248
Score = 50.1 bits (25), Expect = 0.003
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacg 948
||||||||||| ||||| || |||||||| || || |||||||| ||||| ||||||
Sbjct: 261 cagatctacctcggccgggcatggggggattcgtcgcgggtggtgtactcctacacg 317
>gb|C72529.1|C72529 C72529 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1785_1A, mRNA sequence
Length = 427
Score = 95.6 bits (48), Expect = 6e-017
Identities = 207/260 (79%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 104 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 163
Query: 376 ctgaacatcagcaagccgttcatcacgttccggtcggaccccaagaagcccgccgtcgtg 435
|| ||||||| ||||| | |||||| ||| ||| ||||| || || || || |
Sbjct: 164 ctcaacatcactaagccctacatcaccttcaagtccgaccctgccaacccggcggtgatc 223
Query: 436 gtctggaacgacactgcggccacgaacggcaaggacggtaagccggtgggcacggtgggg 495
| ||||||||||| || ||||| | ||||||||||| ||||| || ||||| || |||
Sbjct: 224 gcctggaacgacatggctgccaccaggggcaaggacggcaagcccgtcggcaccgtcggg 283
Query: 496 agcgccacgctggcggtggagtcggactacttcacggcgtacggcgtggtgttccggaac 555
||| |||| | || || ||||| |||||||||| ||| |||||||| || ||| ||||
Sbjct: 284 agcaccaccgtcgccgtcgagtccgactacttcatggcctacggcgtcgtcttcaagaac 343
Query: 556 gacgcgccgctggccaagcc 575
||||||||| ||||||||||
Sbjct: 344 gacgcgccgttggccaagcc 363
>gb|C98676.1|C98676 C98676 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1195_2A, mRNA sequence
Length = 415
Score = 67.9 bits (34), Expect = 1e-008
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 316 aacaccaagcgcgtgatcctggatctcaagcccggcgctcagttccgcgagaagctgttc 375
|||||||||||||| ||||| || |||||||||||||| ||||||| |||||||| ||
Sbjct: 212 aacaccaagcgcgtcatcctcgacctcaagcccggcgccgagttccgggagaagctcctc 271
Query: 376 ctgaacatca 385
|| |||||||
Sbjct: 272 ctcaacatca 281
>gb|AU093907.1|AU093907 AU093907 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1195, mRNA sequence
Length = 701
Score = 61.9 bits (31), Expect = 8e-007
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1069 aagaagagggtggggtgggcgctggacctcaccgaggcgcaggccaagccattcgtcggc 1128
||||||||| |||| |||||||| ||||| |||| || ||||||||||| ||| |||||
Sbjct: 29 aagaagaggntgggttgggcgcttgacctnaccgcggatcaggccaagcctttcatcggc 88
Query: 1129 acacactac 1137
|| ||||||
Sbjct: 89 acgcactac 97
>gb|AU163637.1|AU163637 AU163637 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3266, mRNA sequence
Length = 451
Score = 61.9 bits (31), Expect = 8e-007
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 892 cagatctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaag 951
|||||||||||||| || || ||||| ||||| ||||||||||| ||||| ||||| |
Sbjct: 87 cagatctacctggggcgggcatggggtgactcgtcccgggtggtttactcctacaccacc 146
Query: 952 atgggggaggaggtggtccccgtgggttgggacggctgg 990
||||| ||||||| || || | |||||||||||||||
Sbjct: 147 atgggcaaggaggttgtgccgatcggttgggacggctgg 185
>dbj|AP003821.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1308_C12,
*** SEQUENCING IN PROGRESS ***
Length = 99427
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 82182 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 82123
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 82122 ggcgtcgacttcatcttcggct 82101
>gb|AACV01016945.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016945,
whole genome shotgun sequence
Length = 6839
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 807 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 748
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 747 ggcgtcgacttcatcttcggct 726
>ref|XM_479388.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 888
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 535 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 594
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 595 ggcgtcgacttcatcttcggct 616
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0018C07
Length = 141707
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 81448 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 81507
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 81508 ggcgtcgacttcatcttcggct 81529
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 15130482 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 15130541
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 15130542 ggcgtcgacttcatcttcggct 15130563
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 13070051 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 13070110
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 13070111 ggcgtcgacttcatcttcggct 13070132
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 26469490 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 26469549
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 26469550 ggcgtcgacttcatcttcggct 26469571
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 60.0 bits (30), Expect = 3e-006
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||||||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 27517477 caggacacgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 27517536
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 27517537 ggcgtcgacttcatcttcggct 27517558
>dbj|AK119935.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A11, full
insert sequence
Length = 1012
Score = 52.0 bits (26), Expect = 8e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagggctgcctcatccggggc 717
||||||| ||||| ||||| |||||||| ||||||||| | |||| | || |||||
Sbjct: 575 caggacatgctgtgcgacctcaagggccgccactacttccaccactgctacgtcaggggc 634
Query: 718 agcgtcgacttcatcttcggct 739
|||||||||||||||||||||
Sbjct: 635 ggcgtcgacttcatcttcggct 656
>gb|AU093789.1|AU093789 AU093789 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0514, mRNA sequence
Length = 736
Score = 48.1 bits (24), Expect = 0.012
Identities = 78/96 (81%)
Strand = Plus / Plus
Query: 895 atctacctgggccgcgcctggggggactcctcccgggtggtctactcgtacacgaagatg 954
|||||| ||||||| || |||| ||||| ||||||||||| ||||| ||||| | |||
Sbjct: 79 atctacttgggccgggcatgggttgactcgtcccgggtggtttactcctacaccaccatg 138
Query: 955 ggggaggaggtggtccccgtgggttgggacggctgg 990
|| ||||||| || || | |||||||||||||||
Sbjct: 139 ggcaaggaggttgtgccgatcggttgggacggctgg 174
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 46.1 bits (23), Expect = 0.048
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 216 gtcggaggcggagaagaagaagg 238
|||||||||||||||||||||||
Sbjct: 1160 gtcggaggcggagaagaagaagg 1138
>dbj|AK073604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033049L01, full
insert sequence
Length = 1347
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 747 caggacacgctgtacgatcactcgggccggcactactacaagg 789
>dbj|AK105996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H06, full
insert sequence
Length = 1346
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 751 caggacacgctgtacgatcactcgggccggcactactacaagg 793
>dbj|AK109798.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E11, full
insert sequence
Length = 1399
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 751 caggacacgctgtacgatcactcgggccggcactactacaagg 793
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
complete sequence
Length = 177327
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 563 cgctggccaagcccggcgccaagggcg 589
|||||||||||||||||| ||||||||
Sbjct: 158609 cgctggccaagcccggcggcaagggcg 158583
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0083G16, complete sequence
Length = 145590
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 563 cgctggccaagcccggcgccaagggcg 589
|||||||||||||||||| ||||||||
Sbjct: 95477 cgctggccaagcccggcggcaagggcg 95503
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone
OSJNBb0027B12, from chromosome 3, complete sequence
Length = 127426
Score = 46.1 bits (23), Expect = 0.048
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 843 caccggcttctcgttcaagaactgcagcatc 873
|||||||||||||||| || |||||||||||
Sbjct: 80078 caccggcttctcgttccagtactgcagcatc 80048
>gb|AACV01002323.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002323, whole
genome shotgun sequence
Length = 17865
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 17726 caggacacgctgtacgatcactcgggccggcactactacaagg 17768
>gb|AACV01006387.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006387, whole
genome shotgun sequence
Length = 24822
Score = 46.1 bits (23), Expect = 0.048
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 843 caccggcttctcgttcaagaactgcagcatc 873
|||||||||||||||| || |||||||||||
Sbjct: 11762 caccggcttctcgttccagtactgcagcatc 11732
>gb|AACV01022372.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022372, whole
genome shotgun sequence
Length = 37361
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 563 cgctggccaagcccggcgccaagggcg 589
|||||||||||||||||| ||||||||
Sbjct: 33493 cgctggccaagcccggcggcaagggcg 33519
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 31131491 caggacacgctgtacgatcactcgggccggcactactacaagg 31131449
>ref|NM_191159.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1155
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 670 caggacacgctgtacgatcactcgggccggcactactacaagg 712
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 46.1 bits (23), Expect = 0.048
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 658 caggacacgctgtacgaccacaagggcctgcactacttcaagg 700
||||||||||||||||| ||| ||||| |||||||| |||||
Sbjct: 5578874 caggacacgctgtacgatcactcgggccggcactactacaagg 5578832
>ref|NT_079917.2| Oryza sativa (japonica cultivar-group)
Length = 2507935
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 563 cgctggccaagcccggcgccaagggcg 589
|||||||||||||||||| ||||||||
Sbjct: 1683180 cgctggccaagcccggcggcaagggcg 1683206
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,636,435
Number of Sequences: 438736
Number of extensions: 2636435
Number of successful extensions: 35082
Number of sequences better than 0.5: 66
Number of HSP's better than 0.5 without gapping: 69
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 33165
Number of HSP's gapped (non-prelim): 1869
length of query: 1310
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1289
effective length of database: 2,791,206,460
effective search space: 3597865126940
effective search space used: 3597865126940
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)