BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3099514.2.1
(547 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB638943.1|CB638943 OSJNEa07O22.r OSJNEa Oryza sativa (j... 165 3e-038
gb|CB642771.1|CB642771 OSJNEb03C02.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB645388.1|CB645388 OSJNEb07A08.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB645603.1|CB645603 OSJNEb07G15.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB647501.1|CB647501 OSJNEb10H08.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB647962.1|CB647962 OSJNEb11C02.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB651487.1|CB651487 OSJNEb16H11.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB653378.1|CB653378 OSJNEc04F18.r OSJNEc Oryza sativa (j... 165 3e-038
gb|CB662955.1|CB662955 OSJNEd07H01.r OSJNEd Oryza sativa (j... 165 3e-038
gb|CB663334.1|CB663334 OSJNEd08C15.r OSJNEd Oryza sativa (j... 165 3e-038
gb|CB668707.1|CB668707 OSJNEd16L02.r OSJNEd Oryza sativa (j... 165 3e-038
gb|CB673143.1|CB673143 OSJNEe07I16.r OSJNEe Oryza sativa (j... 165 3e-038
gb|CB673209.1|CB673209 OSJNEe07K03.r OSJNEe Oryza sativa (j... 165 3e-038
gb|CB682790.1|CB682790 OSJNEf10H11.r OSJNEf Oryza sativa (j... 165 3e-038
gb|CF317356.1|CF317356 HD--07-A08.g1 OsHDAC1-overexpressing... 165 3e-038
dbj|AK060797.1| Oryza sativa (japonica cultivar-group) cDNA... 165 3e-038
dbj|AK099406.1| Oryza sativa (japonica cultivar-group) cDNA... 165 3e-038
dbj|AK102158.1| Oryza sativa (japonica cultivar-group) cDNA... 165 3e-038
gb|CB641608.1|CB641608 OSJNEb01F10.r OSJNEb Oryza sativa (j... 157 8e-036
gb|CB641686.1|CB641686 OSJNEb01H10.r OSJNEb Oryza sativa (j... 157 8e-036
gb|CF309950.1|CF309950 ABF--04-F18.g1 ABF3-overexpressing t... 157 8e-036
gb|CB648735.1|CB648735 OSJNEb12E09.r OSJNEb Oryza sativa (j... 151 5e-034
gb|AC118671.1| Oryza sativa (japonica cultivar-group) chrom... 143 1e-031
gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbar... 143 1e-031
gb|AC121491.2| Oryza sativa (japonica cultivar-group) chrom... 143 1e-031
gb|AACV01006568.1| Oryza sativa (japonica cultivar-group) c... 143 1e-031
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 143 1e-031
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 143 1e-031
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 143 1e-031
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 143 1e-031
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 143 1e-031
gb|CG409006.1|CG409006 Ds700 Ds insertion lines Oryza sativ... 100 2e-018
emb|X59046.1|ORRSS2 O.sativa RSs2 gene for sucrose-UDP gluc... 78 6e-012
gb|C91893.1|C91893 C91893 Rice cDNA from immature leaf incl... 74 9e-011
gb|D15337.1|D15337 RICC0475A Rice callus Oryza sativa (japo... 74 9e-011
gb|D22589.1|D22589 RICC0450A Rice callus Oryza sativa (japo... 74 9e-011
gb|C97998.1|C97998 C97998 Rice callus Oryza sativa (japonic... 74 9e-011
gb|C99265.1|C99265 C99265 Rice panicle at ripening stage Or... 74 9e-011
gb|AU095995.1|AU095995 AU095995 Rice green shoot Oryza sati... 74 9e-011
gb|AU096565.1|AU096565 AU096565 Rice green shoot Oryza sati... 74 9e-011
gb|AU225563.1|AU225563 AU225563 Oryza sativa Koshihikari pi... 74 9e-011
gb|CB651066.1|CB651066 OSJNEb15O01.r OSJNEb Oryza sativa (j... 74 9e-011
gb|CB659696.1|CB659696 OSJNEc16O08.r OSJNEc Oryza sativa (j... 74 9e-011
gb|CB677913.1|CB677913 OSJNEe15F18.r OSJNEe Oryza sativa (j... 74 9e-011
gb|CV720594.1|CV720594 YBH--01-C16.b1 Rice before heading y... 74 9e-011
dbj|AK061713.1| Oryza sativa (japonica cultivar-group) cDNA... 74 9e-011
dbj|AK100306.1| Oryza sativa (japonica cultivar-group) cDNA... 74 9e-011
dbj|AK100334.1| Oryza sativa (japonica cultivar-group) cDNA... 74 9e-011
ref|NM_184941.1| Oryza sativa (japonica cultivar-group), mRNA 74 9e-011
ref|NM_189807.2| Oryza sativa (japonica cultivar-group), mRNA 74 9e-011
gb|AACV01006837.1| Oryza sativa (japonica cultivar-group) c... 70 1e-009
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 70 1e-009
gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 ... 70 1e-009
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 70 1e-009
gb|D48211.1|D48211 RICS14309A Rice green shoot Oryza sativa... 68 5e-009
gb|CV733224.1|CV733224 FLO--08-A16.g1 Rice flower lambda ph... 66 2e-008
dbj|AK119198.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
gb|CB643386.1|CB643386 OSJNEb04A22.r OSJNEb Oryza sativa (j... 64 8e-008
gb|L03366.1|RICRSS3 Oryza sativa sucrose synthase 3 (RSs3) ... 64 8e-008
dbj|AP004308.3| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
dbj|AP004988.3| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
gb|AACV01016794.1| Oryza sativa (japonica cultivar-group) c... 64 8e-008
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 64 8e-008
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 64 8e-008
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 8e-008
gb|C74903.1|C74903 C74903 Rice cDNA from immature leaf incl... 56 2e-005
gb|D24133.1|D24133 RICR1410A Rice root Oryza sativa (japoni... 50 0.001
gb|AU094024.1|AU094024 AU094024 Rice panicle at flowering s... 50 0.001
gb|AU102041.1|AU102041 AU102041 Rice shoot Oryza sativa (ja... 50 0.001
gb|AU102042.1|AU102042 AU102042 Rice shoot Oryza sativa (ja... 50 0.001
gb|AU174192.1|AU174192 AU174192 Rice shoot Oryza sativa (ja... 50 0.001
gb|AU175062.1|AU175062 AU175062 Rice panicle at flowering s... 50 0.001
gb|AU184152.1|AU184152 AU184152 Rice root Oryza sativa (jap... 50 0.001
gb|AU184270.1|AU184270 AU184270 Rice root Oryza sativa (jap... 50 0.001
gb|CA755423.1|CA755423 BR030020000_PLATE_C09_67_069.ab1 OA ... 50 0.001
gb|CB646528.1|CB646528 OSJNEb09B04.r OSJNEb Oryza sativa (j... 50 0.001
gb|CB656070.1|CB656070 OSJNEc09P21.r OSJNEc Oryza sativa (j... 50 0.001
gb|CB674046.1|CB674046 OSJNEe08O14.r OSJNEe Oryza sativa (j... 50 0.001
gb|CB677532.1|CB677532 OSJNEe14J02.f OSJNEe Oryza sativa (j... 50 0.001
gb|CB683227.1|CB683227 OSJNEf11F09.r OSJNEf Oryza sativa (j... 50 0.001
gb|CV721383.1|CV721383 YBH--03-O17.b1 Rice before heading y... 50 0.001
gb|CV722961.1|CV722961 root--02-B18.g1 Rice root lambda pha... 50 0.001
gb|AU312000.1|AU312000 AU312000 Oryza sativa anther cDNA Or... 50 0.001
dbj|AK072074.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK098923.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK100546.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK119193.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AU108275.1|AU108275 AU108275 Rice callus Oryza sativa (j... 42 0.31
gb|AACV01020399.1| Oryza sativa (japonica cultivar-group) c... 42 0.31
dbj|AP007254.2| Oryza sativa (japonica cultivar-group) geno... 42 0.31
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.31
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.31
>gb|CB638943.1|CB638943 OSJNEa07O22.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa07O22 3', mRNA sequence
Length = 638
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 401 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 342
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 341 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 282
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 281 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 231
>gb|CB642771.1|CB642771 OSJNEb03C02.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03C02 3', mRNA sequence
Length = 845
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 472 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 413
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 412 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 353
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 352 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 302
>gb|CB645388.1|CB645388 OSJNEb07A08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07A08 3', mRNA sequence
Length = 810
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 402 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 343
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 342 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 283
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 282 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 232
>gb|CB645603.1|CB645603 OSJNEb07G15.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07G15 3', mRNA sequence
Length = 859
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 474 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 415
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 414 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 355
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 354 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 304
>gb|CB647501.1|CB647501 OSJNEb10H08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10H08 3', mRNA sequence
Length = 675
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 478 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 419
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 418 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 359
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 358 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 308
>gb|CB647962.1|CB647962 OSJNEb11C02.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11C02 3', mRNA sequence
Length = 768
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 432 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 373
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 372 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 313
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 312 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 262
>gb|CB651487.1|CB651487 OSJNEb16H11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16H11 3', mRNA sequence
Length = 757
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 454 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 395
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 394 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 335
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 334 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 284
>gb|CB653378.1|CB653378 OSJNEc04F18.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04F18 3', mRNA sequence
Length = 811
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 452 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 393
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 392 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 333
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 332 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 282
>gb|CB662955.1|CB662955 OSJNEd07H01.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H01 3', mRNA sequence
Length = 881
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 510 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 451
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 450 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 391
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 390 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 340
>gb|CB663334.1|CB663334 OSJNEd08C15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08C15 3', mRNA sequence
Length = 823
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 402 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 343
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 342 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 283
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 282 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 232
>gb|CB668707.1|CB668707 OSJNEd16L02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16L02 3', mRNA sequence
Length = 755
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 449 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 390
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 389 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 330
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 329 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 279
>gb|CB673143.1|CB673143 OSJNEe07I16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07I16 3', mRNA sequence
Length = 786
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 409 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 350
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 349 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 290
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 289 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 239
>gb|CB673209.1|CB673209 OSJNEe07K03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07K03 3', mRNA sequence
Length = 760
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 395 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 336
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 335 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 276
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 275 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 225
>gb|CB682790.1|CB682790 OSJNEf10H11.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10H11 3', mRNA sequence
Length = 817
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 410 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 351
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 350 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 291
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 290 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 240
>gb|CF317356.1|CF317356 HD--07-A08.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-A08, mRNA sequence
Length = 611
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 417 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 358
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 357 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 298
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 297 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 247
>dbj|AK060797.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F01, full
insert sequence
Length = 1082
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Plus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 651 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 710
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 711 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 770
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 771 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 821
>dbj|AK099406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M19, full
insert sequence
Length = 2716
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Plus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 2293 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 2352
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 2353 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 2412
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 2413 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 2463
>dbj|AK102158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086F24, full
insert sequence
Length = 2763
Score = 165 bits (83), Expect = 3e-038
Identities = 149/171 (87%)
Strand = Plus / Plus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 2294 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 2353
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 2354 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 2413
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 2414 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 2464
>gb|CB641608.1|CB641608 OSJNEb01F10.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01F10 3', mRNA sequence
Length = 697
Score = 157 bits (79), Expect = 8e-036
Identities = 148/171 (86%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 457 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 398
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 397 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 338
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
||||| |||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 337 atgttttacatattgaagttccgtgaactggcgaagactgtacctcttgca 287
>gb|CB641686.1|CB641686 OSJNEb01H10.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01H10 3', mRNA sequence
Length = 732
Score = 157 bits (79), Expect = 8e-036
Identities = 148/171 (86%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| | ||| ||||||||||||| | |||| |||||
Sbjct: 466 atatatgagaaatatacatggaagatctcctctgagaggttgatgacattggctggggtt 407
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 406 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 347
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
|||||||||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 346 atgttctacatattgaagttccgtgaactggcgaagactgtacctcttgca 296
>gb|CF309950.1|CF309950 ABF--04-F18.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-F18, mRNA sequence
Length = 487
Score = 157 bits (79), Expect = 8e-036
Identities = 148/171 (86%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| ||||||||||||| | |||| |||||
Sbjct: 451 atatatgagaaatatacatggaagatctactctgagaggttgatgacattggctggggtt 392
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 391 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 332
Query: 173 atgttctacatactgaagttccgcgagctggcgaagaccgtgccgcttgca 223
||||| |||||| |||||||||| || ||||||||||| || || ||||||
Sbjct: 331 atgttttacatattgaagttccgtgaactggcgaagactgtacctcttgca 281
>gb|CB648735.1|CB648735 OSJNEb12E09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12E09 3', mRNA sequence
Length = 802
Score = 151 bits (76), Expect = 5e-034
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 53 atatacgagaagtacacatggaagatatactcagagaggttgatgatactggccggggtc 112
||||| ||||| || ||||||||||| ||||| |||||||||||| | |||| |||||
Sbjct: 429 atatatgagaaatatacatggaagatctactctgagaggttgatgccattggctggggtt 370
Query: 113 tacggtttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgag 172
|| || ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 369 tatggcttctggaagtatgtctcgaagcttgagaggcgggagaccaggcgctatcttgag 310
Query: 173 atgttctacatactgaagttccgcgagctggcgaag 208
|||||||||||| |||||||||| || |||||||||
Sbjct: 309 atgttctacatattgaagttccgtgaactggcgaag 274
>gb|AC118671.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0050D18, *** SEQUENCING IN PROGRESS ***, 10
unordered pieces
Length = 117605
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 46733 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 46674
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 46673 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 46614
Query: 188 aagttccg 195
||||||||
Sbjct: 46613 aagttccg 46606
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0030D15, from chromosome 3, complete sequence
Length = 151972
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 27006 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 27065
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 27066 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 27125
Query: 188 aagttccg 195
||||||||
Sbjct: 27126 aagttccg 27133
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBb0050D18, complete sequence
Length = 126350
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 4436 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 4377
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 4376 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 4317
Query: 188 aagttccg 195
||||||||
Sbjct: 4316 aagttccg 4309
>gb|AACV01006568.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006568, whole
genome shotgun sequence
Length = 110919
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 58890 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 58831
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 58830 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 58771
Query: 188 aagttccg 195
||||||||
Sbjct: 58770 aagttccg 58763
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 3992243 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 3992184
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 3992183 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 3992124
Query: 188 aagttccg 195
||||||||
Sbjct: 3992123 aagttccg 3992116
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 12737609 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 12737550
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 12737549 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 12737490
Query: 188 aagttccg 195
||||||||
Sbjct: 12737489 aagttccg 12737482
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 12929971 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 12929912
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 12929911 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 12929852
Query: 188 aagttccg 195
||||||||
Sbjct: 12929851 aagttccg 12929844
Score = 69.9 bits (35), Expect = 1e-009
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 65 tacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctgg 124
||||| |||||| | ||||| |||||| |||||| || |||| |||||||| ||||||
Sbjct: 16751444 tacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctgg 16751385
Query: 125 aagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 16751384 aagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 16751334
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 12646746 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 12646687
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 12646686 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 12646627
Query: 188 aagttccg 195
||||||||
Sbjct: 12646626 aagttccg 12646619
Score = 69.9 bits (35), Expect = 1e-009
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 65 tacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctgg 124
||||| |||||| | ||||| |||||| |||||| || |||| |||||||| ||||||
Sbjct: 16134607 tacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctgg 16134548
Query: 125 aagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 16134547 aagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 16134497
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 143 bits (72), Expect = 1e-031
Identities = 114/128 (89%)
Strand = Plus / Minus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 12649983 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 12649924
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatgttctacatactg 187
|| || |||||||| |||||||||||||| |||||||| |||||||||||||||||| ||
Sbjct: 12649923 tatgtctcgaagcttgagaggcgggagaccaggcgctatcttgagatgttctacatattg 12649864
Query: 188 aagttccg 195
||||||||
Sbjct: 12649863 aagttccg 12649856
Score = 69.9 bits (35), Expect = 1e-009
Identities = 92/111 (82%)
Strand = Plus / Minus
Query: 65 tacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctgg 124
||||| |||||| | ||||| |||||| |||||| || |||| |||||||| ||||||
Sbjct: 16140074 tacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctgg 16140015
Query: 125 aagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 16140014 aagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 16139964
>gb|CG409006.1|CG409006 Ds700 Ds insertion lines Oryza sativa (japonica cultivar-group)
genomic, DNA sequence
Length = 470
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 68 acatggaagatatactcagagaggttgatgatactggccggggtctacggtttctggaag 127
||||||||||| ||||| ||||||||||||| | |||| ||||| || || |||||||||
Sbjct: 372 acatggaagatctactctgagaggttgatgacattggctggggtttatggcttctggaag 431
Query: 128 tacgtgtcgaagctcgagaggcgggagacgaggcgcta 165
|| || |||||||| |||||||||||||| ||||||||
Sbjct: 432 tatgtctcgaagcttgagaggcgggagaccaggcgcta 469
>emb|X59046.1|ORRSS2 O.sativa RSs2 gene for sucrose-UDP glucosyltransferase (isozyme 2)
Length = 9225
Score = 77.8 bits (39), Expect = 6e-012
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 65 tacacatggaagatatactcagagaggttgatgatactggccggggtctacggtttctgg 124
||||| |||||| | ||||| |||||| |||||| ||| |||| |||||||| ||||||
Sbjct: 6828 tacacctggaagctctactctgagaggctgatgaccctgaccggcgtctacggattctgg 6887
Query: 125 aagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 6888 aagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 6938
>gb|C91893.1|C91893 C91893 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E61816_1A,
mRNA sequence
Length = 629
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 183 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 242
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 243 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 299
>gb|D15337.1|D15337 RICC0475A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0475A, mRNA sequence
Length = 470
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 172 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 231
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 232 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 288
>gb|D22589.1|D22589 RICC0450A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0450_1A, mRNA sequence
Length = 354
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 53 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 112
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 113 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 169
>gb|C97998.1|C97998 C97998 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0352_8Z, mRNA sequence
Length = 697
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 190 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 249
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 250 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 306
>gb|C99265.1|C99265 C99265 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10554_6Z, mRNA sequence
Length = 713
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
|||||||||||||||||| | ||||| |||||| |||||| || |||| |||||||||
Sbjct: 278 gagaagtacacatggaagctctactctgagaggctgatgactctctccggtgtctacggt 337
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
||||||||||| || | || ||||| ||||| ||||| | |||||||| ||||||
Sbjct: 338 ttctggaagtatgtcaccaacctcgacaggcgtgagacacgccgctacctggagatg 394
>gb|AU095995.1|AU095995 AU095995 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11835, mRNA sequence
Length = 717
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 152 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 211
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 212 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 268
>gb|AU096565.1|AU096565 AU096565 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14309, mRNA sequence
Length = 679
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 147 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 206
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 207 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 263
>gb|AU225563.1|AU225563 AU225563 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0531, mRNA sequence
Length = 478
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 226 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 285
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 286 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 342
>gb|CB651066.1|CB651066 OSJNEb15O01.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15O01 3', mRNA sequence
Length = 778
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 366 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 307
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 306 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 250
>gb|CB659696.1|CB659696 OSJNEc16O08.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16O08 3', mRNA sequence
Length = 841
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 530 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 471
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 470 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 414
>gb|CB677913.1|CB677913 OSJNEe15F18.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F18 3', mRNA sequence
Length = 769
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 523 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 464
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 463 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 407
>gb|CV720594.1|CV720594 YBH--01-C16.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-C16, mRNA sequence
Length = 452
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 254 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 313
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 314 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 370
>dbj|AK061713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G10, full
insert sequence
Length = 1279
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 759 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 818
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 819 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 875
>dbj|AK100306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078G01, full
insert sequence
Length = 2771
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
|||||||||||||||||| | ||||| |||||| |||||| || |||| |||||||||
Sbjct: 2352 gagaagtacacatggaagctctactctgagaggctgatgactctctccggtgtctacggt 2411
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
||||||||||| || | || ||||| ||||| ||||| | |||||||| ||||||
Sbjct: 2412 ttctggaagtatgtcaccaacctcgacaggcgtgagacacgccgctacctggagatg 2468
>dbj|AK100334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P07, full
insert sequence
Length = 2910
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 2295 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 2354
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 2355 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 2411
>ref|NM_184941.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5850
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
||||| ||||| |||||| | ||||| |||||| |||||| || |||| ||||||||
Sbjct: 3474 gagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacgga 3533
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
|||||||||||||| ||||| || |||||||| || || | |||||||||||||||
Sbjct: 3534 ttctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatg 3590
>ref|NM_189807.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 2771
Score = 73.8 bits (37), Expect = 9e-011
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 59 gagaagtacacatggaagatatactcagagaggttgatgatactggccggggtctacggt 118
|||||||||||||||||| | ||||| |||||| |||||| || |||| |||||||||
Sbjct: 2352 gagaagtacacatggaagctctactctgagaggctgatgactctctccggtgtctacggt 2411
Query: 119 ttctggaagtacgtgtcgaagctcgagaggcgggagacgaggcgctaccttgagatg 175
||||||||||| || | || ||||| ||||| ||||| | |||||||| ||||||
Sbjct: 2412 ttctggaagtatgtcaccaacctcgacaggcgtgagacacgccgctacctggagatg 2468
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 659,519
Number of Sequences: 438736
Number of extensions: 659519
Number of successful extensions: 13937
Number of sequences better than 0.5: 93
Number of HSP's better than 0.5 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13427
Number of HSP's gapped (non-prelim): 489
length of query: 547
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 526
effective length of database: 2,791,206,460
effective search space: 1468174597960
effective search space used: 1468174597960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)