BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012873.2.2
(1520 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA... 1142 0.0
dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA... 1142 0.0
ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA 1142 0.0
ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-... 1142 0.0
ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-... 1142 0.0
dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA... 1134 0.0
dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA... 829 0.0
dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA... 813 0.0
dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA... 755 0.0
gb|CB679593.1|CB679593 OSJNEf03E14.f OSJNEf Oryza sativa (j... 698 0.0
gb|CB660333.1|CB660333 OSJNEd01P10.f OSJNEd Oryza sativa (j... 674 0.0
dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR ... 502 e-139
gb|CB660334.1|CB660334 OSJNEd01P10.r OSJNEd Oryza sativa (j... 387 e-104
gb|D46598.1|D46598 RICS11367A Rice green shoot Oryza sativa... 379 e-102
gb|CB678909.1|CB678909 OSJNEf01L21.f OSJNEf Oryza sativa (j... 373 e-100
dbj|AP003890.1| Oryza sativa (japonica cultivar-group) chro... 365 5e-098
dbj|AP004703.3| Oryza sativa (japonica cultivar-group) geno... 365 5e-098
gb|AACV01018567.1| Oryza sativa (japonica cultivar-group) c... 365 5e-098
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 365 5e-098
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 365 5e-098
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 365 5e-098
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 365 5e-098
gb|C72834.1|C72834 C72834 Rice panicle at flowering stage O... 287 9e-075
gb|AU163559.1|AU163559 AU163559 Rice panicle at flowering s... 278 8e-072
gb|AU086004.1|AU086004 AU086004 Rice green shoot Oryza sati... 270 2e-069
gb|CB647116.1|CB647116 OSJNEb09O10.f OSJNEb Oryza sativa (j... 270 2e-069
dbj|AP005429.3| Oryza sativa (japonica cultivar-group) geno... 270 2e-069
dbj|AP005426.3| Oryza sativa (japonica cultivar-group) geno... 270 2e-069
gb|AACV01019998.1| Oryza sativa (japonica cultivar-group) c... 270 2e-069
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 270 2e-069
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 270 2e-069
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 270 2e-069
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 270 2e-069
gb|D46355.1|D46355 RICS10974A Rice green shoot Oryza sativa... 262 5e-067
gb|AU094766.1|AU094766 AU094766 Rice panicle shorter than 3... 246 3e-062
gb|D49081.2|D49081 RICS15730A Rice green shoot Oryza sativa... 244 1e-061
gb|AACV01018568.1| Oryza sativa (japonica cultivar-group) c... 242 5e-061
dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA... 238 7e-060
gb|AU197607.1|AU197607 AU197607 Rice root Oryza sativa (jap... 232 5e-058
gb|AU184158.1|AU184158 AU184158 Rice root Oryza sativa (jap... 226 3e-056
gb|AU063857.1|AU063857 AU063857 Rice panicle at flowering s... 216 3e-053
gb|C91739.1|C91739 C91739 Rice panicle shorter than 3cm Ory... 202 4e-049
gb|D47839.1|D47839 RICS13560A Rice green shoot Oryza sativa... 198 6e-048
gb|AU070341.1|AU070341 AU070341 Rice green shoot Oryza sati... 192 4e-046
gb|AU222675.1|AU222675 AU222675 Rice green shoot Oryza sati... 186 2e-044
gb|D40444.1|D40444 RICS2431A Rice shoot Oryza sativa (japon... 176 2e-041
gb|D40241.1|D40241 RICS2074A Rice shoot Oryza sativa (japon... 174 9e-041
gb|D24952.1|D24952 RICR2837A Rice root Oryza sativa (japoni... 163 3e-037
gb|AU064487.1|AU064487 AU064487 Rice panicle shorter than 3... 145 8e-032
gb|D46765.1|D46765 RICS11643A Rice green shoot Oryza sativa... 143 3e-031
dbj|AP005561.1| Oryza sativa (japonica cultivar-group) chro... 135 8e-029
dbj|AK100234.1| Oryza sativa (japonica cultivar-group) cDNA... 135 8e-029
ref|XM_450149.1| Oryza sativa (japonica cultivar-group), mRNA 135 8e-029
ref|NT_107076.1| Oryza sativa (japonica cultivar-group) 135 8e-029
dbj|AP005680.3| Oryza sativa (japonica cultivar-group) geno... 135 8e-029
dbj|AP004655.2| Oryza sativa (japonica cultivar-group) chro... 131 1e-027
dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA... 131 1e-027
dbj|AP005415.2| Oryza sativa (japonica cultivar-group) geno... 131 1e-027
ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA 131 1e-027
gb|AU069739.1|AU069739 AU069739 Rice panicle at flowering s... 107 2e-020
gb|AU101126.1|AU101126 AU101126 Rice panicle at flowering s... 107 2e-020
gb|AU174752.1|AU174752 AU174752 Rice cDNA from leaf Oryza s... 92 1e-015
gb|AACV01017860.1| Oryza sativa (japonica cultivar-group) c... 90 4e-015
dbj|AK107665.1| Oryza sativa (japonica cultivar-group) cDNA... 88 2e-014
dbj|AP005691.3| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|AACV01005633.1| Oryza sativa (japonica cultivar-group) c... 88 2e-014
ref|XM_468350.1| Oryza sativa (japonica cultivar-group), mRNA 88 2e-014
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 88 2e-014
dbj|AP005303.3| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 88 2e-014
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 88 2e-014
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 88 2e-014
gb|D23017.1|D23017 RICC2050A Rice callus Oryza sativa (japo... 82 1e-012
gb|AU093255.1|AU093255 AU093255 Rice callus Oryza sativa (j... 80 4e-012
gb|AU108764.1|AU108764 AU108764 Rice callus Oryza sativa (j... 80 4e-012
dbj|AK063935.1| Oryza sativa (japonica cultivar-group) cDNA... 80 4e-012
dbj|AK119257.1| Oryza sativa (japonica cultivar-group) cDNA... 80 4e-012
ref|XM_468348.1| Oryza sativa (japonica cultivar-group), mRNA 80 4e-012
ref|XM_507038.1| PREDICTED Oryza sativa (japonica cultivar-... 80 4e-012
gb|AU108816.1|AU108816 AU108816 Rice callus Oryza sativa (j... 74 2e-010
gb|C27088.1|C27088 C27088 Rice callus cDNA Oryza sativa (ja... 68 2e-008
gb|AU096067.1|AU096067 AU096067 Rice green shoot Oryza sati... 68 2e-008
dbj|AP004087.3| Oryza sativa (japonica cultivar-group) geno... 66 6e-008
gb|AACV01003485.1| Oryza sativa (japonica cultivar-group) c... 66 6e-008
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 66 6e-008
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 66 6e-008
gb|D24005.1|D24005 RICR0828A Rice root Oryza sativa (japoni... 64 2e-007
dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA... 62 9e-007
ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA 62 9e-007
gb|D24228.1|D24228 RICR1554A Rice root Oryza sativa (japoni... 60 4e-006
gb|CB647117.1|CB647117 OSJNEb09O10.r OSJNEb Oryza sativa (j... 60 4e-006
gb|AACV01005630.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01019116.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
ref|XM_468343.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
gb|CH401232.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|AACV01005631.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_468346.1| Oryza sativa (japonica cultivar-group), mRNA 58 1e-005
dbj|AK064401.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AP003996.3| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
dbj|AP004064.3| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
gb|AACV01005620.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
ref|XM_468316.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-005
dbj|AP005191.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|AACV01003355.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|C28380.1|C28380 C28380 Rice callus cDNA Oryza sativa (ja... 50 0.004
gb|D23965.1|D23965 RICR0680A Rice root Oryza sativa (japoni... 50 0.004
gb|AU070183.1|AU070183 AU070183 Rice root Oryza sativa (jap... 50 0.004
gb|AU164656.1|AU164656 AU164656 Rice root Oryza sativa (jap... 50 0.004
gb|D40184.1|D40184 RICS1972A Rice shoot Oryza sativa (japon... 46 0.056
gb|D22175.1|D22175 RICC10448A Rice callus Oryza sativa (jap... 46 0.056
gb|AU067974.1|AU067974 AU067974 Rice callus Oryza sativa (j... 46 0.056
gb|AU069349.1|AU069349 AU069349 Rice callus Oryza sativa (j... 46 0.056
gb|AU069566.1|AU069566 AU069566 Rice callus Oryza sativa (j... 46 0.056
gb|AU093494.1|AU093494 AU093494 Rice callus Oryza sativa (j... 46 0.056
gb|AU162706.1|AU162706 AU162706 Rice mature leaf Oryza sati... 46 0.056
gb|AU163616.1|AU163616 AU163616 Rice panicle at flowering s... 46 0.056
gb|AU181856.1|AU181856 AU181856 Rice callus (2001) Oryza sa... 46 0.056
gb|D15312.2|D15312 RICC0440A Rice callus Oryza sativa (japo... 46 0.056
gb|CB645627.1|CB645627 OSJNEb07H08.f OSJNEb Oryza sativa (j... 46 0.056
gb|CF280693.1|CF280693 14ETL--07-H12.b1 Rice etiolated leaf... 46 0.056
dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.056
gb|AACV01001386.1| Oryza sativa (japonica cultivar-group) c... 46 0.056
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.056
ref|NM_193168.1| Oryza sativa (japonica cultivar-group), p... 46 0.056
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 46 0.056
dbj|AP003370.3| Oryza sativa (japonica cultivar-group) geno... 46 0.056
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.056
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.056
gb|AU182147.1|AU182147 AU182147 Rice callus (2001) Oryza sa... 44 0.22
gb|AU197203.1|AU197203 AU197203 Rice callus (2001) Oryza sa... 44 0.22
gb|CA997966.1|CA997966 S234A1_G09 Rice cold stress germinat... 44 0.22
gb|CB000963.1|CB000963 S234F_D10 Rice cold stress germinati... 44 0.22
gb|AACV01000823.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01003089.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01012780.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
gb|AACV01012781.1| Oryza sativa (japonica cultivar-group) c... 44 0.22
ref|NM_189199.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NM_189387.1| Oryza sativa (japonica cultivar-group), p... 44 0.22
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 44 0.22
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 44 0.22
gb|AC134929.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
dbj|AP003578.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP003263.2| Oryza sativa (japonica cultivar-group) geno... 44 0.22
dbj|AP004365.3| Oryza sativa (japonica cultivar-group) geno... 44 0.22
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.22
gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC c... 44 0.22
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.22
>dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B20, full
insert sequence
Length = 1441
Score = 1142 bits (576), Expect = 0.0
Identities = 864/960 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 235 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 294
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 295 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 354
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 355 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 414
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 415 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 474
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 475 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 534
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 594
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 595 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 654
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 655 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 714
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 715 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 774
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 775 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 834
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 835 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 894
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| |||||||||| ||| ||| |||
Sbjct: 895 tcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccg 954
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 955 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1014
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1015 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1074
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1075 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1134
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1135 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1194
>dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A12, full
insert sequence
Length = 1423
Score = 1142 bits (576), Expect = 0.0
Identities = 864/960 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 234 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 293
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 294 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 353
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 354 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 413
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 414 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 473
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 474 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 533
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 593
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 594 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 653
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 654 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 713
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 714 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 773
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 774 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 833
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 834 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 893
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| |||||||||| ||| ||| |||
Sbjct: 894 tcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccg 953
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 954 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1013
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1014 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1073
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1074 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1133
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1134 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1193
>ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1423
Score = 1142 bits (576), Expect = 0.0
Identities = 864/960 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 234 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 293
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 294 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 353
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 354 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 413
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 414 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 473
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 474 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 533
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 593
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 594 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 653
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 654 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 713
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 714 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 773
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 774 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 833
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 834 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 893
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| |||||||||| ||| ||| |||
Sbjct: 894 tcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccg 953
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 954 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1013
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1014 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1073
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1074 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1133
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1134 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1193
>ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA
Length = 1441
Score = 1142 bits (576), Expect = 0.0
Identities = 864/960 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 235 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 294
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 295 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 354
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 355 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 414
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 415 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 474
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 475 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 534
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 594
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 595 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 654
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 655 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 714
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 715 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 774
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 775 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 834
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 835 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 894
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| |||||||||| ||| ||| |||
Sbjct: 895 tcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccg 954
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 955 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1014
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1015 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1074
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1075 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1134
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1135 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1194
>ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA
Length = 1439
Score = 1142 bits (576), Expect = 0.0
Identities = 864/960 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 235 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 294
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 295 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 354
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 355 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 414
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 415 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 474
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 475 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 534
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 594
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 595 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 654
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 655 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 714
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 715 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 774
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 775 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 834
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 835 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 894
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| |||||||||| ||| ||| |||
Sbjct: 895 tcgacgtccgcgacgtcgccgccgcccacctcctcgtcttcgagtccccttccgccgccg 954
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 955 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1014
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1015 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1074
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1075 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1134
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1135 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1194
>dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A12, full
insert sequence
Length = 1439
Score = 1134 bits (572), Expect = 0.0
Identities = 863/960 (89%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 235 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 294
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 295 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 354
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 355 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 414
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || |||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 415 ccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtcttcc 474
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || |
Sbjct: 475 acaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgaggggga 534
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 594
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 595 cgtcgatcggggcggtgaccatggaccccaaccgcgggcccgacgtcgtcgtcgacgagt 654
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||| || | |||| || ||||||||||||||||||||||||| ||||
Sbjct: 655 cctgctggagcgaccttgactactgcaaggaaaccaggaactggtactgctacgggaagg 714
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||||||||| |||||||||||| |||| |||||||| || ||||| ||||||||||
Sbjct: 715 cggtggcggagcaggcggcgtgggaggcggcgcggcggcgaggggtggagctggtggtgg 774
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
||||||| ||||||||| | || || ||||||||| ||||||||||||||||| |||| |
Sbjct: 775 tgaacccggtgctggtgatcgggccgctgctgcagccgacggtgaacgccagcgtcgccc 834
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 835 acatcctcaagtacctggacggctcggccagcaagttcgccaacgccgtccaggcctacg 894
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccg 1005
| ||||| |||||||| |||| ||| ||||||| ||||||||| ||| ||| |||
Sbjct: 895 tcgacgtccgcgacgtcgccgccgcccacctccttgtcttcgagtccccttccgccgccg 954
Query: 1006 gccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcca 1065
||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 955 gccgcttcctctgcgccgagtctgtcctccaccgcgagggtgtcgtccgcatcctcgcca 1014
Query: 1066 agctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagc 1125
||||||||||||||||||| ||||| ||||||||||||||||| ||| || ||||||
Sbjct: 1015 agctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagc 1074
Query: 1126 agccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtca 1185
||||||||||| | || ||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1075 agccgtacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcga 1134
Query: 1186 gccagtcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgctcg 1245
|||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 1135 gccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctgccggtgctcg 1194
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full
insert sequence
Length = 1245
Score = 829 bits (418), Expect = 0.0
Identities = 819/950 (86%), Gaps = 2/950 (0%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 107 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 166
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 167 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 226
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 227 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcctctgcaagg 286
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || ||||||||| ||||| || |||||| | |||||||| ||||| ||||
Sbjct: 287 ccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgtgttcc 346
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 347 acaccgcctcccccgtcaccgatgaccctgagcagatggtggagccggcggtgcggggga 406
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 407 cggagtacgtgataaaggcggcggcggaggccggcacggtgcgccgggtggtgttcacgt 466
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||
Sbjct: 467 cgtccatcggcgccgtcaccatggaccccaaccgcggccccgacgtggtcgtcgacgagt 526
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 527 cctgctggagcgacctcgagttctgcaagaaaaccaagaactggtactgctacggtaagg 586
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||| ||||| | |||||| || ||||| ||| ||||| ||||| || || |
Sbjct: 587 cggtggcagagcaggaggcgtgcaaggcggccgaagagcgcggcgtcgacctcgtcgtcg 646
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
| | ||||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||
Sbjct: 647 tcagccccgtgctggtggtcggcccgctgctgcagccgacggtgaacgccagcgccgtgc 706
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
|||||||||||||||| |||||||||||| | | |||||| ||||||||||||||||
Sbjct: 707 acatcctcaagtacctcgacggctcggccaagaagtacgccaatgccgtgcaggcgtacg 766
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccg-cgcgtcc 1004
|||||||||||||||| || | |||||| |||||||||||||| || || | || |||
Sbjct: 767 tggacgtgcgcgacgtcgcggctgcgcacgtccgcgtcttcgag-gcgccggaggcctcc 825
Query: 1005 ggccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcc 1064
||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |
Sbjct: 826 ggccggcacctctgcgccgagcgcgtcctgcaccgtgaggacgtcgtccacatcctcggc 885
Query: 1065 aagctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaag 1124
||||||||||||||||| || || || | |||||||| ||||||||||| || ||||||
Sbjct: 886 aagctcttccccgagtatcctgtgcccacaaggtgctctgacgaggtgaacccacggaag 945
Query: 1125 cagccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtc 1184
|||||||||||| | |||||| ||||||| | ||| || || || || ||| || ||
Sbjct: 946 cagccgtacaagatgtccaacaagaagctgcaggatcttggcctccacttcatacctgtg 1005
Query: 1185 agccagtcgctttacgacacggtgaagaacctccaggagaagggacacct 1234
||| | ||||| ||||| |||||||||| ||||||||||||||| |||||
Sbjct: 1006 agcgactcgctctacgagacggtgaagagcctccaggagaaggggcacct 1055
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full
insert sequence
Length = 1265
Score = 813 bits (410), Expect = 0.0
Identities = 817/950 (86%), Gaps = 2/950 (0%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 108 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 167
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 168 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 227
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 228 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcctctgcaagg 287
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || ||||||||| ||||| || |||||| | |||||||| ||||| ||||
Sbjct: 288 ccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgtgttcc 347
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 348 acaccgcctcccccgtcaccgatgaccctgagcagatggtggagccggcggtgcggggga 407
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 408 cggagtacgtgataaaggcggcggcggaggccggcacggtgcgccgggtggtgttcacgt 467
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||
Sbjct: 468 cgtccatcggcgccgtcaccatggaccccaaccgcggccccgacgtggtcgtcgacgagt 527
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 528 cctgctggagcgacctcgagttctgcaagaaaaccaagaactggtactgctacggtaagg 587
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||| ||||| | |||||| || ||||| ||| ||||| ||||| || || |
Sbjct: 588 cggtggcagagcaggaggcgtgcaaggcggccgaagagcgcggcgtcgacctcgtcgtcg 647
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
| | ||||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||
Sbjct: 648 tcagccccgtgctggtggtcggcccgctgctgcagccgacggtgaacgccagcgccgtgc 707
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
|||||||||||||||| |||||||||||| | | |||||| ||||||||||||||||
Sbjct: 708 acatcctcaagtacctcgacggctcggccaagaagtacgccaatgccgtgcaggcgtacg 767
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccg-cgcgtcc 1004
|||||||||||||||| || | |||||| |||||||||||||| || || | || |||
Sbjct: 768 tggacgtgcgcgacgtcgcggctgcgcacgtccgcgtcttcgag-gcgccggaggcctcc 826
Query: 1005 ggccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcc 1064
||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |
Sbjct: 827 ggccggcacctctgcgccgagcgcgtcctgcaccgtgaggacgtcgtccacatcctcggc 886
Query: 1065 aagctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaag 1124
||||||||||||||||| || || || | |||||||| |||||| |||| || ||||||
Sbjct: 887 aagctcttccccgagtatcctgtgcccacaaggtgctctgacgagatgaacccacggaag 946
Query: 1125 cagccgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtc 1184
|||||||||||| | |||||| ||||| | | ||| || || || || ||| || ||
Sbjct: 947 cagccgtacaagatgtccaacaagaagttgcaggatcttggcctccacttcatacctgtg 1006
Query: 1185 agccagtcgctttacgacacggtgaagaacctccaggagaagggacacct 1234
||| | ||||| ||||| |||||||||| ||||||||||||||| |||||
Sbjct: 1007 agcgactcgctctacgagacggtgaagagcctccaggagaaggggcacct 1056
>dbj|AK107198.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A12, full
insert sequence
Length = 1253
Score = 755 bits (381), Expect = 0.0
Identities = 695/797 (87%), Gaps = 2/797 (0%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 102 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 161
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 162 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 221
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 222 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcctctgcaagg 281
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || ||||||||| ||||| || |||||| | |||||||| ||||| ||||
Sbjct: 282 ccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgtgttcc 341
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 342 acaccgcctcccccgtcaccgatgaccctgagcagatggtggagccggcggtgcggggga 401
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 402 cggagtacgtgataaaggcggcggcggaggccggcacggtgcgccgggtggtgttcacgt 461
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||
Sbjct: 462 cgtccatcggcgccgtcaccatggaccccaaccgcggccccgacgtggtcgtcgacgagt 521
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 522 cctgctggagcgacctcgagttctgcaagaaaaccaagaactggtactgctacggtaagg 581
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||| ||||| | |||||| || ||||| ||| ||||| ||||| || || |
Sbjct: 582 cggtggcagagcaggaggcgtgcaaggcggccgaagagcgcggcgtcgacctcgtcgtcg 641
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
| | ||||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||
Sbjct: 642 tcagccccgtgctggtggtcggcccgctgctgcagccgacggtgaacgccagcgccgtgc 701
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
|||||||||||||||| |||||||| ||| | | |||||| ||||||||||||||||
Sbjct: 702 acatcctcaagtacctcgacggctcagccaagaagtacgccaatgccgtgcaggcgtacg 761
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccg-cgcgtcc 1004
|||||||||||||||| || | |||||| |||||||||||||| || || | || |||
Sbjct: 762 tggacgtgcgcgacgtcgcggctgcgcacgtccgcgtcttcgag-gcgccggaggcctcc 820
Query: 1005 ggccgccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgcc 1064
||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |
Sbjct: 821 ggccggcacctctgcgccgagcgcgtcctgcaccgtgaggacgtcgtccacatcctcggc 880
Query: 1065 aagctcttccccgagta 1081
|||||||||||||||||
Sbjct: 881 aagctcttccccgagta 897
>gb|CB679593.1|CB679593 OSJNEf03E14.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf03E14 5', mRNA sequence
Length = 813
Score = 698 bits (352), Expect = 0.0
Identities = 639/732 (87%), Gaps = 2/732 (0%)
Strand = Plus / Plus
Query: 303 gtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctcgag 362
||||| || |||||||| |||||||||||||| |||||| | || ||||||||||| |||
Sbjct: 82 gtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcgtcaagctgctgctggag 141
Query: 363 aagggatacactgtgaagggcaccgtcaggaacccagatgacccgaagaacgcgcacctc 422
| ||| ||||| ||||||||||| || || ||||||||||||||||||||||| |||||
Sbjct: 142 aggggctacaccgtgaagggcacagtgagaaacccagatgacccgaagaacgcccacctg 201
Query: 423 aaggcgctggacggcgccgccgagcggctgatcctctgcaaggccgatctgctggactac 482
||||||||||||||||||| |||| ||||| |||||||||||||||| || || ||||||
Sbjct: 202 aaggcgctggacggcgccgacgagaggctggtcctctgcaaggccgacctcctcgactac 261
Query: 483 gacgccatctgccgcgccgtgcagggctgccagggcgtcttccacaccgcctcccccgtc 542
||| ||||| || |||||| | |||||||| ||||| |||||||||||||||||||||
Sbjct: 262 gactccatccgcgccgccgtcgacggctgccacggcgtgttccacaccgcctcccccgtc 321
Query: 543 accgacgacccggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaac 602
||||| ||||| ||||| |||||||||||||||||||| || || ||||||||||| ||
Sbjct: 322 accgatgaccctgagcagatggtggagccggcggtgcgggggacggagtacgtgataaag 381
Query: 603 gcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtg 662
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 382 gcggcggcggaggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtc 441
Query: 663 accatggaccccaagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctc 722
|||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||||
Sbjct: 442 accatggaccccaaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctc 501
Query: 723 gagttctgcgagaaaaccaggaactggtactgctacggcaaggcggtggcggagcacgcg 782
||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||| | |
Sbjct: 502 gagttctgcaagaaaaccaagaactggtactgctacggtaaggcggtggcagagcaggag 561
Query: 783 gcgtgggagacggcccggcggcggggcgtggacctggtggtggtgaaccccgtgctggtg 842
||||| || ||||| ||| ||||| ||||| || || || | |||||||||||||
Sbjct: 562 gcgtgcaaggcggccgaagagcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtg 621
Query: 843 gtgggccccctgctgcaggcgacggtgaacgccagcatcgcgcacatcctcaagtacctg 902
|| ||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 622 gtcggcccgctgctgcagccgacggtgaacgccagcgccgtgcacatcctcaagtacctc 681
Query: 903 gacggctcggcccgcaccttcgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtg 962
|||||||||||| | | |||||| ||||||||||||||||||||||||||||||||
Sbjct: 682 gacggctcggccaagaagtacgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtc 741
Query: 963 gccgacgcgcacctccgcgtcttcgagagcccccg-cgcgtccggccgccacctctgcgc 1021
|| | |||||| |||||||||||||| || || | || |||||||| |||||||||||
Sbjct: 742 gcggctgcgcacgtccgcgtcttcgag-gcgccggaggcctccggccggcacctctgcgc 800
Query: 1022 cgagcgcgtcct 1033
||||||||||||
Sbjct: 801 cgagcgcgtcct 812
>gb|CB660333.1|CB660333 OSJNEd01P10.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01P10 5', mRNA sequence
Length = 792
Score = 674 bits (340), Expect = 0.0
Identities = 610/700 (87%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 93 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 152
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 153 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 212
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 213 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcctctgcaagg 272
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || ||||||||| ||||| || |||||| | |||||||| ||||| ||||
Sbjct: 273 ccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgtgttcc 332
Query: 526 acaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggca 585
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| || |
Sbjct: 333 acaccgcctcccccgtcaccgatgaccctgagcagatggtggagccggcggtgcggggga 392
Query: 586 ccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgt 645
| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 393 cggagtacgtgataaaggcggcggcggaggccggcacggtgcgccgggtggtgttcacgt 452
Query: 646 cgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgacgagt 705
|||||||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||
Sbjct: 453 cgtccatcggcgccgtcaccatggaccccaaccgcggccccgacgtggtcgtcgacgagt 512
Query: 706 cgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctacggcaagg 765
| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 513 cctgctggagcgacctcgagttctgcaagaaaaccaagaactggtactgctacggtaagg 572
Query: 766 cggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctggtggtgg 825
||||||| ||||| | |||||| || ||||| ||| ||||| ||||| || || |
Sbjct: 573 cggtggcagagcaggaggcgtgcaaggcggccgaagagcgcggcgtcgacctcgtcgtcg 632
Query: 826 tgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagcatcgcgc 885
| | ||||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||
Sbjct: 633 tcagccccgtgctggtggtcggcccgctgctgcagccgacggtgaacgccagcgccgtgc 692
Query: 886 acatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacg 945
|||||||||||||||| |||||||||||| | | |||||| ||||||||||||||||
Sbjct: 693 acatcctcaagtacctcgacggctcggccaagaagtacgccaatgccgtgcaggcgtacg 752
Query: 946 tggacgtgcgcgacgtggccgacgcgcacctccgcgtctt 985
|||||||||||||||| || | |||||| ||||||||||
Sbjct: 753 tggacgtgcgcgacgtcgcggctgcgcacgtccgcgtctt 792
>dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR mRNA for cinnamoyl
coenzyme A reductase, partial cds
Length = 1111
Score = 502 bits (253), Expect = e-139
Identities = 409/461 (88%)
Strand = Plus / Plus
Query: 327 tacatcgcctcgtggttggtgaagctgctgctcgagaagggatacactgtgaagggcacc 386
|||||||| |||||| | || ||||||||||| |||| ||| ||||| |||||||||||
Sbjct: 1 tacatcgcgtcgtggctcgtcaagctgctgctggagaggggctacaccgtgaagggcaca 60
Query: 387 gtcaggaacccagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgag 446
|| || ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||
Sbjct: 61 gtgagaaacccagatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgag 120
Query: 447 cggctgatcctctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcag 506
||||| |||||||||||||||| || || ||||||||| ||||| || |||| | |
Sbjct: 121 aggctggtcctctgcaaggccgacctcctcgactacgactccatccgcgccgccctcgac 180
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccgacgacccggagcaaatggtg 566
|||||||| ||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 181 ggctgccacggcgtgttccacacggcctcgcccgtcaccgatgaccctgagcagatggtg 240
Query: 567 gagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcggaggccggcacggtg 626
|||||||||||||| || || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 241 gagccggcggtgcgggggacggagtacgtgataaaggcggcggcggaggccggcacggtg 300
Query: 627 cggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccccaagcgcgggccc 686
|| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 301 cgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccccaaccgcggcccc 360
Query: 687 gacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcgagaaaaccaggaac 746
||||| || ||||||||||| |||||||||||||||||||||||| ||||||||| ||||
Sbjct: 361 gacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaagaaaaccaagaac 420
Query: 747 tggtactgctacggcaaggcggtggcggagcacgcggcgtg 787
|||||||||||||| ||||||||||| ||||| | ||||||
Sbjct: 421 tggtactgctacggtaaggcggtggcagagcaggaggcgtg 461
Score = 216 bits (109), Expect = 3e-053
Identities = 316/380 (83%), Gaps = 4/380 (1%)
Strand = Plus / Plus
Query: 866 ggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcaccttcgc 925
||||||||||||| || |||||||||||||||||| |||||||||||| | | |||
Sbjct: 501 ggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagtacgc 560
Query: 926 caacgccgtgcaggcgtacgtggacgtgcgcgacgtggccg-acgcgcacctccgcgtct 984
||| ||||||||||||||||||||||||| ||||| || | |||||||| |||||||||
Sbjct: 561 caatcccgtgcaggcgtacgtggacgtgcg-gacgtcgcgggacgcgcacgtccgcgtct 619
Query: 985 tcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcgag 1043
||||| || || | | | |||||||| |||| ||||||||||||||||| ||||| |||
Sbjct: 620 tcgag-gcgccggaggcctccggccggtacctntgcgccgagcgcgtcctgcaccgtgag 678
Query: 1044 gacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtcccagccaggtgctcc 1103
|||||||||| |||||| | |||||| ||||||||||| || || || | ||||||||
Sbjct: 679 gacgtcgtccacatccttggcaagcttttccccgagtatcctgtgcccacaaggtgctct 738
Query: 1104 gacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagctccgggacctg 1163
||||||||||| || |||||||||||||||||| | |||||| ||||||| | ||| ||
Sbjct: 739 gacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagctgcaggatctt 798
Query: 1164 gggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaacctccaggag 1223
|| || || ||| || || ||| | ||||| ||||| |||||||||| ||||||||||
Sbjct: 799 ggcctccacttcatacctgtgagcgactcgctctacgagacggtgaagagcctccaggag 858
Query: 1224 aagggacacctgccggtgct 1243
||||| ||||| || |||||
Sbjct: 859 aaggggcaccttccagtgct 878
>gb|CB660334.1|CB660334 OSJNEd01P10.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01P10 3', mRNA sequence
Length = 686
Score = 387 bits (195), Expect = e-104
Identities = 479/571 (83%), Gaps = 2/571 (0%)
Strand = Plus / Minus
Query: 665 catggaccccaagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcga 724
|||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||||||
Sbjct: 686 catggaccccaaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcga 627
Query: 725 gttctgcgagaaaaccaggaactggtactgctacggcaaggcggtggcggagcacgcggc 784
||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 626 gttctgcaagaaaaccaagaactggtactgctacggtaaggcggtggcagagcaggaggc 567
Query: 785 gtgggagacggcccggcggcggggcgtggacctggtggtggtgaaccccgtgctggtggt 844
||| |||||||| ||| ||||| ||||| || || || | |||||||||||||||
Sbjct: 566 gtgcaagacggccgaagagcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggt 507
Query: 845 gggccccctgctgcaggcgacggtgaacgccagcatcgcgcacatcctcaagtacctgga 904
||||| ||||||||| ||||||||||||||||| || |||||||||||||||||| ||
Sbjct: 506 cggcccgctgctgcagccgacggtgaacgccagcgccgtgcacatcctcaagtacctcga 447
Query: 905 cggctcggcccgcaccttcgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggc 964
||||||| || | | |||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 446 cggctcgtccaagaagtacgccaattccgtgcaggcgtacgtggacgtgcgcgacgtcgc 387
Query: 965 cgacgcgcacctccgcgtcttcgagagcccccg-cgcgtccggccgccacctctgcgccg 1023
| |||||| |||||||||||||| || || | || |||||||| |||||||||||||
Sbjct: 386 ggctgcgcacgtccgcgtcttcgag-gcgccggaggcctccggccggcacctctgcgccg 328
Query: 1024 agcgcgtcctccaccgcgaggacgtcgtccgcatcctcgccaagctcttccccgagtacc 1083
|| ||||||| ||||| ||||||||||||| |||||||| |||| ||||||||||||| |
Sbjct: 327 agggcgtcctgcaccgtgaggacgtcgtccacatcctcggcaagatcttccccgagtatc 268
Query: 1084 ccgtcccagccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctcca 1143
| || || | ||||||| ||||||||||| || |||||||||||||||||| | ||||
Sbjct: 267 ctgtgcccacaaggtgctttgacgaggtgaacccacggaagcagccgtacaagatgtcca 208
Query: 1144 accagaagctccgggacctggggctgcagttccggccggtcagccagtcgctttacgaca 1203
|| ||||||| | ||| || || || || ||| || || || | |||||||| ||
Sbjct: 207 acaagaagctgcaggatcttggcctccacttcatacctgtgagtgactcgctttaagagc 148
Query: 1204 cggtgaagaacctccaggagaagggacacct 1234
||||||||| ||||||||||||||| |||||
Sbjct: 147 cggtgaagagcctccaggagaaggggcacct 117
>gb|D46598.1|D46598 RICS11367A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 388
Score = 379 bits (191), Expect = e-102
Identities = 277/305 (90%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 402 gacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgc 461
|||||||||||||||||||| |||||||| |||||||| | |||| | ||| | ||||||
Sbjct: 1 gacccgaagaacgcgcacctgaaggcgctcgacggcgc-gtcgagngtctggtgctctgc 59
Query: 462 aaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtc 521
|||||||| || || |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 60 aaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacggcgtc 119
Query: 522 ttccacaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgc 581
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct: 120 ttccacaccgcctcccccgtcaccgacgaccccgagcagatggtggagccggcggtgagc 179
Query: 582 ggcaccgagtacgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttc 641
|| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gggacggagtacgtgataaacgcggcggcggaggccggcacggtgcggcgggtggtgttc 239
Query: 642 acgtcgtccatcggcgccgtgaccatggaccccaagcgcgggcccgacgtcgtggtcgac 701
|||||||| ||||| || ||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 240 acgtcgtcgatcggggcggtgaccatggaccccaaccgngggcccgacgtcgtcgtcgac 299
Query: 702 gagtc 706
|||||
Sbjct: 300 gagtc 304
>gb|CB678909.1|CB678909 OSJNEf01L21.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf01L21 5', mRNA sequence
Length = 791
Score = 373 bits (188), Expect = e-100
Identities = 308/348 (88%)
Strand = Plus / Plus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 444 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 503
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 504 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 563
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 564 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 623
Query: 734 gaaaaccaggaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagac 793
|||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| || |
Sbjct: 624 gaaaaccaagaactggtactgctacggtaaggcggtggcagagcacgaggcgtgcaaggc 683
Query: 794 ggcccggcggcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccct 853
|||| ||| ||||| ||||| || || || | ||||||||||||||| ||||| ||
Sbjct: 684 ggccgaagagcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgct 743
Query: 854 gctgcaggcgacggtgaacgccagcatcgcgcacatcctcaagtacct 901
||||||| |||| |||||||||||| || ||||||||||||||||||
Sbjct: 744 gctgcagccgacagtgaacgccagcgccgtgcacatcctcaagtacct 791
Score = 246 bits (124), Expect = 3e-062
Identities = 232/268 (86%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 72 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 131
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 132 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 191
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 192 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcctctgcaagg 251
Query: 466 ccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttcc 525
|||| || || ||||||||| ||||| || |||||| | |||||||| ||||| ||||
Sbjct: 252 ccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacggcgtgttcc 311
Query: 526 acaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||| |||||
Sbjct: 312 acaccgcctcccccgtcaccgatgaccc 339
>dbj|AP003890.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1244_D07,
*** SEQUENCING IN PROGRESS ***
Length = 104295
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 7402 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 7343
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 7342 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 7283
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 7282 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 7223
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 7222 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 7163
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 7162 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 7103
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7102 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 7055
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 9734 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 9675
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 9674 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 9615
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 9614 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 9555
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 9554 ggaaaccagg 9545
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 10060 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 10001
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 10000 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 9941
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 9940 gcgtcttccacaccgcctcccccgtcaccgacgaccc 9904
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 10265 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 10206
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 10205 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 10152
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 3714 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 3655
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 3654 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 3595
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 3594 cctccaggagaagggccacctgccggtgctcg 3563
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0528B09
Length = 156897
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 107313 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 107254
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 107253 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 107194
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 107193 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 107134
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 107133 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 107074
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 107073 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 107014
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107013 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 106966
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 109645 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 109586
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 109585 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 109526
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 109525 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 109466
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 109465 ggaaaccagg 109456
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 109971 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 109912
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 109911 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 109852
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 109851 gcgtcttccacaccgcctcccccgtcaccgacgaccc 109815
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 110176 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 110117
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 110116 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 110063
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 103625 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 103566
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 103565 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 103506
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 103505 cctccaggagaagggccacctgccggtgctcg 103474
>gb|AACV01018567.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018567, whole
genome shotgun sequence
Length = 9310
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Plus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 2340 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 2399
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 2400 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 2459
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 2460 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 2519
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 2520 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 2579
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 2580 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 2639
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2640 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 2687
Score = 186 bits (94), Expect = 2e-044
Identities = 167/190 (87%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 8 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 67
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||| ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 68 ggccgccacggtgcggcgggtggtgtt-acgtcgtcgatcggggcggtgaccatggaccc 126
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| |||||| |||||||||| ||| | |||| |||||||||||||| || | |||| |
Sbjct: 127 caaccgcggggccgacgtcgtcctcggcaagtcctgctggagcgaccttgactactgcaa 186
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 187 ggaaaccagg 196
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Plus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 6028 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 6087
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 6088 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 6147
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 6148 cctccaggagaagggccacctgccggtgctcg 6179
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 21265231 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 21265172
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 21265171 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 21265112
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 21265111 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 21265052
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 21265051 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 21264992
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 21264991 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 21264932
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 21264931 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 21264884
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 21267563 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 21267504
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 21267503 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 21267444
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 21267443 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 21267384
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 21267383 ggaaaccagg 21267374
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 21267889 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 21267830
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 21267829 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 21267770
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 21267769 gcgtcttccacaccgcctcccccgtcaccgacgaccc 21267733
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 21268094 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 21268035
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 21268034 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 21267981
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 21261543 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 21261484
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 21261483 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 21261424
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 21261423 cctccaggagaagggccacctgccggtgctcg 21261392
Score = 131 bits (66), Expect = 1e-027
Identities = 263/326 (80%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 699 gacgagtcgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctac 758
|||||| ||||||||||||||||||| |||| | | ||| | |||||||||||||||
Sbjct: 10481159 gacgagacgtgctggagcgacctcgaccactgcagggacaccggaaactggtactgctac 10481218
Query: 759 ggcaaggcggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctg 818
| |||| ||||||||||||| |||||||||||| ||| | |||| | |||||||
Sbjct: 10481219 gccaagacggtggcggagcaggcggcgtgggagctcgccaaggagcggcggctggacctc 10481278
Query: 819 gtggtggtgaaccccgtgctggtggtgggccccctgctgcag-gcgacggtgaacgccag 877
|| || || ||||| ||||||| | ||||| ||||||||| ||| ||||||||||||
Sbjct: 10481279 gtcgtcgtcaacccgtcgctggtgctcggcccgctgctgcagcgcgg-ggtgaacgccag 10481337
Query: 878 catcgcgcacatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgca 937
|| |||| | ||||||||||||||||||||||| ||||||| |||| |||| | |||
Sbjct: 10481338 cacgtggcacgtgctcaagtacctggacggctcggcgcgcacctacgccgacgcggcgca 10481397
Query: 938 ggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccg 997
|||||||||| |||| |||||||| || ||||||||| |||| || |||| ||||
Sbjct: 10481398 ggcgtacgtgcacgtccgcgacgtcgcggacgcgcacgcgcgcgcctacgagtcccccgc 10481457
Query: 998 cgcgtccggccgccacctctgcgccg 1023
|||| ||||||| ||||||||||||
Sbjct: 10481458 cgcgcgcggccgctacctctgcgccg 10481483
Score = 81.8 bits (41), Expect = 1e-012
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccgacgacccgg 555
|||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10480865 ggctgcgagggcgtcttccacaccgcctcccccatcaccgacgacccgg 10480913
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 408 aagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctc 458
||||||||||| |||| |||||||| ||| ||||| |||||||||| ||||
Sbjct: 10480766 aagaacgcgcatctcatggcgctggccggtgccgcggagcggctgaccctc 10480816
Score = 48.1 bits (24), Expect = 0.014
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||| ||||| |||||||| | ||||| |||||| |||||| | || ||||| || |||
Sbjct: 10479972 accgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 10480031
Query: 360 gagaaggg 367
||||||||
Sbjct: 10480032 gagaaggg 10480039
Score = 46.1 bits (23), Expect = 0.056
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 592 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcca 651
||||||||| |||||||||||| || ||| || || || |||||| | |||||||| |
Sbjct: 10481058 acgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcgtcga 10481117
Query: 652 tcggcgccgtg 662
|||||||||||
Sbjct: 10481118 tcggcgccgtg 10481128
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 12759268 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 12759209
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 12759208 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 12759149
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 12759148 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 12759089
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 12759088 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 12759029
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 12759028 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 12758969
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 12758968 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 12758921
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 12762454 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 12762395
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 12762394 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 12762335
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 12762334 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 12762275
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 12762274 ggaaaccagg 12762265
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 12762778 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 12762719
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 12762718 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 12762659
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 12762658 gcgtcttccacaccgcctcccccgtcaccgacgaccc 12762622
Score = 186 bits (94), Expect = 2e-044
Identities = 167/190 (87%), Gaps = 1/190 (0%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 12761600 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 12761541
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||| ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 12761540 ggccgccacggtgcggcgggtggtgtt-acgtcgtcgatcggggcggtgaccatggaccc 12761482
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| |||||| |||||||||| ||| | |||| |||||||||||||| || | |||| |
Sbjct: 12761481 caaccgcggggccgacgtcgtcctcggcaagtcctgctggagcgaccttgactactgcaa 12761422
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 12761421 ggaaaccagg 12761412
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 12762983 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 12762924
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 12762923 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 12762870
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 12755580 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 12755521
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 12755520 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 12755461
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 12755460 cctccaggagaagggccacctgccggtgctcg 12755429
Score = 89.7 bits (45), Expect = 4e-015
Identities = 257/325 (79%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 699 gacgagtcgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctac 758
|||||| ||||||||||||||||||| |||| | | ||| | |||||||||||||||
Sbjct: 2501870 gacgagacgtgctggagcgacctcgaccactgcagggacaccggaaactggtactgctac 2501929
Query: 759 ggcaaggcggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctg 818
| |||| ||||||||||||| |||||||||||| ||| | |||| | |||||||
Sbjct: 2501930 gccaagacggtggcggagcaggcggcgtgggagctcgccaaggagcggcggctggacctc 2501989
Query: 819 gtggtggtgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagc 878
|| || || ||||| ||||||| | ||||| |||||||| ||| |||||||||||||
Sbjct: 2501990 gtcgtcgtcaacccgtcgctggtgctcggcccgctgctgca-gcgcgggtgaacgccagc 2502048
Query: 879 atcgcgcacatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcag 938
| |||| | ||||||||||||||| ||||||| ||||||| ||| |||| |||
Sbjct: 2502049 acgtggcacgtgctcaagtacctggac-gctcggcgcgcacctaggccgacgcgcgccag 2502107
Query: 939 gcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgc 998
||||||||| |||| |||||||| || || |||||| |||| || |||| |||| |
Sbjct: 2502108 gcgtacgtgcacgtccgcgacgtcgcggaagcgcacgcgcgcgcctacgagtcccccgcc 2502167
Query: 999 gcgtccggccgccacctctgcgccg 1023
||| ||||||| ||||||||||||
Sbjct: 2502168 gcgcgcggccgctacctctgcgccg 2502192
Score = 81.8 bits (41), Expect = 1e-012
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccgacgacccgg 555
|||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2501576 ggctgcgagggcgtcttccacaccgcctcccccatcaccgacgacccgg 2501624
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 408 aagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctc 458
||||||||||| |||| |||||||| ||| ||||| |||||||||| ||||
Sbjct: 2501477 aagaacgcgcatctcatggcgctggccggtgccgcggagcggctgaccctc 2501527
Score = 48.1 bits (24), Expect = 0.014
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||| ||||| |||||||| | ||||| |||||| |||||| | || ||||| || |||
Sbjct: 2500683 accgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 2500742
Query: 360 gagaaggg 367
||||||||
Sbjct: 2500743 gagaaggg 2500750
Score = 46.1 bits (23), Expect = 0.056
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 592 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcca 651
||||||||| |||||||||||| || ||| || || || |||||| | |||||||| |
Sbjct: 2501769 acgtgatcaccgcggcggcggacgcgggcggcgtccgtcgcgtggtgatgacgtcgtcga 2501828
Query: 652 tcggcgccgtg 662
|||||||||||
Sbjct: 2501829 tcggcgccgtg 2501839
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 20361274 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 20361215
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 20361214 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 20361155
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 20361154 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 20361095
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 20361094 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 20361035
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 20361034 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 20360975
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 20360974 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 20360927
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 20364460 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 20364401
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 20364400 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 20364341
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 20364340 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 20364281
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 20364280 ggaaaccagg 20364271
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 20364784 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 20364725
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 20364724 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 20364665
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 20364664 gcgtcttccacaccgcctcccccgtcaccgacgaccc 20364628
Score = 186 bits (94), Expect = 2e-044
Identities = 167/190 (87%), Gaps = 1/190 (0%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 20363606 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 20363547
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||| ||||||||||||||||||||| |||||||| ||||| || ||||||||||||||
Sbjct: 20363546 ggccgccacggtgcggcgggtggtgtt-acgtcgtcgatcggggcggtgaccatggaccc 20363488
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| |||||| |||||||||| ||| | |||| |||||||||||||| || | |||| |
Sbjct: 20363487 caaccgcggggccgacgtcgtcctcggcaagtcctgctggagcgaccttgactactgcaa 20363428
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 20363427 ggaaaccagg 20363418
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 20364989 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 20364930
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 20364929 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 20364876
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 20357586 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 20357527
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 20357526 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 20357467
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 20357466 cctccaggagaagggccacctgccggtgctcg 20357435
Score = 89.7 bits (45), Expect = 4e-015
Identities = 257/325 (79%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 699 gacgagtcgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctac 758
|||||| ||||||||||||||||||| |||| | | ||| | |||||||||||||||
Sbjct: 10103876 gacgagacgtgctggagcgacctcgaccactgcagggacaccggaaactggtactgctac 10103935
Query: 759 ggcaaggcggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctg 818
| |||| ||||||||||||| |||||||||||| ||| | |||| | |||||||
Sbjct: 10103936 gccaagacggtggcggagcaggcggcgtgggagctcgccaaggagcggcggctggacctc 10103995
Query: 819 gtggtggtgaaccccgtgctggtggtgggccccctgctgcaggcgacggtgaacgccagc 878
|| || || ||||| ||||||| | ||||| |||||||| ||| |||||||||||||
Sbjct: 10103996 gtcgtcgtcaacccgtcgctggtgctcggcccgctgctgca-gcgcgggtgaacgccagc 10104054
Query: 879 atcgcgcacatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcag 938
| |||| | ||||||||||||||| ||||||| ||||||| ||| |||| |||
Sbjct: 10104055 acgtggcacgtgctcaagtacctggac-gctcggcgcgcacctaggccgacgcgcgccag 10104113
Query: 939 gcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgc 998
||||||||| |||| |||||||| || || |||||| |||| || |||| |||| |
Sbjct: 10104114 gcgtacgtgcacgtccgcgacgtcgcggaagcgcacgcgcgcgcctacgagtcccccgcc 10104173
Query: 999 gcgtccggccgccacctctgcgccg 1023
||| ||||||| ||||||||||||
Sbjct: 10104174 gcgcgcggccgctacctctgcgccg 10104198
Score = 81.8 bits (41), Expect = 1e-012
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccgacgacccgg 555
|||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10103582 ggctgcgagggcgtcttccacaccgcctcccccatcaccgacgacccgg 10103630
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 408 aagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctc 458
||||||||||| |||| |||||||| ||| ||||| |||||||||| ||||
Sbjct: 10103483 aagaacgcgcatctcatggcgctggccggtgccgcggagcggctgaccctc 10103533
Score = 48.1 bits (24), Expect = 0.014
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||| ||||| |||||||| | ||||| |||||| |||||| | || ||||| || |||
Sbjct: 10102689 accgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 10102748
Query: 360 gagaaggg 367
||||||||
Sbjct: 10102749 gagaaggg 10102756
Score = 46.1 bits (23), Expect = 0.056
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 592 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcca 651
||||||||| |||||||||||| || ||| || || || |||||| | |||||||| |
Sbjct: 10103775 acgtgatcaccgcggcggcggacgcgggcggcgtccgtcgcgtggtgatgacgtcgtcga 10103834
Query: 652 tcggcgccgtg 662
|||||||||||
Sbjct: 10103835 tcggcgccgtg 10103845
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 365 bits (184), Expect = 5e-098
Identities = 307/348 (88%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 21503318 gaactggtactgctacgggaaggcggtggcggagcaggcggcgtgggaggcggcgcggcg 21503259
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||| ||||||||||||||||| ||||||||| | || || ||||||||| |
Sbjct: 21503258 gcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgctgcagcc 21503199
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||
Sbjct: 21503198 gacggtgaacgccagcgtcgcccacatcctcaagtacctggacggctcggccagcaagtt 21503139
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||||||||| ||||| ||||| ||||| |||||||| |||| ||| ||||||| |||
Sbjct: 21503138 cgccaacgccgtccaggcctacgtcgacgtccgcgacgtcgccgccgcccacctcctcgt 21503079
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
||||||| ||| ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 21503078 cttcgagtccccttccgccgccggccgcttcctctgcgccgagtctgtcctccaccgcga 21503019
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
|| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 21503018 gggtgtcgtccgcatcctcgccaagctcttccccgagtaccctgtccc 21502971
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 21505650 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 21505591
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 21505590 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 21505531
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 21505530 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 21505471
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 21505470 ggaaaccagg 21505461
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 21505976 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 21505917
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 21505916 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 21505857
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 21505856 gcgtcttccacaccgcctcccccgtcaccgacgaccc 21505820
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 21506181 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 21506122
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 21506121 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 21506068
Score = 174 bits (88), Expect = 9e-041
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1094 caggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagct 1153
|||||||||||||||| ||| || ||||||||||||||||| | || |||||||||||
Sbjct: 21499630 caggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccagaagct 21499571
Query: 1154 ccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaagaa 1213
|||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 21499570 ccgggacctggggctggagttccggccggcgagccagtcgctgtacgagacggtgaagtg 21499511
Query: 1214 cctccaggagaagggacacctgccggtgctcg 1245
||||||||||||||| ||||||||||||||||
Sbjct: 21499510 cctccaggagaagggccacctgccggtgctcg 21499479
Score = 131 bits (66), Expect = 1e-027
Identities = 263/326 (80%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 699 gacgagtcgtgctggagcgacctcgagttctgcgagaaaaccaggaactggtactgctac 758
|||||| ||||||||||||||||||| |||| | | ||| | |||||||||||||||
Sbjct: 10713633 gacgagacgtgctggagcgacctcgaccactgcagggacaccggaaactggtactgctac 10713692
Query: 759 ggcaaggcggtggcggagcacgcggcgtgggagacggcccggcggcggggcgtggacctg 818
| |||| ||||||||||||| |||||||||||| ||| | |||| | |||||||
Sbjct: 10713693 gccaagacggtggcggagcaggcggcgtgggagctcgccaaggagcggcggctggacctc 10713752
Query: 819 gtggtggtgaaccccgtgctggtggtgggccccctgctgcag-gcgacggtgaacgccag 877
|| || || ||||| ||||||| | ||||| ||||||||| ||| ||||||||||||
Sbjct: 10713753 gtcgtcgtcaacccgtcgctggtgctcggcccgctgctgcagcgcgg-ggtgaacgccag 10713811
Query: 878 catcgcgcacatcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgca 937
|| |||| | ||||||||||||||||||||||| ||||||| |||| |||| | |||
Sbjct: 10713812 cacgtggcacgtgctcaagtacctggacggctcggcgcgcacctacgccgacgcggcgca 10713871
Query: 938 ggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccg 997
|||||||||| |||| |||||||| || ||||||||| |||| || |||| ||||
Sbjct: 10713872 ggcgtacgtgcacgtccgcgacgtcgcggacgcgcacgcgcgcgcctacgagtcccccgc 10713931
Query: 998 cgcgtccggccgccacctctgcgccg 1023
|||| ||||||| ||||||||||||
Sbjct: 10713932 cgcgcgcggccgctacctctgcgccg 10713957
Score = 81.8 bits (41), Expect = 1e-012
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccgacgacccgg 555
|||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10713339 ggctgcgagggcgtcttccacaccgcctcccccatcaccgacgacccgg 10713387
Score = 54.0 bits (27), Expect = 2e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 408 aagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctc 458
||||||||||| |||| |||||||| ||| ||||| |||||||||| ||||
Sbjct: 10713240 aagaacgcgcatctcatggcgctggccggtgccgcggagcggctgaccctc 10713290
Score = 48.1 bits (24), Expect = 0.014
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||| ||||| |||||||| | ||||| |||||| |||||| | || ||||| || |||
Sbjct: 10712446 accgtctgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagctcctcctc 10712505
Query: 360 gagaaggg 367
||||||||
Sbjct: 10712506 gagaaggg 10712513
Score = 46.1 bits (23), Expect = 0.056
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 592 acgtgatcaacgcggcggcggaggccggcacggtgcggcgggtggtgttcacgtcgtcca 651
||||||||| |||||||||||| || ||| || || || |||||| | |||||||| |
Sbjct: 10713532 acgtgatcaccgcggcggcggacgcgggcggcgtccgccgcgtggtgatgacgtcgtcga 10713591
Query: 652 tcggcgccgtg 662
|||||||||||
Sbjct: 10713592 tcggcgccgtg 10713602
>gb|C72834.1|C72834 C72834 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2341_1A, mRNA sequence
Length = 463
Score = 287 bits (145), Expect = 9e-075
Identities = 247/277 (89%), Gaps = 4/277 (1%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |
Sbjct: 123 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgngtacatcgcgtcgtggctcg 182
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccg-tcaggaacccagatgac 404
||||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 183 tgaagctgctgcttgagaagggctacactgtcaagggcaccgttcaggaacccagatgac 242
Query: 405 ccgaagaacgcgcacc-tcaaggcgctggacggcgccgccgagcggctgatcctctgcaa 463
|||||||||||||||| | |||||||| |||||||||| |||||||||| | ||||||||
Sbjct: 243 ccgaagaacgcgcaccttgaaggcgctcgacggcgccggcgagcggctggtgctctgcaa 302
Query: 464 ggccgatctgctggactacgacgccatctgccgcgccgt-gcagggctgccagggcgtct 522
|||||| || || |||||||||||||||||||||||||| || || ||||| |||||||
Sbjct: 303 ggccgacctcctcgactacgacgccatctgccgcgccgtcgccggcttgccanggcgtct 362
Query: 523 tccacaccgcctcccccgtcaccgacgacccggagca 559
| || | || || |||||||| |||||| || |||||
Sbjct: 363 ttcana-cggcttccccgtcaacgacgancccgagca 398
>gb|AU163559.1|AU163559 AU163559 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1704, mRNA sequence
Length = 412
Score = 278 bits (140), Expect = 8e-072
Identities = 173/184 (94%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 222 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 281
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 282 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 341
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||
Sbjct: 342 cgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgctctgcaagg 401
Query: 466 ccga 469
||||
Sbjct: 402 ccga 405
>gb|AU086004.1|AU086004 AU086004 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S10974, mRNA sequence
Length = 637
Score = 270 bits (136), Expect = 2e-069
Identities = 341/406 (83%), Gaps = 3/406 (0%)
Strand = Plus / Plus
Query: 830 ccccgtgctggtggtgggccccctgctgcaggc-gacggtgaacgccagcatcgcgcaca 888
|||||||||| |||| ||||| ||||||| || |||| ||||||||||| || |||||
Sbjct: 23 ccccgtgctgttggtcggcccgntgctgcaagccgacgttgaacgccagcgccgtgcaca 82
Query: 889 tcctcaagtacctggacggctcggcccgcaccttcgccaacgccgtgcaggcgtacgtgg 948
||||||||||||| |||||||||||| | | |||||| |||||||||||||||||||
Sbjct: 83 tcctcaagtacctcgacggctcggccaagaagtacgccaatgccgtgcaggcgtacgtgg 142
Query: 949 acgtgcgcgacgtggccgacgcgcacctccgcgtcttcgagagcccccgcgcgtccggcc 1008
||||||||||||| || | |||||| |||||||||||||| || || | |||||||
Sbjct: 143 acgtgcgcgacgtcgcggt-gcgcacgtccgcgtcttcgag-gcgccggaagntccggcc 200
Query: 1009 gccacctctgcgccgagcgcgtcctccaccgcgaggacgtcgtccgcatcctcgccaagc 1068
| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |||||
Sbjct: 201 ggcacctctgcgccgagcgcgtcctgcaccgtgaggacgtcgtccacatcctcggcaagc 260
Query: 1069 tcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagcagc 1128
||||||||||||| || || || | |||||||| ||||||||||| || ||||||||||
Sbjct: 261 tcttccccgagtatcctgtgcccacaaggtgctctgacgaggtgaacccacggaagcagc 320
Query: 1129 cgtacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtcagcc 1188
|||||||| | |||||| ||||||| | ||| || || || || ||| || || |||
Sbjct: 321 cgtacaagatgtccaacaagaagctgcaggatcttggcctccacttcatacctgtgagcg 380
Query: 1189 agtcgctttacgacacggtgaagaacctccaggagaagggacacct 1234
| ||||| ||||| |||||||||| ||||||||||||||| |||||
Sbjct: 381 actcgctctacgagacggtgaagagcctccaggagaaggggcacct 426
>gb|CB647116.1|CB647116 OSJNEb09O10.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09O10 5', mRNA sequence
Length = 818
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 574 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 515
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 514 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 455
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 454 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 395
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 394 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 335
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 334 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 276
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 275 aggacgtcgtccacatcctcggcaagctcttccccgagta 236
Score = 232 bits (117), Expect = 5e-058
Identities = 153/165 (92%)
Strand = Plus / Minus
Query: 566 ggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcggaggccggcacggt 625
||||||||||||||| || || ||||||||||| || |||||||||||||||||||||||
Sbjct: 779 ggagccggcggtgcgggggacggagtacgtgataaaggcggcggcggaggccggcacggt 720
Query: 626 gcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccccaagcgcgggcc 685
||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 719 gcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccccaaccgcggccc 660
Query: 686 cgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctg 730
|||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 659 cgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctg 615
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0701F11
Length = 154950
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 92911 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 92852
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 92851 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 92792
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 92791 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 92732
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 92731 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 92672
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 92671 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 92613
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 92612 aggacgtcgtccacatcctcggcaagctcttccccgagta 92573
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 93513 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 93454
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 93453 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 93394
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 93393 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 93334
Query: 734 gaaaacca 741
||||||||
Sbjct: 93333 gaaaacca 93326
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 93773 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 93714
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 93713 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 93654
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 93653 cgtgttccacaccgcctcccccgtcaccgatgaccc 93618
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 91403 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 91344
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 91343 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 91284
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 91283 gcctccaggagaaggggcacct 91262
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 94015 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 93956
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 93955 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 93902
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0668D04
Length = 148848
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 15108 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 15049
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 15048 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 14989
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 14988 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 14929
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 14928 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 14869
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 14868 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 14810
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 14809 aggacgtcgtccacatcctcggcaagctcttccccgagta 14770
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 15710 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 15651
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15650 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 15591
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 15590 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 15531
Query: 734 gaaaacca 741
||||||||
Sbjct: 15530 gaaaacca 15523
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 15970 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 15911
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 15910 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 15851
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 15850 cgtgttccacaccgcctcccccgtcaccgatgaccc 15815
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 13600 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 13541
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 13540 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 13481
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 13480 gcctccaggagaaggggcacct 13459
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 16212 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 16153
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 16152 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 16099
>gb|AACV01019998.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019998, whole
genome shotgun sequence
Length = 21483
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 16814 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 16873
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 16874 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 16933
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 16934 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 16993
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 16994 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 17053
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 17054 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 17112
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 17113 aggacgtcgtccacatcctcggcaagctcttccccgagta 17152
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Plus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 16212 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 16271
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 16272 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 16331
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 16332 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 16391
Query: 734 gaaaacca 741
||||||||
Sbjct: 16392 gaaaacca 16399
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 15952 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 16011
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 16012 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 16071
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 16072 cgtgttccacaccgcctcccccgtcaccgatgaccc 16107
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Plus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 18322 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 18381
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 18382 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 18441
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 18442 gcctccaggagaaggggcacct 18463
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 15710 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 15769
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 15770 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 15823
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 715268 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 715209
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 715208 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 715149
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 715148 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 715089
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 715088 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 715029
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 715028 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 714970
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 714969 aggacgtcgtccacatcctcggcaagctcttccccgagta 714930
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 715870 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 715811
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 715810 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 715751
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 715750 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 715691
Query: 734 gaaaacca 741
||||||||
Sbjct: 715690 gaaaacca 715683
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 716130 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 716071
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 716070 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 716011
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 716010 cgtgttccacaccgcctcccccgtcaccgatgaccc 715975
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 713760 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 713701
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 713700 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 713641
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 713640 gcctccaggagaaggggcacct 713619
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 716372 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 716313
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 716312 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 716259
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 4367663 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 4367604
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 4367603 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 4367544
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 4367543 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 4367484
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 4367483 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 4367424
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 4367423 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 4367365
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 4367364 aggacgtcgtccacatcctcggcaagctcttccccgagta 4367325
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 4368265 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 4368206
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4368205 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 4368146
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 4368145 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 4368086
Query: 734 gaaaacca 741
||||||||
Sbjct: 4368085 gaaaacca 4368078
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 4368525 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 4368466
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 4368465 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 4368406
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 4368405 cgtgttccacaccgcctcccccgtcaccgatgaccc 4368370
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 4366155 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 4366096
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 4366095 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 4366036
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 4366035 gcctccaggagaaggggcacct 4366014
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 4368767 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 4368708
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 4368707 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 4368654
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 13841474 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 13841415
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 13841414 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 13841355
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 13841354 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 13841295
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 13841294 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 13841235
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 13841234 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 13841176
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 13841175 aggacgtcgtccacatcctcggcaagctcttccccgagta 13841136
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 13842076 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 13842017
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 13842016 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 13841957
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 13841956 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 13841897
Query: 734 gaaaacca 741
||||||||
Sbjct: 13841896 gaaaacca 13841889
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 13842336 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 13842277
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 13842276 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 13842217
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 13842216 cgtgttccacaccgcctcccccgtcaccgatgaccc 13842181
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 13839966 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 13839907
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 13839906 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 13839847
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 13839846 gcctccaggagaaggggcacct 13839825
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 13842578 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 13842519
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 13842518 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 13842465
Score = 60.0 bits (30), Expect = 4e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||||||||| |||||||| | ||||| |||||| |||||| | || |||| || |||
Sbjct: 1602103 accgtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 1602044
Query: 360 gagaagggatacactgtgaagggcaccgtcaggaaccc 397
|||||||| ||||| ||| ||||||||| |||||||
Sbjct: 1602043 gagaagggctacaccgtgcgtggcaccgtccggaaccc 1602006
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccga 547
|||||| |||||||||||||| | |||||||||||||||||
Sbjct: 1601776 ggctgcgagggcgtcttccacgctgcctcccccgtcaccga 1601736
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 270 bits (136), Expect = 2e-069
Identities = 291/340 (85%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
|||||||||||||||||| ||||||||||| ||||| | |||||| || |||||
Sbjct: 15023465 gaactggtactgctacggtaaggcggtggcagagcaggaggcgtgcaaggcggccgaaga 15023406
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| ||||| ||||| || || || | ||||||||||||||| ||||| ||||||||| |
Sbjct: 15023405 gcgcggcgtcgacctcgtcgtcgtcagccccgtgctggtggtcggcccgctgctgcagcc 15023346
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||||||| || |||||||||||||||||| |||||||||||| | |
Sbjct: 15023345 gacggtgaacgccagcgccgtgcacatcctcaagtacctcgacggctcggccaagaagta 15023286
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 15023285 cgccaatgccgtgcaggcgtacgtggacgtgcgcgacgtcgcggctgcgcacgtccgcgt 15023226
Query: 983 cttcgagagcccccgcg-cgtccggccgccacctctgcgccgagcgcgtcctccaccgcg 1041
||||||| || || | | | |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 15023225 cttcgag-gcgccggaggcctccggccggcacctctgcgccgagcgcgtcctgcaccgtg 15023167
Query: 1042 aggacgtcgtccgcatcctcgccaagctcttccccgagta 1081
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 15023166 aggacgtcgtccacatcctcggcaagctcttccccgagta 15023127
Score = 262 bits (132), Expect = 5e-067
Identities = 174/188 (92%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||||| || || ||||||||||| || |||||||||||
Sbjct: 15024067 ggagcagatggtggagccggcggtgcgggggacggagtacgtgataaaggcggcggcgga 15024008
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15024007 ggccggcacggtgcgccgggtggtgttcacgtcgtccatcggcgccgtcaccatggaccc 15023948
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||| |||||||| || ||||||||||| |||||||||||||||||||||||| |
Sbjct: 15023947 caaccgcggccccgacgtggtcgtcgacgagtcctgctggagcgacctcgagttctgcaa 15023888
Query: 734 gaaaacca 741
||||||||
Sbjct: 15023887 gaaaacca 15023880
Score = 167 bits (84), Expect = 2e-038
Identities = 138/156 (88%)
Strand = Plus / Minus
Query: 398 agatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcct 457
|||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||||
Sbjct: 15024327 agatgacccgaagaacgcccacctgaaggcgctggacggcgccgacgagaggctggtcct 15024268
Query: 458 ctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccaggg 517
|||||||||||| || || ||||||||| ||||| || |||||| | |||||||| ||
Sbjct: 15024267 ctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacggctgccacgg 15024208
Query: 518 cgtcttccacaccgcctcccccgtcaccgacgaccc 553
||| |||||||||||||||||||||||||| |||||
Sbjct: 15024207 cgtgttccacaccgcctcccccgtcaccgatgaccc 15024172
Score = 135 bits (68), Expect = 8e-029
Identities = 278/348 (79%)
Strand = Plus / Minus
Query: 743 gaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacggcccggcg 802
||||||||||||||||| ||| ||||||||||||| | ||||||||| ||| |||||
Sbjct: 2031063 gaactggtactgctacgcgaagacggtggcggagcagggtgcgtgggaggtggcgcggcg 2031004
Query: 803 gcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgctgcaggc 862
||| || ||||||||||| || |||||||| ||||||||| |||| || |||||||||||
Sbjct: 2031003 gcgtggggtggacctggtcgtagtgaacccggtgctggtgctgggaccgctgctgcaggc 2030944
Query: 863 gacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggcccgcacctt 922
|||||||||||| |||| | |||| | | ||||||||| || |||||| || |
Sbjct: 2030943 gacggtgaacgcgagcacggagcacgtgatgaagtacctgacggggtcggccaagacgta 2030884
Query: 923 cgccaacgccgtgcaggcgtacgtggacgtgcgcgacgtggccgacgcgcacctccgcgt 982
|| ||||| | |||||||||||| |||| |||||||| ||||| |||||| |||||||
Sbjct: 2030883 cgtgaacgcagcgcaggcgtacgtccacgtccgcgacgtcgccgaggcgcacgtccgcgt 2030824
Query: 983 cttcgagagcccccgcgcgtccggccgccacctctgcgccgagcgcgtcctccaccgcga 1042
| ||| || | ||||| ||||| || ||||||||||| || ||| |||||||
Sbjct: 2030823 gtacgactgcggcggcgcgcggggccggtacatctgcgccgagagcaccctgcaccgcgg 2030764
Query: 1043 ggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtccc 1090
||| || |||| |||||||||||| ||||| ||||||||||||||
Sbjct: 2030763 cgacctctgccgcgccctcgccaagcttttcccggagtaccccgtccc 2030716
Score = 91.7 bits (46), Expect = 1e-015
Identities = 118/142 (83%)
Strand = Plus / Minus
Query: 1093 ccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccagaagc 1152
|||||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||
Sbjct: 15021957 ccaggtgctctgacgaggtgaacccacggaagcagccgtacaagatgtccaacaagaagc 15021898
Query: 1153 tccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtgaaga 1212
| | ||| || || || || ||| || || ||| | ||||| ||||| ||||||||||
Sbjct: 15021897 tgcaggatcttggcctccacttcatacctgtgagcgactcgctctacgagacggtgaaga 15021838
Query: 1213 acctccaggagaagggacacct 1234
||||||||||||||| |||||
Sbjct: 15021837 gcctccaggagaaggggcacct 15021816
Score = 83.8 bits (42), Expect = 3e-013
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 15024569 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 15024510
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||
Sbjct: 15024509 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccag 15024456
Score = 60.0 bits (30), Expect = 4e-006
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 300 accgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctc 359
||||||||||| |||||||| | ||||| |||||| |||||| | || |||| || |||
Sbjct: 2033016 accgtgtgcgtcaccggcgccggcgggttcatcgcgtcgtggctcgtcaagcgcctcctc 2032957
Query: 360 gagaagggatacactgtgaagggcaccgtcaggaaccc 397
|||||||| ||||| ||| ||||||||| |||||||
Sbjct: 2032956 gagaagggctacaccgtgcgtggcaccgtccggaaccc 2032919
Score = 58.0 bits (29), Expect = 1e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 507 ggctgccagggcgtcttccacaccgcctcccccgtcaccga 547
|||||| |||||||||||||| | |||||||||||||||||
Sbjct: 2032689 ggctgcgagggcgtcttccacgctgcctcccccgtcaccga 2032649
>gb|D46355.1|D46355 RICS10974A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 413
Score = 262 bits (132), Expect = 5e-067
Identities = 283/332 (85%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||||||||||||| |||||| | |
Sbjct: 79 cggggcacggccaaacggtgtgtgtcaccggcgccgccgggtacatcgcgtcgtggctcg 138
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 139 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 198
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccg-ccgagcggctgatcctctgcaag 464
|||||||||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 199 cgaagaacgcccacctgaaggcgctggacggcgccgaccgagaggctggtcctctgcaag 258
Query: 465 gccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagggcgtcttc 524
||||| || || ||||||||| ||||| || ||||||| | || | || ||||| |||
Sbjct: 259 gccgacctcctcgactacgactccatccgcggcgccgtcgacggttnncacggcgtgttc 318
Query: 525 cacaccgcctcccccgtcaccgacgacccggagcaaatggtggagccggcggtgcgcggc 584
|||| || ||||||||||||||| ||||| ||||| |||||||||||| ||||||| ||
Sbjct: 319 cacaacgnctcccccgtcaccgatgaccctgagcagatggtggagccgtcggtgcggggg 378
Query: 585 accgagtacgtgatcaacgcggcggcggaggc 616
| |||| ||||||| || ||||||||||||||
Sbjct: 379 a-cgagnacgtgataaaggcggcggcggaggc 409
>gb|AU094766.1|AU094766 AU094766 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31533, mRNA sequence
Length = 494
Score = 246 bits (124), Expect = 3e-062
Identities = 193/217 (88%)
Strand = Plus / Plus
Query: 1029 gtcctccaccgcgaggacgtcgtccgcatcctcgccaagctcttccccgagtaccccgtc 1088
|||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 13 gtcctcnaccgcgagggtgtcgtccgnatcctcgccaagctcttccccgagtaccctgtc 72
Query: 1089 ccagccaggtgctccgacgaggtgaatccgcggaagcagccgtacaagttctccaaccag 1148
|| ||||||||||||||||| ||| || ||||||||||||||||| | || ||||||
Sbjct: 73 cccaccaggtgctccgacgagaagaaccccaggaagcagccgtacaagatgtcgaaccag 132
Query: 1149 aagctccgggacctggggctgcagttccggccggtcagccagtcgctttacgacacggtg 1208
||||||||||||||||||||| |||||||||||| ||| ||||||| ||||| ||||||
Sbjct: 133 aagctccgggacctggggctggagttccggccggcgagcnagtcgctgtacgagacggtg 192
Query: 1209 aagaacctccaggagaagggacacctgccggtgctcg 1245
||| ||||||||||||||| ||||||||||||||||
Sbjct: 193 aagtgcctccaggagaagggccacctgccggtgctcg 229
>gb|D49081.2|D49081 RICS15730A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 269
Score = 244 bits (123), Expect = 1e-061
Identities = 225/255 (88%), Gaps = 3/255 (1%)
Strand = Plus / Plus
Query: 736 aaaccaggaactggtactgctacggcaaggcggtggcggagcacgcggcgtgggagacgg 795
||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||| |||
Sbjct: 7 aaaccaggaactgttactgctacgggaaggcggtggcggag-aggcggcgtgggaggcgg 65
Query: 796 cccggcggcggggcgtggacctggtggtggtgaaccccgtgctggtggtgggccccctgc 855
| |||||||| || ||||| ||||||||||||||||| ||||||||| | || || ||||
Sbjct: 66 cgcggcggcgaggggtggagctggtggtggtgaacccggtgctggtgatcgggccgctgc 125
Query: 856 tgcaggcgacggtgaacgccagcatcgcgcacatcctcaagtacctggacggctcggccc 915
||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 126 tgcagccgacggtgaacgccagcgtcgc-cacatcctcaagtacctggacggctcggcca 184
Query: 916 gcaccttcgccaacgccgtgcaggcgtacgtggacgtgcgcgacgt-ggccgacgcgcac 974
||| |||||||||| ||| ||||| ||||| ||||| |||||||| | | ||||| |||
Sbjct: 185 gcaagttcgccaacgtcgtccaggcctacgtcgacgtccgcgacgtcgtcggacgcccac 244
Query: 975 ctccgcgtcttcgag 989
|||| ||||||||||
Sbjct: 245 ctcctcgtcttcgag 259
>gb|AACV01018568.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018568,
whole genome shotgun sequence
Length = 8330
Score = 242 bits (122), Expect = 5e-061
Identities = 173/190 (91%)
Strand = Plus / Minus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 797 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 738
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 737 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 678
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacctcgagttctgcga 733
||| ||||||||||||||||| ||||||||||| |||||||||||||| || | |||| |
Sbjct: 677 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgaccttgactactgcaa 618
Query: 734 gaaaaccagg 743
| ||||||||
Sbjct: 617 ggaaaccagg 608
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 1121 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 1062
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 1061 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 1002
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 1001 gcgtcttccacaccgcctcccccgtcaccgacgaccc 965
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 1326 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 1267
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1266 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 1213
>dbj|AK102061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D10, full
insert sequence
Length = 1090
Score = 238 bits (120), Expect = 7e-060
Identities = 156/168 (92%)
Strand = Plus / Plus
Query: 554 ggagcaaatggtggagccggcggtgcgcggcaccgagtacgtgatcaacgcggcggcgga 613
|||||| |||||||||||||||||| | || || ||||||||||| ||||||||||||||
Sbjct: 766 ggagcagatggtggagccggcggtgagggggacggagtacgtgataaacgcggcggcgga 825
Query: 614 ggccggcacggtgcggcgggtggtgttcacgtcgtccatcggcgccgtgaccatggaccc 673
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 826 ggccggcacggtgcggcgggtggtgttcacgtcgtcgatcggggcggtgaccatggaccc 885
Query: 674 caagcgcgggcccgacgtcgtggtcgacgagtcgtgctggagcgacct 721
||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 886 caaccgcgggcccgacgtcgtcgtcgacgagtcctgctggagcgacct 933
Score = 208 bits (105), Expect = 7e-051
Identities = 144/157 (91%)
Strand = Plus / Plus
Query: 397 cagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcc 456
||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |
Sbjct: 440 cagatgacccgaagaacgcgcacctgaaggcgctcgacggcgccggcgagcggctggtgc 499
Query: 457 tctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagggctgccagg 516
||||||||||||| || || |||||||||||||||||||||||||| |||||||| |
Sbjct: 500 tctgcaaggccgacctcctcgactacgacgccatctgccgcgccgtcgccggctgccacg 559
Query: 517 gcgtcttccacaccgcctcccccgtcaccgacgaccc 553
|||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcgtcttccacaccgcctcccccgtcaccgacgaccc 596
Score = 178 bits (90), Expect = 6e-042
Identities = 108/114 (94%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct: 235 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggctcg 294
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccag 399
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 295 tgaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccag 348
>gb|AU197607.1|AU197607 AU197607 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1554, mRNA sequence
Length = 449
Score = 232 bits (117), Expect = 5e-058
Identities = 174/193 (90%)
Strand = Plus / Plus
Query: 1053 cgcatcctcgccaagctcttccccgagtaccccgtcccagccaggtgctccgacgaggtg 1112
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 1 cgcatcctcgccaagctcttccccgagtaccctgtccccaccaggtgctccgacgagaag 60
Query: 1113 aatccgcggaagcagccgtacaagttctccaaccagaagctccgggacctggggctgcag 1172
|| || ||||||||||||||||| | || ||||||||||||||||||||||||||| ||
Sbjct: 61 aaccccaggaagcagccgtacaagatgtcgaaccagaagctccgggacctggggctggag 120
Query: 1173 ttccggccggtcagccagtcgctttacgacacggtgaagaacctccaggagaagggacac 1232
|||||||||| ||||||||||| ||||| ||||||||| ||||||||||||||| |||
Sbjct: 121 ttccggccggcgagccagtcgctgtacgagacggtgaagtgcctccaggagaagggccac 180
Query: 1233 ctgccggtgctcg 1245
|||||||||||||
Sbjct: 181 ctgccggtgctcg 193
>gb|AU184158.1|AU184158 AU184158 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1430, mRNA sequence
Length = 446
Score = 226 bits (114), Expect = 3e-056
Identities = 171/190 (90%)
Strand = Plus / Plus
Query: 1056 atcctcgccaagctcttccccgagtaccccgtcccagccaggtgctccgacgaggtgaat 1115
||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 1 atcctcgccaagctcttccccgagtaccctgtccccaccaggtgctccgacgagaagaac 60
Query: 1116 ccgcggaagcagccgtacaagttctccaaccagaagctccgggacctggggctgcagttc 1175
|| ||||||||||||||||| | || ||||||||||||||||||||||||||| |||||
Sbjct: 61 cccaggaagcagccgtacaagatgtcgaaccagaagctccgggacctggggctggagttc 120
Query: 1176 cggccggtcagccagtcgctttacgacacggtgaagaacctccaggagaagggacacctg 1235
||||||| ||||||||||| ||||| ||||||||| ||||||||||||||| ||||||
Sbjct: 121 cggccggcgagccagtcgctgtacgagacggtgaagtgcctccaggagaagggccacctg 180
Query: 1236 ccggtgctcg 1245
||||||||||
Sbjct: 181 ccggtgctcg 190
>gb|AU063857.1|AU063857 AU063857 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1206_1A, mRNA sequence
Length = 383
Score = 216 bits (109), Expect = 3e-053
Identities = 152/164 (92%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 222 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcgtcgtggttcg 281
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 282 tgaagctgctgnttgagaaggg-tacactgtcaagggcaccgtcaggaacccagatgacc 340
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcgg 449
||||||||||| | || |||||| | |||||||||| |||||||
Sbjct: 341 cgaagaacgcg-aactgaaggcgttcgacggcgccggcgagcgg 383
>gb|C91739.1|C91739 C91739 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31447_2A, mRNA sequence
Length = 418
Score = 202 bits (102), Expect = 4e-049
Identities = 165/184 (89%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |
Sbjct: 224 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgg-tacatcgcgtcgtggctcg 282
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
||||| ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 283 tgaagttgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 342
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||||||||| ||| | | | |||||||| ||||||||| | |||| |||||
Sbjct: 343 cgaagaacgcgcacctgaagcngttcg-cggcgccggcgagcggcttgtgctctncaagg 401
Query: 466 ccga 469
||||
Sbjct: 402 ccga 405
>gb|D47839.1|D47839 RICS13560A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 338
Score = 198 bits (100), Expect = 6e-048
Identities = 124/133 (93%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| | |
Sbjct: 206 cggggaacgggcagaccgtgtgcntnaccggcgcggccgggtacatcgcgtcgtggctcg 265
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 266 tnaagctgctgcttgagaagggctacactgtcaagggcaccgtcaggaacccagatgacc 325
Query: 406 cgaagaacgcgca 418
|||||||||||||
Sbjct: 326 cgaagaacgcgca 338
>gb|AU070341.1|AU070341 AU070341 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12055_9A, mRNA sequence
Length = 448
Score = 192 bits (97), Expect = 4e-046
Identities = 220/256 (85%), Gaps = 4/256 (1%)
Strand = Plus / Plus
Query: 328 acatcgcctcgtggttggtgaagctgctgctcgagaagggatacactgtgaagggcaccg 387
||||||| |||||| | || ||||||||||| |||| ||| ||||| ||||||||||| |
Sbjct: 115 acatcgcgtcgtggctcgtcaagctgctgctggagaggggctacaccgtgaagggcacag 174
Query: 388 tcaggaacccagatgacccgaagaacgcgcacctcaaggcgctggacggcgccgccgagc 447
| || ||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Sbjct: 175 tgagaaacccagatgacccgaagaacgcccacctgaaggcgctggacggcg-cgacgaga 233
Query: 448 ggctgatcctctgcaaggccgatctgctggactacgacgccatctgccgcgccgtgcagg 507
||||| |||||||||||||||| || || ||||||||| ||||| || |||||| | |
Sbjct: 234 ggctggtcctctgcaaggccgacctcctcgactacgactccatccgcgccgccgtcgacg 293
Query: 508 gctgccagggcgtcttccacaccgcctcccccgtc-accgacgaccc-ggagcaaatggt 565
||||||| ||||| ||||||||||||||||||||| ||||| ||||| | |||| |||||
Sbjct: 294 gctgccacggcgtgttccacaccgcctcccccgtcaaccgatgaccctgaagcagatggt 353
Query: 566 ggagcc-ggcggtgcg 580
||| || |||||||||
Sbjct: 354 gganccaggcggtgcg 369
>gb|AU222675.1|AU222675 AU222675 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S11643, mRNA sequence
Length = 444
Score = 186 bits (94), Expect = 2e-044
Identities = 153/173 (88%)
Strand = Plus / Plus
Query: 1071 ttccccgagtaccccgtcccagccaggtgctccgacgaggtgaatccgcggaagcagccg 1130
|||||||||||||| ||||| ||||||||||||||||| ||| || |||||||||||
Sbjct: 3 ttccccgagtaccctgtccccaccaggtgctccgacgagaagaaccccaggaagcagccg 62
Query: 1131 tacaagttctccaaccagaagctccgggacctggggctgcagttccggccggtcagccag 1190
|||||| | || ||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 63 tacaagatgtcgaaccagaagctccgggacctggggctggagttccggccggcgagccag 122
Query: 1191 tcgctttacgacacggtgaagaacctccaggagaagggacacctgccggtgct 1243
||||| ||||| ||||||||| ||||||||||||||| | ||||||||||||
Sbjct: 123 tcgctgtacgagacggtgaagtgcctccaggagaagggccncctgccggtgct 175
>gb|D40444.1|D40444 RICS2431A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 421
Score = 176 bits (89), Expect = 2e-041
Identities = 172/200 (86%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||| |||| || || ||||| || |||||||| |||| ||||||||| |||||| | |
Sbjct: 81 cggggcacggccaaacggtgtgtgtcaccggcgccgccgngtacatcgcgtcgtggctcg 140
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccagatgacc 405
| ||||||||||| |||| ||| ||||| ||||||||||| || || |||||||||||||
Sbjct: 141 tcaagctgctgctggagaggggctacaccgtgaagggcacagtgagaaacccagatgacc 200
Query: 406 cgaagaacgcgcacctcaaggcgctggacggcgccgccgagcggctgatcctctgcaagg 465
|||||||||| ||||| ||||||||||||||||||| |||| || || ||||||||||||
Sbjct: 201 cgaagaacgcccacctgaaggcgctggacggcgccgacgagaggttggtcctctgcaagg 260
Query: 466 ccgatctgctggactacgac 485
|||| || || |||||||||
Sbjct: 261 ccgacctcctcgactacgac 280
>gb|D40241.1|D40241 RICS2074A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 279
Score = 174 bits (88), Expect = 9e-041
Identities = 150/171 (87%)
Strand = Plus / Plus
Query: 312 accggcgcggccgggtacatcgcctcgtggttggtgaagctgctgctcgagaagggatac 371
|||||||| ||||| |||||||| |||||| | || ||||||||||| |||| ||| |||
Sbjct: 109 accggcgccgccggntacatcgcgtcgtggctcgtcaagctgctgctggagaggggctac 168
Query: 372 actgtgaagggcaccgtcaggaacccagatgacccgaagaacgcgcacctcaaggcgctg 431
|| ||||||||||| || || ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 169 accgtgaagggcacagtgagaaacccagatgacccgaagaacgcccacctgaaggcgctg 228
Query: 432 gacggcgccgccgagcggctgatcctctgcaaggccgatctgctggactac 482
|||||||||| |||| ||||| |||||||||||||||| || || ||||||
Sbjct: 229 gacggcgccgacgagaggctggtcctctgcaaggccgacctcctcgactac 279
>gb|D24952.1|D24952 RICR2837A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2837_1A, mRNA sequence
Length = 351
Score = 163 bits (82), Expect = 3e-037
Identities = 112/121 (92%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 291 aacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttggtgaag 350
||||||||||||||||||||||||||||||| || ||||||||| |||||| | ||||||
Sbjct: 231 aacgggcagaccgtgtgcgtgaccggcgcggncgtgtacatcgcgtcgtggctcgtgaag 290
Query: 351 ctgctgctcgagaa-gggatacactgtgaagggcaccgtcaggaacccagatgacccgaa 409
|||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 291 ctgctgcttgagaaggggctacactgtcaagggcaccgtcaggaacccagatgacccgaa 350
Query: 410 g 410
|
Sbjct: 351 g 351
>gb|AU064487.1|AU064487 AU064487 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31533_1A, mRNA sequence
Length = 339
Score = 145 bits (73), Expect = 8e-032
Identities = 104/115 (90%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | |
Sbjct: 222 cggggaacgggcagancgtgtgcgtnaccggcgcggccgggtacatcgcgtcgtggctcg 281
Query: 346 tgaagctgctgctcgagaagggatacactgtgaagggcaccgtcaggaacccaga 400
||||||||||||| |||||||| || ||||| ||||||||||||| | |||||||
Sbjct: 282 tgaagctgctgcttgagaagggctaaactgttaagggcaccgtcaaggacccaga 336
>gb|D46765.1|D46765 RICS11643A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 365
Score = 143 bits (72), Expect = 3e-031
Identities = 121/135 (89%), Gaps = 2/135 (1%)
Strand = Plus / Plus
Query: 286 cggggaacgggcagaccgtgtgcgtgaccggcgcggccgggtacatcgcctcgtggttgg 345
||||||||||||||||||||||||| ||||||||||| || |||||||| |||||| | |
Sbjct: 222 cggggaacgggcagaccgtgtgcgtnaccggcgcggcgggttacatcgcgtcgtggctcg 281
Query: 346 tgaagctgctgc-tcgagaagggatacactgtgaagggcaccgtcaggaacccagatgac 404
|||||||||| | | |||||||| |||||||| ||||||||| ||| |||||||||||||
Sbjct: 282 tgaagctgcttctttgagaagggctacactgtcaagggcacc-tcaagaacccagatgac 340
Query: 405 ccgaagaacgcgcac 419
|||||||||| ||||
Sbjct: 341 ccgaagaacgggcac 355
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,666,176
Number of Sequences: 438736
Number of extensions: 2666176
Number of successful extensions: 25672
Number of sequences better than 0.5: 154
Number of HSP's better than 0.5 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23688
Number of HSP's gapped (non-prelim): 1906
length of query: 1520
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1499
effective length of database: 2,791,206,460
effective search space: 4184018483540
effective search space used: 4184018483540
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)