BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969966.2.1
(1029 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_474307.1| Oryza sativa (japonica cultivar-group), p... 955 0.0
dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA... 948 0.0
dbj|AK067150.1| Oryza sativa (japonica cultivar-group) cDNA... 444 e-122
gb|C98780.1|C98780 C98780 Rice panicle at flowering stage O... 387 e-105
gb|AACV01010647.1| Oryza sativa (japonica cultivar-group) c... 272 4e-070
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 272 4e-070
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 272 4e-070
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 272 4e-070
emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC... 272 4e-070
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 272 4e-070
dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA... 147 1e-032
dbj|AK104920.1| Oryza sativa (japonica cultivar-group) cDNA... 147 1e-032
dbj|AG020806.1| Oryza sativa (japonica cultivar-group) DNA,... 96 5e-017
dbj|AK065025.1| Oryza sativa (japonica cultivar-group) cDNA... 88 1e-014
dbj|AK121703.1| Oryza sativa (japonica cultivar-group) cDNA... 88 1e-014
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 86 4e-014
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 86 4e-014
gb|AACV01025520.1| Oryza sativa (japonica cultivar-group) c... 86 4e-014
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-014
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-014
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 86 4e-014
gb|AU055708.1|AU055708 AU055708 Oryza sativa mature leaf Ni... 72 7e-010
dbj|AK100167.1| Oryza sativa (japonica cultivar-group) cDNA... 68 1e-008
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP003728.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
dbj|AP004989.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AACV01014791.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CB639520.1|CB639520 OSJNEa10P12.f OSJNEa Oryza sativa (j... 66 4e-008
dbj|AK070569.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-008
ref|XM_464221.1| Oryza sativa (japonica cultivar-group), mRNA 66 4e-008
ref|XM_506725.1| PREDICTED Oryza sativa (japonica cultivar-... 66 4e-008
dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AP004093.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP004863.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01003410.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 52 6e-004
dbj|AP004324.2| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP003726.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AACV01014877.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
dbj|AK066725.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|CB638688.1|CB638688 OSJNEa07E15.f OSJNEa Oryza sativa (j... 48 0.010
gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (j... 44 0.15
gb|CB662485.1|CB662485 OSJNEd06I21.f OSJNEd Oryza sativa (j... 44 0.15
gb|CF303595.1|CF303595 ABF1--02-L06.g1 ABF3-overexpressing ... 44 0.15
gb|CF306138.1|CF306138 HDA1--02-M21.g1 OsHDAC1-overexpressi... 44 0.15
gb|CF307118.1|CF307118 HDA1--05-M22.g1 OsHDAC1-overexpressi... 44 0.15
gb|CF326153.1|CF326153 JMT1--05-D24.g1 AtJMT-overexpressing... 44 0.15
gb|CF326332.1|CF326332 JMT1--05-M08.g1 AtJMT-overexpressing... 44 0.15
dbj|AP004682.1| Oryza sativa (japonica cultivar-group) chro... 44 0.15
dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK103327.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
gb|AC109645.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
ref|NT_107088.1| Oryza sativa (japonica cultivar-group) chr... 44 0.15
dbj|AP003510.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|AC150702.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|AACV01002980.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01013222.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01023253.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 44 0.15
ref|NM_189992.1| Oryza sativa (japonica cultivar-group), p... 44 0.15
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 44 0.15
dbj|AP004332.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
>ref|XM_474307.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2457
Score = 955 bits (482), Expect = 0.0
Identities = 875/1006 (86%)
Strand = Plus / Plus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 603 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 662
Query: 80 catatggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagac 139
||||||||| ||||||||||||||||| |||||||| |||| || | |||||||||||
Sbjct: 663 catatggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagac 722
Query: 140 tgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagc 199
||||||||| || ||||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 723 tgtgatgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagc 782
Query: 200 agctcatgctgctgcaacaaacagccgcttcacaattttctataatcctagggcaagtcc 259
||||||||||||||| ||||||||||| ||||| |||||||| || || ||||||||||
Sbjct: 783 agctcatgctgctgctacaaacagccgtttcactattttctacaacccccgggcaagtcc 842
Query: 260 aacagaatttgttatacccctttcgaaatacatcaaggctgtttttcacacgcggatatc 319
| |||||||||| ||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 843 atcagaatttgtcataccactgtcaaaatacatcaaggctgtttttcacacccggatatc 902
Query: 320 agttgggatgcgattcaggatgttatttgagactgaggaatcaagtgtccgcaggtacat 379
||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| ||
Sbjct: 903 ggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgttcgcaggtatat 962
Query: 380 ggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttcctattggag 439
|||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 963 ggggactataactgaagttagtgatgcagacccagtccgttggcctagttcctattggag 1022
Query: 440 atcagtgaaggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctct 499
||| |||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||| |
Sbjct: 1023 atctgtgaaggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttcttt 1082
Query: 500 gtgggaaattgagccactgacaacctttcctatgtatccatccctgttcccactgcgagt 559
||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 1083 atgggaaattgaaccattgacaacctttccaatgtatccatctctgttcccactgagagt 1142
Query: 560 taagcatccttggtattcaggacttgctgctcttcatgatgacagcaatgctttgatgtg 619
|||||||||||||||||||||| ||||| | || |||||||||||||||||||| |||||
Sbjct: 1143 taagcatccttggtattcaggagttgcttccctgcatgatgacagcaatgctttaatgtg 1202
Query: 620 gctgagaggagtaaccggtgaagggggctttcattcttcgaacttccagtcacctggtat 679
|||||||||||| | ||||| || || ||||| ||| |||||| ||||||||||||||
Sbjct: 1203 gctgagaggagttgctggtgagggaggttttcagtctctgaactttcagtcacctggtat 1262
Query: 680 aggttcctggggacaacagagactccatccatccttacttagcaatgaccatgatcagta 739
|| ||||||||||||||||| ||||||||||||||||| |||| || || ||||||||
Sbjct: 1263 tggctcctggggacaacagaggctccatccatccttactgagcagcgatcacgatcagta 1322
Query: 740 tcaagcagtggttgctgccgcagctgcctcccagtccggtggttatctgaagcagcaatt 799
|||||||| |||||||| || ||||| ||||| || |||||||| | || ||||||||
Sbjct: 1323 ccaagcagtagttgctgctgctgctgcttcccaatctggtggttacttaaaacagcaatt 1382
Query: 800 cctacaccttcaacaacctatgcagtccccacaggagcagtgcaatctcaatccgctgtt 859
| | |||||||| ||||||||||||||||| || || || ||||| ||||| || | ||
Sbjct: 1383 cttgcaccttcagcaacctatgcagtcccctcaagaacactgcaacctcaacccattatt 1442
Query: 860 gcagcaacaaatactacagcaagcgagccaacagcagatggttagttctgatgctcaaaa 919
|||||||||||| || |||||||| ||||| || ||||| ||| | ||||||| |||||
Sbjct: 1443 gcagcaacaaattctgcagcaagcaagccagcaacagataattaatcctgatgcccaaaa 1502
Query: 920 tattcagtccgtgctcaacccaggtgctattcagcagcagctccaccaactccagcagat 979
||| || | || | | |||| ||||||| || ||||| ||||| ||||| ||||| ||
Sbjct: 1503 tatccaaacgatgttgagcccaagtgctatacaacagcaactccagcaactacagcaaat 1562
Query: 980 gcagcatactcataatgaccagaagcaaaagattcaaccagatcaa 1025
|||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1563 gcagcaagttcagaatgatcagaagcagaagattcaaccagatcaa 1608
>dbj|AK071455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B04, full
insert sequence
Length = 3262
Score = 948 bits (478), Expect = 0.0
Identities = 874/1006 (86%)
Strand = Plus / Plus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 938 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 997
Query: 80 catatggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagac 139
||||||||| ||||||||||||||||| |||||||| |||| || | |||||||||||
Sbjct: 998 catatggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagac 1057
Query: 140 tgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagc 199
||||||||| || ||||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 1058 tgtgatgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagc 1117
Query: 200 agctcatgctgctgcaacaaacagccgcttcacaattttctataatcctagggcaagtcc 259
||||||||||||||| ||||||||||| ||||| |||||||| || || ||||||||||
Sbjct: 1118 agctcatgctgctgctacaaacagccgtttcactattttctacaacccccgggcaagtcc 1177
Query: 260 aacagaatttgttatacccctttcgaaatacatcaaggctgtttttcacacgcggatatc 319
| |||||||||| ||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct: 1178 atcagaatttgtcataccactgtcaaaatacatcaaggctgtttttcacacccggatatc 1237
Query: 320 agttgggatgcgattcaggatgttatttgagactgaggaatcaagtgtccgcaggtacat 379
||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| ||
Sbjct: 1238 ggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgttcgcaggtatat 1297
Query: 380 ggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttcctattggag 439
|||||| ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1298 ggggactataactgaagttagtgatgcagacccagtccgttggcctagttcctattggag 1357
Query: 440 atcagtgaaggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctct 499
||| |||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||| |
Sbjct: 1358 atctgtgaaggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttcttt 1417
Query: 500 gtgggaaattgagccactgacaacctttcctatgtatccatccctgttcccactgcgagt 559
||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 1418 atgggaaattgaaccattgacaacctttccaatgtatccatctctgttcccactgagagt 1477
Query: 560 taagcatccttggtattcaggacttgctgctcttcatgatgacagcaatgctttgatgtg 619
|||||||||||||||||||||| ||||| | || |||||||||||||||||||| |||||
Sbjct: 1478 taagcatccttggtattcaggagttgcttccctgcatgatgacagcaatgctttaatgtg 1537
Query: 620 gctgagaggagtaaccggtgaagggggctttcattcttcgaacttccagtcacctggtat 679
|||||||||||| | ||||| || || ||||| ||| |||||| ||||||||||||||
Sbjct: 1538 gctgagaggagttgctggtgagggaggttttcagtctctgaactttcagtcacctggtat 1597
Query: 680 aggttcctggggacaacagagactccatccatccttacttagcaatgaccatgatcagta 739
|| ||||||||||||||||| ||||||||||||||||| |||| || || ||||||||
Sbjct: 1598 tggctcctggggacaacagaggctccatccatccttactgagcagcgatcacgatcagta 1657
Query: 740 tcaagcagtggttgctgccgcagctgcctcccagtccggtggttatctgaagcagcaatt 799
|||||||| |||||||| || ||||| ||||| || |||||||| | || |||||| |
Sbjct: 1658 ccaagcagtagttgctgctgctgctgcttcccaatctggtggttacttaaaacagcaact 1717
Query: 800 cctacaccttcaacaacctatgcagtccccacaggagcagtgcaatctcaatccgctgtt 859
| | |||||||| ||||||||||||||||| || || || ||||| ||||| || | ||
Sbjct: 1718 cttgcaccttcagcaacctatgcagtcccctcaagaacactgcaacctcaacccattatt 1777
Query: 860 gcagcaacaaatactacagcaagcgagccaacagcagatggttagttctgatgctcaaaa 919
|||||||||||| || |||||||| ||||| || ||||| ||| | ||||||| |||||
Sbjct: 1778 gcagcaacaaattctgcagcaagcaagccagcaacagataattaatcctgatgcccaaaa 1837
Query: 920 tattcagtccgtgctcaacccaggtgctattcagcagcagctccaccaactccagcagat 979
||| || | || | | |||| ||||||| || ||||| ||||| ||||| ||||| ||
Sbjct: 1838 tatccaaacgatgttgagcccaagtgctatacaacagcaactccagcaactacagcaaat 1897
Query: 980 gcagcatactcataatgaccagaagcaaaagattcaaccagatcaa 1025
|||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct: 1898 gcagcaagttcagaatgatcagaagcagaagattcaaccagatcaa 1943
>dbj|AK067150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O18, full
insert sequence
Length = 1810
Score = 444 bits (224), Expect = e-122
Identities = 488/576 (84%)
Strand = Plus / Plus
Query: 450 gttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaatt 509
|||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||||
Sbjct: 2 gttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaatt 61
Query: 510 gagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatcct 569
|| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 62 gaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatcct 121
Query: 570 tggtattcaggacttgctgctcttcatgatgacagcaatgctttgatgtggctgagagga 629
|||||||||||| ||||| | || |||||||||||||||||||| |||||||||||||||
Sbjct: 122 tggtattcaggagttgcttccctgcatgatgacagcaatgctttaatgtggctgagagga 181
Query: 630 gtaaccggtgaagggggctttcattcttcgaacttccagtcacctggtataggttcctgg 689
|| | ||||| || || ||||| ||| |||||| |||||||||||||| || ||||||
Sbjct: 182 gttgctggtgagggaggttttcagtctctgaactttcagtcacctggtattggctcctgg 241
Query: 690 ggacaacagagactccatccatccttacttagcaatgaccatgatcagtatcaagcagtg 749
||||||||||| ||||||||||||||||| |||| || || |||||||| ||||||||
Sbjct: 242 ggacaacagaggctccatccatccttactgagcagcgatcacgatcagtaccaagcagta 301
Query: 750 gttgctgccgcagctgcctcccagtccggtggttatctgaagcagcaattcctacacctt 809
|||||||| || ||||| ||||| || |||||||| | || ||||||||| | ||||||
Sbjct: 302 gttgctgctgctgctgcttcccaatctggtggttacttaaaacagcaattcttgcacctt 361
Query: 810 caacaacctatgcagtccccacaggagcagtgcaatctcaatccgctgttgcagcaacaa 869
|| ||||||||||||||||| || || || ||||| ||||| || | ||||||||||||
Sbjct: 362 cagcaacctatgcagtcccctcaagaacactgcaacctcaacccattattgcagcaacaa 421
Query: 870 atactacagcaagcgagccaacagcagatggttagttctgatgctcaaaatattcagtcc 929
|| || |||||||| ||||| || ||||| ||| | ||||||| |||||||| || |
Sbjct: 422 attctgcagcaagcaagccagcaacagataattaatcctgatgcccaaaatatccaaacg 481
Query: 930 gtgctcaacccaggtgctattcagcagcagctccaccaactccagcagatgcagcatact 989
|| | | |||| ||||||| || ||||| ||||| ||||| ||||| |||||||| |
Sbjct: 482 atgttgagcccaagtgctatacaacagcaactccagcaactacagcaaatgcagcaagtt 541
Query: 990 cataatgaccagaagcaaaagattcaaccagatcaa 1025
|| ||||| |||||||| ||||||||||||||||||
Sbjct: 542 cagaatgatcagaagcagaagattcaaccagatcaa 577
>gb|C98780.1|C98780 C98780 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3089_1A, mRNA sequence
Length = 461
Score = 387 bits (195), Expect = e-105
Identities = 297/331 (89%)
Strand = Plus / Plus
Query: 393 gaagtgagtgatgctgacccagtgcgttggcctagttcctattggagatcagtgaaggtt 452
||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 5 gaagttagtgatgcagacccagtccgttggcctagttcctattggagatctgtgaaggtt 64
Query: 453 ggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaattgag 512
||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||||||
Sbjct: 65 ggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaattgaa 124
Query: 513 ccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatccttgg 572
||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 125 ccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatccttgg 184
Query: 573 tattcaggacttgctgctcttcatgatgacagcaatgctttgatgtggctgagaggagta 632
||||||||| ||||| | || |||||||||||||||||||| |||||||||||||||||
Sbjct: 185 tattcaggagttgcttccctgcatgatgacagcaatgctttaatgtggctgagaggagtt 244
Query: 633 accggtgaagggggctttcattcttcgaacttccagtcacctggtataggttcctgggga 692
| ||||| || || ||||| ||| |||||| |||||||||||||| || |||||||||
Sbjct: 245 gctggtgagggaggttttcagtctctgaactttcagtcacctggtattggctcctgggga 304
Query: 693 caacagagactccatccatccttacttagca 723
|||||||| ||||||||||||||||| ||||
Sbjct: 305 caacagaggctccatccatccttactgagca 335
>gb|AACV01010647.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010647, whole
genome shotgun sequence
Length = 28129
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 18048 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 17989
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 17988 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 17929
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 17928 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 17869
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 17868 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 17809
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 17808 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 17749
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 17748 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 17689
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 17688 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 17629
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 17628 ccagatcaa 17620
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 18806 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 18747
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 18746 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 18687
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 18686 cttggtattcaggagttgct 18667
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 19779 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 19720
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 19719 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 19660
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 19659 atgctgctgctacaaacagccgtttcactattttcta 19623
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 19534 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 19475
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 19474 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 19415
Query: 368 ccgcaggt 375
|||||||
Sbjct: 19414 tcgcaggt 19407
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 19929 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 19870
Query: 80 catatgg 86
|||||||
Sbjct: 19869 catatgg 19863
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 19095 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 19036
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 19035 ctattggagatctgtgaaggt 19015
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 1710506 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 1710447
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 1710446 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 1710387
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 1710386 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 1710327
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 1710326 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 1710267
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 1710266 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 1710207
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 1710206 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 1710147
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 1710146 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 1710087
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 1710086 ccagatcaa 1710078
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 1711264 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 1711205
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 1711204 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 1711145
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 1711144 cttggtattcaggagttgct 1711125
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 1712237 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 1712178
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 1712177 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 1712118
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1712117 atgctgctgctacaaacagccgtttcactattttcta 1712081
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 1711992 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 1711933
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 1711932 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 1711873
Query: 368 ccgcaggt 375
|||||||
Sbjct: 1711872 tcgcaggt 1711865
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1712387 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 1712328
Query: 80 catatgg 86
|||||||
Sbjct: 1712327 catatgg 1712321
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 1711553 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 1711494
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 1711493 ctattggagatctgtgaaggt 1711473
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 11892213 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 11892154
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 11892153 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 11892094
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 11892093 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 11892034
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 11892033 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 11891974
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 11891973 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 11891914
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 11891913 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 11891854
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 11891853 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 11891794
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 11891793 ccagatcaa 11891785
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 11892971 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 11892912
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 11892911 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 11892852
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 11892851 cttggtattcaggagttgct 11892832
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 11893944 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 11893885
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 11893884 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 11893825
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 11893824 atgctgctgctacaaacagccgtttcactattttcta 11893788
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 11893699 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 11893640
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 11893639 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 11893580
Query: 368 ccgcaggt 375
|||||||
Sbjct: 11893579 tcgcaggt 11893572
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11894094 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 11894035
Query: 80 catatgg 86
|||||||
Sbjct: 11894034 catatgg 11894028
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 11893260 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 11893201
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 11893200 ctattggagatctgtgaaggt 11893180
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 31036312 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 31036253
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 31036252 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 31036193
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 31036192 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 31036133
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 31036132 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 31036073
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 31036072 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 31036013
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 31036012 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 31035953
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 31035952 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 31035893
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 31035892 ccagatcaa 31035884
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 31037070 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 31037011
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 31037010 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 31036951
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 31036950 cttggtattcaggagttgct 31036931
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 31038043 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 31037984
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 31037983 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 31037924
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 31037923 atgctgctgctacaaacagccgtttcactattttcta 31037887
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 31037798 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 31037739
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 31037738 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 31037679
Query: 368 ccgcaggt 375
|||||||
Sbjct: 31037678 tcgcaggt 31037671
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 31038193 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 31038134
Query: 80 catatgg 86
|||||||
Sbjct: 31038133 catatgg 31038127
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 31037359 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 31037300
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 31037299 ctattggagatctgtgaaggt 31037279
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
complete sequence
Length = 159894
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 39783 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 39724
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 39723 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 39664
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 39663 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 39604
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 39603 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 39544
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 39543 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 39484
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 39483 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 39424
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 39423 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 39364
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 39363 ccagatcaa 39355
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 40541 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 40482
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 40481 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 40422
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 40421 cttggtattcaggagttgct 40402
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 41514 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 41455
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 41454 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 41395
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 41394 atgctgctgctacaaacagccgtttcactattttcta 41358
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 41269 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 41210
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 41209 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 41150
Query: 368 ccgcaggt 375
|||||||
Sbjct: 41149 tcgcaggt 41142
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 41664 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 41605
Query: 80 catatgg 86
|||||||
Sbjct: 41604 catatgg 41598
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 40830 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 40771
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 40770 ctattggagatctgtgaaggt 40750
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 272 bits (137), Expect = 4e-070
Identities = 356/429 (82%)
Strand = Plus / Minus
Query: 597 gatgacagcaatgctttgatgtggctgagaggagtaaccggtgaagggggctttcattct 656
||||||||||||||||| ||||||||||||||||| | ||||| || || ||||| |||
Sbjct: 34315380 gatgacagcaatgctttaatgtggctgagaggagttgctggtgagggaggttttcagtct 34315321
Query: 657 tcgaacttccagtcacctggtataggttcctggggacaacagagactccatccatcctta 716
|||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 34315320 ctgaactttcagtcacctggtattggctcctggggacaacagaggctccatccatcctta 34315261
Query: 717 cttagcaatgaccatgatcagtatcaagcagtggttgctgccgcagctgcctcccagtcc 776
|| |||| || || |||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct: 34315260 ctgagcagcgatcacgatcagtaccaagcagtagttgctgctgctgctgcttcccaatct 34315201
Query: 777 ggtggttatctgaagcagcaattcctacaccttcaacaacctatgcagtccccacaggag 836
|||||||| | || ||||||||| | |||||||| ||||||||||||||||| || ||
Sbjct: 34315200 ggtggttacttaaaacagcaattcttgcaccttcagcaacctatgcagtcccctcaagaa 34315141
Query: 837 cagtgcaatctcaatccgctgttgcagcaacaaatactacagcaagcgagccaacagcag 896
|| ||||| ||||| || | |||||||||||||| || |||||||| ||||| || |||
Sbjct: 34315140 cactgcaacctcaacccattattgcagcaacaaattctgcagcaagcaagccagcaacag 34315081
Query: 897 atggttagttctgatgctcaaaatattcagtccgtgctcaacccaggtgctattcagcag 956
|| ||| | ||||||| |||||||| || | || | | |||| ||||||| || |||
Sbjct: 34315080 ataattaatcctgatgcccaaaatatccaaacgatgttgagcccaagtgctatacaacag 34315021
Query: 957 cagctccaccaactccagcagatgcagcatactcataatgaccagaagcaaaagattcaa 1016
|| ||||| ||||| ||||| |||||||| ||| ||||| |||||||| |||||||||
Sbjct: 34315020 caactccagcaactacagcaaatgcagcaagttcagaatgatcagaagcagaagattcaa 34314961
Query: 1017 ccagatcaa 1025
|||||||||
Sbjct: 34314960 ccagatcaa 34314952
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
|||||||||||||||||||||| ||||| ||||| ||||| ||||||||| | |||||||
Sbjct: 34316138 aggttggttgggatgaatcaactgcaggggaaagaccaccaagagtttctttatgggaaa 34316079
Query: 508 ttgagccactgacaacctttcctatgtatccatccctgttcccactgcgagttaagcatc 567
|||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 34316078 ttgaaccattgacaacctttccaatgtatccatctctgttcccactgagagttaagcatc 34316019
Query: 568 cttggtattcaggacttgct 587
|||||||||||||| |||||
Sbjct: 34316018 cttggtattcaggagttgct 34315999
Score = 168 bits (85), Expect = 4e-039
Identities = 139/157 (88%)
Strand = Plus / Minus
Query: 85 ggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtga 144
|||| ||||||||||||||||| |||||||| |||| || | ||||||||||||||||
Sbjct: 34317111 ggaacgagaaaaaccagcttttacttggaataagacgtgccagtcggccacagactgtga 34317052
Query: 145 tgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctc 204
|||| || ||||||||||| || || ||||||||||| || |||||||||||||||||||
Sbjct: 34317051 tgccttcctctgttctttcaagcgatagcatgcacataggtctccttgcagcagcagctc 34316992
Query: 205 atgctgctgcaacaaacagccgcttcacaattttcta 241
|||||||||| ||||||||||| ||||| ||||||||
Sbjct: 34316991 atgctgctgctacaaacagccgtttcactattttcta 34316955
Score = 167 bits (84), Expect = 1e-038
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 248 tagggcaagtccaacagaatttgttatacccctttcgaaatacatcaaggctgtttttca 307
||||||||||||| |||||||||| ||||| || || |||||||||||||||||||||||
Sbjct: 34316866 tagggcaagtccatcagaatttgtcataccactgtcaaaatacatcaaggctgtttttca 34316807
Query: 308 cacgcggatatcagttgggatgcgattcaggatgttatttgagactgaggaatcaagtgt 367
||| |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 34316806 cacccggatatcggttgggatgcggttcaggatgttgtttgagactgaggaatcaagcgt 34316747
Query: 368 ccgcaggt 375
|||||||
Sbjct: 34316746 tcgcaggt 34316739
Score = 109 bits (55), Expect = 3e-021
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 34317261 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgctttt 34317202
Query: 80 catatgg 86
|||||||
Sbjct: 34317201 catatgg 34317195
Score = 105 bits (53), Expect = 5e-020
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 371 caggtacatggggacaataacagaagtgagtgatgctgacccagtgcgttggcctagttc 430
|||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||||||
Sbjct: 34316427 caggtatatggggactataactgaagttagtgatgcagacccagtccgttggcctagttc 34316368
Query: 431 ctattggagatcagtgaaggt 451
|||||||||||| ||||||||
Sbjct: 34316367 ctattggagatctgtgaaggt 34316347
>dbj|AK103280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124L19, full
insert sequence
Length = 3731
Score = 147 bits (74), Expect = 1e-032
Identities = 407/518 (78%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcata 83
|||||||| || ||||| ||||| ||||||||||| || || |||||||| ||||| ||
Sbjct: 1306 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatttatc 1365
Query: 84 tggaatgagaaaaaccagcttttgcttggaatcagacacgctacccggccacagactgtg 143
|||||||| || ||||||||| | || ||||| | | |||| ||| ||||| |||||
Sbjct: 1366 tggaatgacaacaaccagcttcttctgggaattcgtcgagctaaccgcccacaaactgtt 1425
Query: 144 atgccctcttctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagct 203
||||| ||||| || || || ||||| |||||||| || || || ||||| || || |||
Sbjct: 1426 atgccatcttcagtcctatctagtgatagcatgcatattggtcttcttgctgcggctgct 1485
Query: 204 catgctgctgcaacaaacagccgcttcacaattttctataatcctagggcaagtccaaca 263
||||||||| ||||||| ||||| || |||||||| ||||| || || ||||| || ||
Sbjct: 1486 catgctgcttcaacaaatagccggtttacaattttttataacccaagagcaagcccttca 1545
Query: 264 gaatttgttatacccctttcgaaatacatcaaggctgtttttcacacgcggatatcagtt 323
|| |||||||| || ||||| ||||| | |||||||| | ||| || || ||||| ||
Sbjct: 1546 gagtttgttatcccactttctaaatatgttaaggctgtatatcatacccgtatatctgtg 1605
Query: 324 gggatgcgattcaggatgttatttgagactgaggaatcaagtgtccgcaggtacatgggg 383
|| ||||| ||||||||| | |||||||| || || |||||||| || || ||||||||
Sbjct: 1606 ggcatgcgtttcaggatgctttttgagacagaagagtcaagtgtacggagatacatgggc 1665
Query: 384 acaataacagaagtgagtgatgctgacccagtgcgttggcctagttcctattggagatca 443
|| ||||||| | | |||||| ||| | | |||||||| | || ||||| | ||
Sbjct: 1666 acgataacaggaattagtgatcttgatgctgctcgttggccaaactcacattggcgttct 1725
Query: 444 gtgaaggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgg 503
|| |||||||| |||||||||||||| || ||||| |||| || || || || || |||
Sbjct: 1726 gtaaaggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgg 1785
Query: 504 gaaattgagccactgacaacctttcctatgtatccatc 541
|| |||||||| ||||||| || || ||||| |||||
Sbjct: 1786 gagattgagcccttgacaactttcccaatgtacccatc 1823
>dbj|AK104920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G04, full
insert sequence
Length = 1542
Score = 147 bits (74), Expect = 1e-032
Identities = 239/294 (81%)
Strand = Plus / Plus
Query: 732 gatcagtatcaagcagtggttgctgccgcagctgcctcccagtccggtggttatctgaag 791
|||||||| |||||||| |||||||| || ||||| ||||| || |||||||| | ||
Sbjct: 2 gatcagtaccaagcagtagttgctgctgctgctgcttcccaatctggtggttacttaaaa 61
Query: 792 cagcaattcctacaccttcaacaacctatgcagtccccacaggagcagtgcaatctcaat 851
||||||||| | |||||||| ||||||||||||||||| || || || ||| | |||||
Sbjct: 62 cagcaattcttgcaccttcagcaacctatgcagtcccctcaagaacactgcgacctcaac 121
Query: 852 ccgctgttgcagcaacaaatactacagcaagcgagccaacagcagatggttagttctgat 911
|| | |||||||||||||| || |||||||| ||||| || ||||| ||| | |||||
Sbjct: 122 ccattattgcagcaacaaattctgcagcaagcaagccagcaacagataattaatcctgat 181
Query: 912 gctcaaaatattcagtccgtgctcaacccaggtgctattcagcagcagctccaccaactc 971
|| |||||||| || | || | | |||| ||||||| || ||||| ||||| |||||
Sbjct: 182 gcccaaaatatccaaacgatgttgagcccaagtgctatacaacagcaactccagcaacta 241
Query: 972 cagcagatgcagcatactcataatgaccagaagcaaaagattcaaccagatcaa 1025
||||| |||||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct: 242 cagcaaatgcagcaagttcagaatgatcagaagcagaagattcaaccagatcaa 295
>dbj|AG020806.1| Oryza sativa (japonica cultivar-group) DNA, clone:H0120_4_105_1A,
3' flanking sequence of Tos17 insertion in rice strain
H0120, genomic survey sequence
Length = 568
Score = 95.6 bits (48), Expect = 5e-017
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 20 cactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgc 75
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cactggctggagcgtttttgtcagtgctaagagacttgttgctggagattctgtgc 568
>dbj|AK065025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G10, full
insert sequence
Length = 3843
Score = 87.7 bits (44), Expect = 1e-014
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 1541 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 1600
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataatcctagggc 253
|||||||||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 1601 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataaccccagggc 1660
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 1899 gtttctctttgggagattgagcctttgacaacctttccgatgta 1942
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcata 83
||||||||||||||||| ||||| || ||||| || || ||||| ||||| |||| ||
Sbjct: 1431 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgttatatttatc 1490
Query: 84 tggaatga 91
||||||||
Sbjct: 1491 tggaatga 1498
>dbj|AK121703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074F07, full
insert sequence
Length = 3878
Score = 87.7 bits (44), Expect = 1e-014
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 1529 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 1588
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataatcctagggc 253
|||||||||||||||||| || ||||| || |||||||| ||||||||||| || |||||
Sbjct: 1589 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataaccccagggc 1648
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 1887 gtttctctttgggagattgagcctttgacaacctttccgatgta 1930
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcata 83
||||||||||||||||| ||||| || ||||| || || ||||| ||||| |||| ||
Sbjct: 1419 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgttatatttatc 1478
Query: 84 tggaatga 91
||||||||
Sbjct: 1479 tggaatga 1486
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 161806
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 72605 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 72664
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 72665 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 72715
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 73282 gtttctctttgggagattgagcctttgacaacctttccgatgta 73325
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 72402 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 72451
>ref|NT_107152.1| Oryza sativa (japonica cultivar-group)
Length = 2853905
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 2210664 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 2210605
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 2210604 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 2210554
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 2209987 gtttctctttgggagattgagcctttgacaacctttccgatgta 2209944
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 2210867 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 2210818
>gb|AACV01025520.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025520, whole
genome shotgun sequence
Length = 10645
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 5331 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 5390
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 5391 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 5441
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 6008 gtttctctttgggagattgagcctttgacaacctttccgatgta 6051
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 5128 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 5177
>gb|CH401282.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000119 genomic
scaffold, whole genome shotgun sequence
Length = 4546750
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 3059973 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 3059914
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 3059913 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 3059863
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 3059296 gtttctctttgggagattgagcctttgacaacctttccgatgta 3059253
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 3060176 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 3060127
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 22243619 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 22243560
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 22243559 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 22243509
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 22242942 gtttctctttgggagattgagcctttgacaacctttccgatgta 22242899
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 22243822 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 22243773
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 26039066 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 26039007
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 26039006 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 26038956
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 26038389 gtttctctttgggagattgagcctttgacaacctttccgatgta 26038346
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 26039269 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 26039220
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 85.7 bits (43), Expect = 4e-014
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 134 acagactgtgatgccctcttctgttctttcgagtgacagcatgcacatcggactccttgc 193
||||||||| ||||||||||| || | || || || |||||||| || || || |||||
Sbjct: 25967242 acagactgttatgccctcttccgtgttgtcaagcgatagcatgcatataggtcttcttgc 25967183
Query: 194 agcagcagctcatgctgctgcaacaaacagccgcttcacaattttctataa 244
|||||||||||||||||| || ||||| || |||||||| |||||||||||
Sbjct: 25967182 agcagcagctcatgctgcagccacaaatagtcgcttcactattttctataa 25967132
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 492 gtttctctgtgggaaattgagccactgacaacctttcctatgta 535
|||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 25966565 gtttctctttgggagattgagcctttgacaacctttccgatgta 25966522
Score = 44.1 bits (22), Expect = 0.15
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||||||||||||||| ||||| || ||||| || || ||||| |||||
Sbjct: 25967445 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaggagactctgt 25967396
>gb|AU055708.1|AU055708 AU055708 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S20009_1A, mRNA sequence
Length = 342
Score = 71.9 bits (36), Expect = 7e-010
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 938 cccaggtgctattcagcagcagctccaccaactccagcagatgcagcatactcataatga 997
|||| ||||||| || ||||| ||||| ||||| ||||| |||||||| ||| |||||
Sbjct: 25 cccaagtgctatacaacagcaactccagcaactacagcaaatgcagcaagttcagaatga 84
Query: 998 ccagaagcaaaagattcaaccagatcaa 1025
|||||||| ||||||||||||||||||
Sbjct: 85 tcagaagcagaagattcaaccagatcaa 112
>dbj|AK100167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022F20, full
insert sequence
Length = 2445
Score = 67.9 bits (34), Expect = 1e-008
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 944 tgctattcagcagcagctccaccaactccagcagatgcagcatactcataatgaccagaa 1003
|||||| || ||||| ||||| ||||| ||||| |||||||| ||| ||||| |||||
Sbjct: 979 tgctatacaacagcaactccagcaactacagcaaatgcagcaagttcagaatgatcagaa 1038
Query: 1004 gcaaaagattcaaccagatcaa 1025
||| ||||||||||||||||||
Sbjct: 1039 gcagaagattcaaccagatcaa 1060
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 5243498 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 5243439
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 5243438 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 5243379
Query: 243 aa 244
||
Sbjct: 5243378 aa 5243377
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 5243715 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 5243660
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 5242840 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 5242781
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 5242780 ttgagcccttgacaactttcccaatgtacccatc 5242747
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710B08
Length = 186991
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 80522 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 80463
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 80462 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 80403
Query: 243 aa 244
||
Sbjct: 80402 aa 80401
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 80739 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 80684
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 79864 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 79805
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 79804 ttgagcccttgacaactttcccaatgtacccatc 79771
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1153E06
Length = 174588
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 127268 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 127209
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 127208 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 127149
Query: 243 aa 244
||
Sbjct: 127148 aa 127147
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 127485 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 127430
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 126610 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 126551
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 126550 ttgagcccttgacaactttcccaatgtacccatc 126517
>gb|AACV01014791.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014791, whole
genome shotgun sequence
Length = 12662
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 9803 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 9744
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 9743 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 9684
Query: 243 aa 244
||
Sbjct: 9683 aa 9682
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 10020 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 9965
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 9145 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 9086
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 9085 ttgagcccttgacaactttcccaatgtacccatc 9052
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 9186364 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 9186305
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 9186304 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 9186245
Query: 243 aa 244
||
Sbjct: 9186244 aa 9186243
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 10569834 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 10569893
Query: 213 gc 214
||
Sbjct: 10569894 gc 10569895
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 9186581 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 9186526
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 9185706 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 9185647
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 9185646 ttgagcccttgacaactttcccaatgtacccatc 9185613
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 26885101 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 26885042
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 26885041 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 26884982
Query: 243 aa 244
||
Sbjct: 26884981 aa 26884980
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 28268571 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 28268630
Query: 213 gc 214
||
Sbjct: 28268631 gc 28268632
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 26885318 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 26885263
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 26884443 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 26884384
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 26884383 ttgagcccttgacaactttcccaatgtacccatc 26884350
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 aggttggttgggatgaatcaac 469
||||||||||||||||||||||
Sbjct: 4774986 aggttggttgggatgaatcaac 4775007
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 67.9 bits (34), Expect = 1e-008
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 123 gctacccggccacagactgtgatgccctcttctgttctttcgagtgacagcatgcacatc 182
|||| ||| ||||| ||||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct: 27778013 gctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatatt 27777954
Query: 183 ggactccttgcagcagcagctcatgctgctgcaacaaacagccgcttcacaattttctat 242
|| || ||||| || || |||||||||||| ||||||| ||||| || |||||||| |||
Sbjct: 27777953 ggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttat 27777894
Query: 243 aa 244
||
Sbjct: 27777893 aa 27777892
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 29144874 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 29144933
Query: 213 gc 214
||
Sbjct: 29144934 gc 29144935
Score = 48.1 bits (24), Expect = 0.010
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctatt 79
|||||||| || ||||| ||||| ||||||||||| || || |||||||| |||||
Sbjct: 27778230 ggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatt 27778175
Score = 44.1 bits (22), Expect = 0.15
Identities = 76/94 (80%)
Strand = Plus / Minus
Query: 448 aggttggttgggatgaatcaaccgcaggagaaaggccacctagagtttctctgtgggaaa 507
||||||| |||||||||||||| || ||||| |||| || || || || || ||||| |
Sbjct: 27777355 aggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggaga 27777296
Query: 508 ttgagccactgacaacctttcctatgtatccatc 541
||||||| ||||||| || || ||||| |||||
Sbjct: 27777295 ttgagcccttgacaactttcccaatgtacccatc 27777262
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 448 aggttggttgggatgaatcaac 469
||||||||||||||||||||||
Sbjct: 4939591 aggttggttgggatgaatcaac 4939612
>gb|CB639520.1|CB639520 OSJNEa10P12.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa10P12 5', mRNA sequence
Length = 596
Score = 65.9 bits (33), Expect = 4e-008
Identities = 180/229 (78%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 259 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 318
Query: 225 cgcttcacaattttctataatcctagggcaagtccaacagaatttgttatacccctttcg 284
|| || || |||||||||||||| || ||||| || | || ||||||||||| || |
Sbjct: 319 cggtttactattttctataatccaagagcaagcccttcggagtttgttataccactggct 378
Query: 285 aaatacatcaaggctgtttttcacacgcggatatcagttgggatgcgattcaggatgtta 344
||||| | |||||||| | || || || ||||| || || ||||| ||| ||||| |
Sbjct: 379 aaatatgtaaaggctgtctaccatacccgcatatcggtgggcatgcgtttccggatgctt 438
Query: 345 tttgagactgaggaatcaagtgtccgcaggtacatggggacaataacag 393
||||| || || ||||| ||||| | || |||||||||||||||||||
Sbjct: 439 tttgaaacagaagaatccagtgttaggagatacatggggacaataacag 487
Score = 50.1 bits (25), Expect = 0.002
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcatatgg 86
||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || || |||
Sbjct: 121 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgtcctttttatctgg 180
Query: 87 aatga 91
|||||
Sbjct: 181 aatga 185
>dbj|AK070569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056C15, full
insert sequence
Length = 3885
Score = 65.9 bits (33), Expect = 4e-008
Identities = 180/229 (78%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 1513 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 1572
Query: 225 cgcttcacaattttctataatcctagggcaagtccaacagaatttgttatacccctttcg 284
|| || || |||||||||||||| || ||||| || | || ||||||||||| || |
Sbjct: 1573 cggtttactattttctataatccaagagcaagcccttcggagtttgttataccactggct 1632
Query: 285 aaatacatcaaggctgtttttcacacgcggatatcagttgggatgcgattcaggatgtta 344
||||| | |||||||| | || || || ||||| || || ||||| ||| ||||| |
Sbjct: 1633 aaatatgtaaaggctgtctaccatacccgcatatcggtgggcatgcgtttccggatgctt 1692
Query: 345 tttgagactgaggaatcaagtgtccgcaggtacatggggacaataacag 393
||||| || || ||||| ||||| | || |||||||||||||||||||
Sbjct: 1693 tttgaaacagaagaatccagtgttaggagatacatggggacaataacag 1741
Score = 50.1 bits (25), Expect = 0.002
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcatatgg 86
||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || || |||
Sbjct: 1375 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgtcctttttatctgg 1434
Query: 87 aatga 91
|||||
Sbjct: 1435 aatga 1439
>ref|XM_464221.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3236
Score = 65.9 bits (33), Expect = 4e-008
Identities = 180/229 (78%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 891 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 950
Query: 225 cgcttcacaattttctataatcctagggcaagtccaacagaatttgttatacccctttcg 284
|| || || |||||||||||||| || ||||| || | || ||||||||||| || |
Sbjct: 951 cggtttactattttctataatccaagagcaagcccttcggagtttgttataccactggct 1010
Query: 285 aaatacatcaaggctgtttttcacacgcggatatcagttgggatgcgattcaggatgtta 344
||||| | |||||||| | || || || ||||| || || ||||| ||| ||||| |
Sbjct: 1011 aaatatgtaaaggctgtctaccatacccgcatatcggtgggcatgcgtttccggatgctt 1070
Query: 345 tttgagactgaggaatcaagtgtccgcaggtacatggggacaataacag 393
||||| || || ||||| ||||| | || |||||||||||||||||||
Sbjct: 1071 tttgaaacagaagaatccagtgttaggagatacatggggacaataacag 1119
Score = 50.1 bits (25), Expect = 0.002
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcatatgg 86
||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || || |||
Sbjct: 753 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgtcctttttatctgg 812
Query: 87 aatga 91
|||||
Sbjct: 813 aatga 817
>ref|XM_506725.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1661_C12.26 mRNA
Length = 3885
Score = 65.9 bits (33), Expect = 4e-008
Identities = 180/229 (78%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 1513 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 1572
Query: 225 cgcttcacaattttctataatcctagggcaagtccaacagaatttgttatacccctttcg 284
|| || || |||||||||||||| || ||||| || | || ||||||||||| || |
Sbjct: 1573 cggtttactattttctataatccaagagcaagcccttcggagtttgttataccactggct 1632
Query: 285 aaatacatcaaggctgtttttcacacgcggatatcagttgggatgcgattcaggatgtta 344
||||| | |||||||| | || || || ||||| || || ||||| ||| ||||| |
Sbjct: 1633 aaatatgtaaaggctgtctaccatacccgcatatcggtgggcatgcgtttccggatgctt 1692
Query: 345 tttgagactgaggaatcaagtgtccgcaggtacatggggacaataacag 393
||||| || || ||||| ||||| | || |||||||||||||||||||
Sbjct: 1693 tttgaaacagaagaatccagtgttaggagatacatggggacaataacag 1741
Score = 50.1 bits (25), Expect = 0.002
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcatatgg 86
||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || || |||
Sbjct: 1375 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgtcctttttatctgg 1434
Query: 87 aatga 91
|||||
Sbjct: 1435 aatga 1439
>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
insert sequence
Length = 3550
Score = 60.0 bits (30), Expect = 3e-006
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 1104 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 1163
Query: 213 gcaacaaacagccgcttcacaattttctataatcctagggcaagtccaacagaatttgtt 272
|| | || |||| || || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 1164 gccaacaatagcccatttaccatcttttataaccctagggccagtcctactgaatttgtt 1223
Query: 273 at 274
||
Sbjct: 1224 at 1225
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1661_C12
Length = 122214
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 102595 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 102654
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 102655 cggtttactattttctataatcc 102677
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 102344 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 102390
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0023I17
Length = 141852
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 34567 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 34626
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 34627 cggtttactattttctataatcc 34649
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 34316 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 34362
>gb|AACV01003410.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003410, whole
genome shotgun sequence
Length = 40342
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 13531 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 13590
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 13591 cggtttactattttctataatcc 13613
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 13280 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 13326
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 455620 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 455679
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 455680 cggtttactattttctataatcc 455702
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 455369 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 455415
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 3577560 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 3577619
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 3577620 cggtttactattttctataatcc 3577642
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 3577309 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 3577355
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 3577560 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 3577619
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 3577620 cggtttactattttctataatcc 3577642
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 3577309 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 3577355
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 54.0 bits (27), Expect = 2e-004
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 165 agtgacagcatgcacatcggactccttgcagcagcagctcatgctgctgcaacaaacagc 224
|||||||||||||| || || || ||||| ||||| ||||| || || ||||||| |||
Sbjct: 3489772 agtgacagcatgcatattggtctgcttgctgcagctgctcacgccgcatcaacaaatagc 3489831
Query: 225 cgcttcacaattttctataatcc 247
|| || || ||||||||||||||
Sbjct: 3489832 cggtttactattttctataatcc 3489854
Score = 46.1 bits (23), Expect = 0.038
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgt 73
||||| || ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 3489521 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgt 3489567
>ref|NT_107234.1| Oryza sativa (japonica cultivar-group)
Length = 1126496
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 294918 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 294977
Query: 213 gc 214
||
Sbjct: 294978 gc 294979
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OJ1215_E11
Length = 105301
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 12161 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 12220
Query: 213 gc 214
||
Sbjct: 12221 gc 12222
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0596H10
Length = 166570
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 159861 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 159920
Query: 213 gc 214
||
Sbjct: 159921 gc 159922
>gb|AACV01014877.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014877, whole
genome shotgun sequence
Length = 37173
Score = 52.0 bits (26), Expect = 6e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 153 tctgttctttcgagtgacagcatgcacatcggactccttgcagcagcagctcatgctgct 212
||||| ||||| ||||||||||||||||| || | ||||| || ||||| |||||||||
Sbjct: 23018 tctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgct 23077
Query: 213 gc 214
||
Sbjct: 23078 gc 23079
>dbj|AK066725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074M13, full
insert sequence
Length = 3235
Score = 50.1 bits (25), Expect = 0.002
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 27 tggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcatatgg 86
||||| || ||||| ||||| |||||||| ||||||||||| ||||| || || || |||
Sbjct: 753 tggagcgtctttgtaagtgcaaagagactggttgctggagactctgtcctttttatctgg 812
Query: 87 aatga 91
|||||
Sbjct: 813 aatga 817
>gb|CB638688.1|CB638688 OSJNEa07E15.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa07E15 5', mRNA sequence
Length = 595
Score = 48.1 bits (24), Expect = 0.010
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 24 ggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtgctattcata 83
||||||||||||||||| ||||| || ||||| || || |||| ||||| |||||||
Sbjct: 501 ggctggagtgtgtttgtgagtgcgaaaagactagtagcaagagactctgttatattcatc 560
Query: 84 tggaatga 91
||||||||
Sbjct: 561 tggaatga 568
>gb|AU068000.1|AU068000 AU068000 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11460_7A, mRNA sequence
Length = 379
Score = 44.1 bits (22), Expect = 0.15
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 23 tggctggagtgtgtttgtcagtgctaagagacttgttgctgg 64
|||||||||||||||||| ||||| || | |||||||||||
Sbjct: 95 tggctggagtgtgtttgttagtgccaaacggcttgttgctgg 136
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,478,688
Number of Sequences: 438736
Number of extensions: 1478688
Number of successful extensions: 7800
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7206
Number of HSP's gapped (non-prelim): 570
length of query: 1029
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1008
effective length of database: 2,791,206,460
effective search space: 2813536111680
effective search space used: 2813536111680
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)