BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950290.2.2
(867 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK105065.1| Oryza sativa (japonica cultivar-group) cDNA... 400 e-109
dbj|AK066644.1| Oryza sativa (japonica cultivar-group) cDNA... 392 e-106
dbj|AK066428.1| Oryza sativa (japonica cultivar-group) cDNA... 161 8e-037
ref|XM_479626.1| Oryza sativa (japonica cultivar-group), mRNA 161 8e-037
gb|CF303856.1|CF303856 ABF1--03-G11.g1 ABF3-overexpressing ... 127 1e-026
gb|AC134232.2| Oryza sativa (japonica cultivar-group) chrom... 111 6e-022
gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbar... 111 6e-022
gb|AACV01006370.1| Oryza sativa (japonica cultivar-group) c... 111 6e-022
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 111 6e-022
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 111 6e-022
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 111 6e-022
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 111 6e-022
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 111 6e-022
dbj|AP003831.2| Oryza sativa (japonica cultivar-group) chro... 64 1e-007
dbj|AP005199.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AACV01017072.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|CD670619.1|CD670619 OsMR034 5MT resistant rice mutant cD... 54 1e-004
gb|CO435642.1|CO435642 OsMR708 5MT resistant rice mutant cD... 54 1e-004
gb|CO435679.1|CO435679 OsMR745 5MT resistant rice mutant cD... 54 1e-004
gb|CO435723.1|CO435723 OsMR789 5MT resistant rice mutant cD... 54 1e-004
gb|CO435761.1|CO435761 OsMR827 5MT resistant rice mutant cD... 54 1e-004
gb|CO435894.1|CO435894 OsMR528 5MT resistant rice mutant cD... 48 0.008
gb|CO435930.1|CO435930 OsMR564 5MT resistant rice mutant cD... 48 0.008
gb|CO435822.1|CO435822 OsMR888 5MT resistant rice mutant cD... 48 0.008
gb|CB680476.1|CB680476 OSJNEf05E13.r OSJNEf Oryza sativa (j... 46 0.032
gb|CB686001.1|CB686001 OSJNEf16O11.r OSJNEf Oryza sativa (j... 46 0.032
gb|CF306193.1|CF306193 HDA1--02-P12.g1 OsHDAC1-overexpressi... 46 0.032
gb|CF325777.1|CF325777 JMT1--04-C23.g1 AtJMT-overexpressing... 46 0.032
gb|CD670726.1|CD670726 OsMR142 5MT resistant rice mutant cD... 46 0.032
gb|CD670925.1|CD670925 OsMR346 5MT resistant rice mutant cD... 46 0.032
gb|CD671057.1|CD671057 OsMR478 5MT resistant rice mutant cD... 46 0.032
gb|CO436000.1|CO436000 OsMR634 5MT resistant rice mutant cD... 46 0.032
gb|CO435704.1|CO435704 OsMR770 5MT resistant rice mutant cD... 46 0.032
gb|CB663219.1|CB663219 OSJNEd07O19.r OSJNEd Oryza sativa (j... 44 0.12
gb|CB666143.1|CB666143 OSJNEd12O13.f OSJNEd Oryza sativa (j... 44 0.12
gb|CB680854.1|CB680854 OSJNEf06E24.r OSJNEf Oryza sativa (j... 44 0.12
gb|CO435948.1|CO435948 OsMR582 5MT resistant rice mutant cD... 44 0.12
gb|CO435647.1|CO435647 OsMR713 5MT resistant rice mutant cD... 44 0.12
gb|CO435727.1|CO435727 OsMR793 5MT resistant rice mutant cD... 44 0.12
gb|CO435802.1|CO435802 OsMR868 5MT resistant rice mutant cD... 44 0.12
gb|CO435837.1|CO435837 OsMR903 5MT resistant rice mutant cD... 44 0.12
gb|CO435855.1|CO435855 OsMR921 5MT resistant rice mutant cD... 44 0.12
gb|CB643375.1|CB643375 OSJNEb04A15.r OSJNEb Oryza sativa (j... 42 0.49
gb|CB648749.1|CB648749 OSJNEb12E18.r OSJNEb Oryza sativa (j... 42 0.49
gb|CB649851.1|CB649851 OSJNEb14A08.r OSJNEb Oryza sativa (j... 42 0.49
gb|CB650886.1|CB650886 OSJNEb15J13.r OSJNEb Oryza sativa (j... 42 0.49
gb|CB665797.1|CB665797 OSJNEd12G15.r OSJNEd Oryza sativa (j... 42 0.49
gb|CB674803.1|CB674803 OSJNEe10A20.r OSJNEe Oryza sativa (j... 42 0.49
gb|CB678763.1|CB678763 OSJNEf01F18.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB680051.1|CB680051 OSJNEf04F02.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB680270.1|CB680270 OSJNEf04L20.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB680737.1|CB680737 OSJNEf05P23.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB681074.1|CB681074 OSJNEf06N22.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB681085.1|CB681085 OSJNEf06O08.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB682831.1|CB682831 OSJNEf10I15.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB682854.1|CB682854 OSJNEf10J08.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB683735.1|CB683735 OSJNEf12I11.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB684072.1|CB684072 OSJNEf13D24.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB684326.1|CB684326 OSJNEf13L10.r OSJNEf Oryza sativa (j... 42 0.49
gb|CB684328.1|CB684328 OSJNEf13L11.r OSJNEf Oryza sativa (j... 42 0.49
gb|CD670602.1|CD670602 OsMR017 5MT resistant rice mutant cD... 42 0.49
gb|CD670618.1|CD670618 OsMR033 5MT resistant rice mutant cD... 42 0.49
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 42 0.49
gb|CD670752.1|CD670752 OsMR168 5MT resistant rice mutant cD... 42 0.49
gb|CD670773.1|CD670773 OsMR190 5MT resistant rice mutant cD... 42 0.49
gb|CD670774.1|CD670774 OsMR191 5MT resistant rice mutant cD... 42 0.49
gb|CD670778.1|CD670778 OsMR195 5MT resistant rice mutant cD... 42 0.49
gb|CD670834.1|CD670834 OsMR253 5MT resistant rice mutant cD... 42 0.49
gb|CD670851.1|CD670851 OsMR271 5MT resistant rice mutant cD... 42 0.49
gb|CD670886.1|CD670886 OsMR307 5MT resistant rice mutant cD... 42 0.49
gb|CD670933.1|CD670933 OsMR354 5MT resistant rice mutant cD... 42 0.49
gb|CD670937.1|CD670937 OsMR358 5MT resistant rice mutant cD... 42 0.49
gb|CD670945.1|CD670945 OsMR366 5MT resistant rice mutant cD... 42 0.49
gb|CD671042.1|CD671042 OsMR463 5MT resistant rice mutant cD... 42 0.49
gb|CD671047.1|CD671047 OsMR468 5MT resistant rice mutant cD... 42 0.49
gb|CD671064.1|CD671064 OsMR485 5MT resistant rice mutant cD... 42 0.49
gb|CF075625.1|CF075625 OsMR214 5MT resistant rice mutant cD... 42 0.49
gb|CO435876.1|CO435876 OsMR510 5MT resistant rice mutant cD... 42 0.49
gb|CO435892.1|CO435892 OsMR526 5MT resistant rice mutant cD... 42 0.49
gb|CO435916.1|CO435916 OsMR550 5MT resistant rice mutant cD... 42 0.49
gb|CO435934.1|CO435934 OsMR568 5MT resistant rice mutant cD... 42 0.49
gb|CO435935.1|CO435935 OsMR569 5MT resistant rice mutant cD... 42 0.49
gb|CO435947.1|CO435947 OsMR581 5MT resistant rice mutant cD... 42 0.49
gb|CO435579.1|CO435579 OsMR645 5MT resistant rice mutant cD... 42 0.49
gb|CO435608.1|CO435608 OsMR674 5MT resistant rice mutant cD... 42 0.49
gb|CO435620.1|CO435620 OsMR686 5MT resistant rice mutant cD... 42 0.49
gb|CO435654.1|CO435654 OsMR720 5MT resistant rice mutant cD... 42 0.49
gb|CO435678.1|CO435678 OsMR744 5MT resistant rice mutant cD... 42 0.49
gb|CO435725.1|CO435725 OsMR791 5MT resistant rice mutant cD... 42 0.49
gb|CO435730.1|CO435730 OsMR796 5MT resistant rice mutant cD... 42 0.49
gb|CO435739.1|CO435739 OsMR805 5MT resistant rice mutant cD... 42 0.49
gb|CO435740.1|CO435740 OsMR806 5MT resistant rice mutant cD... 42 0.49
gb|CO435800.1|CO435800 OsMR866 5MT resistant rice mutant cD... 42 0.49
gb|CO435857.1|CO435857 OsMR923 5MT resistant rice mutant cD... 42 0.49
gb|CO436307.1|CO436307 RF09 5MT resistant rice mutant cDNA ... 42 0.49
>dbj|AK105065.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F05, full
insert sequence
Length = 1267
Score = 400 bits (202), Expect = e-109
Identities = 369/424 (87%), Gaps = 3/424 (0%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 685 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 626
Query: 471 ttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaaca 530
|||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | |
Sbjct: 625 ttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtccata 566
Query: 531 taaaaaaggtaatcaaagttctttaagagcgaggaacag---tcatcagatacccgaaga 587
|| || ||||| ||||| | |||| | | | |||| || || |||| || ||||||
Sbjct: 565 tagaagaggtagtcaaactgctttgacggtgtggaaaagctgtcgtcagttatacgaaga 506
Query: 588 ggcctttccttatgtggacgactttcaatctttgtgaggttgatgtccctcaatgcaaat 647
||||||| ||| ||||| || ||||| ||||| || |||||||| ||||||| ||||||
Sbjct: 505 ggccttttcttgtgtgggcggctttctatcttggttaggttgatttccctcagtgcaaac 446
Query: 648 acagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaagactatgcttgtc 707
|| |||||||||||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 445 accccaagtgccttaaagagttgcccaggtccttcttcaagtgaaaagactatgctagtc 386
Query: 708 ttaaatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtg 767
|| ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 385 ttgaatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggta 326
Query: 768 acattatctttgtcatcctgaatattctcagcaagaacatccaatccatacagtttagcc 827
|||||||||||||||||||||||||| ||||||||||||| || |||||| |||| |||
Sbjct: 325 acattatctttgtcatcctgaatattttcagcaagaacattcagtccataaagttcagct 266
Query: 828 gcca 831
||||
Sbjct: 265 gcca 262
>dbj|AK066644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M17, full
insert sequence
Length = 1864
Score = 392 bits (198), Expect = e-106
Identities = 368/424 (86%), Gaps = 3/424 (0%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1333 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 1274
Query: 471 ttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaaca 530
|||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| | |
Sbjct: 1273 ttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtccata 1214
Query: 531 taaaaaaggtaatcaaagttctttaagagcgaggaacag---tcatcagatacccgaaga 587
|| || ||||| ||||| | |||| | | | |||| || || |||| || ||||||
Sbjct: 1213 tagaagaggtagtcaaactgctttgacggtgtggaaaagctgtcgtcagttatacgaaga 1154
Query: 588 ggcctttccttatgtggacgactttcaatctttgtgaggttgatgtccctcaatgcaaat 647
||||||| ||| ||||| || ||||| ||||| || |||||||| ||||||| |||||
Sbjct: 1153 ggccttttcttgtgtgggcggctttctatcttggttaggttgatttccctcagcgcaaac 1094
Query: 648 acagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaagactatgcttgtc 707
|| |||||||||||||||| || |||||||||||||| ||||||||||||||||| |||
Sbjct: 1093 accccaagtgccttaaagagttgcccaggtccttcttcaagtgaaaagactatgctagtc 1034
Query: 708 ttaaatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtg 767
|| ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1033 ttgaatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggta 974
Query: 768 acattatctttgtcatcctgaatattctcagcaagaacatccaatccatacagtttagcc 827
|||||||||||||||||||||||||| ||||||||||||| || |||||| |||| |||
Sbjct: 973 acattatctttgtcatcctgaatattttcagcaagaacattcagtccataaagttcagct 914
Query: 828 gcca 831
||||
Sbjct: 913 gcca 910
>dbj|AK066428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059A18, full
insert sequence
Length = 1507
Score = 161 bits (81), Expect = 8e-037
Identities = 210/253 (83%)
Strand = Plus / Minus
Query: 585 agaggcctttccttatgtggacgactttcaatctttgtgaggttgatgtccctcaatgca 644
|||||| ||| ||| |||||||| ||||| ||||| |||||||| || | |||| ||||
Sbjct: 1027 agaggctttttcttgtgtggacggctttccatcttggtgaggttaatttttctcagtgca 968
Query: 645 aatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaagactatgctt 704
|| || || || |||||||| || || ||||| |||||||| | ||||||||||||||
Sbjct: 967 aacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaagactatgcta 908
Query: 705 gtcttaaatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgg 764
||||| ||||| |||||||| ||||| || |||||||| ||||| ||||||||||| ||
Sbjct: 907 gtcttgaatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgt 848
Query: 765 gtgacattatctttgtcatcctgaatattctcagcaagaacatccaatccatacagttta 824
|| |||||||| |||||||||||||||| || ||||||| ||||| |||||| |||| |
Sbjct: 847 gttacattatcggtgtcatcctgaatattttctgcaagaatatccagtccataaagttga 788
Query: 825 gccgccaacgaac 837
|| ||||| ||||
Sbjct: 787 gctgccaatgaac 775
Score = 85.7 bits (43), Expect = 4e-014
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactccttcagatttcca 482
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||| | ||| |
Sbjct: 1192 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcctttaagtttgcc 1133
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 1132 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 1074
>ref|XM_479626.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1507
Score = 161 bits (81), Expect = 8e-037
Identities = 210/253 (83%)
Strand = Plus / Minus
Query: 585 agaggcctttccttatgtggacgactttcaatctttgtgaggttgatgtccctcaatgca 644
|||||| ||| ||| |||||||| ||||| ||||| |||||||| || | |||| ||||
Sbjct: 1027 agaggctttttcttgtgtggacggctttccatcttggtgaggttaatttttctcagtgca 968
Query: 645 aatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaagactatgctt 704
|| || || || |||||||| || || ||||| |||||||| | ||||||||||||||
Sbjct: 967 aacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaagactatgcta 908
Query: 705 gtcttaaatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgg 764
||||| ||||| |||||||| ||||| || |||||||| ||||| ||||||||||| ||
Sbjct: 907 gtcttgaatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgt 848
Query: 765 gtgacattatctttgtcatcctgaatattctcagcaagaacatccaatccatacagttta 824
|| |||||||| |||||||||||||||| || ||||||| ||||| |||||| |||| |
Sbjct: 847 gttacattatcggtgtcatcctgaatattttctgcaagaatatccagtccataaagttga 788
Query: 825 gccgccaacgaac 837
|| ||||| ||||
Sbjct: 787 gctgccaatgaac 775
Score = 85.7 bits (43), Expect = 4e-014
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactccttcagatttcca 482
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||| | ||| |
Sbjct: 1192 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcctttaagtttgcc 1133
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 1132 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 1074
>gb|CF303856.1|CF303856 ABF1--03-G11.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--03-G11, mRNA sequence
Length = 596
Score = 127 bits (64), Expect = 1e-026
Identities = 127/148 (85%)
Strand = Plus / Minus
Query: 690 gaaaagactatgcttgtcttaaatggtttatcagtgcgaggtatgatgggttctcgagct 749
|||||||||||||| ||||| ||||| |||||||| ||||| || |||||||| |||||
Sbjct: 592 gaaaagactatgctagtcttgaatggcttatcagtacgaggaataatgggttcccgagcc 533
Query: 750 agcatcataaaacgggtgacattatctttgtcatcctgaatattctcagcaagaacatcc 809
||||||||||| || || |||||||| |||||||||||||||| || ||||||| ||||
Sbjct: 532 agcatcataaagcgtgttacattatcggtgtcatcctgaatattttctgcaagaatatcc 473
Query: 810 aatccatacagtttagccgccaacgaac 837
| |||||| |||| ||| ||||| ||||
Sbjct: 472 agtccataaagttgagctgccaatgaac 445
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0013D02, complete sequence
Length = 131883
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 36177 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 36236
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 36237 ttatctttgtcatcct 36252
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 35988 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 36047
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 36048 tcaagtgaaaagactatgctagtct 36072
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 35596 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 35655
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 35656 tatagaagaggtagtcaaa 35674
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 35470 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 35529
Query: 471 t 471
|
Sbjct: 35530 t 35530
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 36324 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 36371
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0022M22, from chromosome 3, complete sequence
Length = 124166
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 709 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 650
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 649 ttatctttgtcatcct 634
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 898 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 839
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 838 tcaagtgaaaagactatgctagtct 814
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 1290 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 1231
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 1230 tatagaagaggtagtcaaa 1212
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1416 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 1357
Query: 471 t 471
|
Sbjct: 1356 t 1356
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 562 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 515
>gb|AACV01006370.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006370, whole
genome shotgun sequence
Length = 49684
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 26759 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 26700
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 26699 ttatctttgtcatcct 26684
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 26948 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 26889
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 26888 tcaagtgaaaagactatgctagtct 26864
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 27340 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 27281
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 27280 tatagaagaggtagtcaaa 27262
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 27466 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 27407
Query: 471 t 471
|
Sbjct: 27406 t 27406
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 26612 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 26565
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 1182257 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 1182198
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 1182197 ttatctttgtcatcct 1182182
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 1182446 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 1182387
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 1182386 tcaagtgaaaagactatgctagtct 1182362
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 1182838 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 1182779
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 1182778 tatagaagaggtagtcaaa 1182760
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1182964 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 1182905
Query: 471 t 471
|
Sbjct: 1182904 t 1182904
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 1182110 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 1182063
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 9879793 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 9879734
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 9879733 ttatctttgtcatcct 9879718
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 9879982 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 9879923
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 9879922 tcaagtgaaaagactatgctagtct 9879898
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 9880374 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 9880315
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 9880314 tatagaagaggtagtcaaa 9880296
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9880500 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 9880441
Query: 471 t 471
|
Sbjct: 9880440 t 9880440
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 9879646 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 9879599
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 10072155 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 10072096
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 10072095 ttatctttgtcatcct 10072080
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 10072344 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 10072285
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 10072284 tcaagtgaaaagactatgctagtct 10072260
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 10072736 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 10072677
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 10072676 tatagaagaggtagtcaaa 10072658
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 10072862 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 10072803
Query: 471 t 471
|
Sbjct: 10072802 t 10072802
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 10072008 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 10071961
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 9836441 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 9836382
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 9836381 ttatctttgtcatcct 9836366
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 9836630 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 9836571
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 9836570 tcaagtgaaaagactatgctagtct 9836546
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 9837022 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 9836963
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 9836962 tatagaagaggtagtcaaa 9836944
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9837148 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 9837089
Query: 471 t 471
|
Sbjct: 9837088 t 9837088
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 9836294 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 9836247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 111 bits (56), Expect = 6e-022
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct: 9838320 aatggtttatcggtgcgaggtataattggttctcgagccagcatcataaaacgggtaaca 9838261
Query: 771 ttatctttgtcatcct 786
||||||||||||||||
Sbjct: 9838260 ttatctttgtcatcct 9838245
Score = 97.6 bits (49), Expect = 1e-017
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 624 aggttgatgtccctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttct 683
|||||||| ||||||| |||||| || |||||||||||||||| || ||||||||||||
Sbjct: 9838509 aggttgatttccctcagtgcaaacaccccaagtgccttaaagagttgcccaggtccttct 9838450
Query: 684 tctagtgaaaagactatgcttgtct 708
|| ||||||||||||||||| ||||
Sbjct: 9838449 tcaagtgaaaagactatgctagtct 9838425
Score = 93.7 bits (47), Expect = 2e-016
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 469 ccttcagatttccaagagcattctgagtctttggatcagccattgatgcttcaaggtcaa 528
|||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 9838901 ccttcaaatttccaagagcattctgagtttttggatcagccattgatgcctcaaggtcca 9838842
Query: 529 cataaaaaaggtaatcaaa 547
||| || ||||| |||||
Sbjct: 9838841 tatagaagaggtagtcaaa 9838823
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 411 taaggttcattcacatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcc 470
|||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 9839027 taagcttcatttacatctgtaggatagcttccaaggactcttaaaaaggttgcaaactcc 9838968
Query: 471 t 471
|
Sbjct: 9838967 t 9838967
Score = 48.1 bits (24), Expect = 0.008
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 784 cctgaatattctcagcaagaacatccaatccatacagtttagccgcca 831
|||||||||| ||||||||||||| || |||||| |||| ||| ||||
Sbjct: 9838173 cctgaatattttcagcaagaacattcagtccataaagttcagctgcca 9838126
>dbj|AP003831.2| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1445_H10,
*** SEQUENCING IN PROGRESS ***
Length = 100886
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 47475 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 47416
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 47415 ttatcggtgtcatcct 47400
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 48132 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 48084
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 48000 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 47942
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 47638 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 47579
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 47578 actatgctagtct 47566
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0627E10
Length = 163388
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 54487 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 54546
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 54547 ttatcggtgtcatcct 54562
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 53830 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 53878
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 53962 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 54020
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 54324 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 54383
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 54384 actatgctagtct 54396
>gb|AACV01017072.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017072, whole
genome shotgun sequence
Length = 30702
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 17295 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 17236
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 17235 ttatcggtgtcatcct 17220
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 17952 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 17904
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 17820 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 17762
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 17458 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 17399
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 17398 actatgctagtct 17386
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 17140820 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 17140879
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 17140880 ttatcggtgtcatcct 17140895
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 17140163 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 17140211
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 17140295 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 17140353
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 17140657 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 17140716
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 17140717 actatgctagtct 17140729
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 15136246 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 15136305
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 15136306 ttatcggtgtcatcct 15136321
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 15135589 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 15135637
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 15135721 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 15135779
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 15136083 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 15136142
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 15136143 actatgctagtct 15136155
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 28535685 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 28535744
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 28535745 ttatcggtgtcatcct 28535760
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 28535028 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 28535076
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 28535160 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 28535218
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 28535522 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 28535581
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 28535582 actatgctagtct 28535594
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 711 aatggtttatcagtgcgaggtatgatgggttctcgagctagcatcataaaacgggtgaca 770
||||| |||||||| ||||| || |||||||| ||||| ||||||||||| || || |||
Sbjct: 29527815 aatggcttatcagtacgaggaataatgggttcccgagccagcatcataaagcgtgttaca 29527874
Query: 771 ttatctttgtcatcct 786
||||| |||||||||
Sbjct: 29527875 ttatcggtgtcatcct 29527890
Score = 58.0 bits (29), Expect = 8e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 423 acatctgtaggatagcttccaagaactcttaaaaatgttgcaaactcct 471
||||| ||||||||||| ||||||||||||| ||| ||||| |||||||
Sbjct: 29527158 acatcggtaggatagctcccaagaactcttagaaaggttgcgaactcct 29527206
Score = 46.1 bits (23), Expect = 0.032
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 483 agagcattctgagtctttggatcagccattgatgcttcaaggtcaacataaaaaaggta 541
|||||||| |||| ||||||||||||||||| || ||||| || ||||| || |||||
Sbjct: 29527290 agagcattttgagcatttggatcagccattgacgcctcaagatctacatagaagaggta 29527348
Score = 42.1 bits (21), Expect = 0.49
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 636 ctcaatgcaaatacagcaagtgccttaaagagctgtccaggtccttcttctagtgaaaag 695
|||| |||||| || || || |||||||| || || ||||| |||||||| | ||||||
Sbjct: 29527652 ctcagtgcaaacactgccagcgccttaaatagttgcccaggcccttcttccaaagaaaag 29527711
Query: 696 actatgcttgtct 708
|||||||| ||||
Sbjct: 29527712 actatgctagtct 29527724
>gb|CD670619.1|CD670619 OsMR034 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 693
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||||||||||||||||||||
Sbjct: 42 gtgccgaatcctgcagcccgggggatc 16
>gb|CO435642.1|CO435642 OsMR708 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 809
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||||||||||||||||||||
Sbjct: 65 gtgccgaatcctgcagcccgggggatc 39
>gb|CO435679.1|CO435679 OsMR745 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 625
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||||||||||||||||||||
Sbjct: 67 gtgccgaatcctgcagcccgggggatc 41
>gb|CO435723.1|CO435723 OsMR789 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 886
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||||||||||||||||||||
Sbjct: 58 gtgccgaatcctgcagcccgggggatc 32
>gb|CO435761.1|CO435761 OsMR827 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 288
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||||||||||||||||||||
Sbjct: 65 gtgccgaatcctgcagcccgggggatc 39
>gb|CO435894.1|CO435894 OsMR528 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 881
Score = 48.1 bits (24), Expect = 0.008
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||| ||||||||||||||||||||||
Sbjct: 67 gtgcngaatcctgcagcccgggggatc 41
>gb|CO435930.1|CO435930 OsMR564 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 870
Score = 48.1 bits (24), Expect = 0.008
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||| ||||||||||||||||||||||
Sbjct: 64 gtgcngaatcctgcagcccgggggatc 38
>gb|CO435822.1|CO435822 OsMR888 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 810
Score = 48.1 bits (24), Expect = 0.008
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||| ||||||||||||||||||||||
Sbjct: 63 gtgcngaatcctgcagcccgggggatc 37
>gb|CB680476.1|CB680476 OSJNEf05E13.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf05E13 3', mRNA sequence
Length = 619
Score = 46.1 bits (23), Expect = 0.032
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 834 gaacctggtgccgaat-cctgcagcccgggggatc 867
|||||| ||||||||| ||||||||||||||||||
Sbjct: 559 gaacctcgtgccgaattcctgcagcccgggggatc 593
>gb|CB686001.1|CB686001 OSJNEf16O11.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16O11 3', mRNA sequence
Length = 595
Score = 46.1 bits (23), Expect = 0.032
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 834 gaacctggtgccgaat-cctgcagcccgggggatc 867
|||||| ||||||||| ||||||||||||||||||
Sbjct: 561 gaacctcgtgccgaattcctgcagcccgggggatc 595
>gb|CF306193.1|CF306193 HDA1--02-P12.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-P12, mRNA sequence
Length = 709
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||||| ||||||||||||||||
Sbjct: 31 gtgccgaatcatgcagcccgggggatc 5
>gb|CF325777.1|CF325777 JMT1--04-C23.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-C23, mRNA sequence
Length = 540
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
|||||||| ||||||||||||||||||
Sbjct: 30 gtgccgaaacctgcagcccgggggatc 4
>gb|CD670726.1|CD670726 OsMR142 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 631
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
||||||| |||||||||||||||||||
Sbjct: 43 gtgccgattcctgcagcccgggggatc 17
>gb|CD670925.1|CD670925 OsMR346 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 753
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
||||||| |||||||||||||||||||
Sbjct: 50 gtgccgattcctgcagcccgggggatc 24
>gb|CD671057.1|CD671057 OsMR478 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 714
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
||||||| |||||||||||||||||||
Sbjct: 37 gtgccgattcctgcagcccgggggatc 11
>gb|CO436000.1|CO436000 OsMR634 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 877
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 841 gtgccgaatcctgcagcccgggggatc 867
||||||| |||||||||||||||||||
Sbjct: 65 gtgccgagtcctgcagcccgggggatc 39
>gb|CO435704.1|CO435704 OsMR770 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 856
Score = 46.1 bits (23), Expect = 0.032
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 834 gaacctggtgccgaat-cctgcagcccgggggatc 867
|||||| ||||||||| ||||||||||||||||||
Sbjct: 66 gaacctcgtgccgaattcctgcagcccgggggatc 32
>gb|CB663219.1|CB663219 OSJNEd07O19.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07O19 3', mRNA sequence
Length = 793
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 688 aacctcgtgccgaattcctgcagcccgggggatc 721
>gb|CB666143.1|CB666143 OSJNEd12O13.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12O13 5', mRNA sequence
Length = 700
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 662 aacctcgtgccgaattcctgcagcccgggggatc 695
>gb|CB680854.1|CB680854 OSJNEf06E24.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06E24 3', mRNA sequence
Length = 768
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 731 aacctcgtgccgaattcctgcagcccgggggatc 764
>gb|CO435948.1|CO435948 OsMR582 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 937
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 846 gaatcctgcagcccgggggatc 867
||||||||||||||||||||||
Sbjct: 60 gaatcctgcagcccgggggatc 39
>gb|CO435647.1|CO435647 OsMR713 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 852
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 66 aacctcgtgccgaattcctgcagcccgggggatc 33
>gb|CO435727.1|CO435727 OsMR793 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 887
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 69 aacctcgtgccgaattcctgcagcccgggggatc 36
>gb|CO435802.1|CO435802 OsMR868 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 806
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 56 aacctcgtgccgaattcctgcagcccgggggatc 23
>gb|CO435837.1|CO435837 OsMR903 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 788
Score = 44.1 bits (22), Expect = 0.12
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 835 aacctggtgccgaat-cctgcagcccgggggatc 867
||||| ||||||||| ||||||||||||||||||
Sbjct: 63 aacctcgtgccgaattcctgcagcccgggggatc 30
>gb|CO435855.1|CO435855 OsMR921 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 899
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 846 gaatcctgcagcccgggggatc 867
||||||||||||||||||||||
Sbjct: 63 gaatcctgcagcccgggggatc 42
>gb|CB643375.1|CB643375 OSJNEb04A15.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04A15 3', mRNA sequence
Length = 785
Score = 42.1 bits (21), Expect = 0.49
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 836 acctggtgccgaat-cctgcagcccgggggatc 867
|||| ||||||||| ||||||||||||||||||
Sbjct: 681 acctcgtgccgaattcctgcagcccgggggatc 713
>gb|CB648749.1|CB648749 OSJNEb12E18.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12E18 3', mRNA sequence
Length = 823
Score = 42.1 bits (21), Expect = 0.49
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 836 acctggtgccgaat-cctgcagcccgggggatc 867
|||| ||||||||| ||||||||||||||||||
Sbjct: 788 acctcgtgccgaattcctgcagcccgggggatc 820
>gb|CB649851.1|CB649851 OSJNEb14A08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14A08 3', mRNA sequence
Length = 776
Score = 42.1 bits (21), Expect = 0.49
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 836 acctggtgccgaat-cctgcagcccgggggatc 867
|||| ||||||||| ||||||||||||||||||
Sbjct: 726 acctcgtgccgaattcctgcagcccgggggatc 758
>gb|CB650886.1|CB650886 OSJNEb15J13.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15J13 3', mRNA sequence
Length = 853
Score = 42.1 bits (21), Expect = 0.49
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 836 acctggtgccgaat-cctgcagcccgggggatc 867
|||| ||||||||| ||||||||||||||||||
Sbjct: 727 acctcgtgccgaattcctgcagcccgggggatc 759
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,189,625
Number of Sequences: 438736
Number of extensions: 1189625
Number of successful extensions: 7828
Number of sequences better than 0.5: 110
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 7608
Number of HSP's gapped (non-prelim): 274
length of query: 867
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 846
effective length of database: 2,791,206,460
effective search space: 2361360665160
effective search space used: 2361360665160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)