BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2949673.2.1
(636 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB642809.1|CB642809 OSJNEb03C24.r OSJNEb Oryza sativa (j... 129 2e-027
gb|CB648808.1|CB648808 OSJNEb12G05.r OSJNEb Oryza sativa (j... 129 2e-027
gb|CB648870.1|CB648870 OSJNEb12H19.r OSJNEb Oryza sativa (j... 129 2e-027
gb|CB654179.1|CB654179 OSJNEc05O24.r OSJNEc Oryza sativa (j... 129 2e-027
dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA... 129 2e-027
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 129 2e-027
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 129 2e-027
gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) c... 129 2e-027
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 129 2e-027
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 129 2e-027
gb|CB646345.1|CB646345 OSJNEb08M02.r OSJNEb Oryza sativa (j... 121 5e-025
gb|CB646878.1|CB646878 OSJNEb09J03.r OSJNEb Oryza sativa (j... 121 5e-025
gb|CB648706.1|CB648706 OSJNEb12D16.f OSJNEb Oryza sativa (j... 121 5e-025
gb|CB653589.1|CB653589 OSJNEc04M09.r OSJNEc Oryza sativa (j... 121 5e-025
gb|CB654463.1|CB654463 OSJNEc07A05.f OSJNEc Oryza sativa (j... 121 5e-025
gb|CB655788.1|CB655788 OSJNEc09I09.r OSJNEc Oryza sativa (j... 121 5e-025
gb|CB657550.1|CB657550 OSJNEc12P22.r OSJNEc Oryza sativa (j... 121 5e-025
gb|CB665927.1|CB665927 OSJNEd12J17.r OSJNEd Oryza sativa (j... 121 5e-025
gb|CB673521.1|CB673521 OSJNEe08B11.r OSJNEe Oryza sativa (j... 121 5e-025
gb|CB674968.1|CB674968 OSJNEe10F17.r OSJNEe Oryza sativa (j... 121 5e-025
gb|CB681488.1|CB681488 OSJNEf07M17.r OSJNEf Oryza sativa (j... 121 5e-025
dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA... 121 5e-025
gb|CA758951.1|CA758951 BR030033000_PLATE_H05_40_046.ab1 OA ... 117 8e-024
dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA... 117 8e-024
gb|CB653588.1|CB653588 OSJNEc04M09.f OSJNEc Oryza sativa (j... 113 1e-022
dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA... 113 1e-022
gb|CB655414.1|CB655414 OSJNEc08N04.r OSJNEc Oryza sativa (j... 109 2e-021
gb|CB655790.1|CB655790 OSJNEc09I13.r OSJNEc Oryza sativa (j... 109 2e-021
gb|AU101083.1|AU101083 AU101083 Rice panicle at flowering s... 107 7e-021
gb|AU077742.1|AU077742 AU077742 Rice cDNA from young root O... 94 1e-016
gb|CB655787.1|CB655787 OSJNEc09I09.f OSJNEc Oryza sativa (j... 86 3e-014
gb|CB657549.1|CB657549 OSJNEc12P22.f OSJNEc Oryza sativa (j... 86 3e-014
gb|CB665926.1|CB665926 OSJNEd12J17.f OSJNEd Oryza sativa (j... 86 3e-014
gb|AU163932.1|AU163932 AU163932 Rice panicle at ripening st... 62 4e-007
gb|AU164498.1|AU164498 AU164498 Rice root Oryza sativa (jap... 62 4e-007
gb|CB682900.1|CB682900 OSJNEf10K22.f OSJNEf Oryza sativa (j... 62 4e-007
dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD ... 62 4e-007
gb|AACV01003516.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA 62 4e-007
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 62 4e-007
ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-... 62 4e-007
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
dbj|AP003990.3| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
tpg|BK003969.1| TPA: Oryza sativa (japonica cultivar-group)... 62 4e-007
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
ref|NM_187696.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
gb|C99609.1|C99609 C99609 Rice panicle (longer than 10cm) O... 48 0.006
gb|AU032926.1|AU032926 AU032926 Rice green shoot Oryza sati... 48 0.006
gb|AU097525.1|AU097525 AU097525 Rice shoot Oryza sativa (ja... 48 0.006
gb|AC105364.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.091
gb|AACV01006124.1| Oryza sativa (japonica cultivar-group) c... 44 0.091
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 44 0.091
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.091
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.091
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 44 0.091
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.091
gb|CB684558.1|CB684558 OSJNEf14D06.f OSJNEf Oryza sativa (j... 42 0.36
dbj|AP005293.2| Oryza sativa (japonica cultivar-group) geno... 42 0.36
dbj|AP005385.3| Oryza sativa (japonica cultivar-group) geno... 42 0.36
gb|AACV01004847.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 42 0.36
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
>gb|CB642809.1|CB642809 OSJNEb03C24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03C24 3', mRNA sequence
Length = 817
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 342 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 401
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 402 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 461
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 462 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 502
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 560 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 619
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 620 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 679
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 680 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 739
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 740 agcgcctcccgccgcttccccggcgacgtgctgatgacg 778
>gb|CB648808.1|CB648808 OSJNEb12G05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12G05 3', mRNA sequence
Length = 743
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 225 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 284
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 285 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 344
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 345 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 385
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 443 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 502
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 503 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 562
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 563 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 622
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 623 agcgcctcccgccgcttccccggcgacgtgctgatgacg 661
>gb|CB648870.1|CB648870 OSJNEb12H19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H19 3', mRNA sequence
Length = 544
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 131 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 190
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 191 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 250
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 251 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 291
Score = 67.9 bits (34), Expect = 6e-009
Identities = 139/174 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 349 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 408
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 409 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 468
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgagg 591
|||||| |||||| | | ||||||| |||| |||||| ||||||| ||||||
Sbjct: 469 gccgccgccatctggcccgcgtcgcgggtgacgaggaactcgtcggcgccgagg 522
>gb|CB654179.1|CB654179 OSJNEc05O24.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc05O24 3', mRNA sequence
Length = 724
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 223 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 282
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 283 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 342
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 343 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 383
Score = 77.8 bits (39), Expect = 7e-012
Identities = 174/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 441 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 500
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 501 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 560
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 561 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 620
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| | |||||||||||||||
Sbjct: 621 agcgcctcccgccgcttccccggagacgtgctgatgacg 659
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full
insert sequence
Length = 1084
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 32 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 91
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 92 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 151
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 152 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 192
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 250 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 309
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 310 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 369
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 370 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 429
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 430 agcgcctcccgccgcttccccggcgacgtgctgatgacg 468
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0650H04
Length = 134533
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 34920 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 34979
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 34980 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 35039
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 35040 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 35080
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 44156 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 44097
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 44096 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 44037
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 44036 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 43996
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 31045 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 31104
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 31105 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 31164
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 31165 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 31224
Query: 383 tcccgcc 389
|||||||
Sbjct: 31225 tcccgcc 31231
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 50448 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 50389
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 50388 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 50329
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 50328 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 50269
Query: 383 tcccgcc 389
|||||||
Sbjct: 50268 tcccgcc 50262
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 43858 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 43799
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 43798 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 43739
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 43738 cggcgacgtgctgatgacg 43720
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 35138 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 35197
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 35198 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 35257
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 35258 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 35317
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 35318 agcgcctcccgccgcttccccggcgacgtgctgatgacg 35356
Score = 56.0 bits (28), Expect = 2e-005
Identities = 148/188 (78%)
Strand = Plus / Plus
Query: 445 accatctggcccatcggcttgagcaggtccagcagcggcacgacagggtggtcggccgac 504
|||||||| ||| | ||||| ||||| |||||||||||| | ||||| | || |||
Sbjct: 31287 accatctgccccttgggcttcagcagcgacagcagcggcaccagcgggtgccccgcggac 31346
Query: 505 accgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcgcgg 564
||||||||||||| ||||||| || ||||||||||| |||| |||| |||||||
Sbjct: 31347 accgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatcccctcgccgtcgcgg 31406
Query: 565 ctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagcgac 624
|| ||||||||||||||| ||||| || | || ||||| |||||||| || |||||
Sbjct: 31407 ctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgac 31466
Query: 625 gtgctgat 632
| ||||||
Sbjct: 31467 gagctgat 31474
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0435D08
Length = 148912
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 86123 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 86182
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 86183 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 86242
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 86243 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 86283
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 95359 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 95300
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 95299 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 95240
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 95239 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 95199
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 82248 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 82307
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 82308 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 82367
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 82368 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 82427
Query: 383 tcccgcc 389
|||||||
Sbjct: 82428 tcccgcc 82434
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 101651 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 101592
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 101591 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 101532
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 101531 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 101472
Query: 383 tcccgcc 389
|||||||
Sbjct: 101471 tcccgcc 101465
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 95061 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 95002
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 95001 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 94942
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 94941 cggcgacgtgctgatgacg 94923
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 86341 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 86400
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 86401 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 86460
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 86461 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 86520
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 86521 agcgcctcccgccgcttccccggcgacgtgctgatgacg 86559
Score = 56.0 bits (28), Expect = 2e-005
Identities = 148/188 (78%)
Strand = Plus / Plus
Query: 445 accatctggcccatcggcttgagcaggtccagcagcggcacgacagggtggtcggccgac 504
|||||||| ||| | ||||| ||||| |||||||||||| | ||||| | || |||
Sbjct: 82490 accatctgccccttgggcttcagcagcgacagcagcggcaccagcgggtgccccgcggac 82549
Query: 505 accgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcgcgg 564
||||||||||||| ||||||| || ||||||||||| |||| |||| |||||||
Sbjct: 82550 accgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatcccctcgccgtcgcgg 82609
Query: 565 ctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagcgac 624
|| ||||||||||||||| ||||| || | || ||||| |||||||| || |||||
Sbjct: 82610 ctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgac 82669
Query: 625 gtgctgat 632
| ||||||
Sbjct: 82670 gagctgat 82677
>gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019921, whole
genome shotgun sequence
Length = 37159
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 7008 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 7067
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 7068 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 7127
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 7128 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 7168
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 16253 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 16194
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 16193 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 16134
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 16133 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 16093
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 3131 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 3190
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 3191 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 3250
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 3251 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 3310
Query: 383 tcccgcc 389
|||||||
Sbjct: 3311 tcccgcc 3317
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 22545 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 22486
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 22485 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 22426
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 22425 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 22366
Query: 383 tcccgcc 389
|||||||
Sbjct: 22365 tcccgcc 22359
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 15955 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 15896
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 15895 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 15836
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 15835 cggcgacgtgctgatgacg 15817
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 7226 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 7285
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 7286 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 7345
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 7346 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 7405
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 7406 agcgcctcccgccgcttccccggcgacgtgctgatgacg 7444
Score = 46.1 bits (23), Expect = 0.023
Identities = 104/131 (79%)
Strand = Plus / Plus
Query: 502 gacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcg 561
|||||||||||||||| ||||||| || ||||||||||| |||| || | ||||
Sbjct: 3432 gacaccgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatccccttgccgtcg 3491
Query: 562 cggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagc 621
||||| ||||||||||||||| ||||| || | || ||||| |||||||| || ||
Sbjct: 3492 cggctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggc 3551
Query: 622 gacgtgctgat 632
|||| ||||||
Sbjct: 3552 gacgagctgat 3562
>ref|NT_107083.1| Oryza sativa (japonica cultivar-group)
Length = 598321
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 380432 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 380491
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 380492 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 380551
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 380552 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 380592
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 389668 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 389609
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 389608 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 389549
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 389548 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 389508
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 376557 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 376616
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 376617 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 376676
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 376677 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 376736
Query: 383 tcccgcc 389
|||||||
Sbjct: 376737 tcccgcc 376743
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 395960 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 395901
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 395900 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 395841
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 395840 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 395781
Query: 383 tcccgcc 389
|||||||
Sbjct: 395780 tcccgcc 395774
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 389370 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 389311
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 389310 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 389251
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 389250 cggcgacgtgctgatgacg 389232
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 380650 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 380709
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 380710 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 380769
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 380770 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 380829
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 380830 agcgcctcccgccgcttccccggcgacgtgctgatgacg 380868
Score = 56.0 bits (28), Expect = 2e-005
Identities = 148/188 (78%)
Strand = Plus / Plus
Query: 445 accatctggcccatcggcttgagcaggtccagcagcggcacgacagggtggtcggccgac 504
|||||||| ||| | ||||| ||||| |||||||||||| | ||||| | || |||
Sbjct: 376799 accatctgccccttgggcttcagcagcgacagcagcggcaccagcgggtgccccgcggac 376858
Query: 505 accgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcgcgg 564
||||||||||||| ||||||| || ||||||||||| |||| |||| |||||||
Sbjct: 376859 accgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatcccctcgccgtcgcgg 376918
Query: 565 ctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagcgac 624
|| ||||||||||||||| ||||| || | || ||||| |||||||| || |||||
Sbjct: 376919 ctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgac 376978
Query: 625 gtgctgat 632
| ||||||
Sbjct: 376979 gagctgat 376986
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 3325694 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 3325753
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 3325754 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 3325813
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 3325814 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 3325854
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 3334939 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 3334880
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 3334879 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 3334820
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 3334819 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 3334779
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 3321817 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 3321876
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 3321877 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 3321936
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 3321937 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 3321996
Query: 383 tcccgcc 389
|||||||
Sbjct: 3321997 tcccgcc 3322003
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 3341231 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 3341172
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 3341171 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 3341112
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 3341111 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 3341052
Query: 383 tcccgcc 389
|||||||
Sbjct: 3341051 tcccgcc 3341045
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 3334641 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 3334582
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 3334581 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 3334522
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 3334521 cggcgacgtgctgatgacg 3334503
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 3325912 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 3325971
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 3325972 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 3326031
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 3326032 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 3326091
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 3326092 agcgcctcccgccgcttccccggcgacgtgctgatgacg 3326130
Score = 46.1 bits (23), Expect = 0.023
Identities = 104/131 (79%)
Strand = Plus / Plus
Query: 502 gacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcg 561
|||||||||||||||| ||||||| || ||||||||||| |||| || | ||||
Sbjct: 3322118 gacaccgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatccccttgccgtcg 3322177
Query: 562 cggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagc 621
||||| ||||||||||||||| ||||| || | || ||||| |||||||| || ||
Sbjct: 3322178 cggctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggc 3322237
Query: 622 gacgtgctgat 632
|||| ||||||
Sbjct: 3322238 gacgagctgat 3322248
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 12799505 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 12799564
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 12799565 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 12799624
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 12799625 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 12799665
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 12808750 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 12808691
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 12808690 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 12808631
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 12808630 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 12808590
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 12795628 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 12795687
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 12795688 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 12795747
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 12795748 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 12795807
Query: 383 tcccgcc 389
|||||||
Sbjct: 12795808 tcccgcc 12795814
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 12815042 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 12814983
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 12814982 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 12814923
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 12814922 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 12814863
Query: 383 tcccgcc 389
|||||||
Sbjct: 12814862 tcccgcc 12814856
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 12808452 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 12808393
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 12808392 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 12808333
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 12808332 cggcgacgtgctgatgacg 12808314
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 12799723 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 12799782
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 12799783 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 12799842
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 12799843 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 12799902
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 12799903 agcgcctcccgccgcttccccggcgacgtgctgatgacg 12799941
Score = 46.1 bits (23), Expect = 0.023
Identities = 104/131 (79%)
Strand = Plus / Plus
Query: 502 gacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcg 561
|||||||||||||||| ||||||| || ||||||||||| |||| || | ||||
Sbjct: 12795929 gacaccgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatccccttgccgtcg 12795988
Query: 562 cggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagc 621
||||| ||||||||||||||| ||||| || | || ||||| |||||||| || ||
Sbjct: 12795989 cggctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggc 12796048
Query: 622 gacgtgctgat 632
|||| ||||||
Sbjct: 12796049 gacgagctgat 12796059
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 129 bits (65), Expect = 2e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 13932446 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 13932505
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 13932506 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 13932565
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 13932566 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 13932606
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 13941682 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 13941623
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 13941622 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 13941563
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 13941562 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 13941522
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 13928571 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 13928630
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 13928631 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 13928690
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 13928691 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 13928750
Query: 383 tcccgcc 389
|||||||
Sbjct: 13928751 tcccgcc 13928757
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 13947974 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 13947915
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 13947914 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 13947855
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 13947854 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 13947795
Query: 383 tcccgcc 389
|||||||
Sbjct: 13947794 tcccgcc 13947788
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 13941384 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 13941325
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 13941324 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 13941265
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 13941264 cggcgacgtgctgatgacg 13941246
Score = 85.7 bits (43), Expect = 3e-014
Identities = 175/219 (79%)
Strand = Plus / Plus
Query: 418 agcggcttggtgggcaggccgacgacgaccatctggcccatcggcttgagcaggtccagc 477
|||||| |||| ||| |||||||| |||||||| |||||||||| | ||| | | |
Sbjct: 13932664 agcggcctggtcggcgcgccgacgaacaccatctgcgccatcggcttcatcagtgcgaac 13932723
Query: 478 agcggcacgacagggtggtcggccgacaccgtgtcgatgacgccgtccaaggtgcccgcc 537
|||||| |||| ||||| ||||||||||||| || || ||||||| ||||||||||
Sbjct: 13932724 agcggcgcgaccgggtgccacgccgacaccgtgttgaggatcccgtccatggtgcccgcc 13932783
Query: 538 gccgccctcatctgctcggggtcgcggctgaccaggaacgcgtcggcaccgaggcggccg 597
|||||| |||||| | | |||||||||||| |||||| ||||||| |||||| | |
Sbjct: 13932784 gccgccgccatctggcccgcgtcgcggctgacgaggaactcgtcggcgccgaggtgctcc 13932843
Query: 598 agggcctcgtcccgcttgcccagcgacgtgctgatgacg 636
|| ||||| |||||| ||| |||||||||||||||||
Sbjct: 13932844 agcgcctcccgccgcttccccggcgacgtgctgatgacg 13932882
Score = 56.0 bits (28), Expect = 2e-005
Identities = 148/188 (78%)
Strand = Plus / Plus
Query: 445 accatctggcccatcggcttgagcaggtccagcagcggcacgacagggtggtcggccgac 504
|||||||| ||| | ||||| ||||| |||||||||||| | ||||| | || |||
Sbjct: 13928813 accatctgccccttgggcttcagcagcgacagcagcggcaccagcgggtgccccgcggac 13928872
Query: 505 accgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcgcgg 564
||||||||||||| ||||||| || ||||||||||| |||| |||| |||||||
Sbjct: 13928873 accgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatcccctcgccgtcgcgg 13928932
Query: 565 ctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagcgac 624
|| ||||||||||||||| ||||| || | || ||||| |||||||| || |||||
Sbjct: 13928933 ctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgac 13928992
Query: 625 gtgctgat 632
| ||||||
Sbjct: 13928993 gagctgat 13929000
>gb|CB646345.1|CB646345 OSJNEb08M02.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08M02 3', mRNA sequence
Length = 776
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 292 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 351
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 352 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 411
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 412 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 452
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 590 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 649
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 650 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 709
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 710 cggcgacgtgctgatgacg 728
>gb|CB646878.1|CB646878 OSJNEb09J03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09J03 3', mRNA sequence
Length = 750
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 187 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 246
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 247 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 306
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 307 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 347
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 485 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 544
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 545 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 604
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 605 cggcgacgtgctgatgacg 623
>gb|CB648706.1|CB648706 OSJNEb12D16.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12D16 5', mRNA sequence
Length = 751
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 113 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 172
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 173 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 232
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 233 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 273
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 411 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 470
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 471 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 530
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 531 cggcgacgtgctgatgacg 549
>gb|CB653589.1|CB653589 OSJNEc04M09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04M09 3', mRNA sequence
Length = 773
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 221 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 280
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 281 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 340
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 341 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 381
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 519 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 578
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 579 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 638
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 639 cggcgacgtgctgatgacg 657
>gb|CB654463.1|CB654463 OSJNEc07A05.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07A05 5', mRNA sequence
Length = 761
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 377 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 436
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 437 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 496
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 497 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 537
Score = 48.1 bits (24), Expect = 0.006
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 675 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 734
Query: 558 gtcgcggctgac 569
||||||||||||
Sbjct: 735 gtcgcggctgac 746
>gb|CB655788.1|CB655788 OSJNEc09I09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I09 3', mRNA sequence
Length = 787
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 231 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 290
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 291 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 350
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 351 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 391
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 529 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 588
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 589 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 648
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 649 cggcgacgtgctgatgacg 667
>gb|CB657550.1|CB657550 OSJNEc12P22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12P22 3', mRNA sequence
Length = 815
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 383 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 442
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 443 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 502
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 503 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 543
Score = 77.8 bits (39), Expect = 7e-012
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 681 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 740
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 741 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 800
Query: 618 cagcgacgtgctgat 632
| |||||||||||||
Sbjct: 801 cggcgacgtgctgat 815
>gb|CB665927.1|CB665927 OSJNEd12J17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12J17 3', mRNA sequence
Length = 738
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 188 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 247
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 248 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 307
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 308 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 348
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 486 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 545
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 546 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 605
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 606 cggcgacgtgctgatgacg 624
>gb|CB673521.1|CB673521 OSJNEe08B11.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08B11 3', mRNA sequence
Length = 760
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 188 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 247
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 248 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 307
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 308 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 348
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 486 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 545
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 546 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 605
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 606 cggcgacgtgctgatgacg 624
>gb|CB674968.1|CB674968 OSJNEe10F17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10F17 3', mRNA sequence
Length = 776
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 364 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 423
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 424 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 483
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 484 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 524
Score = 67.9 bits (34), Expect = 6e-009
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 662 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 721
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgagg 591
|||||||||||| |||||| ||||||| ||||||
Sbjct: 722 gtcgcggctgacgaggaactcgtcggcgccgagg 755
>gb|CB681488.1|CB681488 OSJNEf07M17.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07M17 3', mRNA sequence
Length = 743
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 381 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 440
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 441 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 500
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 501 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 541
Score = 44.1 bits (22), Expect = 0.091
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgcc 543
|||||||||||||| || || ||||||| |||| |||||||||||
Sbjct: 679 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgcc 724
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full
insert sequence
Length = 1916
Score = 121 bits (61), Expect = 5e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | |||||||||| |||| || |||| |
Sbjct: 1672 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 1613
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 1612 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 1553
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 1552 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 1512
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 1374 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 1315
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 1314 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 1255
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 1254 cggcgacgtgctgatgacg 1236
>gb|CA758951.1|CA758951 BR030033000_PLATE_H05_40_046.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030033000_PLATE_H05_40_046.ab1 similar to NP_195510.1|
(NM_119958) cinnamyl alcohol dehydrogenase -like
protein, LCADa [Arabidopsis thaliana]
gi|7430941|pir|T05624 cinnamyl-alcohol dehydrogenase (EC
1.1.1.195) LCAD..., mRNA sequence
Length = 494
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 195 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 254
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 255 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 314
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 315 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 374
Query: 383 tcccgcc 389
|||||||
Sbjct: 375 tcccgcc 381
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full
insert sequence
Length = 1407
Score = 117 bits (59), Expect = 8e-024
Identities = 155/187 (82%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 1166 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 1107
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| ||||||| | |||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 1106 cggcgttgacgtcgcccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 1047
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| ||| | |||||||| |||||||
Sbjct: 1046 cgaagtccagcatcgcctggcactcggccacgctgcccccgccgctcccggcgacgcgct 987
Query: 383 tcccgcc 389
|||||||
Sbjct: 986 tcccgcc 980
Score = 56.0 bits (28), Expect = 2e-005
Identities = 148/188 (78%)
Strand = Plus / Minus
Query: 445 accatctggcccatcggcttgagcaggtccagcagcggcacgacagggtggtcggccgac 504
|||||||| ||| | ||||| ||||| |||||||||||| | ||||| | || |||
Sbjct: 924 accatctgccccttgggcttcagcagcgacagcagcggcaccagcgggtgccccgcggac 865
Query: 505 accgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggggtcgcgg 564
||||||||||||| ||||||| || ||||||||||| |||| |||| |||||||
Sbjct: 864 accgtgtcgatgatcccgtccatcgtcgccgccgccgccgccatcccctcgccgtcgcgg 805
Query: 565 ctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcccagcgac 624
|| ||||||||||||||| ||||| || | || ||||| |||||||| || |||||
Sbjct: 804 ctcgacaggaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgac 745
Query: 625 gtgctgat 632
| ||||||
Sbjct: 744 gagctgat 737
>gb|CB653588.1|CB653588 OSJNEc04M09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04M09 5', mRNA sequence
Length = 632
Score = 113 bits (57), Expect = 1e-022
Identities = 120/141 (85%)
Strand = Plus / Plus
Query: 220 acgaagcggtacctgacatcgttcctctctaggcgctggatggcggtattgacgtagtcc 279
||||||||||| | |||||||||| |||| || |||| || || || ||||||||||||
Sbjct: 238 acgaagcggtagcggacatcgttcttctccagccgctccatcgccgtgttgacgtagtcc 297
Query: 280 atcccgacgacctccacatccgcggtgatcccgtgctcgccggcaaagtcgagcatggcc 339
||| || ||||||||| || || ||||| |||||||||||||| |||||||||||||||
Sbjct: 298 atcttgatgacctccacctcggcagtgatgccgtgctcgccggcgaagtcgagcatggcc 357
Query: 340 tggcactccccgacgccgccg 360
||||| |||| || |||||||
Sbjct: 358 tggcagtccctgatgccgccg 378
Score = 67.9 bits (34), Expect = 6e-009
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 516 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 575
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgagg 591
|||||||||||| |||||| ||||||| ||||||
Sbjct: 576 gtcgcggctgacgaggaactcgtcggcgccgagg 609
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full
insert sequence
Length = 2015
Score = 113 bits (57), Expect = 1e-022
Identities = 135/161 (83%)
Strand = Plus / Plus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| || ||||||| ||||||||||| | ||| |||||| |||| || |||| |
Sbjct: 125 tgctgccggcaacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 184
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| || || ||||||||||||||| || ||||||||| || || ||||| ||||||||||
Sbjct: 185 tcgccgtgttgacgtagtccatcttgatgacctccacctcggcagtgatgccgtgctcgc 244
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 245 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 285
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 423 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 482
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 483 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 542
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 543 cggcgacgtgctgatgacg 561
>gb|CB655414.1|CB655414 OSJNEc08N04.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc08N04 3', mRNA sequence
Length = 771
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 235 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 294
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 295 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 354
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 355 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 414
Query: 383 tcccgcc 389
|||||||
Sbjct: 415 tcccgcc 421
>gb|CB655790.1|CB655790 OSJNEc09I13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I13 3', mRNA sequence
Length = 808
Score = 109 bits (55), Expect = 2e-021
Identities = 154/187 (82%)
Strand = Plus / Plus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| ||||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 467 tgccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 526
Query: 263 cggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgccgg 322
||| |||||| |||||| |||| ||||| || ||||||| ||| |||||||||||||
Sbjct: 527 cggcgttgacggcgtccatggcgaccacctcgacgtccgcggcgatgccgtgctcgccgg 586
Query: 323 caaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgct 382
| ||||| ||||| ||||||||||| | |||| ||| || | ||||||| |||||||
Sbjct: 587 cgaagtccagcatcgcctggcactcggccacgctgcccacgccgttcccggcgacgcgct 646
Query: 383 tcccgcc 389
|||||||
Sbjct: 647 tcccgcc 653
>gb|AU101083.1|AU101083 AU101083 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0754, mRNA sequence
Length = 591
Score = 107 bits (54), Expect = 7e-021
Identities = 135/161 (83%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 200 tgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgga 259
||||||| |||||||||| ||||||||||| || |||||| |||| || |||| |
Sbjct: 351 tgctgccggcgacgtcgatgacgaagcggtaggn-acgtcgttcttctccagccgctcca 293
Query: 260 tggcggtattgacgtagtccatcccgacgacctccacatccgcggtgatcccgtgctcgc 319
| ||||| ||||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 292 tcgcggtgttgacgtagtccatcttgatcacctccacctcggcggtgattccgtgctcgc 233
Query: 320 cggcaaagtcgagcatggcctggcactccccgacgccgccg 360
|||| |||||||||||||||||||| |||| || |||||||
Sbjct: 232 cggcgaagtcgagcatggcctggcagtccctgatgccgccg 192
Score = 42.1 bits (21), Expect = 0.36
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 499 gccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgcc 543
||||||||||||| || || ||||||| ||||||||| ||||||
Sbjct: 54 gccgacaccgtgttgaggatcccgtccatggtgcccgcagccgcc 10
>gb|AU077742.1|AU077742 AU077742 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10143_2Z, mRNA sequence
Length = 470
Score = 93.7 bits (47), Expect = 1e-016
Identities = 153/188 (81%), Gaps = 1/188 (0%)
Strand = Plus / Minus
Query: 203 tgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctggatgg 262
|||| |||||||||| |||||||||||||| || ||||||||||| ||||| || ||
Sbjct: 201 tgccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgaggcggccgaggg 142
Query: 263 cggtattgacgtagtccatcccgac-gacctccacatccgcggtgatcccgtgctcgccg 321
||| ||||||| | |||| |||| ||||| | ||||||| ||| ||||||||||||
Sbjct: 141 cggcgttgacgtcgcccatggcgaccnacctcgangtccgcggcgatgccgtgctcgccg 82
Query: 322 gcaaagtcgagcatggcctggcactccccgacgccgccgccggcactcccggccacgcgc 381
|| ||||| ||||| ||||||||||| | | || ||| ||| | |||||||| ||||||
Sbjct: 81 gcgaagtccagcatcgcctggcactcggccangctgcccccgccgctcccggcgacgcgc 22
Query: 382 ttcccgcc 389
||||||||
Sbjct: 21 ttcccgcc 14
>gb|CB655787.1|CB655787 OSJNEc09I09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09I09 5', mRNA sequence
Length = 796
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 688 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 629
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 628 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 569
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 568 cggcgacgtgctgatgacg 550
>gb|CB657549.1|CB657549 OSJNEc12P22.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12P22 5', mRNA sequence
Length = 799
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 632 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 573
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 572 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 513
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 512 cggcgacgtgctgatgacg 494
>gb|CB665926.1|CB665926 OSJNEd12J17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12J17 5', mRNA sequence
Length = 718
Score = 85.7 bits (43), Expect = 3e-014
Identities = 115/139 (82%)
Strand = Plus / Minus
Query: 498 ggccgacaccgtgtcgatgacgccgtccaaggtgcccgccgccgccctcatctgctcggg 557
|||||||||||||| || || ||||||| |||| ||||||||||| |||||| | |
Sbjct: 495 ggccgacaccgtgttgaggatcccgtccatggtggccgccgccgccgccatctggcccgc 436
Query: 558 gtcgcggctgaccaggaacgcgtcggcaccgaggcggccgagggcctcgtcccgcttgcc 617
|||||||||||| |||||| ||||||| |||||| | | || ||||| | |||||| ||
Sbjct: 435 gtcgcggctgacgaggaactcgtcggcgccgaggtgctccagtgcctcctgccgcttccc 376
Query: 618 cagcgacgtgctgatgacg 636
| |||||||||||||||||
Sbjct: 375 cggcgacgtgctgatgacg 357
Score = 83.8 bits (42), Expect = 1e-013
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 275 agtccatcccgacgacctccacatccgcggtgatcccgtgctcgccggcaaagtcgagca 334
|||||||| || ||||||||| || || ||||| |||||||||||||| ||||||||||
Sbjct: 718 agtccatcttgatgacctccacctcggcagtgatgccgtgctcgccggcgaagtcgagca 659
Query: 335 tggcctggcactccccgacgccgccg 360
|||||||||| |||| || |||||||
Sbjct: 658 tggcctggcagtccctgatgccgccg 633
>gb|AU163932.1|AU163932 AU163932 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11507, mRNA sequence
Length = 541
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 339 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 280
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 279 agggcctggttgacgtagtccatcttgacgacctc 245
>gb|AU164498.1|AU164498 AU164498 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0118, mRNA sequence
Length = 549
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 339 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 280
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 279 agggcctggttgacgtagtccatcttgacgacctc 245
>gb|CB682900.1|CB682900 OSJNEf10K22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10K22 5', mRNA sequence
Length = 412
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 231 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 172
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 171 agggcctggttgacgtagtccatcttgacgacctc 137
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full
insert sequence
Length = 1103
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 939 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 880
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 879 agggcctggttgacgtagtccatcttgacgacctc 845
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full
insert sequence
Length = 1376
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 1195 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 1136
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 1135 agggcctggttgacgtagtccatcttgacgacctc 1101
>dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD mRNA for cinnamyl
alcohol dehydrogenase, partial cds
Length = 653
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 446 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcaaggcgctcg 387
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 386 agggcctggttgacgtagtccatcttgacgacctc 352
>gb|AACV01003516.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003516, whole
genome shotgun sequence
Length = 10487
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 6019 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 6078
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 6079 agggcctggttgacgtagtccatcttgacgacctc 6113
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1387
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 1202 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 1143
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 1142 agggcctggttgacgtagtccatcttgacgacctc 1108
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 242418 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 242477
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 242478 agggcctggttgacgtagtccatcttgacgacctc 242512
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA
Length = 1396
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 1196 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 1137
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 1136 agggcctggttgacgtagtccatcttgacgacctc 1102
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1145_F01
Length = 113755
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 15085 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 15144
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 15145 agggcctggttgacgtagtccatcttgacgacctc 15179
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1073_F05
Length = 124252
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 112505 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 112564
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 112565 agggcctggttgacgtagtccatcttgacgacctc 112599
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 4960621 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 4960680
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 4960681 agggcctggttgacgtagtccatcttgacgacctc 4960715
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 4960621 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 4960680
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 4960681 agggcctggttgacgtagtccatcttgacgacctc 4960715
Score = 42.1 bits (21), Expect = 0.36
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 387 gccggcgacgaggctgaaggcaggc 411
|||||||||||||| ||||||||||
Sbjct: 23197328 gccggcgacgaggcagaaggcaggc 23197304
>tpg|BK003969.1| TPA: Oryza sativa (japonica cultivar-group) cinnamyl alcohol
dehydrogenase (CAD2) gene, complete cds
Length = 4183
Score = 61.9 bits (31), Expect = 4e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 199 ttgctgcccgcgacgtcgacaacgaagcggtacctgacatcgttcctctctaggcgctgg 258
|||||||| ||||||||||| ||||||||||| | ||| ||||| | ||| ||||||| |
Sbjct: 3814 ttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctcg 3755
Query: 259 atggcggtattgacgtagtccatcccgacgacctc 293
| ||| ||||||||||||||| |||||||||
Sbjct: 3754 agggcctggttgacgtagtccatcttgacgacctc 3720
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,045,705
Number of Sequences: 438736
Number of extensions: 2045705
Number of successful extensions: 15982
Number of sequences better than 0.5: 69
Number of HSP's better than 0.5 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15387
Number of HSP's gapped (non-prelim): 555
length of query: 636
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 615
effective length of database: 2,791,206,460
effective search space: 1716591972900
effective search space used: 1716591972900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)