BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943885.2.1
(581 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK106302.1| Oryza sativa (japonica cultivar-group) cDNA... 70 1e-009
ref|XM_474840.1| Oryza sativa (japonica cultivar-group), p... 70 1e-009
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 66 2e-008
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 66 2e-008
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 66 2e-008
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 66 2e-008
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 66 2e-008
gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (j... 66 2e-008
gb|CF316226.1|CF316226 HD--05-H01.b1 OsHDAC1-overexpressing... 66 2e-008
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 66 2e-008
gb|AACV01008733.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 66 2e-008
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromoso... 66 2e-008
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CF314166.1|CF314166 HD--02-J11.g1 OsHDAC1-overexpressing... 64 9e-008
gb|CF320817.1|CF320817 HD--11-N12.g1 OsHDAC1-overexpressing... 64 9e-008
gb|AACV01008725.1| Oryza sativa (japonica cultivar-group) c... 64 9e-008
gb|BF889487.1|BF889487 EST056 Subtracted cDNA library of JA... 62 4e-007
gb|CF317485.1|CF317485 HD--07-D05.g1 OsHDAC1-overexpressing... 62 4e-007
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 62 4e-007
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 62 4e-007
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
gb|AQ861812.1|AQ861812 nbeb0017J05r CUGI Rice BAC Library (... 60 1e-006
gb|AQ913482.1|AQ913482 nbeb0041B12r CUGI Rice BAC Library (... 60 1e-006
gb|AZ130075.1|AZ130075 OSJNBb0102P10r CUGI Rice BAC Library... 60 1e-006
gb|C28980.1|C28980 C28980 Rice callus cDNA Oryza sativa (ja... 60 1e-006
dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AK110892.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|AACV01005441.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA 60 1e-006
ref|XM_474839.1| Oryza sativa (japonica cultivar-group), p... 60 1e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 60 1e-006
ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-... 60 1e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|CB641583.1|CB641583 OSJNEb01E21.r OSJNEb Oryza sativa (j... 58 5e-006
gb|CB648148.1|CB648148 OSJNEb11G14.r OSJNEb Oryza sativa (j... 58 5e-006
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 58 5e-006
gb|AU067881.2|AU067881 AU067881 Rice callus Oryza sativa (j... 58 5e-006
dbj|AP005178.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA... 58 5e-006
dbj|AP004045.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AP005008.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AP006525.2| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01003571.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01008722.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01011018.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01015581.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
gb|AACV01020395.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
ref|NM_186853.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-006
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 58 5e-006
ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-006
ref|XM_476066.1| Oryza sativa (japonica cultivar-group), p... 58 5e-006
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 58 5e-006
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 58 5e-006
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 58 5e-006
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 58 5e-006
dbj|AP005183.3| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 58 5e-006
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromoso... 58 5e-006
gb|AC130610.3| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
gb|CA754538.1|CA754538 BR030001000_PLATE_C03_19_020.ab1 OA ... 56 2e-005
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 56 2e-005
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 56 2e-005
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 56 2e-005
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 56 2e-005
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 56 2e-005
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 56 2e-005
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 56 2e-005
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 56 2e-005
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 56 2e-005
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 56 2e-005
gb|CF320816.1|CF320816 HD--11-N12.b1 OsHDAC1-overexpressing... 56 2e-005
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 56 2e-005
dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chro... 56 2e-005
dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
dbj|AP005186.4| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 56 2e-005
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|AACV01004763.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 56 2e-005
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 56 2e-005
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (j... 54 9e-005
gb|CB646298.1|CB646298 OSJNEb08K19.f OSJNEb Oryza sativa (j... 54 9e-005
gb|CB654109.1|CB654109 OSJNEc05M06.r OSJNEc Oryza sativa (j... 54 9e-005
dbj|AK069049.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK105674.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK109506.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK110950.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
gb|AC079887.17| Oryza sativa (japonica cultivar-group) chro... 54 9e-005
dbj|AP004864.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AACV01004348.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01007956.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
ref|XM_465758.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|XM_469831.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|XM_474838.1| Oryza sativa (japonica cultivar-group), p... 54 9e-005
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 54 9e-005
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 54 9e-005
ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-... 54 9e-005
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|AQ159266.1|AQ159266 nbxb0013E02r CUGI Rice BAC Library O... 52 3e-004
gb|AQ274007.1|AQ274007 nbxb0032I07f CUGI Rice BAC Library O... 52 3e-004
gb|AQ577711.1|AQ577711 nbxb0091F07r CUGI Rice BAC Library O... 52 3e-004
gb|AU032902.1|AU032902 AU032902 Rice green shoot Oryza sati... 52 3e-004
gb|AU078176.1|AU078176 AU078176 Rice callus Oryza sativa (j... 52 3e-004
gb|CB668004.1|CB668004 OSJNEd15K03.r OSJNEd Oryza sativa (j... 52 3e-004
dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chro... 52 3e-004
dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chro... 52 3e-004
dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbar... 52 3e-004
dbj|AP004557.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 ... 52 3e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_107236.1| Oryza sativa (japonica cultivar-group) 52 3e-004
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
dbj|AP003504.1| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AACV01001755.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01002303.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01004762.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01004764.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01006675.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01008244.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01009276.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01009340.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01009341.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01009342.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01013586.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01018758.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 52 3e-004
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP006050.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
ref|NM_191567.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_463383.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA 52 3e-004
ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA 52 3e-004
ref|XM_471794.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_471823.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_471850.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_471859.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_471860.1| Oryza sativa (japonica cultivar-group), p... 52 3e-004
ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA 52 3e-004
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_107196.1| Oryza sativa (japonica cultivar-group) 52 3e-004
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 52 3e-004
dbj|AP003617.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 52 3e-004
dbj|AP003560.2| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 52 3e-004
emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromoso... 52 3e-004
emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromoso... 52 3e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 52 3e-004
gb|AQ843589.1|AQ843589 nbxb0024I17f CUGI Rice BAC Library O... 50 0.001
gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (... 50 0.001
dbj|AG215034.1| Oryza sativa (japonica cultivar-group) DNA,... 50 0.001
gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (j... 50 0.001
gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (j... 50 0.001
gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (j... 50 0.001
dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK071136.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK072018.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK103303.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK106006.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005501.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP004560.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005515.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP003754.5| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
dbj|AP005915.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AACV01000282.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01003584.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01003585.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01009281.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01015542.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01016235.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01016252.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01017371.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_463421.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_469830.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_471795.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_471848.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_474827.1| Oryza sativa (japonica cultivar-group), p... 50 0.001
ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478130.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478140.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478166.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_480272.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|XM_506345.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.001
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 50 0.001
ref|NM_191604.2| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
dbj|AP005190.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP004348.4| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP002523.1| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|AQ288480.1|AQ288480 nbxb0033O05f CUGI Rice BAC Library O... 48 0.005
dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.005
gb|AC131374.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbar... 48 0.005
gb|AC144738.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|AACV01001757.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01002304.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01005042.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01008726.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01011011.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01016314.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
gb|AACV01021221.1| Oryza sativa (japonica cultivar-group) c... 48 0.005
ref|NM_191572.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|NM_195768.1| Oryza sativa (japonica cultivar-group) put... 48 0.005
ref|NM_195769.1| Oryza sativa (japonica cultivar-group) put... 48 0.005
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 48 0.005
ref|XM_474826.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|XM_474828.1| Oryza sativa (japonica cultivar-group), p... 48 0.005
ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|AC158405.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 48 0.005
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.005
gb|AU092368.1|AU092368 AU092368 Rice callus Oryza sativa (j... 46 0.021
gb|AU097595.1|AU097595 AU097595 Rice callus Oryza sativa (j... 46 0.021
gb|AC108756.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.021
dbj|AP003997.1| Oryza sativa (japonica cultivar-group) chro... 46 0.021
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 46 0.021
dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK063342.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK064298.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK065450.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK071910.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK099026.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK099365.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK103129.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK103355.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK105563.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK105917.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AK119562.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.021
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP004300.3| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP004727.2| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP003488.3| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP002843.2| Oryza sativa (japonica cultivar-group) geno... 46 0.021
gb|AACV01001845.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01002298.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01002299.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01002757.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01003715.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01013318.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01016995.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01018756.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01020286.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01020288.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01023672.1| Oryza sativa (japonica cultivar-group) c... 46 0.021
gb|AACV01028627.1| Oryza sativa (japonica cultivar-group) C... 46 0.021
gb|AC108761.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.021
ref|NM_190780.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|NM_191560.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|NM_191561.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|NM_191569.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|NM_192834.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|NM_192840.1| Oryza sativa (japonica cultivar-group), p... 46 0.021
ref|XM_479471.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.021
ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.021
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 46 0.021
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 46 0.021
dbj|AP003235.2| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP003286.3| Oryza sativa (japonica cultivar-group) geno... 46 0.021
dbj|AP003328.3| Oryza sativa (japonica cultivar-group) geno... 46 0.021
gb|CH401265.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.021
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.021
gb|AQ689190.1|AQ689190 nbxb0079G15r CUGI Rice BAC Library O... 44 0.083
gb|CB648866.1|CB648866 OSJNEb12H17.r OSJNEb Oryza sativa (j... 44 0.083
gb|CB656161.1|CB656161 OSJNEc10C23.r OSJNEc Oryza sativa (j... 44 0.083
dbj|AP003744.1| Oryza sativa (japonica cultivar-group) chro... 44 0.083
dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK066551.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK068040.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AK108114.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.083
dbj|AP004341.2| Oryza sativa (japonica cultivar-group) geno... 44 0.083
gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 ... 44 0.083
gb|AACV01005446.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01007694.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01009084.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01009869.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01010075.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01016313.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01016816.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
gb|AACV01017370.1| Oryza sativa (japonica cultivar-group) c... 44 0.083
ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|XM_471491.1| Oryza sativa (japonica cultivar-group), p... 44 0.083
ref|XM_471822.1| Oryza sativa (japonica cultivar-group), p... 44 0.083
ref|XM_472671.1| Oryza sativa (japonica cultivar-group), p... 44 0.083
ref|XM_473094.1| Oryza sativa (japonica cultivar-group), p... 44 0.083
ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|XM_479187.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.083
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 44 0.083
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 44 0.083
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 44 0.083
ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.083
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 44 0.083
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 44 0.083
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.083
emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromoso... 44 0.083
emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromoso... 44 0.083
emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromoso... 44 0.083
emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromoso... 44 0.083
gb|AQ860883.1|AQ860883 nbeb0015L24f CUGI Rice BAC Library (... 42 0.33
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 42 0.33
gb|AQ868140.1|AQ868140 nbeb0021H12r CUGI Rice BAC Library (... 42 0.33
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 42 0.33
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 42 0.33
gb|AU077934.1|AU077934 AU077934 Rice callus Oryza sativa (j... 42 0.33
gb|AU094112.1|AU094112 AU094112 Rice panicle at flowering s... 42 0.33
gb|CB637106.1|CB637106 OSJNEa03E20.r OSJNEa Oryza sativa (j... 42 0.33
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 42 0.33
gb|CB647590.1|CB647590 OSJNEb10J08.r OSJNEb Oryza sativa (j... 42 0.33
gb|CB653368.1|CB653368 OSJNEc04F11.r OSJNEc Oryza sativa (j... 42 0.33
gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (j... 42 0.33
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 42 0.33
dbj|AK060146.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK060228.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK106930.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK109780.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 ... 42 0.33
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 42 0.33
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 42 0.33
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 42 0.33
dbj|AP005056.2| Oryza sativa (japonica cultivar-group) geno... 42 0.33
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01005603.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01007731.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01007732.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01008641.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01016231.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01016244.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01016246.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01016249.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01021220.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|NM_195766.1| Oryza sativa (japonica cultivar-group) hyp... 42 0.33
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_469427.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_469430.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_469828.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478126.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478152.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478153.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478159.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 42 0.33
ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-... 42 0.33
ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-... 42 0.33
ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-... 42 0.33
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|AC146522.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|AC091670.7| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
>dbj|AK106302.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C06, full
insert sequence
Length = 1842
Score = 69.9 bits (35), Expect = 1e-009
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctg 187
||||| ||||| || || ||||| |||||||| || ||||||||||||||||| ||| ||
Sbjct: 1076 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggttgtttcttg 1135
Query: 188 acgcactgcgggtggaactcgac 210
||||||| || |||||||||||
Sbjct: 1136 tcgcactgtggatggaactcgac 1158
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 1388 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 1447
Query: 491 tatt 494
||||
Sbjct: 1448 tatt 1451
>ref|XM_474840.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1401
Score = 69.9 bits (35), Expect = 1e-009
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctg 187
||||| ||||| || || ||||| |||||||| || ||||||||||||||||| ||| ||
Sbjct: 1018 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggttgtttcttg 1077
Query: 188 acgcactgcgggtggaactcgac 210
||||||| || |||||||||||
Sbjct: 1078 tcgcactgtggatggaactcgac 1100
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 1330 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 1389
Query: 491 tatt 494
||||
Sbjct: 1390 tatt 1393
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 896 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 955
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 956 ggtccaatgagg 967
>gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03O11 5', mRNA sequence
Length = 778
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 457 tgcttcctgacgcactgcgggtggaactcgacg 425
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 397 atggtggcgctgccgcagtggacggaccagccga 364
>gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04H10 3', mRNA sequence
Length = 800
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 541 tgcttcctgacgcactgcgggtggaactcgacg 509
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 481 atggtggcgctgccgcagtggacggaccagccga 448
>gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J03 3', mRNA sequence
Length = 755
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 453 tgcttcctgacgcactgcgggtggaactcgacg 421
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 393 atggtggcgctgccgcagtggacggaccagccga 360
>gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J04 3', mRNA sequence
Length = 755
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 453 tgcttcctgacgcactgcgggtggaactcgacg 421
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 393 atggtggcgctgccgcagtggacggaccagccga 360
>gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15I22 3', mRNA sequence
Length = 736
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 549 tgcttcctgacgcactgcgggtggaactcgacg 517
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 489 atggtggcgctgccgcagtggacggaccagccga 456
>gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I07 3', mRNA sequence
Length = 765
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 495 tgcttcctgacgcactgcgggtggaactcgacg 463
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 435 atggtggcgctgccgcagtggacggaccagccga 402
>gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13H06 5', mRNA sequence
Length = 811
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 416 tgcttcctgacgcactgcgggtggaactcgacg 448
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 476 atggtggcgctgccgcagtggacggaccagccga 509
>gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13H06 3', mRNA sequence
Length = 785
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 483 tgcttcctgacgcactgcgggtggaactcgacg 451
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 423 atggtggcgctgccgcagtggacggaccagccga 390
>gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A15 3', mRNA sequence
Length = 752
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 487 tgcttcctgacgcactgcgggtggaactcgacg 455
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 427 atggtggcgctgccgcagtggacggaccagccga 394
>gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15O18 3', mRNA sequence
Length = 771
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 494 tgcttcctgacgcactgcgggtggaactcgacg 462
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 434 atggtggcgctgccgcagtggacggaccagccga 401
>gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe14P10 3', mRNA sequence
Length = 745
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 486 tgcttcctgacgcactgcgggtggaactcgacg 454
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 426 atggtggcgctgccgcagtggacggaccagccga 393
>gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06G17 3', mRNA sequence
Length = 680
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 535 tgcttcctgacgcactgcgggtggaactcgacg 503
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 475 atggtggcgctgccgcagtggacggaccagccga 442
>gb|CF316226.1|CF316226 HD--05-H01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-H01, mRNA sequence
Length = 290
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 27 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 86
Query: 494 t 494
|
Sbjct: 87 t 87
>dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O03, full
insert sequence
Length = 1843
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 1164 tgcttcctgacgcactgcgggtggaactcgacg 1196
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 1224 atggtggcgctgccgcagtggacggaccagccga 1257
>ref|NT_107075.1| Oryza sativa (japonica cultivar-group)
Length = 389359
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 317602 tgcttcctgacgcactgcgggtggaactcgacg 317634
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 344590 tgcttcgtgacgcactgcgggtggaactcgacg 344622
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacga 212
|||||| |||||||||||||||||||||| ||||
Sbjct: 337798 tgcttcgtgacgcactgcgggtggaactcaacga 337831
Score = 46.1 bits (23), Expect = 0.021
Identities = 49/57 (85%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 333 tggtgaggaaggagg---tggagaggtgcataagggaggtgatgggcggggagagga 386
||||||||||||||| |||||||||| | ||||||||||||| ||||||||||
Sbjct: 337958 tggtgaggaaggaggagttggagaggtgtgtgagggaggtgatggaaggggagagga 338014
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 317662 atggtggcgctgccgcagtggacggaccagccga 317695
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccgacga 275
||||||||| || | |||||| |||||||||||||||
Sbjct: 344650 atggtggcggtggcgcagtggtcggaccagccgacga 344686
Score = 42.1 bits (21), Expect = 0.33
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||| ||||||||
Sbjct: 329989 tgcttcgtgacgcactgcggctggaactc 330017
>gb|AACV01008733.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008733, whole
genome shotgun sequence
Length = 18530
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 7803 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 7744
Query: 494 t 494
|
Sbjct: 7743 t 7743
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 17350 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 17291
Query: 491 tatt 494
||||
Sbjct: 17290 tatt 17287
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 11033 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 10983
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 17920 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 17861
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 17860 ggtccaatgagg 17849
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 15104 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 15049
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 14217 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 14158
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 14157 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 14118
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 17798 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 17748
>gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020390, whole
genome shotgun sequence
Length = 7387
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 4938 tgcttcctgacgcactgcgggtggaactcgacg 4970
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 4999 atggtggcgctgccgcagtggacggaccagccga 5032
>ref|NT_107203.1| Oryza sativa (japonica cultivar-group)
Length = 2359875
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 1810503 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 1810444
Query: 494 t 494
|
Sbjct: 1810443 t 1810443
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 1820051 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 1819992
Query: 491 tatt 494
||||
Sbjct: 1819991 tatt 1819988
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 1694391 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 1694332
Query: 491 tatt 494
||||
Sbjct: 1694331 tatt 1694328
Score = 58.0 bits (29), Expect = 5e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 1683751 gaggcaatgcatgaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 1683692
Query: 494 t 494
|
Sbjct: 1683691 t 1683691
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 1813733 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 1813683
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaac 73
||||||||||| || || ||| ||||||||||||| ||| | |||||| ||||||| | |
Sbjct: 1688819 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtcgagc 1688760
Query: 74 gaggc 78
|||||
Sbjct: 1688759 gaggc 1688755
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 1820621 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 1820562
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 1820561 ggtccaatgagg 1820550
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 1817805 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 1817750
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 1816918 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 1816859
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 1816858 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 1816819
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 1694961 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 1694902
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 1694901 ggtccaatgagg 1694890
Score = 48.1 bits (24), Expect = 0.005
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaacgagg 77
||||||| || || ||| |||| |||||||| ||| ||||||| |||||||||||||||
Sbjct: 1684536 tcggcaatggcctttgcaattcaggcaagccattcctttgggttgtgaggtccaacgagg 1684477
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 1820499 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 1820449
Score = 42.1 bits (21), Expect = 0.33
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 146 cagctcgaggtgctggcacacaaggccacaggt 178
||||| |||||||| || |||||||||||||||
Sbjct: 1694821 cagctggaggtgcttgctcacaaggccacaggt 1694789
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0217C03
Length = 58309
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 15206 tgcttcctgacgcactgcgggtggaactcgacg 15238
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 42194 tgcttcgtgacgcactgcgggtggaactcgacg 42226
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacga 212
|||||| |||||||||||||||||||||| ||||
Sbjct: 35402 tgcttcgtgacgcactgcgggtggaactcaacga 35435
Score = 46.1 bits (23), Expect = 0.021
Identities = 49/57 (85%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 333 tggtgaggaaggagg---tggagaggtgcataagggaggtgatgggcggggagagga 386
||||||||||||||| |||||||||| | ||||||||||||| ||||||||||
Sbjct: 35562 tggtgaggaaggaggagttggagaggtgtgtgagggaggtgatggaaggggagagga 35618
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 15266 atggtggcgctgccgcagtggacggaccagccga 15299
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccgacga 275
||||||||| || | |||||| |||||||||||||||
Sbjct: 42254 atggtggcggtggcgcagtggtcggaccagccgacga 42290
Score = 42.1 bits (21), Expect = 0.33
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||| ||||||||
Sbjct: 27593 tgcttcgtgacgcactgcggctggaactc 27621
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 9410526 tgcttcctgacgcactgcgggtggaactcgacg 9410558
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 9439641 tgcttcgtgacgcactgcgggtggaactcgacg 9439673
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacga 212
|||||| |||||||||||||||||||||| ||||
Sbjct: 9433130 tgcttcgtgacgcactgcgggtggaactcaacga 9433163
Score = 46.1 bits (23), Expect = 0.021
Identities = 49/57 (85%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 333 tggtgaggaaggagg---tggagaggtgcataagggaggtgatgggcggggagagga 386
||||||||||||||| |||||||||| | ||||||||||||| ||||||||||
Sbjct: 9433290 tggtgaggaaggaggagttggagaggtgtgtgagggaggtgatggaaggggagagga 9433346
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 7898633 tgacgcactgcgggtggaactcg 7898611
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 7880655 tgacgcactgcgggtggaactcg 7880633
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 9410587 atggtggcgctgccgcagtggacggaccagccga 9410620
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccgacga 275
||||||||| || | |||||| |||||||||||||||
Sbjct: 9439701 atggtggcggtggcgcagtggtcggaccagccgacga 9439737
Score = 42.1 bits (21), Expect = 0.33
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||| ||||||||
Sbjct: 9425320 tgcttcgtgacgcactgcggctggaactc 9425348
>gb|CH401185.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000022
genomic scaffold, whole genome shotgun sequence
Length = 1402826
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 306847 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 306788
Query: 494 t 494
|
Sbjct: 306787 t 306787
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 316394 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 316335
Query: 491 tatt 494
||||
Sbjct: 316334 tatt 316331
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 220225 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 220166
Query: 491 tatt 494
||||
Sbjct: 220165 tatt 220162
Score = 58.0 bits (29), Expect = 5e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 208628 gaggcaatgcatgaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 208569
Query: 494 t 494
|
Sbjct: 208568 t 208568
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 310077 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 310027
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaac 73
||||||||||| || || ||| ||||||||||||| ||| | |||||| ||||||| | |
Sbjct: 213696 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtcgagc 213637
Query: 74 gaggc 78
|||||
Sbjct: 213636 gaggc 213632
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 316964 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 316905
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 316904 ggtccaatgagg 316893
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 314148 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 314093
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 313261 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 313202
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 313201 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 313162
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 220847 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 220788
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 220787 ggtccaatgagg 220776
Score = 48.1 bits (24), Expect = 0.005
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaacgagg 77
||||||| || || ||| |||| |||||||| ||| ||||||| |||||||||||||||
Sbjct: 209413 tcggcaatggcctttgcaattcaggcaagccattcctttgggttgtgaggtccaacgagg 209354
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 316842 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 316792
Score = 42.1 bits (21), Expect = 0.33
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 146 cagctcgaggtgctggcacacaaggccacaggt 178
||||| |||||||| || |||||||||||||||
Sbjct: 220707 cagctggaggtgcttgctcacaaggccacaggt 220675
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 18884337 tgcttcctgacgcactgcgggtggaactcgacg 18884369
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 18913452 tgcttcgtgacgcactgcgggtggaactcgacg 18913484
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacga 212
|||||| |||||||||||||||||||||| ||||
Sbjct: 18906941 tgcttcgtgacgcactgcgggtggaactcaacga 18906974
Score = 46.1 bits (23), Expect = 0.021
Identities = 49/57 (85%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 333 tggtgaggaaggagg---tggagaggtgcataagggaggtgatgggcggggagagga 386
||||||||||||||| |||||||||| | ||||||||||||| ||||||||||
Sbjct: 18907101 tggtgaggaaggaggagttggagaggtgtgtgagggaggtgatggaaggggagagga 18907157
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 17372444 tgacgcactgcgggtggaactcg 17372422
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 17354466 tgacgcactgcgggtggaactcg 17354444
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 18884398 atggtggcgctgccgcagtggacggaccagccga 18884431
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccgacga 275
||||||||| || | |||||| |||||||||||||||
Sbjct: 18913512 atggtggcggtggcgcagtggtcggaccagccgacga 18913548
Score = 42.1 bits (21), Expect = 0.33
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||| ||||||||
Sbjct: 18899131 tgcttcgtgacgcactgcggctggaactc 18899159
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 4610746 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 4610687
Query: 494 t 494
|
Sbjct: 4610686 t 4610686
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 4620293 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 4620234
Query: 491 tatt 494
||||
Sbjct: 4620233 tatt 4620230
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 4524124 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 4524065
Query: 491 tatt 494
||||
Sbjct: 4524064 tatt 4524061
Score = 58.0 bits (29), Expect = 5e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 4512527 gaggcaatgcatgaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 4512468
Query: 494 t 494
|
Sbjct: 4512467 t 4512467
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 4613976 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 4613926
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 12713989 ttcctgacgcactccgggtggaactcgacg 12714018
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 12712493 ttcctgacgcactccgggtggaactcgacg 12712522
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 12654925 ttcctgacgcactccgggtggaactcgacg 12654954
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 11982042 ttcctgacgcactccgggtggaactcgacg 11982013
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgac 210
||||||||||||| |||||||||||||||
Sbjct: 12003239 ttcctgacgcactccgggtggaactcgac 12003211
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaac 73
||||||||||| || || ||| ||||||||||||| ||| | |||||| ||||||| | |
Sbjct: 4517595 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtcgagc 4517536
Query: 74 gaggc 78
|||||
Sbjct: 4517535 gaggc 4517531
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 4620863 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 4620804
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 4620803 ggtccaatgagg 4620792
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 4618047 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 4617992
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 4617160 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 4617101
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 4617100 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 4617061
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 4524746 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 4524687
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 4524686 ggtccaatgagg 4524675
Score = 48.1 bits (24), Expect = 0.005
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaacgagg 77
||||||| || || ||| |||| |||||||| ||| ||||||| |||||||||||||||
Sbjct: 4513312 tcggcaatggcctttgcaattcaggcaagccattcctttgggttgtgaggtccaacgagg 4513253
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 4620741 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 4620691
Score = 44.1 bits (22), Expect = 0.083
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactc 207
|||||||| |||||||||||||||||
Sbjct: 22248851 ttcctgacccactgcgggtggaactc 22248826
Score = 44.1 bits (22), Expect = 0.083
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||| ||||||||||||
Sbjct: 19571639 ttcctgacgcactccggctggaactcgacg 19571668
Score = 44.1 bits (22), Expect = 0.083
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| |||||||||||||||
Sbjct: 12642326 ttcctgacgcactctgggtggaactcgacg 12642355
Score = 44.1 bits (22), Expect = 0.083
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactc 207
||||||||||||||||| ||||||||
Sbjct: 9073253 ttcctgacgcactgcggctggaactc 9073228
Score = 42.1 bits (21), Expect = 0.33
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 146 cagctcgaggtgctggcacacaaggccacaggt 178
||||| |||||||| || |||||||||||||||
Sbjct: 4524606 cagctggaggtgcttgctcacaaggccacaggt 4524574
Score = 42.1 bits (21), Expect = 0.33
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 191 cactgcgggtggaactcgacg 211
|||||||||||||||||||||
Sbjct: 3423502 cactgcgggtggaactcgacg 3423482
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
complete sequence
Length = 166475
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 130844 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 130785
Query: 494 t 494
|
Sbjct: 130784 t 130784
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 140392 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 140333
Query: 491 tatt 494
||||
Sbjct: 140332 tatt 140329
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 14732 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 14673
Query: 491 tatt 494
||||
Sbjct: 14672 tatt 14669
Score = 58.0 bits (29), Expect = 5e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 4092 gaggcaatgcatgaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 4033
Query: 494 t 494
|
Sbjct: 4032 t 4032
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 134074 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 134024
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaac 73
||||||||||| || || ||| ||||||||||||| ||| | |||||| ||||||| | |
Sbjct: 9160 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtcgagc 9101
Query: 74 gaggc 78
|||||
Sbjct: 9100 gaggc 9096
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 140962 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 140903
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 140902 ggtccaatgagg 140891
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 138146 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 138091
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 137259 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 137200
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 137199 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 137160
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 15302 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 15243
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 15242 ggtccaatgagg 15231
Score = 48.1 bits (24), Expect = 0.005
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaacgagg 77
||||||| || || ||| |||| |||||||| ||| ||||||| |||||||||||||||
Sbjct: 4877 tcggcaatggcctttgcaattcaggcaagccattcctttgggttgtgaggtccaacgagg 4818
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 140840 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 140790
Score = 42.1 bits (21), Expect = 0.33
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 146 cagctcgaggtgctggcacacaaggccacaggt 178
||||| |||||||| || |||||||||||||||
Sbjct: 15162 cagctggaggtgcttgctcacaaggccacaggt 15130
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 65.9 bits (33), Expect = 2e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||||||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 7109653 gaggcaatgcaggaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 7109594
Query: 494 t 494
|
Sbjct: 7109593 t 7109593
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 7119201 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 7119142
Query: 491 tatt 494
||||
Sbjct: 7119141 tatt 7119138
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 6993541 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 6993482
Query: 491 tatt 494
||||
Sbjct: 6993481 tatt 6993478
Score = 58.0 bits (29), Expect = 5e-006
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 434 gaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaagtat 493
||||| ||||| ||||||||||| ||||||||||| ||||| ||||| || || ||||||
Sbjct: 6982901 gaggcaatgcatgaaggaggaaggtctgacaagaatattgctgaatttgctgcgaagtat 6982842
Query: 494 t 494
|
Sbjct: 6982841 t 6982841
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| ||||| ||||| |||||||| || |||||||||||||||
Sbjct: 7112883 attgttcccttttgtccccagctggaggtgcttgctcacaaggccacaggt 7112833
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 15163781 ttcctgacgcactccgggtggaactcgacg 15163752
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 15151164 ttcctgacgcactccgggtggaactcgacg 15151135
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 15031612 ttcctgacgcactccgggtggaactcgacg 15031641
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 14736721 ttcctgacgcactccgggtggaactcgacg 14736750
Score = 52.0 bits (26), Expect = 3e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||||||||||||||||
Sbjct: 14355330 ttcctgacgcactccgggtggaactcgacg 14355301
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgac 210
||||||||||||| |||||||||||||||
Sbjct: 15014058 ttcctgacgcactccgggtggaactcgac 15014086
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgac 210
||||||||||||| |||||||||||||||
Sbjct: 14364504 ttcctgacgcactccgggtggaactcgac 14364476
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaac 73
||||||||||| || || ||| ||||||||||||| ||| | |||||| ||||||| | |
Sbjct: 6987969 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtcgagc 6987910
Query: 74 gaggc 78
|||||
Sbjct: 6987909 gaggc 6987905
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 7119771 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 7119712
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 7119711 ggtccaatgagg 7119700
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 7116955 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 7116900
Score = 48.1 bits (24), Expect = 0.005
Identities = 81/100 (81%)
Strand = Plus / Minus
Query: 174 caggttgcttcctgacgcactgcgggtggaactcgacgattgaatccatcgctagtggtg 233
||||||| ||| ||||||| || || |||||||||||||| ||| | || |||| | |
Sbjct: 7116068 caggttgtttcttgacgcattgtggatggaactcgacgatggaagcaattgctacggcgg 7116009
Query: 234 ttccaatggtggcgatgccccagtgggcggaccagccgac 273
| |||||||| |||||||| |||| |||||||| |||||
Sbjct: 7116008 tgccaatggttgcgatgcctcagtcagcggaccaaccgac 7115969
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 6994111 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 6994052
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 6994051 ggtccaatgagg 6994040
Score = 48.1 bits (24), Expect = 0.005
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 18 tcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtccaacgagg 77
||||||| || || ||| |||| |||||||| ||| ||||||| |||||||||||||||
Sbjct: 6983686 tcggcaatggcctttgcaattcaggcaagccattcctttgggttgtgaggtccaacgagg 6983627
Score = 46.1 bits (23), Expect = 0.021
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggt 178
||||| ||||| || || ||||| |||||||| || |||||||||||||||
Sbjct: 7119649 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggt 7119599
Score = 44.1 bits (22), Expect = 0.083
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactc 207
|||||||| |||||||||||||||||
Sbjct: 25227241 ttcctgacccactgcgggtggaactc 25227216
Score = 44.1 bits (22), Expect = 0.083
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| ||| ||||||||||||
Sbjct: 22457433 ttcctgacgcactccggctggaactcgacg 22457462
Score = 44.1 bits (22), Expect = 0.083
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||| |||||||||||||||
Sbjct: 14724192 ttcctgacgcactctgggtggaactcgacg 14724221
Score = 44.1 bits (22), Expect = 0.083
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactc 207
||||||||||||||||| ||||||||
Sbjct: 11362382 ttcctgacgcactgcggctggaactc 11362357
Score = 42.1 bits (21), Expect = 0.33
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 146 cagctcgaggtgctggcacacaaggccacaggt 178
||||| |||||||| || |||||||||||||||
Sbjct: 6993971 cagctggaggtgcttgctcacaaggccacaggt 6993939
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 65.9 bits (33), Expect = 2e-008
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||||||||||||
Sbjct: 19908120 tgcttcctgacgcactgcgggtggaactcgacg 19908152
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 19935108 tgcttcgtgacgcactgcgggtggaactcgacg 19935140
Score = 52.0 bits (26), Expect = 3e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacga 212
|||||| |||||||||||||||||||||| ||||
Sbjct: 19928316 tgcttcgtgacgcactgcgggtggaactcaacga 19928349
Score = 46.1 bits (23), Expect = 0.021
Identities = 49/57 (85%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 333 tggtgaggaaggagg---tggagaggtgcataagggaggtgatgggcggggagagga 386
||||||||||||||| |||||||||| | ||||||||||||| ||||||||||
Sbjct: 19928476 tggtgaggaaggaggagttggagaggtgtgtgagggaggtgatggaaggggagagga 19928532
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 18488918 tgacgcactgcgggtggaactcg 18488896
Score = 44.1 bits (22), Expect = 0.083
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccga 272
||||||||| |||| |||||| ||||||||||||
Sbjct: 19908180 atggtggcgctgccgcagtggacggaccagccga 19908213
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 239 atggtggcgatgccccagtgggcggaccagccgacga 275
||||||||| || | |||||| |||||||||||||||
Sbjct: 19935168 atggtggcggtggcgcagtggtcggaccagccgacga 19935204
Score = 42.1 bits (21), Expect = 0.33
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||| ||||||||
Sbjct: 19920507 tgcttcgtgacgcactgcggctggaactc 19920535
>gb|CF314166.1|CF314166 HD--02-J11.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-J11, mRNA sequence
Length = 504
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 38 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 97
Query: 491 tatt 494
||||
Sbjct: 98 tatt 101
>gb|CF320817.1|CF320817 HD--11-N12.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-N12, mRNA sequence
Length = 422
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 38 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 97
Query: 491 tatt 494
||||
Sbjct: 98 tatt 101
>gb|AACV01008725.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008725,
whole genome shotgun sequence
Length = 1214
Score = 63.9 bits (32), Expect = 9e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaattcgcagccaag 490
|||||| | |||||||||||||| |||||||||||||| ||||| ||||| || || |||
Sbjct: 269 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatttgctgcgaag 328
Query: 491 tatt 494
||||
Sbjct: 329 tatt 332
>gb|BF889487.1|BF889487 EST056 Subtracted cDNA library of JA/BTH-treated rice leaf Oryza
sativa (japonica cultivar-group) cDNA clone JBI34, mRNA
sequence
Length = 294
Score = 61.9 bits (31), Expect = 4e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctg 187
||||| ||||| || || ||||| |||||||| || ||||||||||||||||| ||| ||
Sbjct: 109 attgttcccttttgcccccagctggaggtgcttgctcacaaggccacaggttgtttcttg 50
Query: 188 acgcactgcgggtggaactcgac 210
||||||| || | |||||||||
Sbjct: 49 tcgcactgtggatagaactcgac 27
>gb|CF317485.1|CF317485 HD--07-D05.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-D05, mRNA sequence
Length = 554
Score = 61.9 bits (31), Expect = 4e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 128 attgtccccttctgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctg 187
||||| ||||| || || ||||| ||| |||| || ||||||||||||||||| ||| ||
Sbjct: 289 attgttcccttttgcccccagctggagatgcttgctcacaaggccacaggttgtttcttg 348
Query: 188 acgcactgcgggtggaactcgac 210
||||||| || |||||||||||
Sbjct: 349 tcgcactgtggatggaactcgac 371
Score = 48.1 bits (24), Expect = 0.005
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 6 agctggacgagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctga 65
||||||| ||||||||||| || || ||| | ||||||||||| ||| ||||||| | |
Sbjct: 167 agctggaggagctcggcaatggcctttgcaactccggcaagccattcctttgggttgtca 226
Query: 66 ggtccaacgagg 77
||||||| ||||
Sbjct: 227 ggtccaatgagg 238
>dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C08, full
insert sequence
Length = 1583
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 1077 ggttgcttcgtgacgcactgcgggtggaactcgac 1111
>gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002128, whole
genome shotgun sequence
Length = 69109
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 40122 ggttgcttcgtgacgcactgcgggtggaactcgac 40088
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 35638 tgcttcgtgacgcactgcgggtggaactc 35610
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 28378261 ggttgcttcgtgacgcactgcgggtggaactcgac 28378295
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 4150317 tgcttcgtgacgcactgcgggtggaactcgacg 4150285
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 30764265 tgacgcactgcgggtggaactcgacg 30764240
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 25673577 tgacgcactgcgggtggaactcgacg 25673602
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 23532103 tgacgcactgcgggtggaactcgacg 23532128
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcg 208
||||| |||||||||||||||||||||||
Sbjct: 28922487 gcttcgtgacgcactgcgggtggaactcg 28922459
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 28382740 tgcttcgtgacgcactgcgggtggaactc 28382768
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgac 210
|||||||||||||||||||||||||
Sbjct: 3916734 tgacgcactgcgggtggaactcgac 3916758
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 30786603 acgcactgcgggtggaactcgacg 30786580
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 23539648 acgcactgcgggtggaactcgacg 23539671
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 37756893 tgacgcactgcgggtggaactcg 37756871
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 30769493 tgacgcactgcgggtggaactcg 30769471
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 30730441 tgacgcactgcgggtggaactcg 30730463
Score = 46.1 bits (23), Expect = 0.021
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacgattga 216
||||||| |||||||||||||||||| ||||
Sbjct: 30722644 tgacgcattgcgggtggaactcgacgcttga 30722674
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24815104 cgcactgcgggtggaactcgacg 24815126
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24787335 cgcactgcgggtggaactcgacg 24787313
>ref|NM_192093.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1341
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 1102 ggttgcttcgtgacgcactgcgggtggaactcgac 1136
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 2825644 ggttgcttcgtgacgcactgcgggtggaactcgac 2825678
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 5211648 tgacgcactgcgggtggaactcgacg 5211623
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 120960 tgacgcactgcgggtggaactcgacg 120985
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcg 208
||||| |||||||||||||||||||||||
Sbjct: 3369870 gcttcgtgacgcactgcgggtggaactcg 3369842
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 2830123 tgcttcgtgacgcactgcgggtggaactc 2830151
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 5233986 acgcactgcgggtggaactcgacg 5233963
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 12204276 tgacgcactgcgggtggaactcg 12204254
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 5216876 tgacgcactgcgggtggaactcg 5216854
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 5177824 tgacgcactgcgggtggaactcg 5177846
Score = 46.1 bits (23), Expect = 0.021
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacgattga 216
||||||| |||||||||||||||||| ||||
Sbjct: 5170027 tgacgcattgcgggtggaactcgacgcttga 5170057
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0519D04
Length = 193068
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 12691 ggttgcttcgtgacgcactgcgggtggaactcgac 12725
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 17170 tgcttcgtgacgcactgcgggtggaactc 17198
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0478H03
Length = 167560
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 132098 ggttgcttcgtgacgcactgcgggtggaactcgac 132132
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 136577 tgcttcgtgacgcactgcgggtggaactc 136605
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 2758709 ggttgcttcgtgacgcactgcgggtggaactcgac 2758743
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 5124061 tgacgcactgcgggtggaactcgacg 5124036
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 140637 tgacgcactgcgggtggaactcgacg 140662
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcg 208
||||| |||||||||||||||||||||||
Sbjct: 3301711 gcttcgtgacgcactgcgggtggaactcg 3301683
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 2763193 tgcttcgtgacgcactgcgggtggaactc 2763221
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 5129735 acgcactgcgggtggaactcgacg 5129712
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 11934087 tgacgcactgcgggtggaactcg 11934065
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 5090852 tgacgcactgcgggtggaactcg 5090874
Score = 46.1 bits (23), Expect = 0.021
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacgattga 216
||||||| |||||||||||||||||| ||||
Sbjct: 5082216 tgacgcattgcgggtggaactcgacgcttga 5082246
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 27960430 ggttgcttcgtgacgcactgcgggtggaactcgac 27960464
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 4190040 tgcttcgtgacgcactgcgggtggaactcgacg 4190008
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 30325782 tgacgcactgcgggtggaactcgacg 30325757
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 25342358 tgacgcactgcgggtggaactcgacg 25342383
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 23011645 tgacgcactgcgggtggaactcgacg 23011670
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcg 208
||||| |||||||||||||||||||||||
Sbjct: 28503432 gcttcgtgacgcactgcgggtggaactcg 28503404
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 27964914 tgcttcgtgacgcactgcgggtggaactc 27964942
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgac 210
|||||||||||||||||||||||||
Sbjct: 3954308 tgacgcactgcgggtggaactcgac 3954332
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 30331456 acgcactgcgggtggaactcgacg 30331433
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 23021036 acgcactgcgggtggaactcgacg 23021059
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 37135808 tgacgcactgcgggtggaactcg 37135786
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 30292573 tgacgcactgcgggtggaactcg 30292595
Score = 46.1 bits (23), Expect = 0.021
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacgattga 216
||||||| |||||||||||||||||| ||||
Sbjct: 30283937 tgacgcattgcgggtggaactcgacgcttga 30283967
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24348384 cgcactgcgggtggaactcgacg 24348406
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24320276 cgcactgcgggtggaactcgacg 24320254
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 61.9 bits (31), Expect = 4e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 176 ggttgcttcctgacgcactgcgggtggaactcgac 210
||||||||| |||||||||||||||||||||||||
Sbjct: 28297591 ggttgcttcgtgacgcactgcgggtggaactcgac 28297625
Score = 58.0 bits (29), Expect = 5e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 179 tgcttcctgacgcactgcgggtggaactcgacg 211
|||||| ||||||||||||||||||||||||||
Sbjct: 4152515 tgcttcgtgacgcactgcgggtggaactcgacg 4152483
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 30683595 tgacgcactgcgggtggaactcgacg 30683570
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 25593357 tgacgcactgcgggtggaactcgacg 25593382
Score = 52.0 bits (26), Expect = 3e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||
Sbjct: 23453386 tgacgcactgcgggtggaactcgacg 23453411
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 180 gcttcctgacgcactgcgggtggaactcg 208
||||| |||||||||||||||||||||||
Sbjct: 28841817 gcttcgtgacgcactgcgggtggaactcg 28841789
Score = 50.1 bits (25), Expect = 0.001
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 179 tgcttcctgacgcactgcgggtggaactc 207
|||||| ||||||||||||||||||||||
Sbjct: 28302070 tgcttcgtgacgcactgcgggtggaactc 28302098
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgac 210
|||||||||||||||||||||||||
Sbjct: 3918932 tgacgcactgcgggtggaactcgac 3918956
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 30705933 acgcactgcgggtggaactcgacg 30705910
Score = 48.1 bits (24), Expect = 0.005
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 188 acgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||
Sbjct: 23460931 acgcactgcgggtggaactcgacg 23460954
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 37676223 tgacgcactgcgggtggaactcg 37676201
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 30688823 tgacgcactgcgggtggaactcg 30688801
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcg 208
|||||||||||||||||||||||
Sbjct: 30649771 tgacgcactgcgggtggaactcg 30649793
Score = 46.1 bits (23), Expect = 0.021
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 186 tgacgcactgcgggtggaactcgacgattga 216
||||||| |||||||||||||||||| ||||
Sbjct: 30641974 tgacgcattgcgggtggaactcgacgcttga 30642004
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24736387 cgcactgcgggtggaactcgacg 24736409
Score = 46.1 bits (23), Expect = 0.021
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 189 cgcactgcgggtggaactcgacg 211
|||||||||||||||||||||||
Sbjct: 24708618 cgcactgcgggtggaactcgacg 24708596
>gb|AQ861812.1|AQ861812 nbeb0017J05r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0017J05r, DNA sequence
Length = 523
Score = 60.0 bits (30), Expect = 1e-006
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 364 ttcctgacgcactgcgggtggaactcgacg 335
>gb|AQ913482.1|AQ913482 nbeb0041B12r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0041B12r, DNA sequence
Length = 531
Score = 60.0 bits (30), Expect = 1e-006
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 369 ttcctgacgcactgcgggtggaactcgacg 340
>gb|AZ130075.1|AZ130075 OSJNBb0102P10r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0102P10r, DNA
sequence
Length = 1042
Score = 60.0 bits (30), Expect = 1e-006
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 300 ttcctgacgcactgcgggtggaactcgacg 271
>gb|C28980.1|C28980 C28980 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C63031_1A, mRNA sequence
Length = 405
Score = 60.0 bits (30), Expect = 1e-006
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 431 aaggaggccatgcaggaaggaggaagctctgacaagaacattgcagaatt 480
|||||| | |||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 207 aaggagtcaatgcaggaaggagggagctctgacaagaatattgctgaatt 256
>dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D08, full
insert sequence
Length = 1662
Score = 60.0 bits (30), Expect = 1e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 1183 ttcctgacgcactgcgggtggaactcgacg 1212
>dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E02, full
insert sequence
Length = 2591
Score = 60.0 bits (30), Expect = 1e-006
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 182 ttcctgacgcactgcgggtggaactcgacg 211
||||||||||||||||||||||||||||||
Sbjct: 1180 ttcctgacgcactgcgggtggaactcgacg 1209
>dbj|AK110892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-A01, full
insert sequence
Length = 1521
Score = 60.0 bits (30), Expect = 1e-006
Identities = 108/134 (80%)
Strand = Plus / Plus
Query: 140 tgtcctcagctcgaggtgctggcacacaaggccacaggttgcttcctgacgcactgcggg 199
||||| ||||| ||||| ||| ||| ||||| |||||||| ||| ||||||| || ||
Sbjct: 1049 tgtccccagcttgaggtcctgaaacataaggcaacaggttgtttcttgacgcattgtgga 1108
Query: 200 tggaactcgacgattgaatccatcgctagtggtgttccaatggtggcgatgccccagtgg 259
|||||||||||||| ||| | || |||| | || |||||||| |||||||| ||||
Sbjct: 1109 tggaactcgacgatggaagcaattgctacggcggtgccaatggttgcgatgcctcagtca 1168
Query: 260 gcggaccagccgac 273
|||||||| |||||
Sbjct: 1169 gcggaccaaccgac 1182
Score = 48.1 bits (24), Expect = 0.005
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 14 gagctcggcaacggactgtgcgattccggcaagcctttcgtttgggtgctgaggtc 69
||||||||||| || || ||| ||||||||||||| ||| | |||||| |||||||
Sbjct: 923 gagctcggcaatggcctctgcaattccggcaagccattcctctgggtggtgaggtc 978
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 776,186
Number of Sequences: 438736
Number of extensions: 776186
Number of successful extensions: 17014
Number of sequences better than 0.5: 487
Number of HSP's better than 0.5 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12220
Number of HSP's gapped (non-prelim): 4776
length of query: 581
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 560
effective length of database: 2,791,206,460
effective search space: 1563075617600
effective search space used: 1563075617600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)