BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943843.2.1
(2639 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA... 1031 0.0
ref|XM_470566.1| Oryza sativa (japonica cultivar-group), p... 1031 0.0
dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA... 1023 0.0
dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA... 638 e-180
gb|AY224517.1| Oryza sativa (japonica cultivar-group) isola... 638 e-180
gb|CB658275.1|CB658275 OSJNEc14D04.f OSJNEc Oryza sativa (j... 523 e-145
gb|CB649657.1|CB649657 OSJNEb13L15.r OSJNEb Oryza sativa (j... 502 e-139
ref|NM_196278.1| Oryza sativa (japonica cultivar-group) put... 488 e-135
gb|CB677383.1|CB677383 OSJNEe14E08.f OSJNEe Oryza sativa (j... 484 e-133
gb|CB649656.1|CB649656 OSJNEb13L15.f OSJNEb Oryza sativa (j... 468 e-129
gb|CF326044.1|CF326044 JMT1--04-P08.g1 AtJMT-overexpressing... 371 1e-099
gb|C99705.1|C99705 C99705 Rice panicle (longer than 10cm) O... 351 1e-093
gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, N... 335 7e-089
gb|AACV01005997.1| Oryza sativa (japonica cultivar-group) c... 335 7e-089
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 335 7e-089
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 335 7e-089
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 335 7e-089
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 335 7e-089
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 335 7e-089
gb|C22508.1|C22508 C22508 Rice panicle at flowering stage O... 295 6e-077
gb|C22572.1|C22572 C22572 Rice panicle (between 3cm to 10cm... 272 9e-070
gb|CV722438.1|CV722438 YTPSP--01-D18.b1 TPSP-overexpression... 260 3e-066
gb|AQ050945.1|AQ050945 nbxb0004dC04r CUGI Rice BAC Library ... 220 3e-054
gb|C73929.1|C73929 C73929 Rice panicle (longer than 10cm) O... 212 7e-052
gb|AU064258.2|AU064258 AU064258 Rice panicle (longer than 1... 208 1e-050
gb|AU095237.1|AU095237 AU095237 Rice cDNA from immature lea... 188 1e-044
gb|AU091393.1|AU091393 AU091393 Rice immature leaf includin... 186 4e-044
gb|AACV01021458.1| Oryza sativa (japonica cultivar-group) c... 180 3e-042
ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chr... 180 3e-042
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 180 3e-042
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 180 3e-042
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 180 3e-042
gb|AC079936.7| Oryza sativa (japonica cultivar-group) chrom... 180 3e-042
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 180 3e-042
gb|AU029970.1|AU029970 AU029970 Rice cDNA from immature lea... 174 2e-040
gb|CB636014.1|CB636014 OSJNEa01A12.f OSJNEa Oryza sativa (j... 143 6e-031
gb|AZ132617.1|AZ132617 OSJNBb0107O14r CUGI Rice BAC Library... 141 2e-030
gb|C22550.1|C22550 C22550 Rice panicle (longer than 10cm) O... 133 5e-028
gb|C22551.1|C22551 C22551 Rice panicle (longer than 10cm) O... 133 5e-028
gb|D39183.1|D39183 RICR2893A Rice root Oryza sativa (japoni... 131 2e-027
gb|AU065234.2|AU065234 AU065234 Rice cDNA from immature lea... 119 8e-024
gb|CB640622.1|CB640622 OSJNEa15K08.f OSJNEa Oryza sativa (j... 111 2e-021
gb|AQ257069.1|AQ257069 nbxb0017O24f CUGI Rice BAC Library O... 109 8e-021
gb|AQ290180.1|AQ290180 nbxb0036O14r CUGI Rice BAC Library O... 109 8e-021
gb|C22573.1|C22573 C22573 Rice panicle (between 3cm to 10cm... 109 8e-021
gb|AACV01005994.1| Oryza sativa (japonica cultivar-group) c... 96 1e-016
dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA... 88 3e-014
dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA... 88 3e-014
ref|NM_189831.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-014
dbj|AB157387.1| Oryza sativa (japonica cultivar-group) DNA,... 82 2e-012
dbj|AP004309.3| Oryza sativa (japonica cultivar-group) geno... 82 2e-012
dbj|AP004308.3| Oryza sativa (japonica cultivar-group) geno... 82 2e-012
dbj|AP004988.3| Oryza sativa (japonica cultivar-group) geno... 82 2e-012
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 82 2e-012
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 82 2e-012
gb|AQ330821.1|AQ330821 nbxb0048A04f CUGI Rice BAC Library O... 68 3e-008
dbj|AK111551.1| Oryza sativa (japonica cultivar-group) cDNA... 64 4e-007
dbj|AK111710.1| Oryza sativa (japonica cultivar-group) cDNA... 62 2e-006
ref|XM_464408.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-006
gb|CB649720.1|CB649720 OSJNEb13N02.f OSJNEb Oryza sativa (j... 60 6e-006
dbj|AP003932.3| Oryza sativa (japonica cultivar-group) geno... 60 6e-006
dbj|AP003705.3| Oryza sativa (japonica cultivar-group) geno... 60 6e-006
gb|AACV01016592.1| Oryza sativa (japonica cultivar-group) c... 60 6e-006
ref|NM_186340.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-006
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 60 6e-006
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 60 6e-006
gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) c... 58 3e-005
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 58 3e-005
ref|NM_191078.1| Oryza sativa (japonica cultivar-group), p... 58 3e-005
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 58 3e-005
dbj|AP003411.4| Oryza sativa (japonica cultivar-group) geno... 58 3e-005
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 58 3e-005
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 58 3e-005
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 58 3e-005
gb|C22511.1|C22511 C22511 Rice panicle at flowering stage O... 56 1e-004
gb|C73758.1|C73758 C73758 Rice panicle (longer than 10cm) O... 56 1e-004
gb|CF309622.1|CF309622 ABF--03-N24.g1 ABF3-overexpressing t... 56 1e-004
dbj|AK111635.1| Oryza sativa (japonica cultivar-group) cDNA... 56 1e-004
dbj|AK111995.1| Oryza sativa (japonica cultivar-group) cDNA... 56 1e-004
ref|XM_470876.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-004
gb|AQ365302.2|AQ365302 nbxb0063H01r CUGI Rice BAC Library O... 54 4e-004
gb|AU095720.1|AU095720 AU095720 Rice green shoot Oryza sati... 52 0.002
dbj|AP003982.1| Oryza sativa (japonica cultivar-group) chro... 52 0.002
dbj|AK067054.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.002
dbj|AK119572.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.002
dbj|AP004570.5| Oryza sativa (japonica cultivar-group) geno... 52 0.002
dbj|AP004253.3| Oryza sativa (japonica cultivar-group) geno... 52 0.002
dbj|AP003934.4| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|AACV01000859.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
gb|AACV01003529.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
gb|AACV01016985.1| Oryza sativa (japonica cultivar-group) c... 52 0.002
ref|NM_183688.1| Oryza sativa (japonica cultivar-group), p... 52 0.002
ref|XM_479443.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 52 0.002
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 52 0.002
dbj|AP005849.3| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.002
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.002
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.002
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 0.002
gb|AQ291213.1|AQ291213 nbxb0038D17f CUGI Rice BAC Library O... 50 0.006
gb|D39301.1|D39301 RICR3293A Rice root Oryza sativa (japoni... 50 0.006
gb|AU032343.1|AU032343 AU032343 Rice root Oryza sativa (jap... 50 0.006
gb|CF294211.1|CF294211 30DGS--03-K14.b1 Rice leaf plasmid c... 50 0.006
gb|CF294212.1|CF294212 30DGS--03-K14.g1 Rice leaf plasmid c... 50 0.006
dbj|AK111541.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.006
dbj|AP005555.3| Oryza sativa (japonica cultivar-group) geno... 50 0.006
gb|AACV01020214.1| Oryza sativa (japonica cultivar-group) c... 50 0.006
gb|AACV01020215.1| Oryza sativa (japonica cultivar-group) c... 50 0.006
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 50 0.006
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.006
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.006
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 50 0.006
gb|AU032199.1|AU032199 AU032199 Rice root Oryza sativa (jap... 48 0.025
gb|CA755558.1|CA755558 BR030023000_PLATE_E10_77_082.ab1 OA ... 48 0.025
gb|CB641896.1|CB641896 OSJNEb01M15.r OSJNEb Oryza sativa (j... 48 0.025
gb|CB669235.1|CB669235 OSJNEe01J08.r OSJNEe Oryza sativa (j... 48 0.025
gb|CB670762.1|CB670762 OSJNEe04A04.r OSJNEe Oryza sativa (j... 48 0.025
dbj|AP004099.1| Oryza sativa (japonica cultivar-group) chro... 48 0.025
gb|AY224476.1| Oryza sativa (japonica cultivar-group) isola... 48 0.025
dbj|AK058504.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.025
dbj|AK066258.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.025
dbj|AK102267.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.025
dbj|AK104870.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.025
dbj|AK121860.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.025
emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC O... 48 0.025
dbj|AP003992.2| Oryza sativa (japonica cultivar-group) geno... 48 0.025
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 48 0.025
gb|AC150775.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|AC087552.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|AC136969.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
dbj|AP007224.2| Oryza sativa (japonica cultivar-group) geno... 48 0.025
gb|AACV01003374.1| Oryza sativa (japonica cultivar-group) c... 48 0.025
gb|AACV01003457.1| Oryza sativa (japonica cultivar-group) c... 48 0.025
gb|AACV01010836.1| Oryza sativa (japonica cultivar-group) c... 48 0.025
gb|AACV01022262.1| Oryza sativa (japonica cultivar-group) c... 48 0.025
gb|AACV01023877.1| Oryza sativa (japonica cultivar-group) c... 48 0.025
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 48 0.025
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 48 0.025
gb|AC093490.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 48 0.025
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 48 0.025
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 48 0.025
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.025
gb|AQ579252.1|AQ579252 nbxb0084G09f CUGI Rice BAC Library O... 46 0.098
gb|AQ574686.1|AQ574686 nbxb0085N14f CUGI Rice BAC Library O... 46 0.098
gb|C22423.1|C22423 C22423 Rice callus cDNA Oryza sativa (ja... 46 0.098
gb|C73759.1|C73759 C73759 Rice panicle (longer than 10cm) O... 46 0.098
gb|CF331589.1|CF331589 NACL--07-M11.b1 Rice callus plasmid ... 46 0.098
dbj|AP004175.2| Oryza sativa (japonica cultivar-group) chro... 46 0.098
gb|AC120530.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|AC118287.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
dbj|AK060377.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.098
dbj|AK067631.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.098
dbj|AK069324.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.098
dbj|AK073005.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.098
dbj|AK101160.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.098
dbj|AP007203.2| Oryza sativa (japonica cultivar-group) geno... 46 0.098
dbj|AP004868.3| Oryza sativa (japonica cultivar-group) geno... 46 0.098
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 46 0.098
ref|NT_107231.1| Oryza sativa (japonica cultivar-group) 46 0.098
dbj|AP003713.3| Oryza sativa (japonica cultivar-group) geno... 46 0.098
gb|AACV01002785.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01005038.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01006820.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01006821.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01009533.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01014332.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01022444.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
gb|AACV01022704.1| Oryza sativa (japonica cultivar-group) c... 46 0.098
ref|NM_190136.1| Oryza sativa (japonica cultivar-group), p... 46 0.098
ref|XM_467068.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.098
ref|XM_472156.1| Oryza sativa (japonica cultivar-group), p... 46 0.098
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 46 0.098
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 46 0.098
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 46 0.098
dbj|AP003227.3| Oryza sativa (japonica cultivar-group) geno... 46 0.098
dbj|AP003261.3| Oryza sativa (japonica cultivar-group) geno... 46 0.098
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
emb|AL663016.5|OSJN00216 Oryza sativa genomic DNA, chromoso... 46 0.098
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.098
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.098
gb|AC091787.6| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|AC123897.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|AC128643.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|AC146948.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.098
gb|AQ256761.1|AQ256761 nbxb0016H08f CUGI Rice BAC Library O... 44 0.39
gb|AQ914260.1|AQ914260 nbeb0048C09f CUGI Rice BAC Library (... 44 0.39
gb|AQ916632.1|AQ916632 nbeb0066L04r CUGI Rice BAC Library (... 44 0.39
gb|AQ365641.2|AQ365641 nbxb0064O03r CUGI Rice BAC Library O... 44 0.39
dbj|AG210347.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.39
gb|D22444.2|D22444 RICC11129A Rice callus Oryza sativa (jap... 44 0.39
gb|AU166842.1|AU166842 AU166842 Rice callus (2001) Oryza sa... 44 0.39
gb|CB636508.1|CB636508 OSJNEa02B13.r OSJNEa Oryza sativa (j... 44 0.39
gb|CB643013.1|CB643013 OSJNEb03H18.r OSJNEb Oryza sativa (j... 44 0.39
gb|CB645914.1|CB645914 OSJNEb07P21.r OSJNEb Oryza sativa (j... 44 0.39
gb|CB652843.1|CB652843 OSJNEc03E10.r OSJNEc Oryza sativa (j... 44 0.39
gb|CB654210.1|CB654210 OSJNEc06B04.f OSJNEc Oryza sativa (j... 44 0.39
gb|CB667713.1|CB667713 OSJNEd15C20.r OSJNEd Oryza sativa (j... 44 0.39
gb|CB668433.1|CB668433 OSJNEd16E16.f OSJNEd Oryza sativa (j... 44 0.39
gb|CB670360.1|CB670360 OSJNEe03G07.r OSJNEe Oryza sativa (j... 44 0.39
gb|CB670672.1|CB670672 OSJNEe03N22.r OSJNEe Oryza sativa (j... 44 0.39
dbj|AP005005.1| Oryza sativa (japonica cultivar-group) chro... 44 0.39
dbj|AK063386.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.39
dbj|AK064374.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.39
dbj|AK070816.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.39
dbj|AK100387.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.39
dbj|AK111909.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.39
dbj|AP005685.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
dbj|AP005400.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 44 0.39
dbj|AP005769.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
gb|AACV01000864.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01002042.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01003191.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01010424.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01014735.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01019715.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
gb|AACV01019733.1| Oryza sativa (japonica cultivar-group) c... 44 0.39
ref|NM_183691.1| Oryza sativa (japonica cultivar-group), p... 44 0.39
ref|NM_192476.1| Oryza sativa (japonica cultivar-group), p... 44 0.39
ref|XM_462688.1| Oryza sativa (japonica cultivar-group), p... 44 0.39
ref|XM_463832.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
ref|XM_470559.1| Oryza sativa (japonica cultivar-group), p... 44 0.39
ref|XM_473743.1| Oryza sativa (japonica cultivar-group), p... 44 0.39
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 44 0.39
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 44 0.39
ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BA... 44 0.39
dbj|AP003291.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
dbj|AP004364.4| Oryza sativa (japonica cultivar-group) geno... 44 0.39
dbj|AP004752.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
dbj|AP005313.3| Oryza sativa (japonica cultivar-group) geno... 44 0.39
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 44 0.39
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.39
emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromoso... 44 0.39
>dbj|AK100621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F23, full
insert sequence
Length = 2637
Score = 1031 bits (520), Expect = 0.0
Identities = 826/928 (89%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2349 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 2290
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2289 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 2230
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcg 582
|| || || ||||| ||||| ||||| || || ||||| |||||||| || |||||||||
Sbjct: 2229 agcacgtcggcaaaccgggagagagacttggcagggtacagacccttcagcgcaggatcg 2170
Query: 583 accatcctgtccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaagtgac 642
||||| ||||||||||| ||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 2169 accattctgtccaatgcatcgatgtcatggagctgtggagtcgcccaccgcacaagtgac 2110
Query: 643 tgttctgacctgggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatg 702
|| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || ||||||
Sbjct: 2109 tgctctgacctcggtctagtgctatcgaaaggtctgcgtcccgtcaaaagctctagcatg 2050
Query: 703 acaactccaaagctgtaaacatcactcttgaaggtgtactgaccggtcatgtccacttct 762
|| |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||| |||
Sbjct: 2049 actactccaaagctgtagacatcgctcttcagtgtgtactgaccagtcatgtccacctct 1990
Query: 763 ggggcagtgtatccggcactttgttctgctgcctggaattcagcaccaggaataaagctt 822
||||||||| | || ||||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 1989 ggggcagtgcacccagcactctgttgcgctgcctggaattctgcatcagaaataaagctt 1930
Query: 823 gcaagtccagcatctgaaaggtgtggattgaattctgagtccagcaaaatatttgacgac 882
|||||||||||||||||||||||||||||||||||||| ||||| | || || || |||
Sbjct: 1929 gcaagtccagcatctgaaaggtgtggattgaattctgaatccagtagaaggttggatgac 1870
Query: 883 ttgaaattcttatggatgatggatggagaacatatttcatgaaggtactccagtgcacgg 942
|||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 1869 ttgaaattcttatggatgatggatggagaacaaatttcatgaagatattccagtgcacgg 1810
Query: 943 gcagagccgagtgcgatcttgatacgagagttccagctaagtggcttgctgtactcatct 1002
|||||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||
Sbjct: 1809 gcagagcctagtgcgatcttgacacgagagttccagctaagtggcttgctgtattcgtct 1750
Query: 1003 gaaaggtggagtagatcatgaagcgatccattcctgtggaaatcatacacaagcaagtgc 1062
||||| |||||||||||||| || || ||||||||||||||||| || |||||||||||
Sbjct: 1749 gaaagatggagtagatcatggagtgacccattcctgtggaaatcgtaaacaagcaagtgt 1690
Query: 1063 tggccatgttccatgcaatagcctacaagctcattcagattcggatggtgcaattttgaa 1122
|| |||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||
Sbjct: 1689 tgcccatgttccatgcaatagcccacaagctcattgagattcggatgatgcagttttgaa 1630
Query: 1123 atgttcgagaccagttcagcaaagtcatcagatgattgaaatggcatcacagtactatct 1182
|||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 1629 atgtctgagaccagttcagcaaaatcatcagatgaatggaatggcatcacggtactatca 1570
Query: 1183 aatttcttgatcgccagaacctttccatcattgaattgtgccctgtaaacacgtccaaaa 1242
| |||||| | ||||||||||||||| || | || ||||||||||| ||||||||||||
Sbjct: 1569 agtttcttcacggccagaacctttccaccagtaaactgtgccctgtatacacgtccaaaa 1510
Query: 1243 gtaccctctccaacaaggttgtcgaagctaaagctatctgttgccatctgtagatctgca 1302
||||| || |||||||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 1509 gtaccttccccaacaaggttgtccatgctaaagctttctgttgccatctgtagatctgca 1450
Query: 1303 actgaataaacagttgccttcataggtg 1330
|||||||||||||||||||| |||||||
Sbjct: 1449 actgaataaacagttgcctttataggtg 1422
Score = 672 bits (339), Expect = 0.0
Identities = 884/1065 (83%), Gaps = 3/1065 (0%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 1384 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 1325
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 1324 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 1265
Query: 1491 gttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccat 1550
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 1264 tttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaa 1205
Query: 1551 aacagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccag 1610
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| |||||
Sbjct: 1204 tgccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccag 1145
Query: 1611 caacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaact 1670
||| ||||| || || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1144 caatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaact 1085
Query: 1671 tgatgaaccatcatcattctgacccgcgccattccaatggtttggaggaggaggcgctgt 1730
| |||||| ||| || ||||| | || || | ||||||| ||||| || ||||
Sbjct: 1084 t---gaaccaccattgttttgacctgggctgtttggacggtttggtggaggtggagctga 1028
Query: 1731 atatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcggtctgtagatt 1790
||| || || || ||||| |||||||| | ||||||||||||||||| || ||||||||
Sbjct: 1027 atacggtggaggtggtggtgctggtccattactccaagaatttccgtcagtttgtagatt 968
Query: 1791 gtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacattcag 1850
||||||||||||||| ||||| |||||||| ||||||||||| |||||| ||||||||||
Sbjct: 967 gtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgcaacattcag 908
Query: 1851 ggtttcaaggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaa 1910
|||||||| || || || | |||||||||||||||||||||||| ||||||||||
Sbjct: 907 atcatcaagggggagattagcaaggacattgatataaccagtaaattgattgttctgcag 848
Query: 1911 atacattcttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagaga 1970
||| | | | ||||||||||||||| ||||| | ||||||||| ||||||| ||||||
Sbjct: 847 atataatttcttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagaga 788
Query: 1971 attaaaggagagatccagctctgacaaactataaaggttggaaaatacatcagtgatgtt 2030
||||||||| |||||||| || ||| ||||| ||| |||||||||||||||| || ||
Sbjct: 787 attaaaggaaagatccagtgttgtcaagctatagaggctggaaaatacatcagttatatt 728
Query: 2031 tccttgtagttggttatgattaaggtttaaatacttaagattaggcatcgtcgaaattga 2090
|||||| | |||||||||||| || ||||||||||||||||||| ||||| |||| ||
Sbjct: 727 tccttgcaattggttatgatttagatttaaatacttaagattagacatcgagaaaatcga 668
Query: 2091 gtagggtaaatttccaccaaattgatttcctgcaagattgagtttctcaagcttcatatt 2150
|||||||||||||||| || || |||||||| |||||||| |||||||||| || |
Sbjct: 667 gtagggtaaatttccagtgaactggtttcctgcgagattgagcctctcaagcttattagt 608
Query: 2151 gggaagattgtactgtatttgacctccaccgccaaggttattttggctcatgtcaagctc 2210
|||||||||||||||||| || ||||| |||||||| ||||||||||| || | |||
Sbjct: 607 gggaagattgtactgtatctgttggccaccaccaaggttgttttggctcatatcgatctc 548
Query: 2211 aactaatgaacccaagttattcatgttgtaggccaaatttccagtgagtgacaagtttgg 2270
|| |||||||||| | ||||||| ||||| |||||||| || | ||| |||| ||||
Sbjct: 547 aatcaatgaacccatggtattcatattgtacgccaaattaccggagagccccaagcttgg 488
Query: 2271 taattggattttagtgacccctgatcctgagcaagtaatgcccttccatgactggccaca 2330
||||| |||| ||| || |||||||||||| || || |||| |||||| ||||||||
Sbjct: 487 taatttgattgcagtaactgatgatcctgagcacgtgataccctgccatgattggccaca 428
Query: 2331 aggatcacccccattcgcctgccaagctctgagctgcccaggagaattcagactggtgaa 2390
||| || || ||| | ||||||||| || |||||||||| ||||||||||| || |||||
Sbjct: 427 agggtctccaccacttgcctgccaacctttgagctgccccggagaattcaggctagtgaa 368
Query: 2391 gagcgtattgaggacattaagatcgttggggtcagtgtccgcagc 2435
|||||||||||||||| ||| ||| || ||||| ||||| |||||
Sbjct: 367 gagcgtattgaggacagtaacatcattagggtcggtgtctgcagc 323
>ref|XM_470566.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2157
Score = 1031 bits (520), Expect = 0.0
Identities = 826/928 (89%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2117 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 2058
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2057 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 1998
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcg 582
|| || || ||||| ||||| ||||| || || ||||| |||||||| || |||||||||
Sbjct: 1997 agcacgtcggcaaaccgggagagagacttggcagggtacagacccttcagcgcaggatcg 1938
Query: 583 accatcctgtccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaagtgac 642
||||| ||||||||||| ||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 1937 accattctgtccaatgcatcgatgtcatggagctgtggagtcgcccaccgcacaagtgac 1878
Query: 643 tgttctgacctgggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatg 702
|| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || ||||||
Sbjct: 1877 tgctctgacctcggtctagtgctatcgaaaggtctgcgtcccgtcaaaagctctagcatg 1818
Query: 703 acaactccaaagctgtaaacatcactcttgaaggtgtactgaccggtcatgtccacttct 762
|| |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||| |||
Sbjct: 1817 actactccaaagctgtagacatcgctcttcagtgtgtactgaccagtcatgtccacctct 1758
Query: 763 ggggcagtgtatccggcactttgttctgctgcctggaattcagcaccaggaataaagctt 822
||||||||| | || ||||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 1757 ggggcagtgcacccagcactctgttgcgctgcctggaattctgcatcagaaataaagctt 1698
Query: 823 gcaagtccagcatctgaaaggtgtggattgaattctgagtccagcaaaatatttgacgac 882
|||||||||||||||||||||||||||||||||||||| ||||| | || || || |||
Sbjct: 1697 gcaagtccagcatctgaaaggtgtggattgaattctgaatccagtagaaggttggatgac 1638
Query: 883 ttgaaattcttatggatgatggatggagaacatatttcatgaaggtactccagtgcacgg 942
|||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 1637 ttgaaattcttatggatgatggatggagaacaaatttcatgaagatattccagtgcacgg 1578
Query: 943 gcagagccgagtgcgatcttgatacgagagttccagctaagtggcttgctgtactcatct 1002
|||||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||
Sbjct: 1577 gcagagcctagtgcgatcttgacacgagagttccagctaagtggcttgctgtattcgtct 1518
Query: 1003 gaaaggtggagtagatcatgaagcgatccattcctgtggaaatcatacacaagcaagtgc 1062
||||| |||||||||||||| || || ||||||||||||||||| || |||||||||||
Sbjct: 1517 gaaagatggagtagatcatggagtgacccattcctgtggaaatcgtaaacaagcaagtgt 1458
Query: 1063 tggccatgttccatgcaatagcctacaagctcattcagattcggatggtgcaattttgaa 1122
|| |||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||
Sbjct: 1457 tgcccatgttccatgcaatagcccacaagctcattgagattcggatgatgcagttttgaa 1398
Query: 1123 atgttcgagaccagttcagcaaagtcatcagatgattgaaatggcatcacagtactatct 1182
|||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 1397 atgtctgagaccagttcagcaaaatcatcagatgaatggaatggcatcacggtactatca 1338
Query: 1183 aatttcttgatcgccagaacctttccatcattgaattgtgccctgtaaacacgtccaaaa 1242
| |||||| | ||||||||||||||| || | || ||||||||||| ||||||||||||
Sbjct: 1337 agtttcttcacggccagaacctttccaccagtaaactgtgccctgtatacacgtccaaaa 1278
Query: 1243 gtaccctctccaacaaggttgtcgaagctaaagctatctgttgccatctgtagatctgca 1302
||||| || |||||||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 1277 gtaccttccccaacaaggttgtccatgctaaagctttctgttgccatctgtagatctgca 1218
Query: 1303 actgaataaacagttgccttcataggtg 1330
|||||||||||||||||||| |||||||
Sbjct: 1217 actgaataaacagttgcctttataggtg 1190
Score = 672 bits (339), Expect = 0.0
Identities = 884/1065 (83%), Gaps = 3/1065 (0%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 1152 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 1093
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 1092 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 1033
Query: 1491 gttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccat 1550
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 1032 tttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaa 973
Query: 1551 aacagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccag 1610
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| |||||
Sbjct: 972 tgccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccag 913
Query: 1611 caacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaact 1670
||| ||||| || || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 912 caatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaact 853
Query: 1671 tgatgaaccatcatcattctgacccgcgccattccaatggtttggaggaggaggcgctgt 1730
| |||||| ||| || ||||| | || || | ||||||| ||||| || ||||
Sbjct: 852 t---gaaccaccattgttttgacctgggctgtttggacggtttggtggaggtggagctga 796
Query: 1731 atatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcggtctgtagatt 1790
||| || || || ||||| |||||||| | ||||||||||||||||| || ||||||||
Sbjct: 795 atacggtggaggtggtggtgctggtccattactccaagaatttccgtcagtttgtagatt 736
Query: 1791 gtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacattcag 1850
||||||||||||||| ||||| |||||||| ||||||||||| |||||| ||||||||||
Sbjct: 735 gtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgcaacattcag 676
Query: 1851 ggtttcaaggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaa 1910
|||||||| || || || | |||||||||||||||||||||||| ||||||||||
Sbjct: 675 atcatcaagggggagattagcaaggacattgatataaccagtaaattgattgttctgcag 616
Query: 1911 atacattcttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagaga 1970
||| | | | ||||||||||||||| ||||| | ||||||||| ||||||| ||||||
Sbjct: 615 atataatttcttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagaga 556
Query: 1971 attaaaggagagatccagctctgacaaactataaaggttggaaaatacatcagtgatgtt 2030
||||||||| |||||||| || ||| ||||| ||| |||||||||||||||| || ||
Sbjct: 555 attaaaggaaagatccagtgttgtcaagctatagaggctggaaaatacatcagttatatt 496
Query: 2031 tccttgtagttggttatgattaaggtttaaatacttaagattaggcatcgtcgaaattga 2090
|||||| | |||||||||||| || ||||||||||||||||||| ||||| |||| ||
Sbjct: 495 tccttgcaattggttatgatttagatttaaatacttaagattagacatcgagaaaatcga 436
Query: 2091 gtagggtaaatttccaccaaattgatttcctgcaagattgagtttctcaagcttcatatt 2150
|||||||||||||||| || || |||||||| |||||||| |||||||||| || |
Sbjct: 435 gtagggtaaatttccagtgaactggtttcctgcgagattgagcctctcaagcttattagt 376
Query: 2151 gggaagattgtactgtatttgacctccaccgccaaggttattttggctcatgtcaagctc 2210
|||||||||||||||||| || ||||| |||||||| ||||||||||| || | |||
Sbjct: 375 gggaagattgtactgtatctgttggccaccaccaaggttgttttggctcatatcgatctc 316
Query: 2211 aactaatgaacccaagttattcatgttgtaggccaaatttccagtgagtgacaagtttgg 2270
|| |||||||||| | ||||||| ||||| |||||||| || | ||| |||| ||||
Sbjct: 315 aatcaatgaacccatggtattcatattgtacgccaaattaccggagagccccaagcttgg 256
Query: 2271 taattggattttagtgacccctgatcctgagcaagtaatgcccttccatgactggccaca 2330
||||| |||| ||| || |||||||||||| || || |||| |||||| ||||||||
Sbjct: 255 taatttgattgcagtaactgatgatcctgagcacgtgataccctgccatgattggccaca 196
Query: 2331 aggatcacccccattcgcctgccaagctctgagctgcccaggagaattcagactggtgaa 2390
||| || || ||| | ||||||||| || |||||||||| ||||||||||| || |||||
Sbjct: 195 agggtctccaccacttgcctgccaacctttgagctgccccggagaattcaggctagtgaa 136
Query: 2391 gagcgtattgaggacattaagatcgttggggtcagtgtccgcagc 2435
|||||||||||||||| ||| ||| || ||||| ||||| |||||
Sbjct: 135 gagcgtattgaggacagtaacatcattagggtcggtgtctgcagc 91
>dbj|AK112046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C09, full
insert sequence
Length = 1721
Score = 1023 bits (516), Expect = 0.0
Identities = 825/928 (88%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1438 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 1379
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1378 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 1319
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcg 582
|| || || ||||| ||||| ||||| || || ||||| |||||||| || |||||||||
Sbjct: 1318 agcacgtcggcaaaccgggagagagacttggcagggtacagacccttcagcgcaggatcg 1259
Query: 583 accatcctgtccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaagtgac 642
||||| ||||||||||| ||||||||| | ||||| || || ||||||||||||||||||
Sbjct: 1258 accattctgtccaatgcatcgatgtcacggagctgtggagtcgcccaccgcacaagtgac 1199
Query: 643 tgttctgacctgggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatg 702
|| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || ||||||
Sbjct: 1198 tgctctgacctcggtctagtgctatcgaaaggtctgcgtcccgtcaaaagctctagcatg 1139
Query: 703 acaactccaaagctgtaaacatcactcttgaaggtgtactgaccggtcatgtccacttct 762
|| |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||| |||
Sbjct: 1138 actactccaaagctgtagacatcgctcttcagtgtgtactgaccagtcatgtccacctct 1079
Query: 763 ggggcagtgtatccggcactttgttctgctgcctggaattcagcaccaggaataaagctt 822
||||||||| | || ||||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 1078 ggggcagtgcacccagcactctgttgcgctgcctggaattctgcatcagaaataaagctt 1019
Query: 823 gcaagtccagcatctgaaaggtgtggattgaattctgagtccagcaaaatatttgacgac 882
|||||||||||||||||||||||||||||||||||||| ||||| | || || || |||
Sbjct: 1018 gcaagtccagcatctgaaaggtgtggattgaattctgaatccagtagaaggttggatgac 959
Query: 883 ttgaaattcttatggatgatggatggagaacatatttcatgaaggtactccagtgcacgg 942
|||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 958 ttgaaattcttatggatgatggatggagaacaaatttcatgaagatattccagtgcacgg 899
Query: 943 gcagagccgagtgcgatcttgatacgagagttccagctaagtggcttgctgtactcatct 1002
|||||||| ||||||||||||| |||||||||||||||||||||||||||||| || |||
Sbjct: 898 gcagagcctagtgcgatcttgacacgagagttccagctaagtggcttgctgtattcgtct 839
Query: 1003 gaaaggtggagtagatcatgaagcgatccattcctgtggaaatcatacacaagcaagtgc 1062
||||| |||||||||||||| || || ||||||||||||||||| || |||||||||||
Sbjct: 838 gaaagatggagtagatcatggagtgacccattcctgtggaaatcgtaaacaagcaagtgt 779
Query: 1063 tggccatgttccatgcaatagcctacaagctcattcagattcggatggtgcaattttgaa 1122
|| |||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||||
Sbjct: 778 tgcccatgttccatgcaatagcccacaagctcattgagattcggatgatgcagttttgaa 719
Query: 1123 atgttcgagaccagttcagcaaagtcatcagatgattgaaatggcatcacagtactatct 1182
|||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 718 atgtctgagaccagttcagcaaaatcatcagatgaatggaatggcatcacggtactatca 659
Query: 1183 aatttcttgatcgccagaacctttccatcattgaattgtgccctgtaaacacgtccaaaa 1242
| |||||| | ||||||||||||||| || | || ||||||||||| ||||||||||||
Sbjct: 658 agtttcttcacggccagaacctttccaccagtaaactgtgccctgtatacacgtccaaaa 599
Query: 1243 gtaccctctccaacaaggttgtcgaagctaaagctatctgttgccatctgtagatctgca 1302
||||| || |||||||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 598 gtaccttccccaacaaggttgtccatgctaaagctttctgttgccatctgtagatctgca 539
Query: 1303 actgaataaacagttgccttcataggtg 1330
|||||||||||||||||||| |||||||
Sbjct: 538 actgaataaacagttgcctttataggtg 511
Score = 321 bits (162), Expect = 1e-084
Identities = 398/476 (83%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 473 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 414
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 413 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 354
Query: 1491 gttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccat 1550
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 353 tttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaa 294
Query: 1551 aacagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccag 1610
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| |||||
Sbjct: 293 tgccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccag 234
Query: 1611 caacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaact 1670
||| ||||| || || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 233 caatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaact 174
Query: 1671 tgatgaaccatcatcattctgacccgcgccattccaatggtttggaggaggaggcgctgt 1730
| |||||| ||| || ||||| | || || | ||||||| ||||| || ||||
Sbjct: 173 t---gaaccaccattgttttgacctgggctgtttggacggtttggtggaggtggagctga 117
Query: 1731 atatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcggtctgtagatt 1790
||| || || || ||||| |||||||| | ||||||||||||||||| || ||||||||
Sbjct: 116 atacggtggaggtggtggtgctggtccattactccaagaatttccgtcagtttgtagatt 57
Query: 1791 gtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacat 1846
||||||||||||||| ||||| |||||||| ||||||||||| |||||| ||||||
Sbjct: 56 gtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgcaacat 1
>dbj|AK111516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F24, full
insert sequence
Length = 2433
Score = 638 bits (322), Expect = e-180
Identities = 793/950 (83%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 2154 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 2095
Query: 490 ctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagat 549
||||| || || ||||||||||||||||| |||| ||| || || || ||||| || |||
Sbjct: 2094 ctgaactccggctcaggctggacacacagcgcaatgacgtctgcgaaacgggacagggat 2035
Query: 550 ttagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtca 609
|| || ||||| || |||||||| || || |||||||||| |||||| || |||||||||
Sbjct: 2034 ttggcagggtacaggcccttgagcgctgggtcgaccatccggtccaacgcatcgatgtca 1975
Query: 610 tgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtca 669
||||||||||| ||||||||||| ||||||||||| |||| || | |||||| |||||||
Sbjct: 1974 tgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcgctgtca 1915
Query: 670 aatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactc 729
|||||| | || |||||||| || || |||||||||||||||||||| ||||||||||||
Sbjct: 1914 aatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaacatcactc 1855
Query: 730 ttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttct 789
|||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || || |||
Sbjct: 1854 ttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccctgatct 1795
Query: 790 gctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtgga 849
| ||||||||||||| | |||||| | ||| |||||||||||||| |||| || |||
Sbjct: 1794 gaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgagga 1735
Query: 850 ttgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatgga 909
||||| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||
Sbjct: 1734 ttgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaagga 1675
Query: 910 gaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttgatacga 969
||||| ||||||||||| ||||| ||||| || ||||| || | || ||||| | ||||
Sbjct: 1674 gaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatcttaacacga 1615
Query: 970 gagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaagcgat 1029
|| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| |||||
Sbjct: 1614 gaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcagcgaa 1555
Query: 1030 ccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcctaca 1089
||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| |||
Sbjct: 1554 ccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcccaca 1495
Query: 1090 agctcattcagattcggatggtgcaattttgaaatgttcgagaccagttcagcaaagtca 1149
|||||||| ||||| ||||||||||| ||||||||||| || |||| ||| || ||
Sbjct: 1494 agctcattgagattgggatggtgcaactttgaaatgtttgacaccaagtcaaagaaatcg 1435
Query: 1150 tcagatgattgaaatggcatcacagtactatctaatttcttgatcgccagaacctttcca 1209
|| || ||||| ||||| ||||||||| | || |||||||| || || |||||||||
Sbjct: 1434 tctgaagattggcttggcaacacagtactgtttagtttcttgacagctagtacctttcca 1375
Query: 1210 tcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaggttgtcgaag 1269
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 1374 tcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagattgtccatg 1315
Query: 1270 ctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgccttcataggt 1329
| || |||||||||||||||||||| ||||||||||||||||| ||||| || | | |
Sbjct: 1314 ttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgcttttactgat 1255
Query: 1330 gttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
| | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 1254 gctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 1205
Score = 317 bits (160), Expect = 2e-083
Identities = 412/496 (83%)
Strand = Plus / Minus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 852 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 793
Query: 1780 gtctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgttt 1839
|| || ||| | ||||| ||||| |||| | | |||||||||||||| ||| ||||||||
Sbjct: 792 gtttgaagactatttattttctttagctcattaggaatccaaccagtaaaacggttgttt 733
Query: 1840 ccaacattcagggtttcaaggggaaggttggctaagacattgatataaccagtaaattgg 1899
|| ||||| | | || |||||||| || || | ||||||||| | ||||||||||||
Sbjct: 732 cccacatttaaattatccaggggaagattagcaaggacattgattgatccagtaaattgg 673
Query: 1900 ttgttctgcaaatacattcttttcaggcttgacaatccagtgaaactttgtggtagatca 1959
|||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 672 ttgttctgcagatacaaagttttcaggcttgacagagaagtgaaactttgtgggagatca 613
Query: 1960 ccagtaagagaattaaaggagagatccagctctgacaaactataaaggttggaaaataca 2019
|||||||||||||| ||||||||||| || ||| ||||| |||||||||||| |||
Sbjct: 612 ccagtaagagaatttaaggagagatcaagtgttgataaacttggaaggttggaaaagaca 553
Query: 2020 tcagtgatgtttccttgtagttggttatgattaaggtttaaatacttaagattaggcatc 2079
|| || || |||||||||| |||||||||||||||||||| ||||||||| ||||||||
Sbjct: 552 tctgtcatatttccttgtaattggttatgattaaggtttagatacttaagtttaggcatt 493
Query: 2080 gtcgaaattgagtagggtaaatttccaccaaattgatttcctgcaagattgagtttctca 2139
|| ||||||||||| || | ||||||| |||| || || || ||||||||||| |||||
Sbjct: 492 gtggaaattgagtatggcacatttccagcaaactggttcccagcaagattgagcctctca 433
Query: 2140 agcttcatattgggaagattgtactgtatttgacctccaccgccaaggttattttggctc 2199
|||||| |||| ||||||||||| || || | ||||| ||||| ||||||||||||
Sbjct: 432 agcttcttatttggaagattgtattgaatattttggccacccccaagattattttggctc 373
Query: 2200 atgtcaagctcaacta 2215
||||||||||||||||
Sbjct: 372 atgtcaagctcaacta 357
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1477 ataggcttcatgtcgttaacttcatttgaagggaaggaagtgaacggctgatgctgttca 1536
|||||||||| || ||||||||||| |||||| | ||| |||| ||||| ||||||||
Sbjct: 1104 ataggcttcacatctttaacttcattggaagggtatgaattgaaaggctgtcgctgttca 1045
Query: 1537 aaatgttctt 1546
| ||||||||
Sbjct: 1044 acatgttctt 1035
>gb|AY224517.1| Oryza sativa (japonica cultivar-group) isolate 20144 putative
leucine-rich repeat transmembrane protein kinase mRNA,
complete cds
Length = 2202
Score = 638 bits (322), Expect = e-180
Identities = 793/950 (83%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 2135 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 2076
Query: 490 ctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagat 549
||||| || || ||||||||||||||||| |||| ||| || || || ||||| || |||
Sbjct: 2075 ctgaactccggctcaggctggacacacagcgcaatgacgtctgcgaaacgggacagggat 2016
Query: 550 ttagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtca 609
|| || ||||| || |||||||| || || |||||||||| |||||| || |||||||||
Sbjct: 2015 ttggcagggtacaggcccttgagcgctgggtcgaccatccggtccaacgcatcgatgtca 1956
Query: 610 tgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtca 669
||||||||||| ||||||||||| ||||||||||| |||| || | |||||| |||||||
Sbjct: 1955 tgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcgctgtca 1896
Query: 670 aatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactc 729
|||||| | || |||||||| || || |||||||||||||||||||| ||||||||||||
Sbjct: 1895 aatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaacatcactc 1836
Query: 730 ttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttct 789
|||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || || |||
Sbjct: 1835 ttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccctgatct 1776
Query: 790 gctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtgga 849
| ||||||||||||| | |||||| | ||| |||||||||||||| |||| || |||
Sbjct: 1775 gaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgagga 1716
Query: 850 ttgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatgga 909
||||| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||
Sbjct: 1715 ttgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaagga 1656
Query: 910 gaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttgatacga 969
||||| ||||||||||| ||||| ||||| || ||||| || | || ||||| | ||||
Sbjct: 1655 gaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatcttaacacga 1596
Query: 970 gagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaagcgat 1029
|| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| |||||
Sbjct: 1595 gaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcagcgaa 1536
Query: 1030 ccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcctaca 1089
||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| |||
Sbjct: 1535 ccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcccaca 1476
Query: 1090 agctcattcagattcggatggtgcaattttgaaatgttcgagaccagttcagcaaagtca 1149
|||||||| ||||| ||||||||||| ||||||||||| || |||| ||| || ||
Sbjct: 1475 agctcattgagattgggatggtgcaactttgaaatgtttgacaccaagtcaaagaaatcg 1416
Query: 1150 tcagatgattgaaatggcatcacagtactatctaatttcttgatcgccagaacctttcca 1209
|| || ||||| ||||| ||||||||| | || |||||||| || || |||||||||
Sbjct: 1415 tctgaagattggcttggcaacacagtactgtttagtttcttgacagctagtacctttcca 1356
Query: 1210 tcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaggttgtcgaag 1269
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct: 1355 tcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagattgtccatg 1296
Query: 1270 ctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgccttcataggt 1329
| || |||||||||||||||||||| ||||||||||||||||| ||||| || | | |
Sbjct: 1295 ttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgcttttactgat 1236
Query: 1330 gttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
| | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 1235 gctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 1186
Score = 317 bits (160), Expect = 2e-083
Identities = 412/496 (83%)
Strand = Plus / Minus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 833 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 774
Query: 1780 gtctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgttt 1839
|| || ||| | ||||| ||||| |||| | | |||||||||||||| ||| ||||||||
Sbjct: 773 gtttgaagactatttattttctttagctcattaggaatccaaccagtaaaacggttgttt 714
Query: 1840 ccaacattcagggtttcaaggggaaggttggctaagacattgatataaccagtaaattgg 1899
|| ||||| | | || |||||||| || || | ||||||||| | ||||||||||||
Sbjct: 713 cccacatttaaattatccaggggaagattagcaaggacattgattgatccagtaaattgg 654
Query: 1900 ttgttctgcaaatacattcttttcaggcttgacaatccagtgaaactttgtggtagatca 1959
|||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 653 ttgttctgcagatacaaagttttcaggcttgacagagaagtgaaactttgtgggagatca 594
Query: 1960 ccagtaagagaattaaaggagagatccagctctgacaaactataaaggttggaaaataca 2019
|||||||||||||| ||||||||||| || ||| ||||| |||||||||||| |||
Sbjct: 593 ccagtaagagaatttaaggagagatcaagtgttgataaacttggaaggttggaaaagaca 534
Query: 2020 tcagtgatgtttccttgtagttggttatgattaaggtttaaatacttaagattaggcatc 2079
|| || || |||||||||| |||||||||||||||||||| ||||||||| ||||||||
Sbjct: 533 tctgtcatatttccttgtaattggttatgattaaggtttagatacttaagtttaggcatt 474
Query: 2080 gtcgaaattgagtagggtaaatttccaccaaattgatttcctgcaagattgagtttctca 2139
|| ||||||||||| || | ||||||| |||| || || || ||||||||||| |||||
Sbjct: 473 gtggaaattgagtatggcacatttccagcaaactggttcccagcaagattgagcctctca 414
Query: 2140 agcttcatattgggaagattgtactgtatttgacctccaccgccaaggttattttggctc 2199
|||||| |||| ||||||||||| || || | ||||| ||||| ||||||||||||
Sbjct: 413 agcttcttatttggaagattgtattgaatattttggccacccccaagattattttggctc 354
Query: 2200 atgtcaagctcaacta 2215
||||||||||||||||
Sbjct: 353 atgtcaagctcaacta 338
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1477 ataggcttcatgtcgttaacttcatttgaagggaaggaagtgaacggctgatgctgttca 1536
|||||||||| || ||||||||||| |||||| | ||| |||| ||||| ||||||||
Sbjct: 1085 ataggcttcacatctttaacttcattggaagggtatgaattgaaaggctgtcgctgttca 1026
Query: 1537 aaatgttctt 1546
| ||||||||
Sbjct: 1025 acatgttctt 1016
>gb|CB658275.1|CB658275 OSJNEc14D04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14D04 5', mRNA sequence
Length = 821
Score = 523 bits (264), Expect = e-145
Identities = 648/776 (83%)
Strand = Plus / Minus
Query: 604 atgtcatgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagag 663
||||||||||||||||| ||||||||||| ||||||||||| |||| || | |||||| |
Sbjct: 821 atgtcatgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcg 762
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 761 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 702
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactt 783
|||||||||| ||| ||||| || |||||||| ||||| |||||| | ||||| | ||
Sbjct: 701 tcactcttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccc 642
Query: 784 tgttctgctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaagg 843
|| |||| ||||||||||||| | |||||| | ||| |||||||||||||| ||||
Sbjct: 641 tgatctgaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaaca 582
Query: 844 tgtggattgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatg 903
|| |||||||| || | ||||||||| ||||| || |||||||| ||||| ||||| ||
Sbjct: 581 tgaggattgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataata 522
Query: 904 gatggagaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttg 963
|| |||||||| ||||||||||| ||||| ||||| || ||||| || | || |||||
Sbjct: 521 gaaggagaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatctta 462
Query: 964 atacgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatga 1023
| |||||| |||||||| ||||| ||||| || ||||||| ||||| || | ||||||
Sbjct: 461 acacgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgc 402
Query: 1024 agcgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatag 1083
||||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||
Sbjct: 401 agcgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatag 342
Query: 1084 cctacaagctcattcagattcggatggtgcaattttgaaatgttcgagaccagttcagca 1143
|| ||||||||||| ||||| ||||||||||| ||||||||||| || |||| |||
Sbjct: 341 cccacaagctcattgagattgggatggtgcaactttgaaatgtttgacaccaagtcaaag 282
Query: 1144 aagtcatcagatgattgaaatggcatcacagtactatctaatttcttgatcgccagaacc 1203
|| || || || ||||| ||||| ||||||||| | || |||||||| || || |||
Sbjct: 281 aaatcgtctgaagattggcttggcaacacagtactgtttagtttcttgacagctagtacc 222
Query: 1204 tttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaggttg 1263
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 221 tttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagattg 162
Query: 1264 tcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgccttc 1323
|| | | | || |||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 161 tccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgctttt 102
Query: 1324 ataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
| | || | | ||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 101 actgatgctgaaatacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 46
>gb|CB649657.1|CB649657 OSJNEb13L15.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13L15 3', mRNA sequence
Length = 835
Score = 502 bits (253), Expect = e-139
Identities = 436/497 (87%)
Strand = Plus / Plus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 339 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 398
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 399 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 458
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcg 582
|| || || ||||| ||||| ||||| || || ||||| |||||||| || |||||||||
Sbjct: 459 agcacgtcggcaaaccgggagagagacttggcagggtacagacccttcagcgcaggatcg 518
Query: 583 accatcctgtccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaagtgac 642
||||| ||||||||||| ||||||||||| ||||| || || ||||||||||||||||||
Sbjct: 519 accattctgtccaatgcatcgatgtcatggagctgtggagtcgcccaccgcacaagtgac 578
Query: 643 tgttctgacctgggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatg 702
|| |||||||| ||||||| ||| || || ||||| ||||| ||||| || || ||||||
Sbjct: 579 tgctctgacctcggtctagtgctatcgaaaggtctgcgtcccgtcaaaagctctagcatg 638
Query: 703 acaactccaaagctgtaaacatcactcttgaaggtgtactgaccggtcatgtccacttct 762
|| |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||| |||
Sbjct: 639 actactccaaagctgtagacatcgctcttcagtgtgtactgaccagtcatgtccacctct 698
Query: 763 ggggcagtgtatccggcactttgttctgctgcctggaattcagcaccaggaataaagctt 822
||||||||| | || ||||| |||| |||||||||||||| ||| ||| ||||||||||
Sbjct: 699 ggggcagtgcacccagcactctgttgcgctgcctggaattctgcatcagaaataaagctt 758
Query: 823 gcaagtccagcatctgaaaggtgtggattgaattctgagtccagcaaaatatttgacgac 882
|||||||||||||||||||||||||||||||||||||| ||||| | || || || |||
Sbjct: 759 gcaagtccagcatctgaaaggtgtggattgaattctgaatccagtagaaggttggatgac 818
Query: 883 ttgaaattcttatggat 899
|||||||||||||||||
Sbjct: 819 ttgaaattcttatggat 835
>ref|NM_196278.1| Oryza sativa (japonica cultivar-group) putative leucine-rich repeat
transmembrane protein kinase 1 (OSJNBb0061I18.16), mRNA
Length = 2211
Score = 488 bits (246), Expect = e-135
Identities = 585/698 (83%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 2144 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 2085
Query: 490 ctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagat 549
||||| || || ||||||||||||||||| |||| ||| || || || ||||| || |||
Sbjct: 2084 ctgaactccggctcaggctggacacacagcgcaatgacgtctgcgaaacgggacagggat 2025
Query: 550 ttagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtca 609
|| || ||||| || |||||||| || || |||||||||| |||||| || |||||||||
Sbjct: 2024 ttggcagggtacaggcccttgagcgctgggtcgaccatccggtccaacgcatcgatgtca 1965
Query: 610 tgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtca 669
||||||||||| ||||||||||| ||||||||||| |||| || | |||||| |||||||
Sbjct: 1964 tgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcgctgtca 1905
Query: 670 aatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactc 729
|||||| | || |||||||| || || |||||||||||||||||||| ||||||||||||
Sbjct: 1904 aatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaacatcactc 1845
Query: 730 ttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttct 789
|||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || || |||
Sbjct: 1844 ttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccctgatct 1785
Query: 790 gctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtgga 849
| ||||||||||||| | |||||| | ||| |||||||||||||| |||| || |||
Sbjct: 1784 gaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgagga 1725
Query: 850 ttgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatgga 909
||||| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||
Sbjct: 1724 ttgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaagga 1665
Query: 910 gaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttgatacga 969
||||| ||||||||||| ||||| ||||| || ||||| || | || ||||| | ||||
Sbjct: 1664 gaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatcttaacacga 1605
Query: 970 gagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaagcgat 1029
|| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| |||||
Sbjct: 1604 gaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcagcgaa 1545
Query: 1030 ccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcctaca 1089
||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| |||
Sbjct: 1544 ccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcccaca 1485
Query: 1090 agctcattcagattcggatggtgcaattttgaaatgtt 1127
|||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1484 agctcattgagattgggatggtgcaactttgaaatgtt 1447
Score = 176 bits (89), Expect = 4e-041
Identities = 155/177 (87%)
Strand = Plus / Minus
Query: 1203 ctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaggtt 1262
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1248 ctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagatt 1189
Query: 1263 gtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcctt 1322
||| | | | || |||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 1188 gtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgcttt 1129
Query: 1323 cataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
| | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 1128 tactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 1072
Score = 174 bits (88), Expect = 2e-040
Identities = 181/212 (85%)
Strand = Plus / Minus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggtttaaata 2063
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||| |||
Sbjct: 507 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggtttagata 448
Query: 2064 cttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcctgc 2123
|||||| |||||||| || ||||||||||| || | ||||||| |||| || || || ||
Sbjct: 447 cttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttcccagc 388
Query: 2124 aagattgagtttctcaagcttcatattgggaagattgtactgtatttgacctccaccgcc 2183
||||||||| ||||||||||| |||| ||||||||||| || || | ||||| ||
Sbjct: 387 aagattgagcctctcaagcttcttatttggaagattgtattgaatattttggccaccccc 328
Query: 2184 aaggttattttggctcatgtcaagctcaacta 2215
||| ||||||||||||||||||||||||||||
Sbjct: 327 aagattattttggctcatgtcaagctcaacta 296
Score = 103 bits (52), Expect = 5e-019
Identities = 160/196 (81%)
Strand = Plus / Minus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 719 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 660
Query: 1780 gtctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgttt 1839
|| || ||| | ||||| ||||| |||| | | |||||||||||||| ||| ||||||||
Sbjct: 659 gtttgaagactatttattttctttagctcattaggaatccaaccagtaaaacggttgttt 600
Query: 1840 ccaacattcagggtttcaaggggaaggttggctaagacattgatataaccagtaaattgg 1899
|| ||||| | | || |||||||| || || | ||||||||| | ||||||||||||
Sbjct: 599 cccacatttaaattatccaggggaagattagcaaggacattgattgatccagtaaattgg 540
Query: 1900 ttgttctgcaaataca 1915
|||||||||| |||||
Sbjct: 539 ttgttctgcagataca 524
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 1477 ataggcttcatgtcgttaacttcatttgaagggaaggaagtgaacggctgatgctgttca 1536
|||||||||| || ||||||||||| |||||| | ||| |||| ||||| ||||||||
Sbjct: 971 ataggcttcacatctttaacttcattggaagggtatgaattgaaaggctgtcgctgttca 912
Query: 1537 aaatgttctt 1546
| ||||||||
Sbjct: 911 acatgttctt 902
>gb|CB677383.1|CB677383 OSJNEe14E08.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe14E08 5', mRNA sequence
Length = 795
Score = 484 bits (244), Expect = e-133
Identities = 659/797 (82%), Gaps = 3/797 (0%)
Strand = Plus / Minus
Query: 1633 acacctccaccacctatcccagatcttccaccagaacttgatgaaccatcatcattctga 1692
||||||||||||| ||||||||| ||||||||||||||| |||||| ||| || |||
Sbjct: 795 acacctccaccacntatcccagagcttccaccagaactt---gaaccaccattgttttga 739
Query: 1693 cccgcgccattccaatggtttggaggaggaggcgctgtatatggaggtggaggtggcgct 1752
|| | || || | ||||||| ||||| || |||| ||| || || || ||||| |||
Sbjct: 738 cctgggctgtttggacggtttggtggaggtggagctgaatacggtggaggtggtggtgct 679
Query: 1753 ggtcctgtgctccaagaatttccgtcggtctgtagattgtttatcttcttaagctgactg 1812
||||| | ||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 678 ggtccattactccaagaatttccgtcagtttgtagattgtttatcttcttaagttgacta 619
Query: 1813 ggaatccaaccagtgaaatggttgtttccaacattcagggtttcaaggggaaggttggct 1872
|||||||| ||||||||||| |||||| |||||||||| |||||||| || || ||
Sbjct: 618 ggaatccagccagtgaaatgattgtttgcaacattcagatcatcaagggggagattagca 559
Query: 1873 aagacattgatataaccagtaaattggttgttctgcaaatacattcttttcaggcttgac 1932
| |||||||||||||||||||||||| |||||||||| ||| | | | ||||||||||||
Sbjct: 558 aggacattgatataaccagtaaattgattgttctgcagatataatttcttcaggcttgac 499
Query: 1933 aatccagtgaaactttgtggtagatcaccagtaagagaattaaaggagagatccagctct 1992
||| ||||| | ||||||||| ||||||| ||||||||||||||| |||||||| |
Sbjct: 498 aatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaaagatccagtgtt 439
Query: 1993 gacaaactataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatta 2052
| ||| ||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 438 gtcaagctatagaggctggaaaatacatcagttatatttccttgcaattggttatgattt 379
Query: 2053 aggtttaaatacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaat 2112
|| ||||||||||||||||||| ||||| |||| |||||||||||||||||| ||
Sbjct: 378 agatttaaatacttaagattagacatcgagaaaatcgagtagggtaaatttccagtgaac 319
Query: 2113 tgatttcctgcaagattgagtttctcaagcttcatattgggaagattgtactgtatttga 2172
|| |||||||| |||||||| |||||||||| || ||||||||||||||||||| ||
Sbjct: 318 tggtttcctgcgagattgagcctctcaagcttattagtgggaagattgtactgtatctgt 259
Query: 2173 cctccaccgccaaggttattttggctcatgtcaagctcaactaatgaacccaagttattc 2232
||||| |||||||| ||||||||||| || | ||||| |||||||||| | |||||
Sbjct: 258 tggccaccaccaaggttgttttggctcatatcgatctcaatcaatgaacccatggtattc 199
Query: 2233 atgttgtaggccaaatttccagtgagtgacaagtttggtaattggattttagtgacccct 2292
|| ||||| |||||||| || | ||| |||| ||||||||| |||| ||| || |
Sbjct: 198 atattgtacgccaaattaccggagagccccaagcttggtaatttgattgcagtaactgat 139
Query: 2293 gatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctgc 2352
||||||||||| || || |||| |||||| ||||||||||| || || ||| | ||||||
Sbjct: 138 gatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctgc 79
Query: 2353 caagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggacattaaga 2412
||| || |||||||||| ||||||||||| || ||||||||||||||||||||| ||| |
Sbjct: 78 caacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggacagtaaca 19
Query: 2413 tcgttggggtcagtgtc 2429
|| || ||||| |||||
Sbjct: 18 tcattagggtcggtgtc 2
>gb|CB649656.1|CB649656 OSJNEb13L15.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13L15 5', mRNA sequence
Length = 827
Score = 468 bits (236), Expect = e-129
Identities = 578/692 (83%)
Strand = Plus / Minus
Query: 1744 ggtggcgctggtcctgtgctccaagaatttccgtcggtctgtagattgtttatcttctta 1803
||||| |||||||| | ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 807 ggtggtgctggtccattactccaagaatttccgtcagtttgtagattgtttatcttctta 748
Query: 1804 agctgactgggaatccaaccagtgaaatggttgtttccaacattcagggtttcaagggga 1863
|| ||||| |||||||| ||||||||||| |||||| |||||||||| ||||||||
Sbjct: 747 agttgactaggaatccagccagtgaaatgattgtttgcaacattcagatcatcaaggggg 688
Query: 1864 aggttggctaagacattgatataaccagtaaattggttgttctgcaaatacattcttttc 1923
|| || || | |||||||||||||||||||||||| |||||||||| ||| | | | |||
Sbjct: 687 agattagcaaggacattgatataaccagtaaattgattgttctgcagatataatttcttc 628
Query: 1924 aggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggagaga 1983
|||||||||||| ||||| | ||||||||| ||||||| ||||||||||||||| |||
Sbjct: 627 aggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaaaga 568
Query: 1984 tccagctctgacaaactataaaggttggaaaatacatcagtgatgtttccttgtagttgg 2043
||||| || ||| ||||| ||| |||||||||||||||| || |||||||| | ||||
Sbjct: 567 tccagtgttgtcaagctatagaggctggaaaatacatcagttatatttccttgcaattgg 508
Query: 2044 ttatgattaaggtttaaatacttaagattaggcatcgtcgaaattgagtagggtaaattt 2103
|||||||| || ||||||||||||||||||| ||||| |||| |||||||||||||||
Sbjct: 507 ttatgatttagatttaaatacttaagattagacatcgagaaaatcgagtagggtaaattt 448
Query: 2104 ccaccaaattgatttcctgcaagattgagtttctcaagcttcatattgggaagattgtac 2163
||| || || |||||||| |||||||| |||||||||| || ||||||||||||||
Sbjct: 447 ccagtgaactggtttcctgcgagattgagcctctcaagcttattagtgggaagattgtac 388
Query: 2164 tgtatttgacctccaccgccaaggttattttggctcatgtcaagctcaactaatgaaccc 2223
||||| || ||||| |||||||| ||||||||||| || | ||||| |||||||||
Sbjct: 387 tgtatctgttggccaccaccaaggttgttttggctcatatcgatctcaatcaatgaaccc 328
Query: 2224 aagttattcatgttgtaggccaaatttccagtgagtgacaagtttggtaattggatttta 2283
| | ||||||| ||||| |||||||| || | ||| |||| ||||||||| |||| |
Sbjct: 327 atggtattcatattgtacgccaaattaccggagagccccaagcttggtaatttgattgca 268
Query: 2284 gtgacccctgatcctgagcaagtaatgcccttccatgactggccacaaggatcaccccca 2343
|| || |||||||||||| || || |||| |||||| ||||||||||| || || |||
Sbjct: 267 gtaactgatgatcctgagcacgtgataccctgccatgattggccacaagggtctccacca 208
Query: 2344 ttcgcctgccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgagg 2403
| ||||||||| || |||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 207 cttgcctgccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgagg 148
Query: 2404 acattaagatcgttggggtcagtgtccgcagc 2435
||| ||| ||| || ||||| ||||| |||||
Sbjct: 147 acagtaacatcattagggtcggtgtctgcagc 116
>gb|CF326044.1|CF326044 JMT1--04-P08.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-P08, mRNA sequence
Length = 651
Score = 371 bits (187), Expect = 1e-099
Identities = 286/319 (89%)
Strand = Plus / Minus
Query: 1012 agtagatcatgaagcgatccattcctgtggaaatcatacacaagcaagtgctggccatgt 1071
||||||||||| || || ||||||||||||||||| || ||||||||||| || ||||||
Sbjct: 651 agtagatcatggagtgacccattcctgtggaaatcgtaaacaagcaagtgttgcccatgt 592
Query: 1072 tccatgcaatagcctacaagctcattcagattcggatggtgcaattttgaaatgttcgag 1131
|||||||||||||| ||||||||||| ||||||||||| |||| ||||||||||| |||
Sbjct: 591 tccatgcaatagcccacaagctcattgagattcggatgatgcagttttgaaatgtctgag 532
Query: 1132 accagttcagcaaagtcatcagatgattgaaatggcatcacagtactatctaatttcttg 1191
|||||||||||||| ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 531 accagttcagcaaaatcatcagatgaatggaatggcatcacggtactatcaagtttcttc 472
Query: 1192 atcgccagaacctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctct 1251
| ||||||||||||||| || | || ||||||||||| ||||||||||||||||| ||
Sbjct: 471 acggccagaacctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttcc 412
Query: 1252 ccaacaaggttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataa 1311
|||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 411 ccaacaaggttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataa 352
Query: 1312 acagttgccttcataggtg 1330
||||||||||| |||||||
Sbjct: 351 acagttgcctttataggtg 333
Score = 224 bits (113), Expect = 2e-055
Identities = 242/285 (84%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 295 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 236
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 235 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 176
Query: 1491 gttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccat 1550
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 175 tttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaa 116
Query: 1551 aacagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccag 1610
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| |||||
Sbjct: 115 tgccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccag 56
Query: 1611 caacgatataatgattcctgctacacctccaccacctatcccaga 1655
||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 55 caatgatatgataatgcctgctacacctccaccacctatcccaga 11
>gb|C99705.1|C99705 C99705 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21126_4Z, mRNA sequence
Length = 715
Score = 351 bits (177), Expect = 1e-093
Identities = 375/435 (86%), Gaps = 5/435 (1%)
Strand = Plus / Minus
Query: 418 agcatcctcttcgtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctct 477
||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 495 agcattctcttcgtcatgttggccctctggacaagacgaaccaatgcttgcaccacctct 436
Query: 478 gacattggtggcctgaattctggttcagg-ctggacacacagggcaaggacatcag-caa 535
||||||||||||||||||||||||||||| ||||||||||| || || || || | |||
Sbjct: 435 gacattggtggcctgaattctggttcagggctggacacacaaagcgagcacgtcgggcaa 376
Query: 536 atcgggatagagatttagctgggtatagacccttgagtgcaggatcgaccatcctgtcca 595
| ||||| ||||| || || ||||| |||||||| || |||||||||||||| |||||||
Sbjct: 375 accgggagagagacttggcagggtacagacccttcagcgcaggatcgaccattctgtcca 316
Query: 596 atgcgtcgatgtcatgcagctggggtgttgcccaccg-cacaagtgactgttctgacctg 654
|||| ||||||||||| ||||| || || |||||||| |||||||||||| ||||||||
Sbjct: 315 atgcatcgatgtcatggagctgtggagtcgcccaccggcacaagtgactgctctgacctc 256
Query: 655 ggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaag 714
||||||| ||| || || || || ||||| ||||| || || |||||||| |||||||||
Sbjct: 255 ggtctagtgctatcgaaaggnctgcgtcccgtcaaaagctctagcatgactactccaaag 196
Query: 715 ctgtaaacatcactcttgaaggtgtactgaccggtcatgtccacttctggggcagtgtat 774
||||| ||||| ||||| | ||||||||||| |||||||||| ||||||||| || |
Sbjct: 195 ctgtagacatcgctcttcagtgtgtactgaccagtcatgtccanctctggggca-tgcac 137
Query: 775 ccggcactttgttctgctgcct-ggaattcagcaccaggaataaagcttgcaagtccagc 833
|| ||||| |||| ||||||| ||||| ||| ||| |||||||||||||||||||||
Sbjct: 136 ccagcactctgttgcgctgcctgggaatctggcatcagaaataaagcttgcaagtccagc 77
Query: 834 atctgaaaggtgtgg 848
|||||||||||||||
Sbjct: 76 atctgaaaggtgtgg 62
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0032G08, from Chromosome 3, complete sequence
Length = 122052
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Plus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 43648 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 43707
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 43708 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 43767
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 43768 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 43827
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 43828 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 43887
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 43888 atcacggtactatcaagtttcttcacggccagaacct 43924
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 44636 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 44695
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 44696 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 44755
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 44756 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 44815
Query: 1672 ga 1673
||
Sbjct: 44816 ga 44817
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 43065 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 43124
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 43125 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 43184
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 43185 aaatttcatgaag 43197
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 44255 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 44314
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44315 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 44374
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 44375 tttataggtg 44384
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Plus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 42175 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 42234
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42235 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 42281
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 42378 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 42437
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 42438 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 42497
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 42498 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 42538
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 46135 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 46194
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 46195 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 46249
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 42651 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 42710
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 42711 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 42770
Query: 793 gcctg 797
|||||
Sbjct: 42771 gcctg 42775
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 86981 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 87040
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 87041 gcagctttgcgttttcttctccttatcacaaagaatgcaa 87080
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 44999 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 45058
Query: 1842 aacattc 1848
|||||||
Sbjct: 45059 aacattc 45065
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 87269 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 87328
Query: 1842 aacattc 1848
|||||||
Sbjct: 87329 aacattc 87335
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 45296 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 45355
Query: 1981 agatcc 1986
||||||
Sbjct: 45356 agatcc 45361
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 45170 gacattgatataaccagtaaattgattgttctgca 45204
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 45498 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 45550
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 45645 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 45692
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Plus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 44422 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 44481
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 44482 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 44541
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 87442 gacattgatataaccagtaaatttattgttctgca 87476
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 45803 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 45862
Query: 2195 ggctcat 2201
|||||||
Sbjct: 45863 ggctcat 45869
>gb|AACV01005997.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005997, whole
genome shotgun sequence
Length = 37651
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Plus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 22393 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 22452
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 22453 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 22512
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 22513 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 22572
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 22573 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 22632
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 22633 atcacggtactatcaagtttcttcacggccagaacct 22669
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 23381 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 23440
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 23441 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 23500
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 23501 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 23560
Query: 1672 ga 1673
||
Sbjct: 23561 ga 23562
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 21810 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 21869
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 21870 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 21929
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 21930 aaatttcatgaag 21942
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 23000 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 23059
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23060 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 23119
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 23120 tttataggtg 23129
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Plus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 20920 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 20979
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20980 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 21026
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 21123 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 21182
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 21183 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 21242
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 21243 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 21283
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 24879 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 24938
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 24939 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 24993
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Plus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 21396 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 21455
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 21456 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 21515
Query: 793 gcctg 797
|||||
Sbjct: 21516 gcctg 21520
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 23744 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 23803
Query: 1842 aacattc 1848
|||||||
Sbjct: 23804 aacattc 23810
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 24040 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 24099
Query: 1981 agatcc 1986
||||||
Sbjct: 24100 agatcc 24105
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 23915 gacattgatataaccagtaaattgattgttctgca 23949
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 24242 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 24294
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 24389 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 24436
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Plus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 23167 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 23226
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 23227 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 23286
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 24547 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 24606
Query: 2195 ggctcat 2201
|||||||
Sbjct: 24607 ggctcat 24613
>ref|NT_079911.2| Oryza sativa (japonica cultivar-group)
Length = 736097
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Minus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 283492 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 283433
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 283432 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 283373
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 283372 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 283313
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 283312 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 283253
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 283252 atcacggtactatcaagtttcttcacggccagaacct 283216
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 282504 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 282445
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 282444 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 282385
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 282384 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 282325
Query: 1672 ga 1673
||
Sbjct: 282324 ga 282323
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 284075 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 284016
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 284015 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 283956
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 283955 aaatttcatgaag 283943
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 282885 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 282826
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282825 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 282766
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 282765 tttataggtg 282756
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 284965 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 284906
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284905 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 284859
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 284762 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 284703
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 284702 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 284643
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 284642 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 284602
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 281005 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 280946
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 280945 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 280891
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 284489 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 284430
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 284429 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 284370
Query: 793 gcctg 797
|||||
Sbjct: 284369 gcctg 284365
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 240159 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 240100
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 240099 gcagctttgcgttttcttctccttatcacaaagaatgcaa 240060
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 282141 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 282082
Query: 1842 aacattc 1848
|||||||
Sbjct: 282081 aacattc 282075
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 239871 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 239812
Query: 1842 aacattc 1848
|||||||
Sbjct: 239811 aacattc 239805
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 281844 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 281785
Query: 1981 agatcc 1986
||||||
Sbjct: 281784 agatcc 281779
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 281970 gacattgatataaccagtaaattgattgttctgca 281936
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 281642 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 281590
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 282718 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 282659
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 282658 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 282599
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 281495 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 281448
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 281337 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 281278
Query: 2195 ggctcat 2201
|||||||
Sbjct: 281277 ggctcat 281271
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 239698 gacattgatataaccagtaaatttattgttctgca 239664
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Minus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 4360445 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 4360386
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 4360385 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 4360326
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 4360325 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 4360266
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 4360265 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 4360206
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 4360205 atcacggtactatcaagtttcttcacggccagaacct 4360169
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 4359457 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 4359398
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 4359397 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 4359338
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4359337 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 4359278
Query: 1672 ga 1673
||
Sbjct: 4359277 ga 4359276
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361028 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 4360969
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 4360968 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 4360909
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 4360908 aaatttcatgaag 4360896
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 4359838 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 4359779
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4359778 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 4359719
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 4359718 tttataggtg 4359709
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4361918 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 4361859
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361858 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 4361812
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 4361715 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 4361656
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 4361655 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 4361596
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 4361595 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 4361555
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 4357959 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 4357900
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 4357899 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 4357845
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 4361442 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 4361383
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 4361382 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 4361323
Query: 793 gcctg 797
|||||
Sbjct: 4361322 gcctg 4361318
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 4315985 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 4315926
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 4315925 gcagctttgcgttttcttctccttatcacaaagaatgcaa 4315886
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 4359094 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 4359035
Query: 1842 aacattc 1848
|||||||
Sbjct: 4359034 aacattc 4359028
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 4315697 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 4315638
Query: 1842 aacattc 1848
|||||||
Sbjct: 4315637 aacattc 4315631
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 4358798 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 4358739
Query: 1981 agatcc 1986
||||||
Sbjct: 4358738 agatcc 4358733
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 4358923 gacattgatataaccagtaaattgattgttctgca 4358889
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 4358596 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 4358544
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 4359671 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 4359612
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 4359611 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 4359552
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 4358449 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 4358402
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 4358291 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 4358232
Query: 2195 ggctcat 2201
|||||||
Sbjct: 4358231 ggctcat 4358225
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 4315524 gacattgatataaccagtaaatttattgttctgca 4315490
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Minus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 4552807 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 4552748
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 4552747 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 4552688
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 4552687 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 4552628
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 4552627 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 4552568
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 4552567 atcacggtactatcaagtttcttcacggccagaacct 4552531
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 4551819 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 4551760
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 4551759 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 4551700
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4551699 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 4551640
Query: 1672 ga 1673
||
Sbjct: 4551639 ga 4551638
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4553390 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 4553331
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 4553330 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 4553271
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 4553270 aaatttcatgaag 4553258
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 4552200 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 4552141
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552140 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 4552081
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 4552080 tttataggtg 4552071
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4554280 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 4554221
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4554220 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 4554174
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 4554077 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 4554018
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 4554017 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 4553958
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 4553957 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 4553917
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 4550321 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 4550262
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 4550261 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 4550207
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 4553804 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 4553745
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 4553744 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 4553685
Query: 793 gcctg 797
|||||
Sbjct: 4553684 gcctg 4553680
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 4508347 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 4508288
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 4508287 gcagctttgcgttttcttctccttatcacaaagaatgcaa 4508248
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 4551456 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 4551397
Query: 1842 aacattc 1848
|||||||
Sbjct: 4551396 aacattc 4551390
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 4508059 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 4508000
Query: 1842 aacattc 1848
|||||||
Sbjct: 4507999 aacattc 4507993
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 4551160 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 4551101
Query: 1981 agatcc 1986
||||||
Sbjct: 4551100 agatcc 4551095
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 4551285 gacattgatataaccagtaaattgattgttctgca 4551251
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 4550958 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 4550906
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 4552033 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 4551974
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 4551973 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 4551914
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 4550811 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 4550764
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 4550653 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 4550594
Query: 2195 ggctcat 2201
|||||||
Sbjct: 4550593 ggctcat 4550587
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 4507886 gacattgatataaccagtaaatttattgttctgca 4507852
Score = 46.1 bits (23), Expect = 0.098
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 697 agcatgacaactccaaagctgtaaacatcactctt 731
|||||||| |||||||| ||||| |||||||||||
Sbjct: 16536180 agcatgacgactccaaaactgtacacatcactctt 16536214
Score = 46.1 bits (23), Expect = 0.098
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 697 agcatgacaactccaaagctgtaaacatcactctt 731
|||||||| |||||||| ||||| |||||||||||
Sbjct: 16535637 agcatgacgactccaaaactgtacacatcactctt 16535671
Score = 44.1 bits (22), Expect = 0.39
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 472 acctctgacattggtggcctgaattctggttcaggctg 509
||||| ||||| |||||||||||||| || ||||||||
Sbjct: 16535186 acctccgacatcggtggcctgaattccggctcaggctg 16535223
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Minus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 4382964 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 4382905
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 4382904 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 4382845
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 4382844 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 4382785
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 4382784 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 4382725
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 4382724 atcacggtactatcaagtttcttcacggccagaacct 4382688
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 4381976 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 4381917
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 4381916 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 4381857
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4381856 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 4381797
Query: 1672 ga 1673
||
Sbjct: 4381796 ga 4381795
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383547 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 4383488
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 4383487 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 4383428
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 4383427 aaatttcatgaag 4383415
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 4382357 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 4382298
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382297 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 4382238
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 4382237 tttataggtg 4382228
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4384437 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 4384378
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384377 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 4384331
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 4384234 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 4384175
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 4384174 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 4384115
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 4384114 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 4384074
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 4380477 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 4380418
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 4380417 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 4380363
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 4383961 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 4383902
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 4383901 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 4383842
Query: 793 gcctg 797
|||||
Sbjct: 4383841 gcctg 4383837
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 4339631 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 4339572
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 4339571 gcagctttgcgttttcttctccttatcacaaagaatgcaa 4339532
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 4381613 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 4381554
Query: 1842 aacattc 1848
|||||||
Sbjct: 4381553 aacattc 4381547
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 4339343 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 4339284
Query: 1842 aacattc 1848
|||||||
Sbjct: 4339283 aacattc 4339277
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 4381316 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 4381257
Query: 1981 agatcc 1986
||||||
Sbjct: 4381256 agatcc 4381251
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 4381442 gacattgatataaccagtaaattgattgttctgca 4381408
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 4381114 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 4381062
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 4382190 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 4382131
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 4382130 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 4382071
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 4380967 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 4380920
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 4380809 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 4380750
Query: 2195 ggctcat 2201
|||||||
Sbjct: 4380749 ggctcat 4380743
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 4339170 gacattgatataaccagtaaatttattgttctgca 4339136
Score = 46.1 bits (23), Expect = 0.098
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 697 agcatgacaactccaaagctgtaaacatcactctt 731
|||||||| |||||||| ||||| |||||||||||
Sbjct: 15906407 agcatgacgactccaaaactgtacacatcactctt 15906441
Score = 44.1 bits (22), Expect = 0.39
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 472 acctctgacattggtggcctgaattctggttcaggctg 509
||||| ||||| |||||||||||||| || ||||||||
Sbjct: 15905956 acctccgacatcggtggcctgaattccggctcaggctg 15905993
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 335 bits (169), Expect = 7e-089
Identities = 250/277 (90%)
Strand = Plus / Minus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 4382849 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 4382790
Query: 988 ttgctgtactcatctgaaaggtggagtagatcatgaagcgatccattcctgtggaaatca 1047
|||||||| || |||||||| |||||||||||||| || || |||||||||||||||||
Sbjct: 4382789 ttgctgtattcgtctgaaagatggagtagatcatggagtgacccattcctgtggaaatcg 4382730
Query: 1048 tacacaagcaagtgctggccatgttccatgcaatagcctacaagctcattcagattcgga 1107
|| ||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 4382729 taaacaagcaagtgttgcccatgttccatgcaatagcccacaagctcattgagattcgga 4382670
Query: 1108 tggtgcaattttgaaatgttcgagaccagttcagcaaagtcatcagatgattgaaatggc 1167
|| |||| ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 4382669 tgatgcagttttgaaatgtctgagaccagttcagcaaaatcatcagatgaatggaatggc 4382610
Query: 1168 atcacagtactatctaatttcttgatcgccagaacct 1204
||||| |||||||| | |||||| | ||||||||||
Sbjct: 4382609 atcacggtactatcaagtttcttcacggccagaacct 4382573
Score = 202 bits (102), Expect = 7e-049
Identities = 162/182 (89%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 4381861 ttaacttcgtttgaagggaacgaagtgaatggctggtgctgttcaaaatgttcttccaat 4381802
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaacaactgatccaacaaccagc 1611
| ||| |||||||||||||| | |||||||| |||||||| |||| |||||| ||||||
Sbjct: 4381801 gccgctctgcgttttcttcttcttatcacaaagaatgcaacgactgctccaactaccagc 4381742
Query: 1612 aacgatataatgattcctgctacacctccaccacctatcccagatcttccaccagaactt 1671
|| ||||| || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4381741 aatgatatgataatgcctgctacacctccaccacctatcccagagcttccaccagaactt 4381682
Query: 1672 ga 1673
||
Sbjct: 4381681 ga 4381680
Score = 176 bits (89), Expect = 4e-041
Identities = 122/133 (91%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383432 cctggaattctgcatcagaaataaagcttgcaagtccagcatctgaaaggtgtggattga 4383373
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
||||||| ||||| | || || || ||||||||||||||||||||||||||||||||||
Sbjct: 4383372 attctgaatccagtagaaggttggatgacttgaaattcttatggatgatggatggagaac 4383313
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 4383312 aaatttcatgaag 4383300
Score = 170 bits (86), Expect = 2e-039
Identities = 119/130 (91%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 4382242 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 4382183
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382182 ttgtccatgctaaagctttctgttgccatctgtagatctgcaactgaataaacagttgcc 4382123
Query: 1321 ttcataggtg 1330
|| |||||||
Sbjct: 4382122 tttataggtg 4382113
Score = 165 bits (83), Expect = 2e-037
Identities = 101/107 (94%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4384322 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 4384263
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 509
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384262 gcttgcaccacctctgacattggtggcctgaattctggttcaggctg 4384216
Score = 137 bits (69), Expect = 3e-029
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
||||||||||| || || || || ||||| ||||| ||||| || || ||||| |||||
Sbjct: 4384119 ctggacacacaaagcgagcacgtcggcaaaccgggagagagacttggcagggtacagacc 4384060
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
||| || |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 4384059 cttcagcgcaggatcgaccattctgtccaatgcatcgatgtcatggagctgtggagtcgc 4384000
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctgt 667
|||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 4383999 ccaccgcacaagtgactgctctgacctcggtctagtgctgt 4383959
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 4380362 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 4380303
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 4380302 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 4380248
Score = 97.6 bits (49), Expect = 3e-017
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 673 ggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactcttg 732
||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 4383846 ggtctgcgtcccgtcaaaagctctagcatgactactccaaagctgtagacatcgctcttc 4383787
Query: 733 aaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttctgct 792
| ||||||||||| ||||||||||| |||||||||||| | || ||||| |||| |||
Sbjct: 4383786 agtgtgtactgaccagtcatgtccacctctggggcagtgcacccagcactctgttgcgct 4383727
Query: 793 gcctg 797
|||||
Sbjct: 4383726 gcctg 4383722
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 4339516 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 4339457
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 4339456 gcagctttgcgttttcttctccttatcacaaagaatgcaa 4339417
Score = 93.7 bits (47), Expect = 5e-016
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |
Sbjct: 4381498 ctgtagattgtttatcttcttaagttgactaggaatccagccagtgaaatgattgtttgc 4381439
Query: 1842 aacattc 1848
|||||||
Sbjct: 4381438 aacattc 4381432
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 4339228 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 4339169
Query: 1842 aacattc 1848
|||||||
Sbjct: 4339168 aacattc 4339162
Score = 67.9 bits (34), Expect = 3e-008
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 1921 ttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaaggag 1980
||||||||||||||| ||||| | ||||||||| ||||||| |||||||||||||||
Sbjct: 4381201 ttcaggcttgacaatgatgtgaacccttgtggtaggtcaccagcaagagaattaaaggaa 4381142
Query: 1981 agatcc 1986
||||||
Sbjct: 4381141 agatcc 4381136
Score = 61.9 bits (31), Expect = 2e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
|||||||||||||||||||||||| ||||||||||
Sbjct: 4381327 gacattgatataaccagtaaattgattgttctgca 4381293
Score = 58.0 bits (29), Expect = 3e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1999 ctataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgatt 2051
||||| ||| |||||||||||||||| || |||||||| | ||||||||||||
Sbjct: 4380999 ctatagaggctggaaaatacatcagttatatttccttgcaattggttatgatt 4380947
Score = 56.0 bits (28), Expect = 1e-004
Identities = 97/120 (80%)
Strand = Plus / Minus
Query: 1371 atcatcatcatcaaatgatttgttctgttctatcttcgggggtggtttcagattaatcga 1430
|||||||||||| || || |||| |||| ||||| |||||||| |||||| ||| ||
Sbjct: 4382075 atcatcatcatcgaaagacttgtggcgttcaatcttggggggtggcttcagactaaatga 4382016
Query: 1431 agcaggtgaagccaaagactctatgtctactgtggtggactcatagataggcttcatgtc 1490
|||||| || | ||||||||||| |||| ||| || ||||| | ||||||||||||||
Sbjct: 4382015 agcaggggatggcaaagactctacatctattgtagtagactcttcaataggcttcatgtc 4381956
Score = 56.0 bits (28), Expect = 1e-004
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 2059 aaatacttaagattaggcatcgtcgaaattgagtagggtaaatttcca 2106
|||||||||||||||| ||||| |||| ||||||||||||||||||
Sbjct: 4380852 aaatacttaagattagacatcgagaaaatcgagtagggtaaatttcca 4380805
Score = 54.0 bits (27), Expect = 4e-004
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
|||||||||| || ||||||||||||||||||| || ||||| |||||||| ||||
Sbjct: 4380694 tctcaagcttattagtgggaagattgtactgtatctgttggccaccaccaaggttgtttt 4380635
Query: 2195 ggctcat 2201
|||||||
Sbjct: 4380634 ggctcat 4380628
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 4339055 gacattgatataaccagtaaatttattgttctgca 4339021
Score = 46.1 bits (23), Expect = 0.098
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 697 agcatgacaactccaaagctgtaaacatcactctt 731
|||||||| |||||||| ||||| |||||||||||
Sbjct: 15911873 agcatgacgactccaaaactgtacacatcactctt 15911907
Score = 44.1 bits (22), Expect = 0.39
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 472 acctctgacattggtggcctgaattctggttcaggctg 509
||||| ||||| |||||||||||||| || ||||||||
Sbjct: 15911422 acctccgacatcggtggcctgaattccggctcaggctg 15911459
>gb|C22508.1|C22508 C22508 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0829_2A, mRNA sequence
Length = 463
Score = 295 bits (149), Expect = 6e-077
Identities = 382/459 (83%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
|||||||| |||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 460 gtcatgttngccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 401
Query: 490 ctgaattctggttcaggctggacacacagggcaaggacatcagc-aaatcgggatagaga 548
||||| || || ||||||||||||||||| |||| ||| || || || ||||| || ||
Sbjct: 400 ctgaactccggctcaggctggacacacagcgcaatgacgtctgcgnaaacgggacaggga 341
Query: 549 tttagctgggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtc 608
||| || ||||| || |||||||| || || |||||||||| |||||| || ||||||||
Sbjct: 340 tttggcagggtacaggcccttgagcgctgggtcgaccatccggtccaacgcatcgatgtc 281
Query: 609 atgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtc 668
|||||||||||| ||||||||||| ||||||||||| |||| || | |||||| ||||||
Sbjct: 280 atgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcgctgtc 221
Query: 669 aaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcact 728
||||||| | || |||||||| || || |||||||||||||||||||| |||||||||||
Sbjct: 220 aaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaacatcact 161
Query: 729 cttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgttc 788
||||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || || ||
Sbjct: 160 cttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccctgatc 101
Query: 789 tgctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtgg 848
|| ||||||||||||| | |||||| | ||| |||||||||||||| |||| || ||
Sbjct: 100 tgaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgagg 41
Query: 849 attgaattctgagtccagcaaaatatttgacgacttgaa 887
|||||| || | ||||||||| ||||| || ||||||||
Sbjct: 40 attgaactcggtgtccagcaagatattagatgacttgaa 2
>gb|C22572.1|C22572 C22572 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40620_2A, mRNA sequence
Length = 463
Score = 272 bits (137), Expect = 9e-070
Identities = 383/461 (83%), Gaps = 3/461 (0%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 462 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 403
Query: 490 ctgaattctggttcaggctggacacacagggc-aaggacatcagcaaatcgggat-agag 547
||||| || || ||||||||||||||||| || || ||| || || || ||||| || |
Sbjct: 402 ctgaactccggctcaggctggacacacagcgccaatgacgtctgcgaaacgggaccaggg 343
Query: 548 atttagct-gggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatg 606
|||| || ||||| || |||||||| || || |||||||||| |||||| || ||||||
Sbjct: 342 atttggccagggtacaggcccttgagcgctgggtcgaccatccggtccaacgcatcgatg 283
Query: 607 tcatgcagctggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||||||||||| ||||||||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 282 tcatgcagctggggcgttgcccaccggacaagtgactgctctgtccggagtctagcgctg 223
Query: 667 tcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatca 726
||||||||| | || |||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 222 tcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaacatca 163
Query: 727 ctcttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttgt 786
||||||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || ||
Sbjct: 162 ctcttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccctga 103
Query: 787 tctgctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgt 846
|||| ||||||||||||| | |||||| | ||| |||||||||||||| |||| ||
Sbjct: 102 tctgaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatga 43
Query: 847 ggattgaattctgagtccagcaaaatatttgacgacttgaa 887
|||||||| || | ||||||||| ||||| || ||||||||
Sbjct: 42 ggattgaactcggtgtccagcaagatattagatgacttgaa 2
>gb|CV722438.1|CV722438 YTPSP--01-D18.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-D18, mRNA
sequence
Length = 512
Score = 260 bits (131), Expect = 3e-066
Identities = 209/235 (88%)
Strand = Plus / Plus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 278 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 337
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 338 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 397
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagacccttgagtgcaggatcg 582
|| || || ||||| ||||| ||||| || || ||||| |||||||| || |||||||||
Sbjct: 398 agcacgtcggcaaaccgggagagagacttggcagggtacagacccttcagcgcaggatcg 457
Query: 583 accatcctgtccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaa 637
||||| ||||||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 458 accattctgtccaatgcatcgatgtcatggagctgtggagtcgcccaccgcacaa 512
>gb|AQ050945.1|AQ050945 nbxb0004dC04r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0004F08r, DNA sequence
Length = 853
Score = 220 bits (111), Expect = 3e-054
Identities = 207/237 (87%), Gaps = 2/237 (0%)
Strand = Plus / Minus
Query: 969 agagttccagctaa-gtggcttgctgtactcatctgaaaggtggagtagatcatgaagcg 1027
|||||||||| ||| ||||||||||||| || |||||||| || |||||||||| || |
Sbjct: 631 agagttccagttaaagtggcttgctgtattcgtctgaaagatgangtagatcatggagtg 572
Query: 1028 atccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagccta 1087
| ||||||||||||||||| || ||||||||||| || ||||||||||||| |||||| |
Sbjct: 571 acccattcctgtggaaatcgta-acaagcaagtgttgcccatgttccatgcnatagccca 513
Query: 1088 caagctcattcagattcggatggtgcaattttgaaatgttcgagaccagttcagcaaagt 1147
|||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||| |
Sbjct: 512 caagctcattgagattcggatgatgcagttttgaaatgtctgagaccagttcagcaaaat 453
Query: 1148 catcagatgattgaaatggcatcacagtactatctaatttcttgatcgccagaacct 1204
|||||||||| || ||||||||||| |||||||| | |||||| | ||||||||||
Sbjct: 452 catcagatgaatggaatggcatcacggtactatcaagtttcttcacggccagaacct 396
Score = 73.8 bits (37), Expect = 4e-010
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
||||||||| || | || ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 65 acctttccaccagtaaactgtgccctgtatacacgtccaaaagtaccttccccaacaagg 6
Query: 1261 ttgtc 1265
|||||
Sbjct: 5 ttgtc 1
>gb|C73929.1|C73929 C73929 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E21126_1A, mRNA sequence
Length = 386
Score = 212 bits (107), Expect = 7e-052
Identities = 197/227 (86%)
Strand = Plus / Minus
Query: 1762 ctccaagaatttccgtcggtctgtagattgtttatcttcttaagctgactgggaatccaa 1821
||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 255 ctccaagaatttccgtcagtttgtagattgtttatcttcttaagttgactaggaatccag 196
Query: 1822 ccagtgaaatggttgtttccaacattcagggtttcaaggggaaggttggctaagacattg 1881
||||||||||| |||||| |||||||||| |||||||| || || || | |||||||
Sbjct: 195 ccagtgaaatgattgtttgcaacattcagatcatcaagggggagattagcaaggacattg 136
Query: 1882 atataaccagtaaattggttgttctgcaaatacattcttttcaggcttgacaatccagtg 1941
||||||||||||||||| |||||||||| ||| | | | ||||||||||||||| |||
Sbjct: 135 atataaccagtaaattgattgttctgcagatataatttcttcaggcttgacaatgatgtg 76
Query: 1942 aaactttgtggtagatcaccagtaagagaattaaaggagagatccag 1988
|| | ||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 75 aacccttgtggtaggtcaccagcaagagaattaaaggaaagatccag 29
>gb|AU064258.2|AU064258 AU064258 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20417_1A, mRNA sequence
Length = 647
Score = 208 bits (105), Expect = 1e-050
Identities = 283/342 (82%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgcaaatacattcttttcagg-cttgaca 1933
||||||||| | |||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct: 642 gacattgattgatccagtaaattggttgttctgcagatacaaagttttcagggcttgaca 583
Query: 1934 atccagtgaaactttgtggtagatcaccagtaagagaattaaaggagagatccagctctg 1993
||||||||||||| ||||||||||||||| || ||||||||||| || ||
Sbjct: 582 gaganttgaaactttgtggggaatcaccagtaagagantttaaggagagatcaagtgttg 523
Query: 1994 acaaactataaaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaa 2053
| ||||| |||||||||||| ||||| || || |||||||||| |||||| |||||||
Sbjct: 522 ataaacttggaaggttggaaaagacatctgtcatatttccttgtaattggttntgattaa 463
Query: 2054 ggtttaaatacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaatt 2113
|||||| ||||||||| |||||||| || ||||||||||| || | ||||||| |||| |
Sbjct: 462 ggtttagatacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaact 403
Query: 2114 gatttcctgcaagattgagtttctcaagcttcatattgggaagattgtactgtatttgac 2173
| || || ||||||||||| ||||||||||| |||| ||||||||||| || || |
Sbjct: 402 ggttcccagcaagattgagcctctcaagcttcttatttggaagattgtattgaatatttt 343
Query: 2174 ctccaccgccaaggttattttggctcatgtcaagctcaacta 2215
||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 342 ggccacccccaagattattttggctcatgtcaagctcaacta 301
>gb|AU095237.1|AU095237 AU095237 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60857, mRNA sequence
Length = 471
Score = 188 bits (95), Expect = 1e-044
Identities = 149/167 (89%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 173 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 114
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 113 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 54
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagaccctt 569
|| || || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 53 agcacgtcggcaaaccgggagagagacttggcagggtacagaccctt 7
>gb|AU091393.1|AU091393 AU091393 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50386, mRNA sequence
Length = 469
Score = 186 bits (94), Expect = 4e-044
Identities = 148/166 (89%)
Strand = Plus / Minus
Query: 403 gaagtatccccatcaagcatcctcttcgtcatgttggccctctgcacaagtcgaaccaat 462
|||||||| || || ||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 166 gaagtatctccgtcgagcattctcttcgtcatgttggccctctggacaagacgaaccaat 107
Query: 463 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacagggca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 106 gcttgcaccacctctgacattggtggcctgaattctggttcaggctggacacacaaagcg 47
Query: 523 aggacatcagcaaatcgggatagagatttagctgggtatagaccct 568
|| || || ||||| ||||| ||||| || || ||||| |||||||
Sbjct: 46 agcacgtcggcaaaccgggagagagacttggcagggtacagaccct 1
>gb|AACV01021458.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021458, whole
genome shotgun sequence
Length = 20172
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5520 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 5579
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5580 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 5639
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 5640 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 5698
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 4906 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 4965
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 4966 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 5025
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 5026 cacaagctcattgagattgggatggtgcaactttgaaatgtt 5067
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 3930 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 3989
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 3990 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 4049
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 4050 ccaccggacaagtgactgctctgtccggagtctagcgctg 4089
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 4198 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 4257
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 4258 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 4302
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 4509 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 4568
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 4569 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 4628
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 4629 aaatttcatgaag 4641
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 6569 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 6628
Query: 1979 agagatc 1985
|||||||
Sbjct: 6629 agagatc 6635
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 6790 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 6844
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 3753 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 3812
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 3813 ctgaactccggctcaggctg 3832
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 6933 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 6992
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 6993 agcaagattg 7002
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 6433 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 6489
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 6286 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 6341
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 7129 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 7188
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 7189 ggctcatgtca 7199
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 5904 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 5958
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 6141 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 6200
Query: 1780 gt 1781
||
Sbjct: 6201 gt 6202
>ref|NT_080066.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1531814
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726665 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 726724
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 726725 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 726784
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 726785 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 726843
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 726051 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 726110
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 726111 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 726170
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 726171 cacaagctcattgagattgggatggtgcaactttgaaatgtt 726212
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 725075 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 725134
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 725135 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 725194
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 725195 ccaccggacaagtgactgctctgtccggagtctagcgctg 725234
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 725343 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 725402
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 725403 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 725447
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 725654 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 725713
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 725714 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 725773
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 725774 aaatttcatgaag 725786
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 727714 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 727773
Query: 1979 agagatc 1985
|||||||
Sbjct: 727774 agagatc 727780
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 727935 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 727989
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 724898 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 724957
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 724958 ctgaactccggctcaggctg 724977
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 728078 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 728137
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 728138 agcaagattg 728147
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 727578 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 727634
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 727431 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 727486
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 728274 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 728333
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 728334 ggctcatgtca 728344
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 727049 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 727103
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 727286 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 727345
Query: 1780 gt 1781
||
Sbjct: 727346 gt 727347
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091
genomic scaffold, whole genome shotgun sequence
Length = 10615099
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644435 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 644494
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 644495 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 644554
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 644555 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 644613
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 643821 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 643880
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 643881 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 643940
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 643941 cacaagctcattgagattgggatggtgcaactttgaaatgtt 643982
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 642845 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 642904
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 642905 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 642964
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 642965 ccaccggacaagtgactgctctgtccggagtctagcgctg 643004
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 643113 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 643172
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 643173 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 643217
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 643424 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 643483
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 643484 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 643543
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 643544 aaatttcatgaag 643556
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 645484 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 645543
Query: 1979 agagatc 1985
|||||||
Sbjct: 645544 agagatc 645550
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 645705 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 645759
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 642668 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 642727
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 642728 ctgaactccggctcaggctg 642747
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 645848 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 645907
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 645908 agcaagattg 645917
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 645348 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 645404
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 645201 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 645256
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 646044 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 646103
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 646104 ggctcatgtca 646114
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 644819 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 644873
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 645056 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 645115
Query: 1780 gt 1781
||
Sbjct: 645116 gt 645117
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11510229 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 11510288
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 11510289 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 11510348
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 11510349 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 11510407
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 11509615 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 11509674
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 11509675 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 11509734
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 11509735 cacaagctcattgagattgggatggtgcaactttgaaatgtt 11509776
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 11508639 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 11508698
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 11508699 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 11508758
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 11508759 ccaccggacaagtgactgctctgtccggagtctagcgctg 11508798
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 11508907 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 11508966
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 11508967 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 11509011
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 11509218 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 11509277
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 11509278 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 11509337
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 11509338 aaatttcatgaag 11509350
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 11511278 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 11511337
Query: 1979 agagatc 1985
|||||||
Sbjct: 11511338 agagatc 11511344
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 11511499 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 11511553
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 11508462 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 11508521
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 11508522 ctgaactccggctcaggctg 11508541
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 11511642 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 11511701
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 11511702 agcaagattg 11511711
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 11511142 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 11511198
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 11510995 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 11511050
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 11511838 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 11511897
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 11511898 ggctcatgtca 11511908
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 11510613 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 11510667
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 11510850 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 11510909
Query: 1780 gt 1781
||
Sbjct: 11510910 gt 11510911
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12408602 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 12408661
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 12408662 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 12408721
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 12408722 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 12408780
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 12407988 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 12408047
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 12408048 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 12408107
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 12408108 cacaagctcattgagattgggatggtgcaactttgaaatgtt 12408149
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 12407012 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 12407071
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 12407072 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 12407131
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 12407132 ccaccggacaagtgactgctctgtccggagtctagcgctg 12407171
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 12407280 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 12407339
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 12407340 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 12407384
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 12407591 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 12407650
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 12407651 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 12407710
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 12407711 aaatttcatgaag 12407723
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 12409651 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 12409710
Query: 1979 agagatc 1985
|||||||
Sbjct: 12409711 agagatc 12409717
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 12409872 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 12409926
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 12406835 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 12406894
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 12406895 ctgaactccggctcaggctg 12406914
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 12410015 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 12410074
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 12410075 agcaagattg 12410084
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 12409515 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 12409571
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 12409368 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 12409423
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 12410211 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 12410270
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 12410271 ggctcatgtca 12410281
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 12408986 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 12409040
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 12409223 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 12409282
Query: 1780 gt 1781
||
Sbjct: 12409283 gt 12409284
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
OSJNBb0061I18, complete sequence
Length = 143163
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Minus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95573 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 95514
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 95513 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 95454
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 95453 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 95395
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Minus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 96187 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 96128
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 96127 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 96068
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 96067 cacaagctcattgagattgggatggtgcaactttgaaatgtt 96026
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Minus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 97163 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 97104
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 97103 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 97044
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 97043 ccaccggacaagtgactgctctgtccggagtctagcgctg 97004
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Minus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 96895 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 96836
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 96835 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 96791
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 96584 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 96525
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 96524 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 96465
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 96464 aaatttcatgaag 96452
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 94524 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 94465
Query: 1979 agagatc 1985
|||||||
Sbjct: 94464 agagatc 94458
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 94303 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 94249
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 97340 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 97281
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 97280 ctgaactccggctcaggctg 97261
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 94160 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 94101
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 94100 agcaagattg 94091
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 94660 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 94604
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 94807 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 94752
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 95189 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 95135
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 93964 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 93905
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 93904 ggctcatgtca 93894
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 94952 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 94893
Query: 1780 gt 1781
||
Sbjct: 94892 gt 94891
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 180 bits (91), Expect = 3e-042
Identities = 157/179 (87%)
Strand = Plus / Plus
Query: 1201 acctttccatcattgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaagg 1260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12415942 acctttccatcactgaattgtgccctgtaaacacgtccaaaagtaccctctccaacaaga 12416001
Query: 1261 ttgtcgaagctaaagctatctgttgccatctgtagatctgcaactgaataaacagttgcc 1320
||||| | | | || |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 12416002 ttgtccatgttgaaactatctgttgccatctgtaggtctgcaactgaataaactgttgct 12416061
Query: 1321 ttcataggtgttatattacttctatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
|| | | || | ||||||| | |||||| ||| |||||||||||| |||||||||||
Sbjct: 12416062 tttactgatgctgaattacttttctttgcaacaggcttgtttgaaaagtcatcatcatc 12416120
Score = 155 bits (78), Expect = 1e-034
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 966 acgagagttccagctaagtggcttgctgtactcatctgaaaggtggagtagatcatgaag 1025
|||||| |||||||| ||||| ||||| || ||||||| ||||| || | |||||| ||
Sbjct: 12415328 acgagaattccagctgagtggtttgctatattcatctgggaggtgaagcatatcatgcag 12415387
Query: 1026 cgatccattcctgtggaaatcatacacaagcaagtgctggccatgttccatgcaatagcc 1085
||| ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 12415388 cgaaccatttctgtggaaatcataaactagcaagtgctgtccatgctccatgcaatagcc 12415447
Query: 1086 tacaagctcattcagattcggatggtgcaattttgaaatgtt 1127
||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 12415448 cacaagctcattgagattgggatggtgcaactttgaaatgtt 12415489
Score = 119 bits (60), Expect = 8e-024
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 507 ctggacacacagggcaaggacatcagcaaatcgggatagagatttagctgggtatagacc 566
|||||||||||| |||| ||| || || || ||||| || ||||| || ||||| || ||
Sbjct: 12414352 ctggacacacagcgcaatgacgtctgcgaaacgggacagggatttggcagggtacaggcc 12414411
Query: 567 cttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagctggggtgttgc 626
|||||| || || |||||||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 12414412 cttgagcgctgggtcgaccatccggtccaacgcatcgatgtcatgcagctggggcgttgc 12414471
Query: 627 ccaccgcacaagtgactgttctgacctgggtctagagctg 666
|||||| ||||||||||| |||| || | |||||| ||||
Sbjct: 12414472 ccaccggacaagtgactgctctgtccggagtctagcgctg 12414511
Score = 105 bits (53), Expect = 1e-019
Identities = 92/105 (87%)
Strand = Plus / Plus
Query: 664 ctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaaca 723
|||||||||||| | || |||||||| || || |||||||||||||||||||| ||||||
Sbjct: 12414620 ctgtcaaatggtttgcggcctgtcaagagctccagcatgacaactccaaagctataaaca 12414679
Query: 724 tcactcttgaaggtgtactgaccggtcatgtccacttctggggca 768
|||||||||| ||| ||||| || |||||||| ||||| ||||||
Sbjct: 12414680 tcactcttgagggtatactgcccagtcatgtcaacttcaggggca 12414724
Score = 89.7 bits (45), Expect = 7e-015
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 794 cctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtgtggattga 853
|||||||||||| | |||||| | ||| |||||||||||||| |||| || |||||||
Sbjct: 12414931 cctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatgaggattga 12414990
Query: 854 attctgagtccagcaaaatatttgacgacttgaaattcttatggatgatggatggagaac 913
| || | ||||||||| ||||| || |||||||| ||||| ||||| || || |||||||
Sbjct: 12414991 actcggtgtccagcaagatattagatgacttgaagttcttgtggataatagaaggagaac 12415050
Query: 914 atatttcatgaag 926
| |||||||||||
Sbjct: 12415051 aaatttcatgaag 12415063
Score = 85.7 bits (43), Expect = 1e-013
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1919 ttttcaggcttgacaatccagtgaaactttgtggtagatcaccagtaagagaattaaagg 1978
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 12416991 ttttcaggcttgacagagaagtgaaactttgtgggagatcaccagtaagagaatttaagg 12417050
Query: 1979 agagatc 1985
|||||||
Sbjct: 12417051 agagatc 12417057
Score = 69.9 bits (35), Expect = 7e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2004 aaggttggaaaatacatcagtgatgtttccttgtagttggttatgattaaggttt 2058
|||||||||||| ||||| || || |||||||||| |||||||||||||||||||
Sbjct: 12417212 aaggttggaaaagacatctgtcatatttccttgtaattggttatgattaaggttt 12417266
Score = 63.9 bits (32), Expect = 4e-007
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 12414175 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 12414234
Query: 490 ctgaattctggttcaggctg 509
||||| || || ||||||||
Sbjct: 12414235 ctgaactccggctcaggctg 12414254
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 2061 atacttaagattaggcatcgtcgaaattgagtagggtaaatttccaccaaattgatttcc 2120
||||||||| |||||||| || ||||||||||| || | ||||||| |||| || || ||
Sbjct: 12417355 atacttaagtttaggcattgtggaaattgagtatggcacatttccagcaaactggttccc 12417414
Query: 2121 tgcaagattg 2130
|||||||||
Sbjct: 12417415 agcaagattg 12417424
Score = 50.1 bits (25), Expect = 0.006
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1858 aggggaaggttggctaagacattgatataaccagtaaattggttgttctgcaaatac 1914
|||||||| || || | ||||||||| | |||||||||||||||||||||| ||||
Sbjct: 12416855 aggggaagattagcaaggacattgattgatccagtaaattggttgttctgcagatac 12416911
Score = 48.1 bits (24), Expect = 0.025
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 1792 tttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttccaacatt 1847
||||| ||||| |||| | | |||||||||||||| ||| |||||||||| |||||
Sbjct: 12416708 tttattttctttagctcattaggaatccaaccagtaaaacggttgtttcccacatt 12416763
Score = 46.1 bits (23), Expect = 0.098
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 2135 tctcaagcttcatattgggaagattgtactgtatttgacctccaccgccaaggttatttt 2194
||||||||||| |||| ||||||||||| || || | ||||| ||||| |||||||
Sbjct: 12417551 tctcaagcttcttatttggaagattgtattgaatattttggccacccccaagattatttt 12417610
Query: 2195 ggctcatgtca 2205
|||||||||||
Sbjct: 12417611 ggctcatgtca 12417621
Score = 46.1 bits (23), Expect = 0.098
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttctt 1546
||||||||||| |||||| | ||| |||| ||||| ||||||||| ||||||||
Sbjct: 12416326 ttaacttcattggaagggtatgaattgaaaggctgtcgctgttcaacatgttctt 12416380
Score = 44.1 bits (22), Expect = 0.39
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1720 ggaggcgctgtatatggaggtggaggtggcgctggtcctgtgctccaagaatttccgtcg 1779
||||| ||||| |||| ||||| ||||| || || ||||||||||||||||| || |||
Sbjct: 12416563 ggaggtgctgtgaatggtggtggtggtggtgccggacctgtgctccaagaattgccatcg 12416622
Query: 1780 gt 1781
||
Sbjct: 12416623 gt 12416624
>gb|AU029970.1|AU029970 AU029970 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50386_1A, mRNA sequence
Length = 264
Score = 174 bits (88), Expect = 2e-040
Identities = 191/226 (84%)
Strand = Plus / Minus
Query: 533 caaatcgggatagagatttagctgggtatagacccttgagtgcaggatcgaccatcctgt 592
|||| ||||| ||||| || || ||||| |||||||| || |||| ||||||||| ||||
Sbjct: 255 caaaccgggagagagacttggcagggtacagacccttcagcgcagnatcgaccattctgt 196
Query: 593 ccaatgcgtcgatgtcatgcagctggggtgttgcccaccgcacaagtgactgttctgacc 652
||||||| ||||||||||| ||||| || || |||||||||||||||||||| |||||||
Sbjct: 195 ccaatgcatcgatgtcatggagctgtggagtcgcccaccgcacaagtgactgctctgacc 136
Query: 653 tgggtctagagctgtcaaatggtctacgtcctgtcaatagttcaagcatgacaactccaa 712
| ||||||| ||| || || ||||| ||||| ||||| || || |||||||| |||||||
Sbjct: 135 tcggtctagtgctatcgaaaggtctgcgtcccgtcaaaagctctagcatgactactccaa 76
Query: 713 agctgtaaacatcactcttgaaggtgtactgaccggtcatgtccac 758
|| | || ||||| ||||| | ||||||||||| |||||||||||
Sbjct: 75 agntttagacatcgctcttcagtgtgtactgaccagtcatgtccac 30
>gb|CB636014.1|CB636014 OSJNEa01A12.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01A12 5', mRNA sequence
Length = 412
Score = 143 bits (72), Expect = 6e-031
Identities = 150/176 (85%)
Strand = Plus / Minus
Query: 2040 ttggttatgattaaggtttaaatacttaagattaggcatcgtcgaaattgagtagggtaa 2099
|||||||||||||||||||| ||||||||| |||||||| || ||||||||||| || |
Sbjct: 409 ttggttatgattaaggtttagatacttaagtttaggcattgtggaaattgagtatggcac 350
Query: 2100 atttccaccaaattgatttcctgcaagattgagtttctcaagcttcatattgggaagatt 2159
||||||| |||| || || || ||||||||||| ||||||||||| |||| ||||||||
Sbjct: 349 atttccagcaaactggttcccagcaagattgagcctctcaagcttcttatttggaagatt 290
Query: 2160 gtactgtatttgacctccaccgccaaggttattttggctcatgtcaagctcaacta 2215
||| || || | ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 289 gtattgaatattttggccacccccaagattattttggctcatgtcaagctcaacta 234
>gb|AZ132617.1|AZ132617 OSJNBb0107O14r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0107O14r, DNA
sequence
Length = 1167
Score = 141 bits (71), Expect = 2e-030
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 813 aataaagcttgcaagtccagcatctgaaaggtgtggattgaattctgagtccagcaaaat 872
||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||| | ||
Sbjct: 10 aataaagctagcaagtccagcatctganaggtgtggattgtattctgaatccagtagaag 69
Query: 873 atttgacgacttgaaattcttatggatgatggatggagaacatatttcatgaag 926
|| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 70 gttggatgacttgaaattcttatggatgatggatggagaacaaatttcatgaag 123
Score = 127 bits (64), Expect = 3e-026
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 928 tactccagtgcacgggcagagccgagtgcgatcttgatacgagagttccagctaagtggc 987
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 573 tactccagtgcacgggcagagcctagtgcgatcttgacacgagagttccagctaagtggc 632
Query: 988 ttgctgtactcatctgaaaggtggagtagat 1018
|||||||| || ||||||| |||||| |||
Sbjct: 633 ttgctgtattcgcctgaaagatggagtngat 663
>gb|C22550.1|C22550 C22550 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20101_2A, mRNA sequence
Length = 344
Score = 133 bits (67), Expect = 5e-028
Identities = 226/279 (81%)
Strand = Plus / Minus
Query: 725 cactcttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcacttt 784
||||||||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || |
Sbjct: 289 cactcttgagggtatactgcccagtcatgtcaacttcaggggcactatatccagaaccct 230
Query: 785 gttctgctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggt 844
| |||| ||||||||||||| | |||||| | ||| |||||||||||||| |||| |
Sbjct: 229 gatctgaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacat 170
Query: 845 gtggattgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatgg 904
| |||||||| || | ||||||||| ||||| || |||||||| ||||| ||||| || |
Sbjct: 169 gaggattgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataatag 110
Query: 905 atggagaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttga 964
| |||||||| ||||||||||| ||||| ||||| || ||||| || | || ||||| |
Sbjct: 109 aaggagaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatcttaa 50
Query: 965 tacgagagttccagctaagtggcttgctgtactcatctg 1003
|||||| |||||||| ||||| ||||| || |||||||
Sbjct: 49 cacgagaattccagctgagtggtttgctatattcatctg 11
>gb|C22551.1|C22551 C22551 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20101_4Z, mRNA sequence
Length = 291
Score = 133 bits (67), Expect = 5e-028
Identities = 225/278 (80%)
Strand = Plus / Minus
Query: 726 actcttgaaggtgtactgaccggtcatgtccacttctggggcagtgtatccggcactttg 785
|||||||| ||| ||||| || |||||||| ||||| |||||| | ||||| | || ||
Sbjct: 288 actcttgagggtntactgcccagtcatgtcaacttcaggggcactatatccagaaccctg 229
Query: 786 ttctgctgcctggaattcagcaccaggaataaagcttgcaagtccagcatctgaaaggtg 845
|||| ||||||||||||| | |||||| | ||| |||||||||||||| |||| ||
Sbjct: 228 atctgaagcctggaattcagaatcaggaacactgctggcaagtccagcatcagaaacatg 169
Query: 846 tggattgaattctgagtccagcaaaatatttgacgacttgaaattcttatggatgatgga 905
|||||||| || | ||||||||| ||||| || |||||||| ||||| ||||| || ||
Sbjct: 168 aggattgaactcggtgtccagcaagatattagatgacttgaagttcttgtggataataga 109
Query: 906 tggagaacatatttcatgaaggtactccagtgcacgggcagagccgagtgcgatcttgat 965
|||||||| ||||||||||| ||||| ||||| || ||||| || | || ||||| |
Sbjct: 108 aggagaacaaatttcatgaagatactctagtgcccgtgcagaacctaacgcaatcttaac 49
Query: 966 acgagagttccagctaagtggcttgctgtactcatctg 1003
|||||| |||||||| ||||| ||||| || |||||||
Sbjct: 48 acgagaattccagctgagtggtttgctatattcatctg 11
>gb|D39183.1|D39183 RICR2893A Rice root Oryza sativa (japonica cultivar-group) cDNA, mRNA
sequence
Length = 353
Score = 131 bits (66), Expect = 2e-027
Identities = 135/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 1224 cctgtaaacacgtccaaaagtaccctctccaacaaggttgtcgaa-gctaaagctatctg 1282
|||||||||||||||||||||||||||||||||||| ||||| || | | || |||||||
Sbjct: 353 cctgtaaacacgtccaaaagtaccctctccaacaagattgtccaatgttgaaactatctg 294
Query: 1283 ttgccatctgtagatctgcaactgaataaacagttgccttcataggtgttatattacttc 1342
||||||||||||| ||||||||||||||||| ||||| || | | || | |||||||
Sbjct: 293 ttgccatctgtaggtctgcaactgaataaactgttgcttttactgatgctgaattacttt 234
Query: 1343 tatttgcagcagtcttgtttgaaaaatcatcatcatc 1379
| |||||| ||| |||||||||| | |||||||||||
Sbjct: 233 tctttgcaacaggcttgtttgaanagtcatcatcatc 197
>gb|AU065234.2|AU065234 AU065234 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60857_1A,
mRNA sequence
Length = 475
Score = 119 bits (60), Expect = 8e-024
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 411 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 352
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggacattaag 2411
|||| || |||||||||| ||||||||||| || ||||||||||||||||||||| |||
Sbjct: 351 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggacagtaac 292
Query: 2412 atcgttggggtcagtgtccgcagc 2435
||| || ||||| ||||| |||||
Sbjct: 291 atcattagggtcggtgtctgcagc 268
>gb|CB640622.1|CB640622 OSJNEa15K08.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa15K08 5', mRNA sequence
Length = 473
Score = 111 bits (56), Expect = 2e-021
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
||||| |||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 437 tgatcttgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 378
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggacattaag 2411
|||| || |||||||||| ||||||||||| || ||||||||||||||||||||| |||
Sbjct: 377 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggacagtaac 318
Query: 2412 atcgttggggtcagtgtccgcagc 2435
||| || ||||| ||||| |||||
Sbjct: 317 atcattagggtcggtgtctgcagc 294
>gb|AQ257069.1|AQ257069 nbxb0017O24f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0017O24f, DNA sequence
Length = 645
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 323 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 382
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 383 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 437
Score = 48.1 bits (24), Expect = 0.025
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 2150 tgggaagattgtactgtatttgacctccaccgccaaggttattttggctcat 2201
||||||||||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 6 tgggaagattgtactgtatctgttggccaccaccaaggttgttttggctcat 57
>gb|AQ290180.1|AQ290180 nbxb0036O14r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0036O14r, DNA sequence
Length = 607
Score = 109 bits (55), Expect = 8e-021
Identities = 100/115 (86%)
Strand = Plus / Plus
Query: 2292 tgatcctgagcaagtaatgcccttccatgactggccacaaggatcacccccattcgcctg 2351
|||||||||||| || || |||| |||||| ||||||||||| || || ||| | |||||
Sbjct: 115 tgatcctgagcacgtgataccctgccatgattggccacaagggtctccaccacttgcctg 174
Query: 2352 ccaagctctgagctgcccaggagaattcagactggtgaagagcgtattgaggaca 2406
|||| || |||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 175 ccaacctttgagctgccccggagaattcaggctagtgaagagcgtattgaggaca 229
>gb|C22573.1|C22573 C22573 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40620_3Z, mRNA sequence
Length = 460
Score = 109 bits (55), Expect = 8e-021
Identities = 139/167 (83%)
Strand = Plus / Minus
Query: 430 gtcatgttggccctctgcacaagtcgaaccaatgcttgcaccacctctgacattggtggc 489
||||||||||||||||| ||||| || |||| |||||||||||||| ||||| || ||
Sbjct: 174 gtcatgttggccctctgaacaaggcggaccagcgcttgcaccacctcagacatcggcggt 115
Query: 490 ctgaattctggttcaggctggacacacagggcaaggacatcagcaaatcgggatagagat 549
||||| || || ||||||||||||||||| |||| ||| || || || ||||| || |||
Sbjct: 114 ctgaactccggctcaggctggacacacagcgcaatgacgtctgcgaaacgggacagggat 55
Query: 550 ttagctgggtatagacccttgagtgcaggatcgaccatcctgtccaa 596
|| || ||||| || |||||||| || || |||||||||| ||||||
Sbjct: 54 ttggcagggtacaggcccttgagcgctgggtcgaccatccggtccaa 8
>gb|AACV01005994.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005994, whole
genome shotgun sequence
Length = 46137
Score = 95.6 bits (48), Expect = 1e-016
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 1492 ttaacttcatttgaagggaaggaagtgaacggctgatgctgttcaaaatgttcttccata 1551
|||||||| ||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct: 22959 ttaacttcgtttgaagggaatgaggtgaatggttgctgctgttcaaagtgttcttccatt 22900
Query: 1552 acagctttgcgttttcttcttttgatcacaaaaaatgcaa 1591
||||||||||||||||||| | |||||||| |||||||
Sbjct: 22899 gcagctttgcgttttcttctccttatcacaaagaatgcaa 22860
Score = 69.9 bits (35), Expect = 7e-009
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1782 ctgtagattgtttatcttcttaagctgactgggaatccaaccagtgaaatggttgtttcc 1841
|||||||||||||| |||||||| ||||| |||||||| ||||||||||| || ||| |
Sbjct: 22671 ctgtagattgtttaacttcttaatttgactaggaatccagccagtgaaatgattttttgc 22612
Query: 1842 aacattc 1848
|||||||
Sbjct: 22611 aacattc 22605
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 1875 gacattgatataaccagtaaattggttgttctgca 1909
||||||||||||||||||||||| ||||||||||
Sbjct: 22498 gacattgatataaccagtaaatttattgttctgca 22464
>dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154F15, full
insert sequence
Length = 2732
Score = 87.7 bits (44), Expect = 3e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 556 gggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagc 615
||||| || |||| ||||||||| ||||||||| |||||| ||||||||||| ||||||
Sbjct: 2265 gggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcagc 2206
Query: 616 tggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtcaaatggt 675
||||| |||||||||| || |||||||| || |||| || | || |||||||| |||
Sbjct: 2205 tggggagttgcccacccgaccagtgactgctccgaccgtggccgggatctgtcaaaaggt 2146
Query: 676 ctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
| || || |||| || || ||||||||||| || |||||||| || ||||||||
Sbjct: 2145 ttccggccagtcaggagctctagcatgacaacaccgaagctgtacacgtcactctt 2090
>dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061M23, full
insert sequence
Length = 3008
Score = 87.7 bits (44), Expect = 3e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 556 gggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagc 615
||||| || |||| ||||||||| ||||||||| |||||| ||||||||||| ||||||
Sbjct: 2570 gggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcagc 2511
Query: 616 tggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtcaaatggt 675
||||| |||||||||| || |||||||| || |||| || | || |||||||| |||
Sbjct: 2510 tggggagttgcccacccgaccagtgactgctccgaccgtggccgggacctgtcaaaaggt 2451
Query: 676 ctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
| || || |||| || || ||||||||||| || |||||||| || ||||||||
Sbjct: 2450 ttccggccagtcaggagctctagcatgacaacaccgaagctgtacacgtcactctt 2395
>ref|NM_189831.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2163
Score = 87.7 bits (44), Expect = 3e-014
Identities = 143/176 (81%)
Strand = Plus / Minus
Query: 556 gggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagc 615
||||| || |||| ||||||||| ||||||||| |||||| ||||||||||| ||||||
Sbjct: 1967 gggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcagc 1908
Query: 616 tggggtgttgcccaccgcacaagtgactgttctgacctgggtctagagctgtcaaatggt 675
||||| |||||||||| || |||||||| || |||| || | || |||||||| |||
Sbjct: 1907 tggggagttgcccacccgaccagtgactgctccgaccgtggccgggatctgtcaaaaggt 1848
Query: 676 ctacgtcctgtcaatagttcaagcatgacaactccaaagctgtaaacatcactctt 731
| || || |||| || || ||||||||||| || |||||||| || ||||||||
Sbjct: 1847 ttccggccagtcaggagctctagcatgacaacaccgaagctgtacacgtcactctt 1792
>dbj|AB157387.1| Oryza sativa (japonica cultivar-group) DNA, clone:T28720T, 3'
flanking sequence of Tos17 insertion in rice strain
NG1095, genomic survey sequence
Length = 491
Score = 81.8 bits (41), Expect = 2e-012
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 556 gggtatagacccttgagtgcaggatcgaccatcctgtccaatgcgtcgatgtcatgcagc 615
||||| || |||| ||||||||| ||||||||| |||||| ||||||||||| ||||||
Sbjct: 105 gggtacagcccctggagtgcagggtcgaccatctggtccaaagcgtcgatgtcgtgcagc 46
Query: 616 tggggtgttgcccaccgcacaagtgactg 644
||||| |||||||||| || ||||||||
Sbjct: 45 tggggagttgcccacccgaccagtgactg 17
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,522,740
Number of Sequences: 438736
Number of extensions: 4522740
Number of successful extensions: 17366
Number of sequences better than 0.5: 249
Number of HSP's better than 0.5 without gapping: 285
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14097
Number of HSP's gapped (non-prelim): 3229
length of query: 2639
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2617
effective length of database: 2,790,767,724
effective search space: 7303439133708
effective search space used: 7303439133708
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)