BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU057606.1|AU057606 AU057606 Oryza sativa mature leaf Ni... 242 2e-061
gb|AU089749.1|AU089749 AU089749 Rice green shoot Oryza sati... 242 2e-061
gb|AU063651.2|AU063651 AU063651 Rice callus Oryza sativa (j... 242 2e-061
gb|AU184031.1|AU184031 AU184031 Rice root Oryza sativa (jap... 242 2e-061
gb|CA998264.1|CA998264 S234E_D03 Rice cold stress germinati... 242 2e-061
gb|CB685007.1|CB685007 OSJNEf15A24.r OSJNEf Oryza sativa (j... 242 2e-061
gb|CF291584.1|CF291584 14ROOT--02-B05.b1 Rice root plasmid ... 242 2e-061
gb|CF297382.1|CF297382 30DGS--08-D13.g1 Rice leaf plasmid c... 242 2e-061
gb|CF299271.1|CF299271 7LEAF--03-D16.b1 Rice leaf plasmid c... 242 2e-061
gb|CF299272.1|CF299272 7LEAF--03-D16.g1 Rice leaf plasmid c... 242 2e-061
gb|CF301585.1|CF301585 7LEAF--06-I03.b1 Rice leaf plasmid c... 242 2e-061
gb|CF313048.1|CF313048 HD--01-A16.b1 OsHDAC1-overexpressing... 242 2e-061
gb|CF313163.1|CF313163 HD--01-D05.g1 OsHDAC1-overexpressing... 242 2e-061
gb|CF314883.1|CF314883 HD--03-J13.g1 OsHDAC1-overexpressing... 242 2e-061
gb|CF316071.1|CF316071 HD--05-D15.b1 OsHDAC1-overexpressing... 242 2e-061
gb|CF318793.1|CF318793 HD--09-B01.g1 OsHDAC1-overexpressing... 242 2e-061
gb|CF319373.1|CF319373 HD--09-N16.b1 OsHDAC1-overexpressing... 242 2e-061
gb|CF319852.1|CF319852 HD--10-I05.g1 OsHDAC1-overexpressing... 242 2e-061
gb|CV727924.1|CV727924 14Salt--06-F07.g1 Salt treated rice ... 242 2e-061
dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA... 242 2e-061
ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA 242 2e-061
gb|CF297381.1|CF297381 30DGS--08-D13.b1 Rice leaf plasmid c... 240 7e-061
gb|AU092977.1|AU092977 AU092977 Rice callus Oryza sativa (j... 238 3e-060
gb|AU165708.1|AU165708 AU165708 Rice panicle at flowering s... 236 1e-059
gb|CB685006.1|CB685006 OSJNEf15A24.f OSJNEf Oryza sativa (j... 234 5e-059
gb|CF299912.1|CF299912 7LEAF--04-B22.g1 Rice leaf plasmid c... 234 5e-059
gb|CF307286.1|CF307286 HDA1--06-E10.g1 OsHDAC1-overexpressi... 234 5e-059
gb|CF317073.1|CF317073 HD--06-K03.b1 OsHDAC1-overexpressing... 234 5e-059
gb|CF317074.1|CF317074 HD--06-K03.g1 OsHDAC1-overexpressing... 234 5e-059
gb|CF318792.1|CF318792 HD--09-B01.b1 OsHDAC1-overexpressing... 234 5e-059
gb|CF319374.1|CF319374 HD--09-N16.g1 OsHDAC1-overexpressing... 230 7e-058
gb|CF319851.1|CF319851 HD--10-I05.b1 OsHDAC1-overexpressing... 230 7e-058
gb|D38916.1|D38916 RICC2472A Rice callus Oryza sativa (japo... 226 1e-056
gb|C74188.1|C74188 C74188 Rice panicle shorter than 3cm Ory... 226 1e-056
gb|AU057759.1|AU057759 AU057759 Oryza sativa mature leaf Ni... 226 1e-056
gb|AU070698.1|AU070698 AU070698 Rice cDNA from young root O... 226 1e-056
gb|AU161116.1|AU161116 AU161116 Rice callus Oryza sativa (j... 226 1e-056
gb|AU164737.1|AU164737 AU164737 Rice cDNA from immature lea... 226 1e-056
gb|AU164741.1|AU164741 AU164741 Rice cDNA from immature lea... 226 1e-056
gb|AU162063.1|AU162063 AU162063 Rice green shoot Oryza sati... 224 4e-056
gb|D38874.1|D38874 RICC1813A Rice callus Oryza sativa (japo... 222 2e-055
gb|D49040.1|D49040 RICS15660A Rice green shoot Oryza sativa... 222 2e-055
gb|CA998263.1|CA998263 S234E_D02 Rice cold stress germinati... 222 2e-055
gb|D38891.1|D38891 RICC2069A Rice callus Oryza sativa (japo... 220 7e-055
gb|D39577.1|D39577 RICS1051A Rice shoot Oryza sativa (japon... 220 7e-055
gb|D46113.1|D46113 RICS10561A Rice green shoot Oryza sativa... 220 7e-055
gb|C19126.1|C19126 C19126 Rice panicle at ripening stage Or... 220 7e-055
gb|C28478.1|C28478 C28478 Rice callus cDNA Oryza sativa (ja... 220 7e-055
gb|AU070782.1|AU070782 AU070782 Rice cDNA from young root O... 220 7e-055
gb|AU093503.1|AU093503 AU093503 Rice callus Oryza sativa (j... 220 7e-055
gb|AU093504.1|AU093504 AU093504 Rice callus Oryza sativa (j... 220 7e-055
gb|CV729619.1|CV729619 FLO--02-K24.g1 Rice flower lambda ph... 220 7e-055
gb|AU071252.1|AU071252 AU071252 Rice cDNA from young root O... 218 3e-054
gb|AU066010.2|AU066010 AU066010 Rice green shoot Oryza sati... 218 3e-054
gb|CF291585.1|CF291585 14ROOT--02-B05.g1 Rice root plasmid ... 218 3e-054
gb|AU091792.1|AU091792 AU091792 Rice callus Oryza sativa (j... 216 1e-053
gb|C27766.1|C27766 C27766 Rice callus cDNA Oryza sativa (ja... 214 4e-053
gb|C29122.1|C29122 C29122 Rice callus cDNA Oryza sativa (ja... 214 4e-053
gb|C73447.1|C73447 C73447 Rice panicle at flowering stage O... 214 4e-053
gb|C73848.1|C73848 C73848 Rice panicle (longer than 10cm) O... 214 4e-053
gb|C97299.1|C97299 C97299 Rice callus Oryza sativa (japonic... 214 4e-053
gb|AU066344.2|AU066344 AU066344 Rice shoot Oryza sativa (ja... 214 4e-053
gb|AU066281.2|AU066281 AU066281 Rice shoot Oryza sativa (ja... 214 4e-053
gb|C93490.2|C93490 C93490 Rice callus Oryza sativa (japonic... 214 4e-053
gb|AU164738.1|AU164738 AU164738 Rice cDNA from immature lea... 212 2e-052
gb|D28182.1|D28182 RICC0261A Rice callus Oryza sativa (japo... 208 3e-051
gb|AU066168.1|AU066168 AU066168 Rice shoot Oryza sativa (ja... 208 3e-051
gb|AU063645.2|AU063645 AU063645 Rice callus Oryza sativa (j... 208 3e-051
gb|AU063218.1|AU063218 AU063218 Rice callus Oryza sativa (j... 206 1e-050
gb|AU070625.1|AU070625 AU070625 Rice shoot Oryza sativa (ja... 202 2e-049
gb|AU088631.1|AU088631 AU088631 Rice panicle at ripening st... 198 2e-048
gb|D38833.1|D38833 RICC1277A Rice callus Oryza sativa (japo... 196 1e-047
gb|C28067.2|C28067 C28067 Rice callus cDNA Oryza sativa (ja... 196 1e-047
gb|AU184032.1|AU184032 AU184032 Rice root Oryza sativa (jap... 194 4e-047
gb|C25205.1|C25205 C25205 Rice shoot Oryza sativa (japonica... 192 2e-046
gb|AU075587.1|AU075587 AU075587 Rice callus Oryza sativa (j... 192 2e-046
gb|C97800.1|C97800 C97800 Rice callus Oryza sativa (japonic... 188 2e-045
gb|CF330750.1|CF330750 NACL--06-J15.g1 Rice callus plasmid ... 188 2e-045
gb|CX728497.1|CX728497 OSJNEf07O13.r OSJNEf Oryza sativa (j... 188 2e-045
gb|CV729618.1|CV729618 FLO--02-K24.b1 Rice flower lambda ph... 176 9e-042
gb|AU163873.1|AU163873 AU163873 Rice panicle at ripening st... 159 2e-036
gb|AU063042.2|AU063042 AU063042 Rice callus Oryza sativa (j... 159 2e-036
gb|D48500.1|D48500 RICS14720A Rice green shoot Oryza sativa... 141 5e-031
gb|C97965.1|C97965 C97965 Rice callus Oryza sativa (japonic... 139 2e-030
gb|D38786.1|D38786 RICC0209A Rice callus Oryza sativa (japo... 131 5e-028
gb|C97300.1|C97300 C97300 Rice callus Oryza sativa (japonic... 127 8e-027
dbj|AP005244.3| Oryza sativa (japonica cultivar-group) geno... 125 3e-026
gb|AACV01015052.1| Oryza sativa (japonica cultivar-group) c... 125 3e-026
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 125 3e-026
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 125 3e-026
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 125 3e-026
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 125 3e-026
gb|AU056104.1|AU056104 AU056104 Oryza sativa mature leaf Ni... 123 1e-025
gb|AU056105.1|AU056105 AU056105 Oryza sativa mature leaf Ni... 105 3e-020
gb|D15919.1|D15919 RICC1528A Rice callus Oryza sativa (japo... 100 2e-018
gb|CB684946.1|CB684946 OSJNEf14P06.f OSJNEf Oryza sativa (j... 100 2e-018
gb|CF293135.1|CF293135 30DGS--02-D09.g1 Rice leaf plasmid c... 100 2e-018
dbj|AK058503.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-018
dbj|AK066154.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-018
ref|XM_468863.1| Oryza sativa (japonica cultivar-group), mRNA 100 2e-018
ref|XM_468864.1| Oryza sativa (japonica cultivar-group), mRNA 100 2e-018
gb|CF330749.1|CF330749 NACL--06-J15.b1 Rice callus plasmid ... 96 3e-017
gb|CV724149.1|CV724149 root--05-P24.g1 Rice root lambda pha... 68 6e-009
gb|CA999517.1|CA999517 S345O_E08 Rice cold stress germinati... 66 2e-008
gb|CF301586.1|CF301586 7LEAF--06-I03.g1 Rice leaf plasmid c... 66 2e-008
gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 ... 62 4e-007
gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 ... 62 4e-007
gb|AACV01007019.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
ref|NT_107184.1| Oryza sativa (japonica cultivar-group) 62 4e-007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|AU164742.1|AU164742 AU164742 Rice cDNA from immature lea... 60 1e-006
gb|CF296443.1|CF296443 30DGS--06-M23.g1 Rice leaf plasmid c... 58 6e-006
gb|AU097521.1|AU097521 AU097521 Rice shoot Oryza sativa (ja... 56 2e-005
gb|AU223269.1|AU223269 AU223269 Rice shoot Oryza sativa (ja... 48 0.006
gb|AU066191.1|AU066191 AU066191 Rice shoot Oryza sativa (ja... 46 0.022
gb|AQ859974.1|AQ859974 nbeb0013L10f CUGI Rice BAC Library (... 44 0.088
gb|AZ046506.1|AZ046506 nbeb0092I07f CUGI Rice BAC Library (... 44 0.088
gb|AZ047667.1|AZ047667 nbeb0092G02f CUGI Rice BAC Library (... 44 0.088
gb|AACV01007023.1| Oryza sativa (japonica cultivar-group) c... 44 0.088
gb|AQ871732.1|AQ871732 nbeb0044N13r CUGI Rice BAC Library (... 42 0.35
gb|CB684547.1|CB684547 OSJNEf14C21.f OSJNEf Oryza sativa (j... 42 0.35
gb|AACV01002551.1| Oryza sativa (japonica cultivar-group) c... 42 0.35
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 42 0.35
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 42 0.35
dbj|AP003260.5| Oryza sativa (japonica cultivar-group) geno... 42 0.35
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.35
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 42 0.35
>gb|AU057606.1|AU057606 AU057606 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21611_2Z, mRNA sequence
Length = 560
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 71 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 130
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 131 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 190
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 191 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 250
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 251 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 300
>gb|AU089749.1|AU089749 AU089749 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14720, mRNA sequence
Length = 599
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 96 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 155
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 215
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 216 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 275
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 276 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 325
>gb|AU063651.2|AU063651 AU063651 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63431, mRNA sequence
Length = 565
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 93 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 152
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 153 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 212
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 213 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 272
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 273 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 322
>gb|AU184031.1|AU184031 AU184031 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0408, mRNA sequence
Length = 443
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 94 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 153
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 213
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 214 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 273
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 274 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 323
>gb|CA998264.1|CA998264 S234E_D03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 341
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 87 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 146
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 147 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 206
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 207 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 266
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 267 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 316
>gb|CB685007.1|CB685007 OSJNEf15A24.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A24 3', mRNA sequence
Length = 708
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 472 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 413
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 412 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 353
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 352 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 293
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 292 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 243
>gb|CF291584.1|CF291584 14ROOT--02-B05.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-B05, mRNA sequence
Length = 494
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 491 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 432
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 372
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 371 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 312
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 311 gcgaagcatccgaagagcgacctccccgcgtgcttccctcacctcaagaa 262
>gb|CF297382.1|CF297382 30DGS--08-D13.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-D13, mRNA sequence
Length = 520
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 99 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 158
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 159 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 218
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 219 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 278
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 279 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 328
>gb|CF299271.1|CF299271 7LEAF--03-D16.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--03-D16, mRNA sequence
Length = 597
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 473 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 414
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 354
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 353 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 294
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 293 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 244
>gb|CF299272.1|CF299272 7LEAF--03-D16.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--03-D16, mRNA sequence
Length = 541
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 99 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 158
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 159 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 218
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 219 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 278
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 279 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 328
>gb|CF301585.1|CF301585 7LEAF--06-I03.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--06-I03, mRNA sequence
Length = 605
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 117 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 176
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 177 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 236
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 237 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 296
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 297 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 346
>gb|CF313048.1|CF313048 HD--01-A16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-A16, mRNA sequence
Length = 569
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 98 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 157
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 217
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 218 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 277
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 278 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 327
>gb|CF313163.1|CF313163 HD--01-D05.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-D05, mRNA sequence
Length = 584
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 98 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 157
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 217
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 218 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 277
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 278 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 327
>gb|CF314883.1|CF314883 HD--03-J13.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--03-J13, mRNA sequence
Length = 507
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 69 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 128
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 129 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 188
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 189 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 248
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 249 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 298
>gb|CF316071.1|CF316071 HD--05-D15.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-D15, mRNA sequence
Length = 530
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 98 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 157
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 217
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 218 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 277
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 278 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 327
>gb|CF318793.1|CF318793 HD--09-B01.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B01, mRNA sequence
Length = 599
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 502 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 443
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 442 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 383
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 382 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 323
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 322 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 273
>gb|CF319373.1|CF319373 HD--09-N16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-N16, mRNA sequence
Length = 617
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 131 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 190
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 250
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 251 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 310
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 311 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 360
>gb|CF319852.1|CF319852 HD--10-I05.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-I05, mRNA sequence
Length = 536
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 439 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 380
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 379 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 320
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 319 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 260
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 259 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 210
>gb|CV727924.1|CV727924 14Salt--06-F07.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-F07, mRNA sequence
Length = 488
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 98 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 157
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 217
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 218 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 277
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 278 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 327
>dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A07, full
insert sequence
Length = 559
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 107 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 166
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 226
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 227 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 286
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 287 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 336
>ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 559
Score = 242 bits (122), Expect = 2e-061
Identities = 203/230 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 107 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 166
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 226
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 227 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 286
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 287 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 336
>gb|CF297381.1|CF297381 30DGS--08-D13.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-D13, mRNA sequence
Length = 526
Score = 240 bits (121), Expect = 7e-061
Identities = 202/229 (88%)
Strand = Plus / Minus
Query: 125 tgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaaca 184
||||||||||||| | |||||||| ||||||||| | ||||||||| ||||||||||
Sbjct: 526 tgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaaca 467
Query: 185 agggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaaga 244
|||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 466 agggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaaga 407
Query: 245 tctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggagg 304
| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| ||||
Sbjct: 406 tatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgagg 347
Query: 305 cgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 346 cgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 298
>gb|AU092977.1|AU092977 AU092977 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61245, mRNA sequence
Length = 529
Score = 238 bits (120), Expect = 3e-060
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 74 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 133
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 134 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 193
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| |||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 194 atatgcatgcagactttcatctgcaccacctntgagnccaagtgcaaagagcatgctgag 253
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 254 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 303
>gb|AU165708.1|AU165708 AU165708 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4138, mRNA sequence
Length = 584
Score = 236 bits (119), Expect = 1e-059
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 94 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 153
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 154 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 213
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| |||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 214 atatgcatgcagactttcatctgcaccacctntgagaccaagtgcaaagagcatgctgag 273
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 274 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 323
>gb|CB685006.1|CB685006 OSJNEf15A24.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A24 5', mRNA sequence
Length = 539
Score = 234 bits (118), Expect = 5e-059
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 65 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 124
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 125 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 184
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 185 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 244
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||| | |||||||||||
Sbjct: 245 gcgaagcatccgaagagcgacctcaccgcgtgcttctctcacctcaagaa 294
>gb|CF299912.1|CF299912 7LEAF--04-B22.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--04-B22, mRNA sequence
Length = 425
Score = 234 bits (118), Expect = 5e-059
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 86 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 145
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
|| |||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 146 aatggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 205
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 206 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 265
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 266 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 315
>gb|CF307286.1|CF307286 HDA1--06-E10.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-E10, mRNA sequence
Length = 654
Score = 234 bits (118), Expect = 5e-059
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 19 atgggcggcggcaatgggcagaagtcaaagatggcgagggagaggaacatggagaagaac 78
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 79 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 138
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||| ||| ||||| |||
Sbjct: 139 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcagagagcatgctgag 198
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 199 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 248
>gb|CF317073.1|CF317073 HD--06-K03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--06-K03, mRNA sequence
Length = 533
Score = 234 bits (118), Expect = 5e-059
Identities = 199/226 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 111 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 170
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 171 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 230
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 231 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 290
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctca 349
|||| |||||| |||| ||||||| | ||||||||| |||||||
Sbjct: 291 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctca 336
>gb|CF317074.1|CF317074 HD--06-K03.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--06-K03, mRNA sequence
Length = 553
Score = 234 bits (118), Expect = 5e-059
Identities = 199/226 (88%)
Strand = Plus / Minus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 443 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 384
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 324
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 323 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 264
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctca 349
|||| |||||| |||| ||||||| | ||||||||| |||||||
Sbjct: 263 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctca 218
>gb|CF318792.1|CF318792 HD--09-B01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B01, mRNA sequence
Length = 558
Score = 234 bits (118), Expect = 5e-059
Identities = 202/230 (87%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| || ||||||
Sbjct: 106 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggataagaac 165
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 166 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 225
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 226 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 285
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 286 gcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 335
>gb|CF319374.1|CF319374 HD--09-N16.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-N16, mRNA sequence
Length = 475
Score = 230 bits (116), Expect = 7e-058
Identities = 188/212 (88%)
Strand = Plus / Minus
Query: 142 cagaagtccaagatggcgcgcgagaggaacgccgagaagaacaagggcggcaaaggcagc 201
|||||||| ||||||||| | ||||||||| |||||||||||||||| ||| || |||
Sbjct: 469 cagaagtcgaagatggcgagggagaggaacatggagaagaacaagggcgccaaggggagc 410
Query: 202 cagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttc 261
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 409 cagcttgaggccaacaagaaggccatgaacatccagtgcaagatatgcatgcagactttc 350
Query: 262 atctgcaccacctccgaggccaagtgcaaagaacatgcggaggcgaggcatcccaagaac 321
|||||||||||||| ||| ||||||||||||| ||||| ||||||| |||||| |||| |
Sbjct: 349 atctgcaccacctctgagaccaagtgcaaagagcatgctgaggcgaagcatccgaagagc 290
Query: 322 gacctctaccagtgcttcccccacctcaagaa 353
|||||| | ||||||||| |||||||||||
Sbjct: 289 gacctcaccgcgtgcttccctcacctcaagaa 258
>gb|CF319851.1|CF319851 HD--10-I05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-I05, mRNA sequence
Length = 534
Score = 230 bits (116), Expect = 7e-058
Identities = 182/204 (89%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 98 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 157
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 158 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 217
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 218 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 277
Query: 304 gcgaggcatcccaagaacgacctc 327
|||| |||||| |||| |||||||
Sbjct: 278 gcgaagcatccgaagagcgacctc 301
>gb|D38916.1|D38916 RICC2472A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 346
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 29 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 88
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 89 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 148
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 149 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 208
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | |||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 209 gcgaag-atccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 257
>gb|C74188.1|C74188 C74188 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30610_1A, mRNA sequence
Length = 453
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 28 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 87
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 88 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 147
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 148 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 207
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 208 gcga-acatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 256
>gb|AU057759.1|AU057759 AU057759 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21761_1A, mRNA sequence
Length = 548
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 76 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 135
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 136 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 195
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 196 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 255
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 256 gcga-acatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 304
>gb|AU070698.1|AU070698 AU070698 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10116_1A, mRNA sequence
Length = 463
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 16 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 75
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 76 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 135
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 136 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 195
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 196 gcga-acatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 244
>gb|AU161116.1|AU161116 AU161116 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53506, mRNA sequence
Length = 373
Score = 226 bits (114), Expect = 1e-056
Identities = 201/229 (87%), Gaps = 2/229 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 95 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 154
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 214
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 215 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 274
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaaga 352
|||| ||||| |||| ||||||| | ||||||||| ||||||||||
Sbjct: 275 gcga--catccgaagagcgacctcaccgcgtgcttccctcacctcaaga 321
>gb|AU164737.1|AU164737 AU164737 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61057, mRNA sequence
Length = 475
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 95 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 154
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 214
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 215 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 274
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 275 gcga-acatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 323
>gb|AU164741.1|AU164741 AU164741 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61069, mRNA sequence
Length = 469
Score = 226 bits (114), Expect = 1e-056
Identities = 202/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 92 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 151
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 211
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 212 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 271
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 272 gcga-acatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 320
>gb|AU162063.1|AU162063 AU162063 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15660, mRNA sequence
Length = 470
Score = 224 bits (113), Expect = 4e-056
Identities = 196/225 (87%)
Strand = Plus / Plus
Query: 129 cggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaacaaggg 188
||||||||| | |||||||| ||||||||| | ||||||||| ||||||||||||||
Sbjct: 1 cggcggcaatggncagaagtcgaagatggcgagggagaggaacntggagaagaacaaggg 60
Query: 189 cggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctg 248
|| ||| || |||||||| ||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 61 cgccaaggggagccagcttgaggccaacaagaaggccatgnacatccagtgcaagatatg 120
Query: 249 catgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggaggcgag 308
||||||||| |||||||||||||||| ||| ||||||||||||| ||||| |||||||
Sbjct: 121 catgcagactttcatctgcaccacctntgagaccaagtgcaaagagcatgctgaggcgaa 180
Query: 309 gcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 181 gcatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 225
>gb|D38874.1|D38874 RICC1813A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 360
Score = 222 bits (112), Expect = 2e-055
Identities = 200/228 (87%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 95 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 154
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 214
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 215 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 274
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaag 351
|||| | |||| |||| ||||||| | ||||||||| |||||||||
Sbjct: 275 gcgaag-atccgaagagcgacctcaccgcgtgcttccctcacctcaag 321
>gb|D49040.1|D49040 RICS15660A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 478
Score = 222 bits (112), Expect = 2e-055
Identities = 200/228 (87%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 96 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 155
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 215
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 216 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 275
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaag 351
|||| | |||| |||| ||||||| | ||||||||| |||||||||
Sbjct: 276 gcgaag-atccgaagagcgacctcaccgcgtgcttccctcacctcaag 322
>gb|CA998263.1|CA998263 S234E_D02 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 321
Score = 222 bits (112), Expect = 2e-055
Identities = 181/204 (88%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 87 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 146
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 147 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgccag 206
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 207 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 266
Query: 304 gcgaggcatcccaagaacgacctc 327
|||| |||||| |||| |||||||
Sbjct: 267 gcgaagcatccgaagagcgacctc 290
>gb|D38891.1|D38891 RICC2069A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 362
Score = 220 bits (111), Expect = 7e-055
Identities = 201/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 106 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 165
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 166 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 225
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 226 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 285
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | |||| |||| ||||||| | ||||||||| || ||||||||
Sbjct: 286 gcgaag-atccgaagagcgacctcaccgcgtgcttccctcanctcaagaa 334
>gb|D39577.1|D39577 RICS1051A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 380
Score = 220 bits (111), Expect = 7e-055
Identities = 203/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 93 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 152
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 153 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 212
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 213 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 272
Query: 304 gcgaggcatccc-aagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 273 gcgaag-atcccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 322
>gb|D46113.1|D46113 RICS10561A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 416
Score = 220 bits (111), Expect = 7e-055
Identities = 201/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 90 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 149
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 150 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 209
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 210 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 269
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | |||| |||| ||||||| | |||||||| |||||||||||
Sbjct: 270 gcgaag-atccgaagagcgacctcaccgcgtgcttccntcacctcaagaa 318
>gb|C19126.1|C19126 C19126 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10001_1A, mRNA sequence
Length = 414
Score = 220 bits (111), Expect = 7e-055
Identities = 203/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 33 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 92
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 93 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 152
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 153 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 212
Query: 304 gcgaggcatccc-aagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 213 gcgaag-atcccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 262
>gb|C28478.1|C28478 C28478 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C61245_1A, mRNA sequence
Length = 431
Score = 220 bits (111), Expect = 7e-055
Identities = 203/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 75 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 134
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 135 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 194
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 195 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 254
Query: 304 gcgaggcatccc-aagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| | ||||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 255 gcgaag-atcccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 304
>gb|AU070782.1|AU070782 AU070782 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10235_1A, mRNA sequence
Length = 462
Score = 220 bits (111), Expect = 7e-055
Identities = 201/230 (87%), Gaps = 1/230 (0%)
Strand = Plus / Plus
Query: 124 atgggcggcggcaacgcccagaagtccaagatggcgcgcgagaggaacgccgagaagaac 183
|||||||||||||| | |||||||| ||||||||| | ||||||||| |||||||||
Sbjct: 16 atgggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaac 75
Query: 184 aagggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaag 243
||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 76 aagggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaag 135
Query: 244 atctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggag 303
|| ||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| |||
Sbjct: 136 atatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgag 195
Query: 304 gcgaggcatcccaagaacgacctctaccagtgcttcccccacctcaagaa 353
|||| |||| |||| ||||||| | ||||||||| |||||||||||
Sbjct: 196 gcga-anatccgaagagcgacctcaccgcgtgcttccctcacctcaagaa 244
>gb|AU093503.1|AU093503 AU093503 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40062, mRNA sequence
Length = 481
Score = 220 bits (111), Expect = 7e-055
Identities = 180/203 (88%)
Strand = Plus / Plus
Query: 151 aagatggcgcgcgagaggaacgccgagaagaacaagggcggcaaaggcagccagctggag 210
||||||||| | ||||||||| |||||||||||||||| ||| || |||||||| |||
Sbjct: 1 aagatggcgagggagaggaacatggagaagaacaagggcgccaaggggagccagcttgag 60
Query: 211 gccaacaagaaggccatgaacatccagtgcaagatctgcatgcagaccttcatctgcacc 270
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 61 gccaacaagaaggccatgaacatccagtgcaagatatgcatgcagactttcatctgcacc 120
Query: 271 acctccgaggccaagtgcaaagaacatgcggaggcgaggcatcccaagaacgacctctac 330
||||| ||| ||||||||||||| ||||| ||||||| |||||| |||| ||||||| |
Sbjct: 121 acctctgagaccaagtgcaaagagcatgctgaggcgaagcatccgaagagcgacctcacc 180
Query: 331 cagtgcttcccccacctcaagaa 353
||||||||| |||||||||||
Sbjct: 181 gcgtgcttccctcacctcaagaa 203
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 967,770
Number of Sequences: 438736
Number of extensions: 967770
Number of successful extensions: 23448
Number of sequences better than 0.5: 131
Number of HSP's better than 0.5 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22825
Number of HSP's gapped (non-prelim): 597
length of query: 614
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 593
effective length of database: 2,791,206,460
effective search space: 1655185430780
effective search space used: 1655185430780
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)