BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2850725.2.1
         (847 letters)

Database: Oryza_nucl_with_EST.fasta 
           438,736 sequences; 2,800,419,916 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NT_107119.1|  Oryza sativa (japonica cultivar-group)           58   8e-006
gb|AACV01022906.1|  Oryza sativa (japonica cultivar-group) c...    58   8e-006
gb|CH401263.1|  Oryza sativa (japonica cultivar-group) chrom...    58   8e-006
gb|CM000148.1|  Oryza sativa (japonica cultivar-group) chrom...    58   8e-006
dbj|AP008217.1|  Oryza sativa (japonica cultivar-group) geno...    58   8e-006
gb|AC112208.3|  Oryza sativa (japonica cultivar-group) chrom...    58   8e-006
gb|DP000010.1|  Oryza sativa (japonica cultivar-group) chrom...    58   8e-006
dbj|AK061247.1|  Oryza sativa (japonica cultivar-group) cDNA...    54   1e-004
gb|AACV01022905.1|  Oryza sativa (japonica cultivar-group) c...    54   1e-004
dbj|AK059770.1|  Oryza sativa (japonica cultivar-group) cDNA...    50   0.002
dbj|AK106179.1|  Oryza sativa (japonica cultivar-group) cDNA...    50   0.002
gb|AC135793.4|  Oryza sativa chromosome 11 BAC clone OSJNBb0...    50   0.002
ref|NT_107144.1|  Oryza sativa (japonica cultivar-group)           50   0.002
gb|AACV01022671.1|  Oryza sativa (japonica cultivar-group) c...    50   0.002
gb|AACV01022918.1|  Oryza sativa (japonica cultivar-group) c...    50   0.002
gb|CH401260.1|  Oryza sativa (japonica cultivar-group) chrom...    50   0.002
gb|AC138195.2|  Oryza sativa (japonica cultivar-group) chrom...    50   0.002
gb|AC135258.2|  Oryza sativa (japonica cultivar-group) chrom...    50   0.002
gb|AC147811.2|  Oryza sativa (japonica cultivar-group) chrom...    50   0.002
dbj|AP003916.2|  Oryza sativa (japonica cultivar-group) geno...    48   0.008
gb|AACV01016104.1|  Oryza sativa (japonica cultivar-group) c...    48   0.008
ref|NT_079899.2|  Oryza sativa (japonica cultivar-group)           48   0.008
gb|CH401226.1|  Oryza sativa (japonica cultivar-group) chrom...    48   0.008
gb|CM000144.1|  Oryza sativa (japonica cultivar-group) chrom...    48   0.008
dbj|AP008213.1|  Oryza sativa (japonica cultivar-group) geno...    48   0.008
gb|AACV01016102.1|  Oryza sativa (japonica cultivar-group) c...    44   0.12 
ref|XM_477999.1|  Oryza sativa (japonica cultivar-group),  mRNA    44   0.12 
gb|CV722871.1|CV722871  root--01-N05.g1 Rice root lambda pha...    42   0.48 
gb|AACV01022921.1|  Oryza sativa (japonica cultivar-group) c...    42   0.48 
>ref|NT_107119.1| Oryza sativa (japonica cultivar-group)
          Length = 938023

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                          
Query: 387    cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
              ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 543427 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 543486

                                               
Query: 447    tcacgccagtcattcacgtcccgctgccggcct 479
              |||||||| |||||| |||| ||||| ||||||
Sbjct: 543487 tcacgccaatcattctcgtctcgctgtcggcct 543519

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                          
Query: 369    ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
              ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 519118 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 519177

                                                                 
Query: 429    cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
              |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 519178 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 519228

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 701    gaacatgtcacctccaacatagttaacaacaccatca 737
              ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 683647 gaacaagtcacctgcaacatagttaacgacaccatca 683683

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                          
Query: 573    accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
              |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 680352 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 680411

                                       
Query: 633    cagtcctcatcactccagtggtgca 657
              || || ||||| |||||||||||||
Sbjct: 680412 caatcatcatcgctccagtggtgca 680436

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 370    gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
              |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 738835 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 738894

                   
Query: 430    ctgct 434
              |||||
Sbjct: 738895 ctgct 738899

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 621    aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
              ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 543658 aggatcttcacacaatcctcgtcattccagtggtgaagcac 543698
>gb|AACV01022906.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022906, whole
             genome shotgun sequence
          Length = 51114

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                         
Query: 387   cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
             ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 14716 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 14775

                                              
Query: 447   tcacgccagtcattcacgtcccgctgccggcct 479
             |||||||| |||||| |||| ||||| ||||||
Sbjct: 14776 tcacgccaatcattctcgtctcgctgtcggcct 14808

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 621   aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
             ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 14947 aggatcttcacacaatcctcgtcattccagtggtgaagcac 14987
>gb|CH401263.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000100 genomic
               scaffold, whole genome shotgun sequence
          Length = 6309838

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                           
Query: 387     cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
               ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 2507971 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 2508030

                                                
Query: 447     tcacgccagtcattcacgtcccgctgccggcct 479
               |||||||| |||||| |||| ||||| ||||||
Sbjct: 2508031 tcacgccaatcattctcgtctcgctgtcggcct 2508063

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                           
Query: 369     ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
               ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 2486896 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 2486955

                                                                  
Query: 429     cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
               |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 2486956 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 2487006

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 701     gaacatgtcacctccaacatagttaacaacaccatca 737
               ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 2644629 gaacaagtcacctgcaacatagttaacgacaccatca 2644665

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                           
Query: 573     accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
               |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 2641334 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 2641393

                                        
Query: 633     cagtcctcatcactccagtggtgca 657
               || || ||||| |||||||||||||
Sbjct: 2641394 caatcatcatcgctccagtggtgca 2641418

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 370     gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
               |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 2703183 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 2703242

                    
Query: 430     ctgct 434
               |||||
Sbjct: 2703243 ctgct 2703247

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 621     aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
               ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 2508202 aggatcttcacacaatcctcgtcattccagtggtgaagcac 2508242
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
                sequence
          Length = 22593549

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                            
Query: 387      cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
                ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 10363015 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 10363074

                                                 
Query: 447      tcacgccagtcattcacgtcccgctgccggcct 479
                |||||||| |||||| |||| ||||| ||||||
Sbjct: 10363075 tcacgccaatcattctcgtctcgctgtcggcct 10363107

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 369      ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
                ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 10341940 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 10341999

                                                                   
Query: 429      cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
                |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 10342000 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 10342050

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 701      gaacatgtcacctccaacatagttaacaacaccatca 737
                ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 10499673 gaacaagtcacctgcaacatagttaacgacaccatca 10499709

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 573      accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
                |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 10496378 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 10496437

                                         
Query: 633      cagtcctcatcactccagtggtgca 657
                || || ||||| |||||||||||||
Sbjct: 10496438 caatcatcatcgctccagtggtgca 10496462

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                           
Query: 573     accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
               |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 6712434 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 6712493

                                
Query: 633     cagtcctcatcactcca 649
               ||||| ||||| |||||
Sbjct: 6712494 cagtcgtcatcgctcca 6712510

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 702     aacatgtcacctccaacatagttaacaacaccatca 737
               |||||||||||| ||||||||||||| || ||||||
Sbjct: 6712945 aacatgtcacctgcaacatagttaaccacgccatca 6712980

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 370      gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
                |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 10558227 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 10558286

                     
Query: 430      ctgct 434
                |||||
Sbjct: 10558287 ctgct 10558291

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 621      aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
                ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 10363246 aggatcttcacacaatcctcgtcattccagtggtgaagcac 10363286
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                            
Query: 387      cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
                ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 11353907 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 11353966

                                                 
Query: 447      tcacgccagtcattcacgtcccgctgccggcct 479
                |||||||| |||||| |||| ||||| ||||||
Sbjct: 11353967 tcacgccaatcattctcgtctcgctgtcggcct 11353999

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 369      ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
                ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 11329598 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 11329657

                                                                   
Query: 429      cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
                |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 11329658 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 11329708

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 701      gaacatgtcacctccaacatagttaacaacaccatca 737
                ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 11494127 gaacaagtcacctgcaacatagttaacgacaccatca 11494163

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 573      accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
                |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 11490832 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 11490891

                                         
Query: 633      cagtcctcatcactccagtggtgca 657
                || || ||||| |||||||||||||
Sbjct: 11490892 caatcatcatcgctccagtggtgca 11490916

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                           
Query: 573     accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
               |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 7137733 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 7137792

                                
Query: 633     cagtcctcatcactcca 649
               ||||| ||||| |||||
Sbjct: 7137793 cagtcgtcatcgctcca 7137809

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 702     aacatgtcacctccaacatagttaacaacaccatca 737
               |||||||||||| ||||||||||||| || ||||||
Sbjct: 7138244 aacatgtcacctgcaacatagttaaccacgccatca 7138279

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 370      gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
                |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 11549315 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 11549374

                     
Query: 430      ctgct 434
                |||||
Sbjct: 11549375 ctgct 11549379

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 621      aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
                ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 11354138 aggatcttcacacaatcctcgtcattccagtggtgaagcac 11354178
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                          
Query: 387    cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
              ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 140265 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 140324

                                               
Query: 447    tcacgccagtcattcacgtcccgctgccggcct 479
              |||||||| |||||| |||| ||||| ||||||
Sbjct: 140325 tcacgccaatcattctcgtctcgctgtcggcct 140357

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                          
Query: 369    ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
              ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 115956 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 116015

                                                                 
Query: 429    cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
              |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 116016 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 116066

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 621    aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
              ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 140496 aggatcttcacacaatcctcgtcattccagtggtgaagcac 140536
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 8e-006
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                            
Query: 387      cctcgagctccaaatttcttcagcagcttgtagtcactgaaacctgctttctggatgagg 446
                ||||||||||| | ||||||||  |  |||||||||||||| ||||||||   || ||| 
Sbjct: 11433096 cctcgagctcccagtttcttcacaatattgtagtcactgaagcctgctttgctgaagaga 11433155

                                                 
Query: 447      tcacgccagtcattcacgtcccgctgccggcct 479
                |||||||| |||||| |||| ||||| ||||||
Sbjct: 11433156 tcacgccaatcattctcgtctcgctgtcggcct 11433188

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 369      ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
                ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 11408787 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 11408846

                                                                   
Query: 429      cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
                |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 11408847 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 11408897

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 701      gaacatgtcacctccaacatagttaacaacaccatca 737
                ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 11573316 gaacaagtcacctgcaacatagttaacgacaccatca 11573352

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                            
Query: 573      accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
                |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 11570021 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 11570080

                                         
Query: 633      cagtcctcatcactccagtggtgca 657
                || || ||||| |||||||||||||
Sbjct: 11570081 caatcatcatcgctccagtggtgca 11570105

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                           
Query: 573     accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
               |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 7203704 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 7203763

                                
Query: 633     cagtcctcatcactcca 649
               ||||| ||||| |||||
Sbjct: 7203764 cagtcgtcatcgctcca 7203780

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 702     aacatgtcacctccaacatagttaacaacaccatca 737
               |||||||||||| ||||||||||||| || ||||||
Sbjct: 7204215 aacatgtcacctgcaacatagttaaccacgccatca 7204250

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 370      gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
                |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 11628504 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 11628563

                     
Query: 430      ctgct 434
                |||||
Sbjct: 11628564 ctgct 11628568

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 621      aggatcttcacgcagtcctcatcactccagtggtgcagcac 661
                ||||||||||| || ||||| ||| |||||||||| |||||
Sbjct: 11433327 aggatcttcacacaatcctcgtcattccagtggtgaagcac 11433367
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
            insert sequence
          Length = 1262

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                        
Query: 369  ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
            ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 1167 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 1108

                                                               
Query: 429  cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
            |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 1107 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 1057
>gb|AACV01022905.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022905, whole
            genome shotgun sequence
          Length = 10752

 Score = 54.0 bits (27), Expect = 1e-004
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                        
Query: 369  ggatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaa 428
            ||||||| ||| | |||| |||||||||  ||||| ||||  | ||| |||| | |||| 
Sbjct: 4443 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattgaag 4502

                                                               
Query: 429  cctgctttctggatgaggtcacgccagtcattcacgtcccgctgccggcct 479
            |||||||||| || ||| ||||||||||||||  |||| ||||| ||||||
Sbjct: 4503 cctgctttcttgaagagatcacgccagtcattttcgtctcgctgtcggcct 4553
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
           insert sequence
          Length = 1264

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
           |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 954 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 895

                                    
Query: 633 cagtcctcatcactccagtggtgca 657
           || || ||||| |||||||||||||
Sbjct: 894 caatcatcatcgctccagtggtgca 870

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 701 gaacatgtcacctccaacatagttaacaacaccatca 737
           ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 826 gaacaagtcacctgcaacatagttaacgacaccatca 790
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
           insert sequence
          Length = 1362

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
           |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 949 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 890

                                    
Query: 633 cagtcctcatcactccagtggtgca 657
           || || ||||| |||||||||||||
Sbjct: 889 caatcatcatcgctccagtggtgca 865

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 701 gaacatgtcacctccaacatagttaacaacaccatca 737
           ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 821 gaacaagtcacctgcaacatagttaacgacaccatca 785
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                        
Query: 573  accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
            |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 8705 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 8646

                                     
Query: 633  cagtcctcatcactccagtggtgca 657
            || || ||||| |||||||||||||
Sbjct: 8645 caatcatcatcgctccagtggtgca 8621

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 701  gaacatgtcacctccaacatagttaacaacaccatca 737
            ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 5410 gaacaagtcacctgcaacatagttaacgacaccatca 5374
>ref|NT_107144.1| Oryza sativa (japonica cultivar-group)
          Length = 965832

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                          
Query: 573    accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
              |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 921011 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 921070

                               
Query: 633    cagtcctcatcactcca 649
              ||||| ||||| |||||
Sbjct: 921071 cagtcgtcatcgctcca 921087

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 702    aacatgtcacctccaacatagttaacaacaccatca 737
              |||||||||||| ||||||||||||| || ||||||
Sbjct: 921522 aacatgtcacctgcaacatagttaaccacgccatca 921557
>gb|AACV01022671.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022671,
           whole genome shotgun sequence
          Length = 32089

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                       
Query: 573 accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
           |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 757 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 698

                            
Query: 633 cagtcctcatcactcca 649
           ||||| ||||| |||||
Sbjct: 697 cagtcgtcatcgctcca 681

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 702 aacatgtcacctccaacatagttaacaacaccatca 737
           |||||||||||| ||||||||||||| || ||||||
Sbjct: 246 aacatgtcacctgcaacatagttaaccacgccatca 211
>gb|AACV01022918.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022918, whole
            genome shotgun sequence
          Length = 11538

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                        
Query: 573  accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
            |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 6231 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 6172

                                     
Query: 633  cagtcctcatcactccagtggtgca 657
            || || ||||| |||||||||||||
Sbjct: 6171 caatcatcatcgctccagtggtgca 6147

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 701  gaacatgtcacctccaacatagttaacaacaccatca 737
            ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 2936 gaacaagtcacctgcaacatagttaacgacaccatca 2900
>gb|CH401260.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000097
              genomic scaffold, whole genome shotgun sequence
          Length = 385661

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                          
Query: 573    accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
              |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 327880 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 327939

                               
Query: 633    cagtcctcatcactcca 649
              ||||| ||||| |||||
Sbjct: 327940 cagtcgtcatcgctcca 327956

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 702    aacatgtcacctccaacatagttaacaacaccatca 737
              |||||||||||| ||||||||||||| || ||||||
Sbjct: 328391 aacatgtcacctgcaacatagttaaccacgccatca 328426
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21,
              complete sequence
          Length = 147381

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                          
Query: 573    accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
              |||||||||||||| || ||||| || || ||||| ||||| |  |  | ||||||||||
Sbjct: 122956 accttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacg 122897

                                       
Query: 633    cagtcctcatcactccagtggtgca 657
              || || ||||| |||||||||||||
Sbjct: 122896 caatcatcatcgctccagtggtgca 122872

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 701    gaacatgtcacctccaacatagttaacaacaccatca 737
              ||||| ||||||| ||||||||||||| |||||||||
Sbjct: 119661 gaacaagtcacctgcaacatagttaacgacaccatca 119625

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 370   gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
             |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 64473 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 64414

                  
Query: 430   ctgct 434
             |||||
Sbjct: 64413 ctgct 64409
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                         
Query: 573   accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
             |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 44822 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 44763

                              
Query: 633   cagtcctcatcactcca 649
             ||||| ||||| |||||
Sbjct: 44762 cagtcgtcatcgctcca 44746

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 702   aacatgtcacctccaacatagttaacaacaccatca 737
             |||||||||||| ||||||||||||| || ||||||
Sbjct: 44311 aacatgtcacctgcaacatagttaaccacgccatca 44276
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                         
Query: 573   accttccctccctcttcccgtgaaggtattgccttcctgcagttggcaaggatcttcacg 632
             |||||||||||||| |  |||||||| || || ||| |||| | ||  ||||||||||||
Sbjct: 50953 accttccctccctcctttcgtgaagggatggctttcttgcactgggacaggatcttcacg 51012

                              
Query: 633   cagtcctcatcactcca 649
             ||||| ||||| |||||
Sbjct: 51013 cagtcgtcatcgctcca 51029

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 702   aacatgtcacctccaacatagttaacaacaccatca 737
             |||||||||||| ||||||||||||| || ||||||
Sbjct: 51464 aacatgtcacctgcaacatagttaaccacgccatca 51499
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1634_H04
          Length = 151699

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 624    atcttcacgcagtcctcatcactccagt 651
              ||||| ||||||||||||||||||||||
Sbjct: 114158 atctttacgcagtcctcatcactccagt 114185

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 624   atcttcacgcagtcctcatcactcca 649
             ||||||| ||||||||||||||||||
Sbjct: 82250 atcttcatgcagtcctcatcactcca 82275
>gb|AACV01016104.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016104, whole
            genome shotgun sequence
          Length = 12834

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 624  atcttcacgcagtcctcatcactccagt 651
            ||||| ||||||||||||||||||||||
Sbjct: 1297 atctttacgcagtcctcatcactccagt 1324
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
          Length = 17249721

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 624     atcttcacgcagtcctcatcactccagt 651
               ||||| ||||||||||||||||||||||
Sbjct: 3916795 atctttacgcagtcctcatcactccagt 3916822

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 624     atcttcacgcagtcctcatcactcca 649
               ||||||| ||||||||||||||||||
Sbjct: 3884887 atcttcatgcagtcctcatcactcca 3884912
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
               scaffold, whole genome shotgun sequence
          Length = 15204090

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 624     atcttcacgcagtcctcatcactccagt 651
               ||||| ||||||||||||||||||||||
Sbjct: 2009170 atctttacgcagtcctcatcactccagt 2009197

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 624     atcttcacgcagtcctcatcactcca 649
               ||||||| ||||||||||||||||||
Sbjct: 1990062 atcttcatgcagtcctcatcactcca 1990087
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
                sequence
          Length = 28626509

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 624      atcttcacgcagtcctcatcactccagt 651
                ||||| ||||||||||||||||||||||
Sbjct: 15408609 atctttacgcagtcctcatcactccagt 15408636

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 624      atcttcacgcagtcctcatcactcca 649
                ||||||| ||||||||||||||||||
Sbjct: 15389501 atcttcatgcagtcctcatcactcca 15389526
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 624      atcttcacgcagtcctcatcactccagt 651
                ||||| ||||||||||||||||||||||
Sbjct: 16293720 atctttacgcagtcctcatcactccagt 16293747

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 624      atcttcacgcagtcctcatcactcca 649
                ||||||| ||||||||||||||||||
Sbjct: 16261812 atcttcatgcagtcctcatcactcca 16261837
>gb|AACV01016102.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016102, whole
             genome shotgun sequence
          Length = 34323

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 624   atcttcacgcagtcctcatcactcca 649
             ||||||| ||||||||||||||||||
Sbjct: 23286 atcttcatgcagtcctcatcactcca 23311
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1083

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 624 atcttcacgcagtcctcatcactcca 649
           ||||||| ||||||||||||||||||
Sbjct: 824 atcttcatgcagtcctcatcactcca 799
>gb|CV722871.1|CV722871 root--01-N05.g1 Rice root lambda phage cDNA library (root) Oryza
           sativa (japonica cultivar-group) cDNA clone
           root--01-N05, mRNA sequence
          Length = 483

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 370 gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
           |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 305 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 364

                
Query: 430 ctgct 434
           |||||
Sbjct: 365 ctgct 369
>gb|AACV01022921.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022921, whole
            genome shotgun sequence
          Length = 6663

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 370  gatagatctccaggacacctcgagctccaaatttcttcagcagcttgtagtcactgaaac 429
            |||||| ||| | |||| ||||||| |||| ||||||||  | ||| ||||||||||| |
Sbjct: 5724 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatc 5783

                 
Query: 430  ctgct 434
            |||||
Sbjct: 5784 ctgct 5788
  Database: Oryza_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:41 PM
  Number of letters in database: 2,800,419,916
  Number of sequences in database:  438,736
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,163,483
Number of Sequences: 438736
Number of extensions: 1163483
Number of successful extensions: 5971
Number of sequences better than  0.5: 29
Number of HSP's better than  0.5 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5654
Number of HSP's gapped (non-prelim): 307
length of query: 847
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 826
effective length of database: 2,791,206,460
effective search space: 2305536535960
effective search space used: 2305536535960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)