BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750927.2.1
(1331 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flow... 601 e-169
gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6... 601 e-169
dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA... 601 e-169
dbj|AP004178.3| Oryza sativa (japonica cultivar-group) geno... 289 2e-075
gb|AACV01005162.1| Oryza sativa (japonica cultivar-group) c... 289 2e-075
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 289 2e-075
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 289 2e-075
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 289 2e-075
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 289 2e-075
gb|D22380.1|D22380 RICC10934A Rice callus Oryza sativa (jap... 280 2e-072
dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA... 252 4e-064
gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-... 252 4e-064
ref|XM_473638.1| Oryza sativa (japonica cultivar-group), p... 252 4e-064
gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) c... 250 2e-063
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 250 2e-063
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 250 2e-063
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 250 2e-063
emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromoso... 250 2e-063
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 250 2e-063
gb|AQ578837.1|AQ578837 nbxb0093F09f CUGI Rice BAC Library O... 224 1e-055
dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA... 224 1e-055
gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) ... 224 1e-055
dbj|AP005529.3| Oryza sativa (japonica cultivar-group) geno... 224 1e-055
gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-... 224 1e-055
gb|AACV01018907.1| Oryza sativa (japonica cultivar-group) c... 224 1e-055
ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA 224 1e-055
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 224 1e-055
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 224 1e-055
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 224 1e-055
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 224 1e-055
gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS ... 216 2e-053
emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein 204 9e-050
gb|CF297258.1|CF297258 30DGS--07-P17.b1 Rice leaf plasmid c... 200 1e-048
dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA... 200 1e-048
dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA... 200 1e-048
dbj|AK104921.1| Oryza sativa (japonica cultivar-group) cDNA... 200 1e-048
gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS ... 200 1e-048
gb|AC098695.2| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|AY551915.1| Oryza sativa (japonica cultivar-group) MADS-... 200 1e-048
gb|AACV01005781.1| Oryza sativa (japonica cultivar-group) c... 200 1e-048
ref|XM_468584.1| Oryza sativa (japonica cultivar-group), p... 200 1e-048
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 200 1e-048
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 200 1e-048
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 200 1e-048
gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pi... 196 2e-047
gb|CF294135.1|CF294135 30DGS--03-I23.g1 Rice leaf plasmid c... 184 8e-044
gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8... 182 3e-043
dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA... 182 3e-043
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 182 3e-043
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 182 3e-043
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 182 3e-043
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 182 3e-043
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 182 3e-043
gb|C75937.1|C75937 C75937 Rice callus Oryza sativa (japonic... 178 5e-042
gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid ... 178 5e-042
dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA... 178 5e-042
dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA... 178 5e-042
gb|AC105732.3| Oryza sativa (japonica cultivar-group) chrom... 178 5e-042
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 178 5e-042
gb|AACV01006102.1| Oryza sativa (japonica cultivar-group) c... 178 5e-042
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 178 5e-042
gb|AU068508.1|AU068508 AU068508 Rice callus Oryza sativa (j... 176 2e-041
gb|D46933.1|D46933 RICS11905A Rice green shoot Oryza sativa... 174 8e-041
dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA... 163 3e-037
gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS ... 163 3e-037
dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA... 163 3e-037
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 163 3e-037
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 163 3e-037
gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-... 163 3e-037
gb|AACV01007934.1| Oryza sativa (japonica cultivar-group) c... 163 3e-037
ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA 163 3e-037
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 163 3e-037
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 163 3e-037
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 163 3e-037
gb|CV720574.1|CV720574 YBH--01-B14.b1 Rice before heading y... 161 1e-036
gb|CV721367.1|CV721367 YBH--03-N20.b1 Rice before heading y... 161 1e-036
dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA... 147 2e-032
dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA... 147 2e-032
gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-... 147 2e-032
gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-... 147 2e-032
gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-... 147 2e-032
ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA 147 2e-032
dbj|AK108568.1| Oryza sativa (japonica cultivar-group) cDNA... 145 7e-032
gb|AY553724.1| Oryza sativa (japonica cultivar-group) MADS-... 145 7e-032
gb|AACV01000383.1| Oryza sativa (japonica cultivar-group) c... 145 7e-032
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 145 7e-032
ref|NM_188300.1| Oryza sativa (japonica cultivar-group), p... 145 7e-032
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 145 7e-032
dbj|AP003105.2| Oryza sativa (japonica cultivar-group) geno... 145 7e-032
dbj|AP003197.4| Oryza sativa (japonica cultivar-group) geno... 145 7e-032
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 145 7e-032
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 145 7e-032
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 145 7e-032
gb|CB655394.1|CB655394 OSJNEc08M08.r OSJNEc Oryza sativa (j... 139 4e-030
gb|CB658195.1|CB658195 OSJNEc14A21.f OSJNEc Oryza sativa (j... 139 4e-030
gb|CB659436.1|CB659436 OSJNEc16G22.f OSJNEc Oryza sativa (j... 139 4e-030
gb|CF332627.1|CF332627 JMT--01-D10.b1 AtJMT-overexpressing ... 139 4e-030
gb|CF334759.1|CF334759 JMT--04-C18.b1 AtJMT-overexpressing ... 139 4e-030
emb|AL513004.1|CNS07EFJ Oryza sativa (japonica cultivar-gro... 139 4e-030
dbj|AK070135.1| Oryza sativa (japonica cultivar-group) cDNA... 139 4e-030
dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA... 139 4e-030
gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS ... 139 4e-030
emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC O... 139 4e-030
emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC O... 139 4e-030
emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B... 139 4e-030
gb|AY345224.1| Oryza sativa (japonica cultivar-group) trans... 139 4e-030
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 139 4e-030
gb|AY551912.1| Oryza sativa (japonica cultivar-group) MADS-... 139 4e-030
gb|AY551919.1| Oryza sativa (japonica cultivar-group) MADS-... 139 4e-030
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 139 4e-030
gb|AACV01022000.1| Oryza sativa (japonica cultivar-group) c... 139 4e-030
gb|AACV01024177.1| Oryza sativa (japonica cultivar-group) c... 139 4e-030
ref|NM_197541.1| Oryza sativa (japonica cultivar-group) put... 139 4e-030
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 139 4e-030
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-030
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 139 4e-030
dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA... 137 2e-029
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 137 2e-029
gb|AACV01016746.1| Oryza sativa (japonica cultivar-group) c... 137 2e-029
ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA 137 2e-029
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 137 2e-029
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 137 2e-029
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 137 2e-029
emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box pro... 137 2e-029
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 137 2e-029
gb|AU100638.1|AU100638 AU100638 Rice callus Oryza sativa (j... 133 3e-028
gb|AQ271415.1|AQ271415 nbxb0025B08f CUGI Rice BAC Library O... 131 1e-027
gb|AQ330858.1|AQ330858 nbxb0048E10f CUGI Rice BAC Library O... 131 1e-027
gb|AQ575051.1|AQ575051 nbxb0086L17r CUGI Rice BAC Library O... 131 1e-027
gb|AU225127.1|AU225127 AU225127 Oryza sativa Koshihikari pi... 131 1e-027
gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5... 131 1e-027
dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA... 131 1e-027
gb|AACV01013077.1| Oryza sativa (japonica cultivar-group) c... 131 1e-027
dbj|AB026295.2| Oryza sativa (japonica cultivar-group) geno... 131 1e-027
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 131 1e-027
ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA 131 1e-027
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 131 1e-027
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 131 1e-027
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 131 1e-027
dbj|AK111723.1| Oryza sativa (japonica cultivar-group) cDNA... 129 4e-027
gb|AC135920.2| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
gb|AACV01011127.1| Oryza sativa (japonica cultivar-group) c... 129 4e-027
ref|NT_107224.1| Oryza sativa (japonica cultivar-group) 129 4e-027
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 129 4e-027
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 129 4e-027
dbj|AB232157.1| Oryza sativa (japonica cultivar-group) mRNA... 129 4e-027
gb|CB652556.1|CB652556 OSJNEc02K24.f OSJNEc Oryza sativa (j... 127 2e-026
gb|CF306783.1|CF306783 HDA1--04-N10.g1 OsHDAC1-overexpressi... 127 2e-026
gb|CF322477.1|CF322477 HDN--01-C18.g1 OsHDAC1-overexpressin... 127 2e-026
gb|CF325684.1|CF325684 JMT1--03-O10.g1 AtJMT-overexpressing... 127 2e-026
dbj|AB003322.1| Oryza sativa (japonica cultivar-group) mRNA... 127 2e-026
dbj|AK070121.1| Oryza sativa (japonica cultivar-group) cDNA... 127 2e-026
dbj|AP004159.3| Oryza sativa (japonica cultivar-group) geno... 127 2e-026
gb|AACV01005456.1| Oryza sativa (japonica cultivar-group) c... 127 2e-026
ref|XM_467915.1| Oryza sativa (japonica cultivar-group), mRNA 127 2e-026
dbj|AB107957.1| Oryza sativa (japonica cultivar-group) RMD1... 127 2e-026
gb|AACV01011125.1| Oryza sativa (japonica cultivar-group) c... 125 7e-026
gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing... 121 1e-024
gb|D15657.2|D15657 RICC1032A Rice callus Oryza sativa (japo... 117 2e-023
gb|AU068577.1|AU068577 AU068577 Rice callus Oryza sativa (j... 115 6e-023
gb|CV721444.1|CV721444 YBH--04-C11.b1 Rice before heading y... 111 1e-021
gb|CV734295.1|CV734295 FLO--09-J13.b1 Rice flower lambda ph... 111 1e-021
gb|D47632.1|D47632 RICS13245A Rice green shoot Oryza sativa... 107 2e-020
gb|AQ796536.1|AQ796536 nbxb0066E14r CUGI Rice BAC Library O... 100 4e-018
gb|C26796.1|C26796 C26796 Rice callus cDNA Oryza sativa (ja... 100 4e-018
gb|C74765.1|C74765 C74765 Rice cDNA from immature leaf incl... 100 4e-018
dbj|AK070958.1| Oryza sativa (japonica cultivar-group) cDNA... 100 4e-018
gb|AY177693.1| Oryza sativa (japonica cultivar-group) trans... 100 4e-018
gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJN... 100 4e-018
gb|AY551913.1| Oryza sativa (japonica cultivar-group) MADS-... 100 4e-018
gb|AACV01002820.1| Oryza sativa (japonica cultivar-group) c... 100 4e-018
gb|AACV01005163.1| Oryza sativa (japonica cultivar-group) c... 100 4e-018
ref|XM_463559.1| Oryza sativa (japonica cultivar-group), p... 100 4e-018
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 100 4e-018
dbj|AP003379.2| Oryza sativa (japonica cultivar-group) geno... 100 4e-018
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 100 4e-018
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 100 4e-018
gb|AU078632.1|AU078632 AU078632 Rice callus Oryza sativa (j... 98 1e-017
gb|AC090974.1|AC090974 Oryza sativa (japonica cultivar-grou... 90 4e-015
dbj|AP003405.1| Oryza sativa (japonica cultivar-group) chro... 90 4e-015
dbj|AK070894.1| Oryza sativa (japonica cultivar-group) cDNA... 90 4e-015
gb|AY551924.1| Oryza sativa (japonica cultivar-group) MADS-... 90 4e-015
gb|AACV01002803.1| Oryza sativa (japonica cultivar-group) c... 90 4e-015
ref|XM_463532.1| Oryza sativa (japonica cultivar-group), p... 90 4e-015
dbj|AP003561.2| Oryza sativa (japonica cultivar-group) geno... 90 4e-015
dbj|AP005156.4| Oryza sativa (japonica cultivar-group) geno... 86 6e-014
dbj|AP003736.3| Oryza sativa (japonica cultivar-group) geno... 86 6e-014
gb|AACV01016495.1| Oryza sativa (japonica cultivar-group) c... 86 6e-014
gb|C74564.1|C74564 C74564 Rice panicle shorter than 3cm Ory... 84 2e-013
gb|C91691.1|C91691 C91691 Rice panicle shorter than 3cm Ory... 84 2e-013
dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA... 84 2e-013
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-013
gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-... 84 2e-013
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA 84 2e-013
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 84 2e-013
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
gb|AU095354.1|AU095354 AU095354 Rice cDNA from immature lea... 82 9e-013
dbj|AB003326.1| Oryza sativa (japonica cultivar-group) mRNA... 82 9e-013
dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chro... 82 9e-013
dbj|AK069122.1| Oryza sativa (japonica cultivar-group) cDNA... 82 9e-013
dbj|AK100233.1| Oryza sativa (japonica cultivar-group) cDNA... 82 9e-013
dbj|AP004566.3| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
dbj|AP005148.3| Oryza sativa (japonica cultivar-group) geno... 82 9e-013
gb|AY551925.1| Oryza sativa (japonica cultivar-group) MADS-... 82 9e-013
gb|AC109595.2| Oryza sativa (japonica cultivar-group) chrom... 82 9e-013
gb|AACV01012211.1| Oryza sativa (japonica cultivar-group) c... 82 9e-013
gb|AACV01017125.1| Oryza sativa (japonica cultivar-group) c... 82 9e-013
gb|AACV01018778.1| Oryza sativa (japonica cultivar-group) c... 82 9e-013
ref|XM_479752.1| Oryza sativa (japonica cultivar-group), mRNA 82 9e-013
ref|XM_483124.1| Oryza sativa (japonica cultivar-group), mRNA 82 9e-013
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 82 9e-013
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 82 9e-013
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 82 9e-013
gb|C72923.1|C72923 C72923 Rice panicle at flowering stage O... 80 4e-012
gb|CV733039.1|CV733039 FLO--07-M12.b1 Rice flower lambda ph... 78 1e-011
gb|AY177701.1| Oryza sativa (japonica cultivar-group) trans... 78 1e-011
ref|XM_483489.1| Oryza sativa (japonica cultivar-group), mRNA 78 1e-011
dbj|AP003910.1| Oryza sativa (japonica cultivar-group) chro... 74 2e-010
dbj|AK111776.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AP005545.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AACV01013335.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 74 2e-010
dbj|AP006720.1| Oryza sativa (japonica cultivar-group) geno... 72 9e-010
dbj|AP004049.2| Oryza sativa (japonica cultivar-group) geno... 72 9e-010
gb|AACV01003159.1| Oryza sativa (japonica cultivar-group) c... 72 9e-010
ref|XM_463804.1| Oryza sativa (japonica cultivar-group), mRNA 72 9e-010
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 72 9e-010
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 72 9e-010
gb|DU168973.1|DU168973 UCDRdSpm832B_3.1 UCD RdSpm Rice Inse... 70 3e-009
gb|D47001.1|D47001 RICS12021A Rice green shoot Oryza sativa... 70 3e-009
dbj|AG208742.1| Oryza sativa (japonica cultivar-group) DNA,... 68 1e-008
gb|C98962.1|C98962 C98962 Rice panicle at flowering stage O... 68 1e-008
gb|AY345221.1| Oryza sativa (japonica cultivar-group) trans... 68 1e-008
gb|AY345222.1| Oryza sativa (japonica cultivar-group) trans... 68 1e-008
gb|AC125471.3| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|AACV01006007.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 68 1e-008
emb|AJ536158.1|OSA536158 Oryza sativa (japonica cultivar-gr... 68 1e-008
gb|C73896.1|C73896 C73896 Rice panicle (longer than 10cm) O... 66 5e-008
gb|AU029711.1|AU029711 AU029711 Rice panicle shorter than 3... 66 5e-008
gb|C73941.2|C73941 C73941 Rice panicle (longer than 10cm) O... 66 5e-008
gb|CD670941.1|CD670941 OsMR362 5MT resistant rice mutant cD... 66 5e-008
dbj|AB003323.1| Oryza sativa (japonica cultivar-group) mRNA... 66 5e-008
emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC O... 66 5e-008
gb|AY250075.1| Oryza sativa (japonica cultivar-group) MADS2... 66 5e-008
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 66 5e-008
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 66 5e-008
gb|AACV01014909.1| Oryza sativa (japonica cultivar-group) c... 66 5e-008
gb|AACV01024998.1| Oryza sativa (japonica cultivar-group) c... 66 5e-008
dbj|AP004329.3| Oryza sativa (japonica cultivar-group) geno... 66 5e-008
dbj|AP005463.3| Oryza sativa (japonica cultivar-group) geno... 66 5e-008
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 66 5e-008
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 66 5e-008
gb|CV731070.1|CV731070 FLO--04-O21.g1 Rice flower lambda ph... 64 2e-007
dbj|AB003327.1| Oryza sativa (japonica cultivar-group) mRNA... 64 2e-007
dbj|AK066160.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP003951.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01002956.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01014097.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP006167.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CZ168542.1|CZ168542 UCDRGT395_5.1 UCD RGT Rice Insertion... 58 1e-005
gb|CA755986.1|CA755986 BR030032000_PLATE_E04_29_033.ab1 OA ... 58 1e-005
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 58 1e-005
gb|AF424549.1| Oryza sativa (japonica cultivar-group) MADS-... 58 1e-005
dbj|AK069317.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AY177696.1| Oryza sativa (japonica cultivar-group) trans... 58 1e-005
gb|AY177699.1| Oryza sativa (japonica cultivar-group) trans... 58 1e-005
gb|AY551923.1| Oryza sativa (japonica cultivar-group) MADS-... 58 1e-005
gb|AACV01002270.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01004772.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NM_191843.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 58 1e-005
dbj|AP003343.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|AU312137.1|AU312137 AU312137 Oryza sativa anther cDNA Or... 56 5e-005
gb|CF336890.1|CF336890 JMT--07-B20.b1 AtJMT-overexpressing ... 54 2e-004
gb|AACV01009916.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|XM_472756.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 54 2e-004
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 54 2e-004
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 54 2e-004
gb|AQ272168.1|AQ272168 nbxb0027J05r CUGI Rice BAC Library O... 52 8e-004
gb|AQ866444.1|AQ866444 nbeb0028G05f CUGI Rice BAC Library (... 52 8e-004
gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 ... 52 8e-004
emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC O... 52 8e-004
gb|AACV01008219.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01024966.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
dbj|AP004322.1| Oryza sativa (japonica cultivar-group) chro... 50 0.003
dbj|AK102927.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK111859.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AY177695.2| Oryza sativa (japonica cultivar-group) trans... 50 0.003
gb|AY345223.2| Oryza sativa (japonica cultivar-group) trans... 50 0.003
dbj|AP004741.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP003791.4| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01002875.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01009230.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01013305.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|XM_471721.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 50 0.003
dbj|AP006757.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromoso... 50 0.003
gb|AU101219.1|AU101219 AU101219 Rice panicle at flowering s... 48 0.012
dbj|AK109522.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
gb|AY177697.1| Oryza sativa (japonica cultivar-group) trans... 48 0.012
dbj|AP004836.2| Oryza sativa (japonica cultivar-group) geno... 48 0.012
dbj|AP004113.3| Oryza sativa (japonica cultivar-group) geno... 48 0.012
gb|AACV01003433.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01014099.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
ref|XM_464283.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.012
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 48 0.012
dbj|AP003908.1| Oryza sativa (japonica cultivar-group) chro... 46 0.049
gb|AY177694.1| Oryza sativa (japonica cultivar-group) trans... 46 0.049
gb|AY345220.1| Oryza sativa (japonica cultivar-group) trans... 46 0.049
dbj|AP004093.3| Oryza sativa (japonica cultivar-group) geno... 46 0.049
dbj|AP004863.3| Oryza sativa (japonica cultivar-group) geno... 46 0.049
gb|AACV01003409.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
gb|AACV01018525.1| Oryza sativa (japonica cultivar-group) c... 46 0.049
ref|XM_464216.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.049
ref|XM_482530.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.049
dbj|AP003868.3| Oryza sativa (japonica cultivar-group) geno... 46 0.049
dbj|AP003331.3| Oryza sativa (japonica cultivar-group) geno... 44 0.19
gb|AACV01000976.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 44 0.19
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.19
>gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone pNS-YP13, mRNA
sequence
Length = 670
Score = 601 bits (303), Expect = e-169
Identities = 468/523 (89%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 115 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 174
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 175 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 234
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 294
Query: 392 ggcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaat 451
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 295 ggcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaac 354
Query: 452 ggcgcactctctgaaactcagagctggtaccaggaaatgtcaaaactgagggcaaaattc 511
||||| |||||||| ||||| |||||||| ||||||||||| ||| ||||||||
Sbjct: 355 aatgcactttctgaaacccagagttggtaccatgaaatgtcaaagttgaaagcaaaattt 414
Query: 512 gaggccttgcagcgcactcagaggcacttgcttggggaggaacttggcccactgagtgtg 571
|| || |||||||||||||| |||||||||||||||||||| ||||| ||||| || ||
Sbjct: 415 gaagctttgcagcgcactcaaaggcacttgcttggggaggatcttggaccactcagcgtc 474
Query: 572 aaggagttgcagcagctagagaaacagctcgaatgtgctttgtcacaggcaagacagaga 631
|| || ||||||||||| ||||||||||| |||||||| | |||||||| |||||||||
Sbjct: 475 aaagaattgcagcagctggagaaacagcttgaatgtgcactatcacaggcgagacagaga 534
Query: 632 aagacacaacttatgatggagcaagtggaagagctccgcagaaaggagcgacacctggga 691
||||| ||||| |||||||| |||||||| || || |||||||||||||| || |||||
Sbjct: 535 aagacgcaactgatgatggaacaagtggaggaacttcgcagaaaggagcgtcagctgggt 594
Query: 692 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggtt 734
||||| || ||||||||||| |||||||| || | ||||||||
Sbjct: 595 gaaattaataggcaactcaagcacaagctcgaggttgaaggtt 637
>gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6) mRNA, complete cds
Length = 1043
Score = 601 bits (303), Expect = e-169
Identities = 468/523 (89%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 34 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 93
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 94 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 153
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 213
Query: 392 ggcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaat 451
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 214 ggcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaac 273
Query: 452 ggcgcactctctgaaactcagagctggtaccaggaaatgtcaaaactgagggcaaaattc 511
||||| |||||||||||||| |||||||| ||||||||||| ||| ||||||||
Sbjct: 274 aatgcactttctgaaactcagagttggtaccatgaaatgtcaaagttgaaagcaaaattt 333
Query: 512 gaggccttgcagcgcactcagaggcacttgcttggggaggaacttggcccactgagtgtg 571
|| || |||||||||||||| |||||||||||||||||||| ||||| ||||| || ||
Sbjct: 334 gaagctttgcagcgcactcaaaggcacttgcttggggaggatcttggaccactcagcgtc 393
Query: 572 aaggagttgcagcagctagagaaacagctcgaatgtgctttgtcacaggcaagacagaga 631
|| || ||||||||||| ||||||||||| |||||||| | |||||||| |||||||||
Sbjct: 394 aaagaattgcagcagctggagaaacagcttgaatgtgcactatcacaggcgagacagaga 453
Query: 632 aagacacaacttatgatggagcaagtggaagagctccgcagaaaggagcgacacctggga 691
||||| ||||| |||||||| || ||||| || || |||||||||||||| || |||||
Sbjct: 454 aagacgcaactgatgatggaacaggtggaggaacttcgcagaaaggagcgtcagctgggt 513
Query: 692 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggtt 734
||||| || ||||||||||| |||||||| || | ||||||||
Sbjct: 514 gaaattaataggcaactcaagcacaagctcgaggttgaaggtt 556
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 754 gagaacaacttcatgctgggatgggttctttgag 787
>dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N09, full
insert sequence
Length = 1134
Score = 601 bits (303), Expect = e-169
Identities = 468/523 (89%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 134 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 193
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 194 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 253
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 313
Query: 392 ggcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaat 451
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 314 ggcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaac 373
Query: 452 ggcgcactctctgaaactcagagctggtaccaggaaatgtcaaaactgagggcaaaattc 511
||||| |||||||| ||||| |||||||| ||||||||||| ||| ||||||||
Sbjct: 374 aatgcactttctgaaacccagagttggtaccatgaaatgtcaaagttgaaagcaaaattt 433
Query: 512 gaggccttgcagcgcactcagaggcacttgcttggggaggaacttggcccactgagtgtg 571
|| || |||||||||||||| |||||||||||||||||||| ||||| ||||| || ||
Sbjct: 434 gaagctttgcagcgcactcaaaggcacttgcttggggaggatcttggaccactcagcgtc 493
Query: 572 aaggagttgcagcagctagagaaacagctcgaatgtgctttgtcacaggcaagacagaga 631
|| || ||||||||||| ||||||||||| |||||||| | |||||||| |||||||||
Sbjct: 494 aaagaattgcagcagctggagaaacagcttgaatgtgcactatcacaggcgagacagaga 553
Query: 632 aagacacaacttatgatggagcaagtggaagagctccgcagaaaggagcgacacctggga 691
||||| ||||| |||||||| |||||||| || || |||||||||||||| || |||||
Sbjct: 554 aagacgcaactgatgatggaacaagtggaggaacttcgcagaaaggagcgtcagctgggt 613
Query: 692 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggtt 734
||||| || ||||||||||| |||||||| || | ||||||||
Sbjct: 614 gaaattaataggcaactcaagcacaagctcgaggttgaaggtt 656
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 854 gagaacaacttcatgctgggatgggttctttgag 887
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1123_G04
Length = 124666
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 22056 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 22115
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 22116 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 22175
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22176 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 22235
Query: 392 gg 393
||
Sbjct: 22236 gg 22237
Score = 99.6 bits (50), Expect = 4e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 533 aggcacttgcttggggaggaacttggcccactgagtgtgaaggagttgcagcagctagag 592
|||||||||||||||||||| ||||| ||||| || || || || ||||||||||| |||
Sbjct: 27302 aggcacttgcttggggaggatcttggaccactcagcgtcaaagaattgcagcagctggag 27361
Query: 593 aaacagctcgaatgtgctttgtcacaggcaagacagagaaag 634
|||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 27362 aaacagcttgaatgtgcactatcacaggcgagacagagaaag 27403
Score = 99.6 bits (50), Expect = 4e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 393 gcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24995 gcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaa 25052
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 29611 gagaacaacttcatgctgggatgggttctttgag 29644
Score = 50.1 bits (25), Expect = 0.003
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 471 agagctggtaccaggaaatgtcaaaactgagggcaaaattcgaggccttgcagcgcactc 530
|||| |||||||| ||||||||||| ||| |||||||| || || |||||||||||||
Sbjct: 27009 agagttggtaccatgaaatgtcaaagttgaaagcaaaatttgaagctttgcagcgcactc 27068
Query: 531 a 531
|
Sbjct: 27069 a 27069
>gb|AACV01005162.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005162, whole
genome shotgun sequence
Length = 29737
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Minus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 1009 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 950
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 949 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 890
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 830
Query: 392 gg 393
||
Sbjct: 829 gg 828
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 3059603 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 3059662
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 3059663 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 3059722
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059723 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 3059782
Query: 392 gg 393
||
Sbjct: 3059783 gg 3059784
Score = 127 bits (64), Expect = 2e-026
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||
Sbjct: 7222720 caggtcaccttctccaagcgccggcgcggcctgttcaagaaggccgaggagctctccgtg 7222779
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||| |||||||||||| ||||||||
Sbjct: 7222780 ctctgcgacgccgacgtcgcgctcatcgtcttctcc 7222815
Score = 99.6 bits (50), Expect = 4e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 533 aggcacttgcttggggaggaacttggcccactgagtgtgaaggagttgcagcagctagag 592
|||||||||||||||||||| ||||| ||||| || || || || ||||||||||| |||
Sbjct: 3064849 aggcacttgcttggggaggatcttggaccactcagcgtcaaagaattgcagcagctggag 3064908
Query: 593 aaacagctcgaatgtgctttgtcacaggcaagacagagaaag 634
|||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 3064909 aaacagcttgaatgtgcactatcacaggcgagacagagaaag 3064950
Score = 99.6 bits (50), Expect = 4e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 393 gcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3062542 gcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaa 3062599
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 3067158 gagaacaacttcatgctgggatgggttctttgag 3067191
Score = 50.1 bits (25), Expect = 0.003
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 471 agagctggtaccaggaaatgtcaaaactgagggcaaaattcgaggccttgcagcgcactc 530
|||| |||||||| ||||||||||| ||| |||||||| || || |||||||||||||
Sbjct: 3064556 agagttggtaccatgaaatgtcaaagttgaaagcaaaatttgaagctttgcagcgcactc 3064615
Query: 531 a 531
|
Sbjct: 3064616 a 3064616
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 14323299 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 14323358
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 14323359 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 14323418
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14323419 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 14323478
Query: 392 gg 393
||
Sbjct: 14323479 gg 14323480
Score = 127 bits (64), Expect = 2e-026
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||
Sbjct: 18646974 caggtcaccttctccaagcgccggcgcggcctgttcaagaaggccgaggagctctccgtg 18647033
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||| |||||||||||| ||||||||
Sbjct: 18647034 ctctgcgacgccgacgtcgcgctcatcgtcttctcc 18647069
Score = 99.6 bits (50), Expect = 4e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 533 aggcacttgcttggggaggaacttggcccactgagtgtgaaggagttgcagcagctagag 592
|||||||||||||||||||| ||||| ||||| || || || || ||||||||||| |||
Sbjct: 14328289 aggcacttgcttggggaggatcttggaccactcagcgtcaaagaattgcagcagctggag 14328348
Query: 593 aaacagctcgaatgtgctttgtcacaggcaagacagagaaag 634
|||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 14328349 aaacagcttgaatgtgcactatcacaggcgagacagagaaag 14328390
Score = 99.6 bits (50), Expect = 4e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 393 gcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 14325982 gcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaa 14326039
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 14330598 gagaacaacttcatgctgggatgggttctttgag 14330631
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||| || | ||||||||||||||||||| ||||| |||||||
Sbjct: 8654556 tcaagaaggccaaggagctggccatcctctgcgacgccgaggtcggcctcatgatcttct 8654615
Query: 357 ccagc 361
|||||
Sbjct: 8654616 ccagc 8654620
Score = 50.1 bits (25), Expect = 0.003
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 471 agagctggtaccaggaaatgtcaaaactgagggcaaaattcgaggccttgcagcgcactc 530
|||| |||||||| ||||||||||| ||| |||||||| || || |||||||||||||
Sbjct: 14327996 agagttggtaccatgaaatgtcaaagttgaaagcaaaatttgaagctttgcagcgcactc 14328055
Query: 531 a 531
|
Sbjct: 14328056 a 14328056
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 27776363 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 27776422
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 27776423 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 27776482
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27776483 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 27776542
Query: 392 gg 393
||
Sbjct: 27776543 gg 27776544
Score = 127 bits (64), Expect = 2e-026
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||
Sbjct: 32100038 caggtcaccttctccaagcgccggcgcggcctgttcaagaaggccgaggagctctccgtg 32100097
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||| |||||||||||| ||||||||
Sbjct: 32100098 ctctgcgacgccgacgtcgcgctcatcgtcttctcc 32100133
Score = 99.6 bits (50), Expect = 4e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 533 aggcacttgcttggggaggaacttggcccactgagtgtgaaggagttgcagcagctagag 592
|||||||||||||||||||| ||||| ||||| || || || || ||||||||||| |||
Sbjct: 27781353 aggcacttgcttggggaggatcttggaccactcagcgtcaaagaattgcagcagctggag 27781412
Query: 593 aaacagctcgaatgtgctttgtcacaggcaagacagagaaag 634
|||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 27781413 aaacagcttgaatgtgcactatcacaggcgagacagagaaag 27781454
Score = 99.6 bits (50), Expect = 4e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 393 gcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 27779046 gcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaa 27779103
Score = 71.9 bits (36), Expect = 9e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||| || ||||| |||||||| | || ||||| |||||||| | |||||| || |||
Sbjct: 208461 caggtgacgttctcgaagcgccggagtgggctgctgaagaaggcgttcgagctgtcggtg 208520
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
||||||||||||||||| || |||||| ||||||||
Sbjct: 208521 ctctgcgacgccgaggttgctctcatcgtcttctcc 208556
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 27783662 gagaacaacttcatgctgggatgggttctttgag 27783695
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||| || | ||||||||||||||||||| ||||| |||||||
Sbjct: 22107620 tcaagaaggccaaggagctggccatcctctgcgacgccgaggtcggcctcatgatcttct 22107679
Query: 357 ccagc 361
|||||
Sbjct: 22107680 ccagc 22107684
Score = 50.1 bits (25), Expect = 0.003
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 471 agagctggtaccaggaaatgtcaaaactgagggcaaaattcgaggccttgcagcgcactc 530
|||| |||||||| ||||||||||| ||| |||||||| || || |||||||||||||
Sbjct: 27781060 agagttggtaccatgaaatgtcaaagttgaaagcaaaatttgaagctttgcagcgcactc 27781119
Query: 531 a 531
|
Sbjct: 27781120 a 27781120
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 299 aagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||| |||||||| ||||||||||||||||| |||| || |||||||||||
Sbjct: 3924610 aagaaggcgaacgagctcgccgtgctctgcgacgcccgcgtcggcgtcgtcatcttctcc 3924551
Query: 359 agccgcggcaag 370
||| |||||||
Sbjct: 3924550 agcaccggcaag 3924539
Score = 46.1 bits (23), Expect = 0.049
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcg 329
|||||||||||||||| | || | ||||||||||| |||||| |||||||||||||
Sbjct: 3547905 cttctccaagcgccgcgagggagtcttcaagaaggccagcgagctgtccgtgctctgcg 3547963
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 289 bits (146), Expect = 2e-075
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 27894604 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 27894663
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 27894664 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 27894723
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27894724 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 27894783
Query: 392 gg 393
||
Sbjct: 27894784 gg 27894785
Score = 127 bits (64), Expect = 2e-026
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||
Sbjct: 32057721 caggtcaccttctccaagcgccggcgcggcctgttcaagaaggccgaggagctctccgtg 32057780
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||| |||||||||||| ||||||||
Sbjct: 32057781 ctctgcgacgccgacgtcgcgctcatcgtcttctcc 32057816
Score = 99.6 bits (50), Expect = 4e-018
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 533 aggcacttgcttggggaggaacttggcccactgagtgtgaaggagttgcagcagctagag 592
|||||||||||||||||||| ||||| ||||| || || || || ||||||||||| |||
Sbjct: 27899850 aggcacttgcttggggaggatcttggaccactcagcgtcaaagaattgcagcagctggag 27899909
Query: 593 aaacagctcgaatgtgctttgtcacaggcaagacagagaaag 634
|||||||| |||||||| | |||||||| ||||||||||||
Sbjct: 27899910 aaacagcttgaatgtgcactatcacaggcgagacagagaaag 27899951
Score = 99.6 bits (50), Expect = 4e-018
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 393 gcataacaaaaactttagaaaggtaccaacattgctgctacaatgctcaagattccaa 450
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 27897543 gcataacaaagactttagaaaggtaccaacattgttgctacaatgctcaagattccaa 27897600
Score = 71.9 bits (36), Expect = 9e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||| || ||||| |||||||| | || ||||| |||||||| | |||||| || |||
Sbjct: 199395 caggtgacgttctcgaagcgccggagtgggctgctgaagaaggcgttcgagctgtcggtg 199454
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctcc 358
||||||||||||||||| || |||||| ||||||||
Sbjct: 199455 ctctgcgacgccgaggttgctctcatcgtcttctcc 199490
Score = 67.9 bits (34), Expect = 1e-008
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 947 gagaacaacttcatgctgggatgggttctttgag 980
||||||||||||||||||||||||||||||||||
Sbjct: 27902159 gagaacaacttcatgctgggatgggttctttgag 27902192
Score = 58.0 bits (29), Expect = 1e-005
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||| || | ||||||||||||||||||| ||||| |||||||
Sbjct: 22314417 tcaagaaggccaaggagctggccatcctctgcgacgccgaggtcggcctcatgatcttct 22314476
Query: 357 ccagc 361
|||||
Sbjct: 22314477 ccagc 22314481
Score = 50.1 bits (25), Expect = 0.003
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 471 agagctggtaccaggaaatgtcaaaactgagggcaaaattcgaggccttgcagcgcactc 530
|||| |||||||| ||||||||||| ||| |||||||| || || |||||||||||||
Sbjct: 27899557 agagttggtaccatgaaatgtcaaagttgaaagcaaaatttgaagctttgcagcgcactc 27899616
Query: 531 a 531
|
Sbjct: 27899617 a 27899617
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 299 aagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||| |||||||| ||||||||||||||||| |||| || |||||||||||
Sbjct: 3836619 aagaaggcgaacgagctcgccgtgctctgcgacgcccgcgtcggcgtcgtcatcttctcc 3836560
Query: 359 agccgcggcaag 370
||| |||||||
Sbjct: 3836559 agcaccggcaag 3836548
Score = 46.1 bits (23), Expect = 0.049
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 271 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcg 329
|||||||||||||||| | || | ||||||||||| |||||| |||||||||||||
Sbjct: 3459565 cttctccaagcgccgcgagggagtcttcaagaaggccagcgagctgtccgtgctctgcg 3459623
>gb|D22380.1|D22380 RICC10934A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10934_1A, mRNA sequence
Length = 358
Score = 280 bits (141), Expect = 2e-072
Identities = 168/177 (94%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||||||
Sbjct: 111 atggggaggggaagagttgagctgaagcgcatcgagaacaagatcaacaggcaggtcacc 170
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 171 ttctccaagcgccgcaacggcctcctcaagaaggcctacgagctgtccgttctctgcgac 230
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 287
>dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057B01, full
insert sequence
Length = 963
Score = 252 bits (127), Expect = 4e-064
Identities = 172/187 (91%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 32 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 91
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 92 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 151
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 152 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 211
Query: 392 ggcataa 398
|| ||||
Sbjct: 212 ggaataa 218
>gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS213
mRNA, complete cds
Length = 1134
Score = 252 bits (127), Expect = 4e-064
Identities = 172/187 (91%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 138 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 197
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 198 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 257
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 258 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 317
Query: 392 ggcataa 398
|| ||||
Sbjct: 318 ggaataa 324
>ref|XM_473638.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 750
Score = 252 bits (127), Expect = 4e-064
Identities = 172/187 (91%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 1 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 60
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 61 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 120
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 121 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 180
Query: 392 ggcataa 398
|| ||||
Sbjct: 181 ggaataa 187
>gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010373, whole
genome shotgun sequence
Length = 17272
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Minus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 15066 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 15007
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 15006 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 14947
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 14946 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 14887
Query: 392 gg 393
||
Sbjct: 14886 gg 14885
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 3058313 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 3058372
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 3058373 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 3058432
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 3058433 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 3058492
Query: 392 gg 393
||
Sbjct: 3058493 gg 3058494
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 7086150 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 7086209
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 7086210 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 7086269
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 7086270 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 7086329
Query: 392 gg 393
||
Sbjct: 7086330 gg 7086331
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||| || ||||| ||||| |||||||| | ||||||||||| | ||||| || |
Sbjct: 891736 caggtgacgttctcgaagcggcgcaacgggatcttcaagaaggccaaggagctggccatc 891795
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
|| |||||||||||||||| ||| ||||||||||||||
Sbjct: 891796 ctgtgcgacgccgaggtcggcctcgtcatcttctccagc 891834
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 26230249 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 26230308
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 26230309 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 26230368
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 26230369 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 26230428
Query: 392 gg 393
||
Sbjct: 26230429 gg 26230430
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||| || ||||| ||||| |||||||| | ||||||||||| | ||||| || |
Sbjct: 20035835 caggtgacgttctcgaagcggcgcaacgggatcttcaagaaggccaaggagctggccatc 20035894
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
|| |||||||||||||||| ||| ||||||||||||||
Sbjct: 20035895 ctgtgcgacgccgaggtcggcctcgtcatcttctccagc 20035933
Score = 50.1 bits (25), Expect = 0.003
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| ||||||| |||| ||| ||||| ||||| |||||||| ||||| ||| ||| |
Sbjct: 11277275 tcaagaggatcgacaacacgatgaaccggcaggtgaccttctcgaagcggcgcggcgggc 11277334
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| | ||||||||| ||||| || | |||||||||||||| |||| ||||| |||
Sbjct: 11277335 tgatgaagaaggcccgggagctggccatcctctgcgacgccgacgtcggcctcattgtct 11277394
Query: 354 tctcc 358
|||||
Sbjct: 11277395 tctcc 11277399
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
complete sequence
Length = 149892
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 84618 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 84677
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 84678 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 84737
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 84738 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 84797
Query: 392 gg 393
||
Sbjct: 84798 gg 84799
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 250 bits (126), Expect = 2e-063
Identities = 168/182 (92%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
||||||||||| | |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 29281572 atggggaggggaagggttgagctgaagcgcatcgagaacaagatcaaccggcaggtcacc 29281631
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 29281632 ttctccaagcgccgcaacggcctcctcaagaaggcgtacgagctctccgtgctctgcgac 29281691
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgcc 391
|| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 29281692 gcggaggtggcgctcatcatcttctccagccgtggcaagctgtacgaattcggtagcgcc 29281751
Query: 392 gg 393
||
Sbjct: 29281752 gg 29281753
Score = 54.0 bits (27), Expect = 2e-004
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 263 caggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtg 322
||||| || ||||| ||||| |||||||| | ||||||||||| | ||||| || |
Sbjct: 23015098 caggtgacgttctcgaagcggcgcaacgggatcttcaagaaggccaaggagctggccatc 23015157
Query: 323 ctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
|| |||||||||||||||| ||| ||||||||||||||
Sbjct: 23015158 ctgtgcgacgccgaggtcggcctcgtcatcttctccagc 23015196
Score = 50.1 bits (25), Expect = 0.003
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| ||||||| |||| ||| ||||| ||||| |||||||| ||||| ||| ||| |
Sbjct: 13725284 tcaagaggatcgacaacacgatgaaccggcaggtgaccttctcgaagcggcgcggcgggc 13725343
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| | ||||||||| ||||| || | |||||||||||||| |||| ||||| |||
Sbjct: 13725344 tgatgaagaaggcccgggagctggccatcctctgcgacgccgacgtcggcctcattgtct 13725403
Query: 354 tctcc 358
|||||
Sbjct: 13725404 tctcc 13725408
>gb|AQ578837.1|AQ578837 nbxb0093F09f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0093F09f, DNA sequence
Length = 544
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Minus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 252 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 193
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 192 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 133
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 132 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 76
>dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063L04, full
insert sequence
Length = 1055
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 67 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 126
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 127 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 186
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 187 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 243
>gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) mRNA, complete cds
Length = 1078
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 99 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 158
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 159 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 218
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 219 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 275
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0702E04
Length = 190948
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 49616 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 49675
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 49676 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 49735
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 49736 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 49792
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 61010 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 61069
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 61070 gcccaggtcgccctcctcgtcttctcc 61096
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216
mRNA, complete cds
Length = 1265
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 234 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 293
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 294 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 353
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 354 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 410
>gb|AACV01018907.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018907, whole
genome shotgun sequence
Length = 31772
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 6030 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 6089
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 6090 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 6149
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 6150 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 6206
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 17425 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 17484
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 17485 gcccaggtcgccctcctcgtcttctcc 17511
>ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1056
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 68 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 127
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 128 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 187
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 188 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 244
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 26262662 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 26262721
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 26262722 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 26262781
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 26262782 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 26262838
Score = 81.8 bits (41), Expect = 9e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| |||||||||||| || ||| | ||||| || ||||| ||||| || ||||| |
Sbjct: 24148516 tcaagaggatcgagaacacgacgaacaggcaggtgacgttctcgaagcggcggaacgggc 24148457
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| |||||||||| |||||||| ||||||||||||||| ||| ||||| ||| |||| |
Sbjct: 24148456 tgatcaagaaggcgtacgagctgtccgtgctctgcgacatcgacgtcgccctcctcatgt 24148397
Query: 354 tctcc 358
|||||
Sbjct: 24148396 tctcc 24148392
Score = 81.8 bits (41), Expect = 9e-013
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 258 accgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctct 317
|||| ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||
Sbjct: 439743 accgtcaggtcaccttctgcaagcgccgtgccggcctgctgaagaaggccagggagctct 439802
Query: 318 ccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacg 377
|| | |||||||| ||||| ||| |||||||||||||| || ||||||||||||||
Sbjct: 439803 ccatcctctgcgaggccgacatcggcatcatcatcttctccgcccacggcaagctctacg 439862
Query: 378 a 378
|
Sbjct: 439863 a 439863
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 26274056 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 26274115
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 26274116 gcccaggtcgccctcctcgtcttctcc 26274142
Score = 46.1 bits (23), Expect = 0.049
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 311 gagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
||||||||| | |||||||| |||||||||| ||| || |||||||||||
Sbjct: 20661425 gagctctccatcctctgcgatgccgaggtcggcctcctcgtcttctccagc 20661375
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 17724011 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 17724070
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 17724071 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 17724130
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 17724131 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 17724187
Score = 81.8 bits (41), Expect = 9e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| |||||||||||| || ||| | ||||| || ||||| ||||| || ||||| |
Sbjct: 15622742 tcaagaggatcgagaacacgacgaacaggcaggtgacgttctcgaagcggcggaacgggc 15622683
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| |||||||||| |||||||| ||||||||||||||| ||| ||||| ||| |||| |
Sbjct: 15622682 tgatcaagaaggcgtacgagctgtccgtgctctgcgacatcgacgtcgccctcctcatgt 15622623
Query: 354 tctcc 358
|||||
Sbjct: 15622622 tctcc 15622618
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 17735406 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 17735465
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 17735466 gcccaggtcgccctcctcgtcttctcc 17735492
Score = 46.1 bits (23), Expect = 0.049
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 311 gagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
||||||||| | |||||||| |||||||||| ||| || |||||||||||
Sbjct: 12140760 gagctctccatcctctgcgatgccgaggtcggcctcctcgtcttctccagc 12140710
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 25326017 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 25326076
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 25326077 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 25326136
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 25326137 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 25326193
Score = 81.8 bits (41), Expect = 9e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| |||||||||||| || ||| | ||||| || ||||| ||||| || ||||| |
Sbjct: 23224748 tcaagaggatcgagaacacgacgaacaggcaggtgacgttctcgaagcggcggaacgggc 23224689
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| |||||||||| |||||||| ||||||||||||||| ||| ||||| ||| |||| |
Sbjct: 23224688 tgatcaagaaggcgtacgagctgtccgtgctctgcgacatcgacgtcgccctcctcatgt 23224629
Query: 354 tctcc 358
|||||
Sbjct: 23224628 tctcc 23224624
Score = 81.8 bits (41), Expect = 9e-013
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 258 accgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctct 317
|||| ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||
Sbjct: 674227 accgtcaggtcaccttctgcaagcgccgtgccggcctgctgaagaaggccagggagctct 674286
Query: 318 ccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacg 377
|| | |||||||| ||||| ||| |||||||||||||| || ||||||||||||||
Sbjct: 674287 ccatcctctgcgaggccgacatcggcatcatcatcttctccgcccacggcaagctctacg 674346
Query: 378 a 378
|
Sbjct: 674347 a 674347
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 25337412 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 25337471
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 25337472 gcccaggtcgccctcctcgtcttctcc 25337498
Score = 46.1 bits (23), Expect = 0.049
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 311 gagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
||||||||| | |||||||| |||||||||| ||| || |||||||||||
Sbjct: 19742766 gagctctccatcctctgcgatgccgaggtcggcctcctcgtcttctccagc 19742716
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 224 bits (113), Expect = 1e-055
Identities = 161/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||| ||
Sbjct: 26500749 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcaggtgacg 26500808
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 26500809 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 26500868
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 26500869 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 26500925
Score = 81.8 bits (41), Expect = 9e-013
Identities = 104/125 (83%)
Strand = Plus / Minus
Query: 234 tcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 293
||||| |||||||||||| || ||| | ||||| || ||||| ||||| || ||||| |
Sbjct: 24386603 tcaagaggatcgagaacacgacgaacaggcaggtgacgttctcgaagcggcggaacgggc 24386544
Query: 294 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 353
|| |||||||||| |||||||| ||||||||||||||| ||| ||||| ||| |||| |
Sbjct: 24386543 tgatcaagaaggcgtacgagctgtccgtgctctgcgacatcgacgtcgccctcctcatgt 24386484
Query: 354 tctcc 358
|||||
Sbjct: 24386483 tctcc 24386479
Score = 81.8 bits (41), Expect = 9e-013
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 258 accgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctct 317
|||| ||||||||||||| ||||||||| ||||||||| ||||||||| |||||||
Sbjct: 673317 accgtcaggtcaccttctgcaagcgccgtgccggcctgctgaagaaggccagggagctct 673376
Query: 318 ccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacg 377
|| | |||||||| ||||| ||| |||||||||||||| || ||||||||||||||
Sbjct: 673377 ccatcctctgcgaggccgacatcggcatcatcatcttctccgcccacggcaagctctacg 673436
Query: 378 a 378
|
Sbjct: 673437 a 673437
Score = 77.8 bits (39), Expect = 1e-011
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||||| ||||| || | ||| ||| |||||||||| |||||||| |||||||||||||||
Sbjct: 26512143 ttctcgaagcggcggagcgggctgttcaagaaggcgtacgagctgtccgtgctctgcgac 26512202
Query: 332 gccgaggtcgcgctcatcatcttctcc 358
||| ||||||| ||| || ||||||||
Sbjct: 26512203 gcccaggtcgccctcctcgtcttctcc 26512229
Score = 46.1 bits (23), Expect = 0.049
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 311 gagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
||||||||| | |||||||| |||||||||| ||| || |||||||||||
Sbjct: 20899512 gagctctccatcctctgcgatgccgaggtcggcctcctcgtcttctccagc 20899462
>gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL6)
mRNA, complete cds
Length = 1025
Score = 216 bits (109), Expect = 2e-053
Identities = 160/177 (90%)
Strand = Plus / Plus
Query: 212 atggggaggggtcgagttgagctcaagcggatcgagaacaagatcaaccgccaggtcacc 271
|||||||||||||| || ||||| ||| |||||||||||||||||||||| | ||| ||
Sbjct: 49 atggggaggggtcgggtggagctgaagaggatcgagaacaagatcaaccggcgggtgacg 108
Query: 272 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 331
||| |||||||| | || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 109 ttcgccaagcgcaggaatggcctgctcaagaaggcgtacgagctctccgtcctctgcgac 168
Query: 332 gccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagc 388
||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 169 gccgaggtcgccctcatcatcttctccaaccgcggcaagctctacgagttctgcagc 225
>emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein
Length = 1003
Score = 204 bits (103), Expect = 9e-050
Identities = 145/159 (91%)
Strand = Plus / Plus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| ||| |||||||||||||||||||||| ||||| || ||| |||||||| | ||
Sbjct: 21 gagctgaagaggatcgagaacaagatcaaccggcaggtgacgttcgccaagcgcaggaat 80
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 81 ggcctgctcaagaaggcgtacgagctctccgtcctctgcgacgccgaggtcgccctcatc 140
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagc 388
|||||||||| |||||||||||||||||||||| |||||
Sbjct: 141 atcttctccaaccgcggcaagctctacgagttctgcagc 179
>gb|CF297258.1|CF297258 30DGS--07-P17.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--07-P17, mRNA sequence
Length = 535
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 222 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 281
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 282 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 341
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 342 attcgccagcgcc 354
>dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:S11905
Length = 1095
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 211 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 270
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 271 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 330
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 331 attcgccagcgcc 343
>dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C22, full
insert sequence
Length = 1117
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 231 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 290
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 291 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 350
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 351 attcgccagcgcc 363
>dbj|AK104921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-H02, full
insert sequence
Length = 1016
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 123 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 182
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 183 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 242
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 243 attcgccagcgcc 255
>gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL20)
mRNA, complete cds
Length = 875
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 118 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 177
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 178 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 237
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 238 attcgccagcgcc 250
Score = 69.9 bits (35), Expect = 3e-009
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcc 293
|||||||||||||||||||||||||||||||||||
Sbjct: 36 ccgccaggtcaccttctccaagcgccgcaacggcc 70
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12,
complete sequence
Length = 146241
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 84496 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 84437
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 84436 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 84377
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 84376 attcgccagcgcc 84364
>gb|AY551915.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS210
mRNA, complete cds
Length = 583
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 194
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 195 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 254
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 255 attcgccagcgcc 267
>gb|AACV01005781.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005781, whole
genome shotgun sequence
Length = 17803
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 17437 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 17378
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 17377 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 17318
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 17317 attcgccagcgcc 17305
>ref|XM_468584.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 351
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 48 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 107
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 108 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 167
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 168 attcgccagcgcc 180
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1279592 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 1279533
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1279532 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 1279473
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 1279472 attcgccagcgcc 1279460
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1283332 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 1283273
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1283272 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 1283213
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 1283212 attcgccagcgcc 1283200
Score = 178 bits (90), Expect = 5e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||||||||||||||||| ||| ||||| || ||| |||||||| | |||
Sbjct: 6063327 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaac 6063268
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 6063267 ggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatc 6063208
Query: 350 atcttctccagccgcggc 367
||||||||| ||||||||
Sbjct: 6063207 atcttctccggccgcggc 6063190
Score = 67.9 bits (34), Expect = 1e-008
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||||||| | ||||||||||||||||||| |||| || ||||||
Sbjct: 4485805 tcaagaaggccgaggagctctccatcctctgcgacgccgaggtcgggctcgtcgtcttct 4485746
Query: 357 ccagccgcggcaagctct 374
|| | |||||||||||
Sbjct: 4485745 ccgccaccggcaagctct 4485728
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1475694 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 1475635
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1475634 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 1475575
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 1475574 attcgccagcgcc 1475562
Score = 178 bits (90), Expect = 5e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||||||||||||||||| ||| ||||| || ||| |||||||| | |||
Sbjct: 6255689 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaac 6255630
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 6255629 ggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatc 6255570
Query: 350 atcttctccagccgcggc 367
||||||||| ||||||||
Sbjct: 6255569 atcttctccggccgcggc 6255552
Score = 163 bits (82), Expect = 3e-037
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 231 agctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacg 290
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||| | |
Sbjct: 31668537 agctgaagcggatcgagaacaagatcaaccggcaggtgaccttctccaagcgcaggtcgg 31668478
Query: 291 gcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatca 350
| |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 31668477 ggctgctcaagaaggcgaatgagatctccgtgctctgcgacgccgaggtcgcgctcatca 31668418
Query: 351 tcttctccagccgcggcaagctctacgagt 380
||||||||| | ||||||||||||||||
Sbjct: 31668417 tcttctccaccaagggcaagctctacgagt 31668388
Score = 147 bits (74), Expect = 2e-032
Identities = 110/122 (90%)
Strand = Plus / Minus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| || ||| ||||||| || ||||||||||
Sbjct: 31682005 agcggatcgagaacaagatcagccggcaggtgacgttcgccaagcggcggaacggcctgc 31681946
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||| ||| || ||||||
Sbjct: 31681945 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgccctcgtcctcttct 31681886
Query: 357 cc 358
||
Sbjct: 31681885 cc 31681884
Score = 67.9 bits (34), Expect = 1e-008
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||||||| | ||||||||||||||||||| |||| || ||||||
Sbjct: 4678167 tcaagaaggccgaggagctctccatcctctgcgacgccgaggtcgggctcgtcgtcttct 4678108
Query: 357 ccagccgcggcaagctct 374
|| | |||||||||||
Sbjct: 4678107 ccgccaccggcaagctct 4678090
Score = 52.0 bits (26), Expect = 8e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 299 aagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||||||| || | |||||||| || ||| ||| || ||||||||||||
Sbjct: 35750441 aagaaggcctacgagctcgccttactctgcgatgctgagatcggactgatcatcttctcc 35750500
Query: 359 ag 360
||
Sbjct: 35750501 ag 35750502
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1279592 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 1279533
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1279532 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 1279473
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 1279472 attcgccagcgcc 1279460
Score = 178 bits (90), Expect = 5e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||||||||||||||||| ||| ||||| || ||| |||||||| | |||
Sbjct: 6028750 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaac 6028691
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 6028690 ggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatc 6028631
Query: 350 atcttctccagccgcggc 367
||||||||| ||||||||
Sbjct: 6028630 atcttctccggccgcggc 6028613
Score = 163 bits (82), Expect = 3e-037
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 231 agctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacg 290
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||| | |
Sbjct: 30840202 agctgaagcggatcgagaacaagatcaaccggcaggtgaccttctccaagcgcaggtcgg 30840143
Query: 291 gcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatca 350
| |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30840142 ggctgctcaagaaggcgaatgagatctccgtgctctgcgacgccgaggtcgcgctcatca 30840083
Query: 351 tcttctccagccgcggcaagctctacgagt 380
||||||||| | ||||||||||||||||
Sbjct: 30840082 tcttctccaccaagggcaagctctacgagt 30840053
Score = 147 bits (74), Expect = 2e-032
Identities = 110/122 (90%)
Strand = Plus / Minus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| || ||| ||||||| || ||||||||||
Sbjct: 30853669 agcggatcgagaacaagatcagccggcaggtgacgttcgccaagcggcggaacggcctgc 30853610
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||| ||| || ||||||
Sbjct: 30853609 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgccctcgtcctcttct 30853550
Query: 357 cc 358
||
Sbjct: 30853549 cc 30853548
Score = 67.9 bits (34), Expect = 1e-008
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||||||| | ||||||||||||||||||| |||| || ||||||
Sbjct: 4507119 tcaagaaggccgaggagctctccatcctctgcgacgccgaggtcgggctcgtcgtcttct 4507060
Query: 357 ccagccgcggcaagctct 374
|| | |||||||||||
Sbjct: 4507059 ccgccaccggcaagctct 4507042
Score = 52.0 bits (26), Expect = 8e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 299 aagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||||||| || | |||||||| || ||| ||| || ||||||||||||
Sbjct: 34848774 aagaaggcctacgagctcgccttactctgcgatgctgagatcggactgatcatcttctcc 34848833
Query: 359 ag 360
||
Sbjct: 34848834 ag 34848835
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 200 bits (101), Expect = 1e-048
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1279594 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 1279535
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1279534 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcggcaagctctacga 1279475
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 1279474 attcgccagcgcc 1279462
Score = 178 bits (90), Expect = 5e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| |||||||||||||||||||||| ||| ||||| || ||| |||||||| | |||
Sbjct: 6029537 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgcaggaac 6029478
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 6029477 ggcctgctcaagaaggcctacgagctctccctcctctgcgacgccgaggtcgccctcatc 6029418
Query: 350 atcttctccagccgcggc 367
||||||||| ||||||||
Sbjct: 6029417 atcttctccggccgcggc 6029400
Score = 163 bits (82), Expect = 3e-037
Identities = 133/150 (88%)
Strand = Plus / Minus
Query: 231 agctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacg 290
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||| | |
Sbjct: 30748779 agctgaagcggatcgagaacaagatcaaccggcaggtgaccttctccaagcgcaggtcgg 30748720
Query: 291 gcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatca 350
| |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30748719 ggctgctcaagaaggcgaatgagatctccgtgctctgcgacgccgaggtcgcgctcatca 30748660
Query: 351 tcttctccagccgcggcaagctctacgagt 380
||||||||| | ||||||||||||||||
Sbjct: 30748659 tcttctccaccaagggcaagctctacgagt 30748630
Score = 147 bits (74), Expect = 2e-032
Identities = 110/122 (90%)
Strand = Plus / Minus
Query: 237 agcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgc 296
||||||||||||||||||||| ||| ||||| || ||| ||||||| || ||||||||||
Sbjct: 30762246 agcggatcgagaacaagatcagccggcaggtgacgttcgccaagcggcggaacggcctgc 30762187
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||||||||||||||| | |||||||||||||||||||| ||| || ||||||
Sbjct: 30762186 tcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgccctcgtcctcttct 30762127
Query: 357 cc 358
||
Sbjct: 30762126 cc 30762125
Score = 67.9 bits (34), Expect = 1e-008
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 297 tcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttct 356
||||||||||| | ||||||||| | ||||||||||||||||||| |||| || ||||||
Sbjct: 4507004 tcaagaaggccgaggagctctccatcctctgcgacgccgaggtcgggctcgtcgtcttct 4506945
Query: 357 ccagccgcggcaagctct 374
|| | |||||||||||
Sbjct: 4506944 ccgccaccggcaagctct 4506927
Score = 52.0 bits (26), Expect = 8e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 299 aagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctcc 358
|||||||||||||||||| || | |||||||| || ||| ||| || ||||||||||||
Sbjct: 34758702 aagaaggcctacgagctcgccttactctgcgatgctgagatcggactgatcatcttctcc 34758761
Query: 359 ag 360
||
Sbjct: 34758762 ag 34758763
>gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0886, mRNA sequence
Length = 502
Score = 196 bits (99), Expect = 2e-047
Identities = 135/147 (91%)
Strand = Plus / Plus
Query: 242 atcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctgctcaag 301
|||||||||||||||||||| ||||| || ||| |||||||| | || ||||||||||||
Sbjct: 16 atcgagaacaagatcaaccggcaggtgacgttcgccaagcgcaggaatggcctgctcaag 75
Query: 302 aaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttctccagc 361
||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct: 76 aaggcgtacgagctctccgtcctctgcgacgccgaggtcgccctcatcatcttctccaac 135
Query: 362 cgcggcaagctctacgagttcggcagc 388
||||||||||||||||||||| |||||
Sbjct: 136 cgcggcaagctctacgagttctgcagc 162
>gb|CF294135.1|CF294135 30DGS--03-I23.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-I23, mRNA sequence
Length = 376
Score = 184 bits (93), Expect = 8e-044
Identities = 123/133 (92%)
Strand = Plus / Plus
Query: 259 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctc 318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 239 ccgccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggccttcgagctctc 298
Query: 319 cgtgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacga 378
||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 299 cgtcctctgcgacgccgaggtcgcgctcatcgtcttctccccgcgcgggcagctctacga 358
Query: 379 gttcggcagcgcc 391
|||| |||||||
Sbjct: 359 attcgccagcgcc 371
>gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8) mRNA, complete cds
Length = 1179
Score = 182 bits (92), Expect = 3e-043
Identities = 143/160 (89%)
Strand = Plus / Plus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| ||| |||||||||||||||||||| | ||||| || ||| | ||||| | ||
Sbjct: 127 gagctgaagaggatcgagaacaagatcaacaggcaggtgacgttcgcgaagcggaggaat 186
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 187 gggctgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgccctcatc 246
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcg 389
|||||||||| |||||||||||||||||||||| ||||||
Sbjct: 247 atcttctccaaccgcggcaagctctacgagttctgcagcg 286
>dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143P16, full
insert sequence
Length = 1203
Score = 182 bits (92), Expect = 3e-043
Identities = 143/160 (89%)
Strand = Plus / Plus
Query: 230 gagctcaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 289
||||| ||| |||||||||||||||||||| | ||||| || ||| | ||||| | ||
Sbjct: 129 gagctgaagaggatcgagaacaagatcaacaggcaggtgacgttcgcgaagcggaggaat 188
Query: 290 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 349
|| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 189 gggctgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgccctcatc 248
Query: 350 atcttctccagccgcggcaagctctacgagttcggcagcg 389
|||||||||| |||||||||||||||||||||| ||||||
Sbjct: 249 atcttctccaaccgcggcaagctctacgagttctgcagcg 288
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,912,726
Number of Sequences: 438736
Number of extensions: 1912726
Number of successful extensions: 12444
Number of sequences better than 0.5: 343
Number of HSP's better than 0.5 without gapping: 390
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 9577
Number of HSP's gapped (non-prelim): 2787
length of query: 1331
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1310
effective length of database: 2,791,206,460
effective search space: 3656480462600
effective search space used: 3656480462600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)