BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750663.2.1
(1282 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 ... 365 4e-098
gb|AACV01007572.1| Oryza sativa (japonica cultivar-group) c... 365 4e-098
ref|XM_469178.1| Oryza sativa (japonica cultivar-group), mRNA 365 4e-098
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 365 4e-098
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 365 4e-098
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 365 4e-098
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 365 4e-098
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 365 4e-098
gb|CZ559040.1|CZ559040 M0052886 AS_TRIM_TDNA_B1 Oryza sativ... 218 6e-054
gb|CF305010.1|CF305010 ABF1--06-I18.g1 ABF3-overexpressing ... 168 5e-039
gb|CF303622.1|CF303622 ABF1--02-M10.g1 ABF3-overexpressing ... 161 1e-036
gb|CF304381.1|CF304381 ABF1--04-N04.g1 ABF3-overexpressing ... 151 1e-033
gb|CF304251.1|CF304251 ABF1--04-H14.g1 ABF3-overexpressing ... 145 7e-032
gb|CF304844.1|CF304844 ABF1--06-B13.g1 ABF3-overexpressing ... 101 9e-019
gb|C28076.1|C28076 C28076 Rice callus cDNA Oryza sativa (ja... 96 6e-017
dbj|AP004789.3| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
dbj|AP005778.3| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|AACV01004078.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
ref|XM_465291.1| Oryza sativa (japonica cultivar-group), mRNA 76 5e-011
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 76 5e-011
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete
sequence
Length = 140720
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Plus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 86858 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 86917
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 86918 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 86977
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 86978 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 87037
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 87038 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 87097
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 87098 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 87157
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 87158 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 87217
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 87218 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 87277
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 87278 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 87337
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 87338 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 87397
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 87398 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 87457
Query: 751 ccct 754
||||
Sbjct: 87458 ccct 87461
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Plus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 87598 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 87657
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 87658 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 87717
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 87718 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 87777
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 87778 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 87837
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 87838 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 87897
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 87898 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 87957
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 87958 gcacatggcataactgttgactgaactat 87986
>gb|AACV01007572.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007572, whole
genome shotgun sequence
Length = 22797
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Plus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 15115 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 15174
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 15175 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 15234
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 15235 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 15294
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 15295 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 15354
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 15355 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 15414
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 15415 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 15474
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 15475 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 15534
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 15535 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 15594
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 15595 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 15654
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 15655 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 15714
Query: 751 ccct 754
||||
Sbjct: 15715 ccct 15718
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Plus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 15855 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 15914
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 15915 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 15974
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 15975 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 16034
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 16035 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 16094
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 16095 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 16154
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 16155 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 16214
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 16215 gcacatggcataactgttgactgaactat 16243
>ref|XM_469178.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 5415
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 5176 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 5117
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 5116 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 5057
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 5056 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 4997
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 4996 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 4937
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 4936 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 4877
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 4876 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 4817
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 4816 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 4757
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 4756 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 4697
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 4696 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 4637
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 4636 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 4577
Query: 751 ccct 754
||||
Sbjct: 4576 ccct 4573
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 4436 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 4377
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 4376 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 4317
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 4316 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 4257
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 4256 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 4197
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 4196 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 4137
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 4136 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 4077
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 4076 gcacatggcataactgttgactgaactat 4048
>ref|NT_107185.1| Oryza sativa (japonica cultivar-group)
Length = 1133266
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 1046409 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 1046350
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 1046349 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 1046290
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 1046289 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 1046230
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 1046229 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 1046170
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 1046169 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 1046110
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 1046109 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 1046050
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 1046049 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 1045990
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 1045989 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 1045930
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 1045929 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 1045870
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 1045869 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 1045810
Query: 751 ccct 754
||||
Sbjct: 1045809 ccct 1045806
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 1045669 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 1045610
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 1045609 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 1045550
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 1045549 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 1045490
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 1045489 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 1045430
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 1045429 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 1045370
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 1045369 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 1045310
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 1045309 gcacatggcataactgttgactgaactat 1045281
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 12531211 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 12531152
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 12531151 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 12531092
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 12531091 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 12531032
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 12531031 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 12530972
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 12530971 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 12530912
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 12530911 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 12530852
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 12530851 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 12530792
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 12530791 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 12530732
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 12530731 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 12530672
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 12530671 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 12530612
Query: 751 ccct 754
||||
Sbjct: 12530611 ccct 12530608
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 12530471 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 12530412
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 12530411 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 12530352
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 12530351 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 12530292
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 12530291 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 12530232
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 12530231 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 12530172
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 12530171 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 12530112
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 12530111 gcacatggcataactgttgactgaactat 12530083
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 26581918 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 26581859
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 26581858 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 26581799
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 26581798 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 26581739
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 26581738 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 26581679
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 26581678 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 26581619
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 26581618 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 26581559
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 26581558 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 26581499
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 26581498 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 26581439
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 26581438 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 26581379
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 26581378 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 26581319
Query: 751 ccct 754
||||
Sbjct: 26581318 ccct 26581315
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 26581178 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 26581119
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 26581118 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 26581059
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 26581058 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 26580999
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 26580998 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 26580939
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 26580938 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 26580879
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 26580878 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 26580819
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 26580818 gcacatggcataactgttgactgaactat 26580790
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 26012371 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 26012312
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 26012311 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 26012252
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 26012251 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 26012192
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 26012191 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 26012132
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 26012131 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 26012072
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 26012071 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 26012012
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 26012011 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 26011952
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 26011951 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 26011892
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 26011891 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 26011832
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 26011831 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 26011772
Query: 751 ccct 754
||||
Sbjct: 26011771 ccct 26011768
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 26011631 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 26011572
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 26011571 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 26011512
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 26011511 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 26011452
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 26011451 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 26011392
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 26011391 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 26011332
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 26011331 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 26011272
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 26011271 gcacatggcataactgttgactgaactat 26011243
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 365 bits (184), Expect = 4e-098
Identities = 499/604 (82%)
Strand = Plus / Minus
Query: 151 tgggccctcttgggctaccggtgctgctctgttgctcgtactcctggcttggaaaaacat 210
|||| ||||| |||||||||| ||||| || ||||| |||||||||||||| |||||||
Sbjct: 25921062 tgggtcctctcgggctaccggcactgctgtgctgctcatactcctggcttgggaaaacat 25921003
Query: 211 caggcagcagactagccgagatgttgtgcgcgtgaagccacgtcagctcccacaggctgt 270
||| | ||| ||| | ||||||||| | ||| |||||||| |||| |||||||| |||||
Sbjct: 25921002 cagactgcaaactcgtcgagatgttattcgcatgaagccatgtcaactcccacaagctgt 25920943
Query: 271 cgcccccgatcgtgctcctcttcgcaaggatgcccttgctcttcatcacgagcagaatgt 330
||||||| || ||||||||||| || ||||| ||| || |||||||| | | |||||||
Sbjct: 25920942 cgcccccaatggtgctcctctttgcgaggatccccctgttcttcatcgcaattagaatgt 25920883
Query: 331 tcttgagcaggtccgggaccacctcctgcagccggtcgctccgcttgcctcggaccttga 390
|||||||||| || |||| || ||| |||||| |||||| |||||||| ||||||||||
Sbjct: 25920882 tcttgagcagctcagggatcagctcttgcagcttgtcgctgcgcttgccacggaccttga 25920823
Query: 391 ccttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgctta 450
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| |||||||
Sbjct: 25920822 tcttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgctta 25920763
Query: 451 ggccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagca 510
| || ||||| || |||| || || || || |||||||| || || |||||||||||||
Sbjct: 25920762 gcccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagca 25920703
Query: 511 caagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagca 570
|||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || |
Sbjct: 25920702 caagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagta 25920643
Query: 571 aatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccacgtcgcggactgga 630
| ||||| |||| | |||||||||||| || || ||||| ||||| || | | ||| |
Sbjct: 25920642 agtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccatgtggagctctgaa 25920583
Query: 631 ggcagagttctcccgtggatgttaggcatcgctggagagaagccagcgcatggtttcgca 690
|||| | || | || | ||||||||||||||| || |||| ||||| || |||| ||
Sbjct: 25920582 ggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagcgcgtgatttctca 25920523
Query: 691 cctcctccctctgatccaggctcagtttcttcagtgcttgcagcagcctgagccacatct 750
||||||| |||||||||| |||| || |||||||||||||||| ||||||||||||
Sbjct: 25920522 cctcctctctctgatccaaactcaactttttcagtgcttgcagcaatttgagccacatct 25920463
Query: 751 ccct 754
||||
Sbjct: 25920462 ccct 25920459
Score = 311 bits (157), Expect = 5e-082
Identities = 331/389 (85%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 25920322 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 25920263
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 25920262 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 25920203
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 25920202 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 25920143
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 25920142 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 25920083
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 25920082 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 25920023
Query: 1194 ttgtatggtagcaacctctggcatatcctcaggagtccaaaaatagctttctccacgaga 1253
|| ||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||
Sbjct: 25920022 ttatatggtaataacctctggcatatgcgcagaagtccaaaaatagctttctccacaaga 25919963
Query: 1254 gcacacggcataactgtggactgaactat 1282
||||| ||||||||||| |||||||||||
Sbjct: 25919962 gcacatggcataactgttgactgaactat 25919934
>gb|CZ559040.1|CZ559040 M0052886 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0052886, DNA sequence
Length = 386
Score = 218 bits (110), Expect = 6e-054
Identities = 260/310 (83%)
Strand = Plus / Plus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 75 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 134
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 135 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 194
Query: 1014 gtaatggagagcagcaatattactgttctccagcccatctgtgactttatatgtgccgca 1073
|||||||||||||| || | ||| |||||||||||||| ||||| |||| ||| | |||
Sbjct: 195 gtaatggagagcagtaacactacagttctccagcccatttgtgattttacgtgtccagca 254
Query: 1074 tttgctttgacgagccgtgcaacctcctgtgtgatgttctcacaatacgcatctgctacc 1133
||||||||||| || |||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 255 tttgctttgacaaggcgtgcaacctcctgagtgatgttttcacagtatgcatctgctaca 314
Query: 1134 cgtgcgtcgagcttgagaactaactgcaacgacctcagtaattcatcagcaagattctcc 1193
|| || || |||||||||||||| ||||| |||||||| | ||||| ||||| |||||
Sbjct: 315 cgcgcatccagcttgagaactaattgcaatgacctcagcagctcatccgcaaggttctct 374
Query: 1194 ttgtatggta 1203
|| |||||||
Sbjct: 375 ttatatggta 384
>gb|CF305010.1|CF305010 ABF1--06-I18.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--06-I18, mRNA sequence
Length = 643
Score = 168 bits (85), Expect = 5e-039
Identities = 190/225 (84%)
Strand = Plus / Minus
Query: 392 cttgacgtacttctccatccggctcaggacccccagccacagcttgcagaaactgcttag 451
||||| |||||||||||||||||| ||||| || ||||||| ||||||||| ||||||||
Sbjct: 643 cttgatgtacttctccatccggctgaggactcctagccacaacttgcagaagctgcttag 584
Query: 452 gccgaaaaggtccggcaagagctggaggtataccttcgcaaccagcttcatggcgagcac 511
|| ||||| || |||| || || || || |||||||| || || ||||||||||||||
Sbjct: 583 cccaaaaagatctggcagtagttgcagatagaccttcgcgactagtttcatggcgagcac 524
Query: 512 aagtgacccttccatgtttctgtagtccttctgggagtggttctggctgatctccagcaa 571
||| || ||||||||||| |||||||||||||| ||||| |||||||||||||| || ||
Sbjct: 523 aagggatccttccatgttcctgtagtccttctgcgagtgattctggctgatctctagtaa 464
Query: 572 atcatcgagcaaggagaatatgacgaggtcaaaggcatgggacca 616
||||| |||| | |||||||||||| || || ||||| |||||
Sbjct: 463 gtcatccagcagcgcgaatatgacgagatcgaaagcatgtgacca 419
Score = 101 bits (51), Expect = 9e-019
Identities = 114/135 (84%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 142 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 83
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 82 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 23
Query: 1014 gtaatggagagcagc 1028
|||||||||||||||
Sbjct: 22 gtaatggagagcagc 8
Score = 81.8 bits (41), Expect = 9e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 650 tgttaggcatcgctggagagaagccagcgcatggtttcgcacctcctccctctgatccag 709
||||||||||||||| || |||| ||||| || |||| ||||||||| ||||||||||
Sbjct: 383 tgttaggcatcgctgaagcgaagttagcgcgtgatttctcacctcctctctctgatccaa 324
Query: 710 gctcagtttcttcagtgcttgcagcagcctgagccacatctccct 754
|||| || |||||||||||||||| ||||||||||||||||
Sbjct: 323 actcaactttttcagtgcttgcagcaatttgagccacatctccct 279
>gb|CF303622.1|CF303622 ABF1--02-M10.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-M10, mRNA sequence
Length = 602
Score = 161 bits (81), Expect = 1e-036
Identities = 261/321 (81%)
Strand = Plus / Minus
Query: 434 cttgcagaaactgcttaggccgaaaaggtccggcaagagctggaggtataccttcgcaac 493
||||||||| |||||||| || ||||| || |||| || || || || |||||||| ||
Sbjct: 598 cttgcagaagctgcttagcccaaaaagatctggcagtagttgcagatagaccttcgcgac 539
Query: 494 cagcttcatggcgagcacaagtgacccttccatgtttctgtagtccttctgggagtggtt 553
|| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||| ||
Sbjct: 538 tagtttcatggcgagcacaagggatccttccatgttcctgtagtccttctgcgagtgatt 479
Query: 554 ctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatggga 613
|||||||||||| || || ||||| |||| | |||||||||||| || || ||||| ||
Sbjct: 478 ctggctgatctctagtaagtcatccagcagcgcgaatatgacgagatcgaaagcatgtga 419
Query: 614 ccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagc 673
||| || | | ||| ||||| | || | || | ||||||||||||||| || ||||
Sbjct: 418 ccatgtggagctctgaaggcacaccccttctgttgctgttaggcatcgctgaagcgaagt 359
Query: 674 cagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcag 733
||||| || |||| ||||||||| |||||||||| |||| || ||||||||||||||
Sbjct: 358 tagcgcgtgatttctcacctcctctctctgatccaaactcaactttttcagtgcttgcag 299
Query: 734 cagcctgagccacatctccct 754
|| ||||||||||||||||
Sbjct: 298 caatttgagccacatctccct 278
Score = 85.7 bits (43), Expect = 5e-014
Identities = 113/135 (83%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 141 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 82
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 81 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 22
Query: 1014 gtaatggagagcagc 1028
|||| ||||||||||
Sbjct: 21 gtaa-ggagagcagc 8
>gb|CF304381.1|CF304381 ABF1--04-N04.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-N04, mRNA sequence
Length = 568
Score = 151 bits (76), Expect = 1e-033
Identities = 223/272 (81%)
Strand = Plus / Minus
Query: 483 accttcgcaaccagcttcatggcgagcacaagtgacccttccatgtttctgtagtccttc 542
|||||||| || || ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 552 accttcgcgactagtttcatggcgagcacaagggatccttccatgttcctgtagtccttc 493
Query: 543 tgggagtggttctggctgatctccagcaaatcatcgagcaaggagaatatgacgaggtca 602
|| ||||| |||||||||||||| || || ||||| |||| | |||||||||||| ||
Sbjct: 492 tgcgagtgattctggctgatctctagtaagtcatccagcagcgcgaatatgacgagatcg 433
Query: 603 aaggcatgggaccacgtcgcggactggaggcagagttctcccgtggatgttaggcatcgc 662
|| ||||| ||||| || | | ||| ||||| | || | || | |||||||||||||
Sbjct: 432 aaagcatgtgaccatgtggagctctgaaggcacaccccttctgttgctgttaggcatcgc 373
Query: 663 tggagagaagccagcgcatggtttcgcacctcctccctctgatccaggctcagtttcttc 722
|| || |||| ||||| || |||| ||||||||| |||||||||| |||| || |||
Sbjct: 372 tgaagcgaagttagcgcgtgatttctcacctcctctctctgatccaaactcaactttttc 313
Query: 723 agtgcttgcagcagcctgagccacatctccct 754
||||||||||||| ||||||||||||||||
Sbjct: 312 agtgcttgcagcaatttgagccacatctccct 281
Score = 85.7 bits (43), Expect = 5e-014
Identities = 113/135 (83%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 144 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 85
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 84 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 25
Query: 1014 gtaatggagagcagc 1028
|||| ||||||||||
Sbjct: 24 gtaa-ggagagcagc 11
>gb|CF304251.1|CF304251 ABF1--04-H14.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-H14, mRNA sequence
Length = 545
Score = 145 bits (73), Expect = 7e-032
Identities = 211/257 (82%)
Strand = Plus / Minus
Query: 498 ttcatggcgagcacaagtgacccttccatgtttctgtagtccttctgggagtggttctgg 557
||||||||||||||||| || ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 535 ttcatggcgagcacaagggatccttccatgttcctgtagtccttctgcgagtgattctgg 476
Query: 558 ctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatgggaccac 617
|||||||| || || ||||| |||| | |||||||||||| || || ||||| |||||
Sbjct: 475 ctgatctctagtaagtcatccagcagcgcgaatatgacgagatcgaaagcatgtgaccat 416
Query: 618 gtcgcggactggaggcagagttctcccgtggatgttaggcatcgctggagagaagccagc 677
|| | | ||| ||||| | || | || | ||||||||||||||| || |||| |||
Sbjct: 415 gtggagctctgaaggcacaccccttctgttgctgttaggcatcgctgaagcgaagttagc 356
Query: 678 gcatggtttcgcacctcctccctctgatccaggctcagtttcttcagtgcttgcagcagc 737
|| || |||| ||||||||| |||||||||| |||| || ||||||||||||||||
Sbjct: 355 gcgtgatttctcacctcctctctctgatccaaactcaactttttcagtgcttgcagcaat 296
Query: 738 ctgagccacatctccct 754
||||||||||||||||
Sbjct: 295 ttgagccacatctccct 279
Score = 101 bits (51), Expect = 9e-019
Identities = 114/135 (84%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 142 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 83
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 82 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 23
Query: 1014 gtaatggagagcagc 1028
|||||||||||||||
Sbjct: 22 gtaatggagagcagc 8
>gb|CF304844.1|CF304844 ABF1--06-B13.g1 ABF3-overexpressing transgenic rice lambda phage cDNA
library (ABF1) Oryza sativa (japonica cultivar-group)
cDNA clone ABF1--06-B13, mRNA sequence
Length = 464
Score = 101 bits (51), Expect = 9e-019
Identities = 114/135 (84%)
Strand = Plus / Minus
Query: 894 gcaaactgccgtgccgcatcgatgcagaagccatagttcgctagtgaaaggtgagccccc 953
||||||||||||| ||| ||||| ||||| |||| || | ||||||||||||||| |||
Sbjct: 142 gcaaactgccgtgacgcttcgatacagaaagcataatttgatagtgaaaggtgagcaccc 83
Query: 954 tctgtcatgatgaacacgatagcctcaaaaccgacttcggaagcatctggatggcgtgct 1013
|| | |||||| ||| |||||||||||| || ||||| |||||||| || || || |||
Sbjct: 82 tcggacatgatatacatgatagcctcaaagcctacttctgaagcatcagggtgtcgagct 23
Query: 1014 gtaatggagagcagc 1028
|||||||||||||||
Sbjct: 22 gtaatggagagcagc 8
Score = 81.8 bits (41), Expect = 9e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 650 tgttaggcatcgctggagagaagccagcgcatggtttcgcacctcctccctctgatccag 709
||||||||||||||| || |||| ||||| || |||| ||||||||| ||||||||||
Sbjct: 383 tgttaggcatcgctgaagcgaagttagcgcgtgatttctcacctcctctctctgatccaa 324
Query: 710 gctcagtttcttcagtgcttgcagcagcctgagccacatctccct 754
|||| || |||||||||||||||| ||||||||||||||||
Sbjct: 323 actcaactttttcagtgcttgcagcaatttgagccacatctccct 279
>gb|C28076.1|C28076 C28076 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C53890_2A, mRNA sequence
Length = 378
Score = 95.6 bits (48), Expect = 6e-017
Identities = 103/120 (85%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 498 ttcatggcgagcacaagtgacccttcc-atgtttctgtagtccttctgggagtggttctg 556
||||||||||||||||| || |||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 292 ttcatggcgagcacaagggatccttcccatgttcctgtagtccttctgcgagtgattctg 233
Query: 557 gctgatctccagcaaatcatcgagcaaggagaatatgacgaggtcaaaggcatgggacca 616
||||||||| || || ||||| |||| | |||||||||||| || || ||||| |||||
Sbjct: 232 gctgatctctagtaagtcatccagcagcgcgaatatgacgagatcgaaagcatgtgacca 173
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0476C12
Length = 157570
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 124274 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 124215
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 124214 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 124155
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 124154 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 124095
Query: 1274 ctgaac 1279
||||||
Sbjct: 124094 ctgaac 124089
>dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0042G06
Length = 123571
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 17727 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 17668
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 17667 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 17608
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 17607 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 17548
Query: 1274 ctgaac 1279
||||||
Sbjct: 17547 ctgaac 17542
>gb|AACV01004078.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004078, whole
genome shotgun sequence
Length = 22546
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 10924 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 10865
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 10864 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 10805
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 10804 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 10745
Query: 1274 ctgaac 1279
||||||
Sbjct: 10744 ctgaac 10739
>ref|XM_465291.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 4275
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 3309 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 3250
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 3249 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 3190
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 3189 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 3130
Query: 1274 ctgaac 1279
||||||
Sbjct: 3129 ctgaac 3124
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 7180649 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 7180590
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 7180589 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 7180530
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 7180529 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 7180470
Query: 1274 ctgaac 1279
||||||
Sbjct: 7180469 ctgaac 7180464
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 13101246 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 13101187
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 13101186 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 13101127
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 13101126 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 13101067
Query: 1274 ctgaac 1279
||||||
Sbjct: 13101066 ctgaac 13101061
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 13101246 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 13101187
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 13101186 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 13101127
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 13101126 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 13101067
Query: 1274 ctgaac 1279
||||||
Sbjct: 13101066 ctgaac 13101061
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 75.8 bits (38), Expect = 5e-011
Identities = 149/186 (80%)
Strand = Plus / Minus
Query: 1094 aacctcctgtgtgatgttctcacaatacgcatctgctacccgtgcgtcgagcttgagaac 1153
||||||||| || |||||||||||||| ||||| || || || || |||||||| | ||
Sbjct: 13147697 aacctcctgggtaatgttctcacaataagcatcagccacacgagcatcgagcttcaaaat 13147638
Query: 1154 taactgcaacgacctcagtaattcatcagcaagattctccttgtatggtagcaacctctg 1213
|||||| | ||||||||||| ||||| ||||||||||||| || || ||||| | |||
Sbjct: 13147637 taactgaagagacctcagtaaatcatccacaagattctccttataaggaagcaagcgctg 13147578
Query: 1214 gcatatcctcaggagtccaaaaatagctttctccacgagagcacacggcataactgtgga 1273
|| || ||| || ||||||| ||| |||||||| ||| ||| ||||| ||||| ||
Sbjct: 13147577 acagatgtgcagcagcccaaaaacagccttctccaccagattacagggcatcactgtaga 13147518
Query: 1274 ctgaac 1279
||||||
Sbjct: 13147517 ctgaac 13147512
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,502,826
Number of Sequences: 438736
Number of extensions: 1502826
Number of successful extensions: 6539
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6403
Number of HSP's gapped (non-prelim): 135
length of query: 1282
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1261
effective length of database: 2,791,206,460
effective search space: 3519711346060
effective search space used: 3519711346060
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)