BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619548.2.1
(691 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF339198.1|CF339198 RCL1--04-B18.g1 Regenerated callus l... 482 e-133
dbj|AK063752.1| Oryza sativa (japonica cultivar-group) cDNA... 482 e-133
dbj|AK099282.1| Oryza sativa (japonica cultivar-group) cDNA... 482 e-133
gb|CF340229.1|CF340229 RCL1--07-F21.g1 Regenerated callus l... 478 e-132
gb|CF329685.1|CF329685 NACL--05-B14.g1 Rice callus plasmid ... 472 e-130
gb|CF332451.1|CF332451 NACL--08-P10.b1 Rice callus plasmid ... 472 e-130
dbj|AK119175.1| Oryza sativa (japonica cultivar-group) cDNA... 472 e-130
ref|XM_483414.1| Oryza sativa (japonica cultivar-group), mRNA 468 e-129
gb|CO435580.1|CO435580 OsMR646 5MT resistant rice mutant cD... 458 e-126
gb|AU065336.1|AU065336 AU065336 Rice cDNA from immature lea... 444 e-122
gb|C24949.1|C24949 C24949 Rice green shoot Oryza sativa (ja... 436 e-120
gb|AU092594.1|AU092594 AU092594 Rice callus Oryza sativa (j... 434 e-119
gb|CF331162.1|CF331162 NACL--07-C19.g1 Rice callus plasmid ... 410 e-112
gb|C25268.1|C25268 C25268 Rice shoot Oryza sativa (japonica... 396 e-108
dbj|AK120524.1| Oryza sativa (japonica cultivar-group) cDNA... 379 e-102
gb|AU164756.1|AU164756 AU164756 Rice cDNA from immature lea... 377 e-102
gb|CB656199.1|CB656199 OSJNEc10E06.r OSJNEc Oryza sativa (j... 371 e-100
gb|D15957.2|D15957 RICC1675A Rice callus Oryza sativa (japo... 363 8e-098
gb|C27659.1|C27659 C27659 Rice callus cDNA Oryza sativa (ja... 357 5e-096
gb|C74957.1|C74957 C74957 Rice cDNA from immature leaf incl... 355 2e-095
gb|C74213.1|C74213 C74213 Rice panicle shorter than 3cm Ory... 347 5e-093
gb|CF332452.1|CF332452 NACL--08-P10.g1 Rice callus plasmid ... 347 5e-093
gb|C27466.1|C27466 C27466 Rice callus cDNA Oryza sativa (ja... 345 2e-092
gb|D23101.1|D23101 RICC2194A Rice callus Oryza sativa (japo... 323 7e-086
gb|CV733382.1|CV733382 FLO--08-E10.g1 Rice flower lambda ph... 321 3e-085
gb|D24666.1|D24666 RICR2341A Rice root Oryza sativa (japoni... 315 2e-083
gb|AU092669.1|AU092669 AU092669 Rice callus Oryza sativa (j... 315 2e-083
gb|CF315366.1|CF315366 HD--04-E05.b1 OsHDAC1-overexpressing... 315 2e-083
gb|CF315473.1|CF315473 HD--04-G14.b1 OsHDAC1-overexpressing... 315 2e-083
gb|CF327396.1|CF327396 NACL--01-N21.b1 Rice callus plasmid ... 315 2e-083
gb|CF331585.1|CF331585 NACL--07-M09.b1 Rice callus plasmid ... 309 1e-081
gb|CF331586.1|CF331586 NACL--07-M09.g1 Rice callus plasmid ... 309 1e-081
gb|D15873.1|D15873 RICC1449A Rice callus Oryza sativa (japo... 307 4e-081
gb|AU031182.1|AU031182 AU031182 Rice cDNA from immature lea... 301 3e-079
gb|CX728710.1|CX728710 OSJNEf11I21.r OSJNEf Oryza sativa (j... 299 1e-078
gb|CB683771.1|CB683771 OSJNEf12J22.f OSJNEf Oryza sativa (j... 293 6e-077
gb|C74132.1|C74132 C74132 Rice panicle shorter than 3cm Ory... 281 2e-073
gb|C98358.1|C98358 C98358 Rice callus Oryza sativa (japonic... 281 2e-073
gb|AU184450.1|AU184450 AU184450 Rice root Oryza sativa (jap... 274 6e-071
gb|AU172775.1|AU172775 AU172775 Rice panicle shorter than 3... 266 1e-068
gb|AU164951.1|AU164951 AU164951 Rice cDNA from immature lea... 260 9e-067
gb|CF315474.1|CF315474 HD--04-G14.g1 OsHDAC1-overexpressing... 244 5e-062
gb|AQ329713.1|AQ329713 nbxb0045J15f CUGI Rice BAC Library O... 240 8e-061
gb|AU062672.2|AU062672 AU062672 Rice callus Oryza sativa (j... 240 8e-061
dbj|AP003888.4| Oryza sativa (japonica cultivar-group) geno... 240 8e-061
gb|AACV01018885.1| Oryza sativa (japonica cultivar-group) c... 240 8e-061
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 240 8e-061
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 240 8e-061
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 240 8e-061
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 240 8e-061
gb|CF315367.1|CF315367 HD--04-E05.g1 OsHDAC1-overexpressing... 230 8e-058
gb|C27421.1|C27421 C27421 Rice callus cDNA Oryza sativa (ja... 226 1e-056
gb|C27768.1|C27768 C27768 Rice callus cDNA Oryza sativa (ja... 226 1e-056
gb|AC108763.2| Oryza sativa (japonica cultivar-group) chrom... 226 1e-056
gb|AACV01020343.1| Oryza sativa (japonica cultivar-group) c... 226 1e-056
gb|AC099404.2| Oryza sativa (japonica cultivar-group) chrom... 226 1e-056
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 226 1e-056
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 226 1e-056
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 226 1e-056
gb|CB000315.1|CB000315 S345U_E09 Rice cold stress germinati... 218 3e-054
gb|AU029460.1|AU029460 AU029460 Rice panicle shorter than 3... 190 7e-046
gb|CF329684.1|CF329684 NACL--05-B14.b1 Rice callus plasmid ... 190 7e-046
gb|AQ329220.1|AQ329220 nbxb0044J07f CUGI Rice BAC Library O... 186 1e-044
gb|AQ363872.2|AQ363872 nbxb0060G23f CUGI Rice BAC Library O... 186 1e-044
gb|AQ256837.1|AQ256837 nbxb0016N20r CUGI Rice BAC Library O... 180 7e-043
gb|AU068617.1|AU068617 AU068617 Rice callus Oryza sativa (j... 168 3e-039
gb|AU071090.1|AU071090 AU071090 Rice cDNA from young root O... 161 6e-037
gb|CF299450.1|CF299450 7LEAF--03-H17.b1 Rice leaf plasmid c... 159 2e-036
gb|AU225544.1|AU225544 AU225544 Oryza sativa Koshihikari pi... 137 9e-030
gb|AQ258131.1|AQ258131 nbxb0019D02f CUGI Rice BAC Library O... 131 5e-028
gb|AU164952.1|AU164952 AU164952 Rice cDNA from immature lea... 129 2e-027
gb|D22873.1|D22873 RICC1675B Rice callus Oryza sativa (japo... 117 8e-024
gb|AU108903.1|AU108903 AU108903 Rice callus Oryza sativa (j... 86 3e-014
gb|AU160845.1|AU160845 AU160845 Rice callus Oryza sativa (j... 78 7e-012
gb|AU096840.1|AU096840 AU096840 Rice green shoot Oryza sati... 52 4e-004
gb|AACV01026337.1| Oryza sativa (japonica cultivar-group) C... 44 0.099
gb|CH401480.1| Oryza sativa (japonica cultivar-group) scaff... 44 0.099
dbj|AP003331.3| Oryza sativa (japonica cultivar-group) geno... 42 0.39
gb|AACV01000976.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 42 0.39
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 42 0.39
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 42 0.39
>gb|CF339198.1|CF339198 RCL1--04-B18.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--04-B18, mRNA sequence
Length = 651
Score = 482 bits (243), Expect = e-133
Identities = 369/411 (89%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 51 gcaaagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 110
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||||| || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 111 aagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 170
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 171 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 230
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 231 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 290
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcc 355
|||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 291 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgct 350
Query: 356 cacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatc 415
|||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 351 cacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatc 410
Query: 416 gtggtcaccaacaagctcgccaggctccgcagccaagaggacgagtgaaat 466
||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 411 gtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtgaaat 461
>dbj|AK063752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A02, full
insert sequence
Length = 750
Score = 482 bits (243), Expect = e-133
Identities = 369/411 (89%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 50 gcaaagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 109
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||||| || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 110 aagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 169
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 170 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 229
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 230 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 289
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcc 355
|||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 290 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgct 349
Query: 356 cacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatc 415
|||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 350 cacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatc 409
Query: 416 gtggtcaccaacaagctcgccaggctccgcagccaagaggacgagtgaaat 466
||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 410 gtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtgaaat 460
>dbj|AK099282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130H04, full
insert sequence
Length = 745
Score = 482 bits (243), Expect = e-133
Identities = 369/411 (89%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 51 gcaaagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 110
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||||| || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 111 aagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 170
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 171 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 230
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 231 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 290
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcc 355
|||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 291 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgct 350
Query: 356 cacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatc 415
|||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 351 cacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatc 410
Query: 416 gtggtcaccaacaagctcgccaggctccgcagccaagaggacgagtgaaat 466
||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 411 gtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtgaaat 461
>gb|CF340229.1|CF340229 RCL1--07-F21.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--07-F21, mRNA sequence
Length = 459
Score = 478 bits (241), Expect = e-132
Identities = 367/409 (89%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 51 gcaaagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 110
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||||| || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 111 aagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 170
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 171 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 230
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 231 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 290
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcc 355
|||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 291 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgct 350
Query: 356 cacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatc 415
|||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||||
Sbjct: 351 cacaacgtctccacccgcaagcgcaaggagatcgtcgagcgcgctgcgcagctggacatc 410
Query: 416 gtggtcaccaacaagctcgccaggctccgcagccaagaggacgagtgaa 464
||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 411 gtggtcaccaacaagcttgccaggctccgcagccaggaggacgagtgaa 459
>gb|CF329685.1|CF329685 NACL--05-B14.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--05-B14, mRNA sequence
Length = 483
Score = 472 bits (238), Expect = e-130
Identities = 361/402 (89%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 120
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 121 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 180
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 181 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 240
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 241 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 300
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 301 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 360
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtgg 419
|||| || || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct: 361 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 420
Query: 420 tcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 421 tcaccaacaagcttgcaaggctccgtagccaggaggacgagt 462
>gb|CF332451.1|CF332451 NACL--08-P10.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-P10, mRNA sequence
Length = 505
Score = 472 bits (238), Expect = e-130
Identities = 361/402 (89%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 62 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 121
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 122 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 181
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 182 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 241
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 242 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 301
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 302 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 361
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtgg 419
|||| || || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct: 362 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 421
Query: 420 tcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 422 tcaccaacaagcttgcaaggctccgtagccaggaggacgagt 463
>dbj|AK119175.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F05, full
insert sequence
Length = 967
Score = 472 bits (238), Expect = e-130
Identities = 361/402 (89%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 405 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 464
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 465 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 524
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 525 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 584
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 585 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 644
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 645 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 704
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtgg 419
|||| || || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct: 705 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 764
Query: 420 tcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 765 tcaccaacaagcttgcaaggctccgtagccaggaggacgagt 806
>ref|XM_483414.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 402
Score = 468 bits (236), Expect = e-129
Identities = 359/400 (89%)
Strand = Plus / Plus
Query: 62 atggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaagagg 121
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaagagg 60
Query: 122 ccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcgac 181
|||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 61 ccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattgac 120
Query: 182 tcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggctcc 241
||||| |||||| | |||||||||||||||||||||||||||||||| || || |||||
Sbjct: 121 tcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggctca 180
Query: 242 gacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatgtc 301
||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||||
Sbjct: 181 gacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatgtc 240
Query: 302 tccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccacaac 361
|| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 241 tctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccacaac 300
Query: 362 gtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtggtc 421
|| || || |||||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 301 gtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtggtc 360
Query: 422 accaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 361 accaacaagcttgcaaggctccgtagccaggaggacgagt 400
>gb|CO435580.1|CO435580 OsMR646 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 919
Score = 458 bits (231), Expect = e-126
Identities = 359/402 (89%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
|||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 108 agatggcgntgcccctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 167
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 168 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 227
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 228 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 287
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 288 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 347
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 348 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 407
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtgg 419
|||| || || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct: 408 acgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtgg 467
Query: 420 tcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 468 tcaccaacaagcttgcaaggctccgtagccaggaggacgagt 509
>gb|AU065336.1|AU065336 AU065336 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61860_1A, mRNA sequence
Length = 485
Score = 444 bits (224), Expect = e-122
Identities = 361/404 (89%), Gaps = 2/404 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 38 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 97
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 98 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 157
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 158 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 217
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 218 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 277
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 278 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 337
Query: 360 acgtgtc-cacccgcaagcgcaaggagattgtggagcgtgctgcgcaact-ggacatcgt 417
|||| || || |||||||||||||| || |||||||||||||| | |||||||||
Sbjct: 338 acgtctcttacgaagaagcgcaaggagatcgttgagcgtgctgcgcagttcggacatcgt 397
Query: 418 ggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 398 ggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 441
>gb|C24949.1|C24949 C24949 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S16261_2A, mRNA sequence
Length = 458
Score = 436 bits (220), Expect = e-120
Identities = 360/404 (89%), Gaps = 2/404 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 31 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 90
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 91 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 150
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 151 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 210
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 211 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 270
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 271 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 330
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgc-tgcgca-actggacatcgt 417
|||| || || |||||||||||||| || |||| ||| |||||| | |||||||||
Sbjct: 331 acgtctctacgaagaagcgcaaggagatcgttgagcctgcttgcgcagtccggacatcgt 390
Query: 418 ggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 391 ggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 434
>gb|AU092594.1|AU092594 AU092594 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52521, mRNA sequence
Length = 630
Score = 434 bits (219), Expect = e-119
Identities = 358/402 (89%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 29 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 88
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct: 89 ggccccatagtgaccgctacctatgcctcaagccaag-tggcgcaggcccaagggtattg 147
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 148 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 207
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 208 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 267
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 268 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 327
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtgg 419
|||| || || |||||||||||||| || |||||| |||||| || ||||||||||
Sbjct: 328 acgtctctacgaagaagcgcaaggagatcgttgagcgt-ntgcgcagctcgacatcgtgg 386
Query: 420 tcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 387 tcaccaacaagcttgcaaggctccgtagccaggaggacgagt 428
>gb|CF331162.1|CF331162 NACL--07-C19.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-C19, mRNA sequence
Length = 523
Score = 410 bits (207), Expect = e-112
Identities = 294/323 (91%)
Strand = Plus / Plus
Query: 144 gccttaagccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttca 203
|||| ||| |||||||||||||||| |||||||| ||||| || |||||| | |||||||
Sbjct: 27 gcctcaagacaagctggcgcaggccaaagggtattgactctcgtgtcaggagaaagttca 86
Query: 204 agggatgcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactacc 263
| ||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||
Sbjct: 87 aaggatgcaccttgatgcccaacattggatatggttctgacaagaagacaaggcactacc 146
Query: 264 ttcccaacaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctga 323
|||||||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 147 ttcccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagctgcttatga 206
Query: 324 tgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaagg 383
||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 207 tgcacaacaggacatactgcgctgagattgctcacaacgtctccacccgcaagcgcaagg 266
Query: 384 agattgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctcc 443
|||| || ||||| |||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 267 agatcgtcgagcgcgctgcgcagctggacatcgtggtcaccaacaagcttgccaggctcc 326
Query: 444 gcagccaagaggacgagtgaaat 466
||||||| |||||||||||||||
Sbjct: 327 gcagccaggaggacgagtgaaat 349
>gb|C25268.1|C25268 C25268 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5743_1A, mRNA sequence
Length = 405
Score = 396 bits (200), Expect = e-108
Identities = 296/328 (90%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 51 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 110
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 111 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 170
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 171 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 230
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 231 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 290
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 291 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccaca 350
Query: 360 acgtgtccacccgcaagcgcaaggagat 387
|||| || || | ||||||||||||||
Sbjct: 351 acgtctctacgaggaagcgcaaggagat 378
>dbj|AK120524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M04, full
insert sequence
Length = 657
Score = 379 bits (191), Expect = e-102
Identities = 356/411 (86%)
Strand = Plus / Plus
Query: 51 ggttcgcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagc 110
||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||| ||||
Sbjct: 14 ggttcgcgaagatggcggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagc 73
Query: 111 agttcaagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggccca 170
||||||||||||| || |||||||||| |||| ||| |||||||||||||||| |
Sbjct: 74 agttcaagaggccgcacagcgaccgctacatcggcctcaagacaagctggcgcaggccaa 133
Query: 171 agggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcg 230
|||||||||||||||| |||||| | ||||||||||||||||| |||||||| || || |
Sbjct: 134 agggtatcgactcccgtgtcaggagaaagttcaagggatgcactttgatgcctaatattg 193
Query: 231 gatatggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttg 290
| ||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| |
Sbjct: 194 gctatggttctgacaagaagacgaggcattaccttcccaacaaattcaagaagtttgtcg 253
Query: 291 ttcacaatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgaga 350
| ||||||||||| ||||||||| | || |||||||||||||||| ||||| |||||||
Sbjct: 254 tccacaatgtctctgagctggagttacttatgatgcacaacaggacatactgtgctgaga 313
Query: 351 tcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactgg 410
|||| ||||| || || || |||||||||||||| |||||||||||||| || || |
Sbjct: 314 tcgctcacaatgtctcaacgaagaagcgcaaggagatcgtggagcgtgctgcacagcttg 373
Query: 411 acatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
| |||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 374 atatcgtggtcaccaacaagcttgccaggcttcgcagccaggaggacgagt 424
>gb|AU164756.1|AU164756 AU164756 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61114, mRNA sequence
Length = 405
Score = 377 bits (190), Expect = e-102
Identities = 271/298 (90%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 48 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 107
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 108 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 167
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 168 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 227
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 228 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 287
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgccca 357
|||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |||||
Sbjct: 288 tctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgccca 345
>gb|CB656199.1|CB656199 OSJNEc10E06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10E06 3', mRNA sequence
Length = 770
Score = 371 bits (187), Expect = e-100
Identities = 355/411 (86%)
Strand = Plus / Minus
Query: 51 ggttcgcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagc 110
||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||| ||||
Sbjct: 634 ggttcgcgaagatggcggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagc 575
Query: 111 agttcaagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggccca 170
||||||||||||| | |||||||||| |||| ||| |||||||||||||||| |
Sbjct: 574 agttcaagaggccgtacagcgaccgctacatcggcctcaagacaagctggcgcaggccaa 515
Query: 171 agggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcg 230
|||||||||||||||| |||||| | ||||||||||||||||| |||||||| || || |
Sbjct: 514 agggtatcgactcccgtgtcaggagaaagttcaagggatgcactttgatgcctaatattg 455
Query: 231 gatatggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttg 290
| ||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| |
Sbjct: 454 gctatggttctgacaagaagacgaggcattaccttcccaacaaattcaagaagtttgtcg 395
Query: 291 ttcacaatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgaga 350
| ||||||||||| ||||||||| | || |||||||||||||||| ||||| |||||||
Sbjct: 394 tccacaatgtctctgagctggagttacttatgatgcacaacaggacatactgtgctgaga 335
Query: 351 tcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactgg 410
|||| ||||| || || || |||||||||||||| |||||||||||||| || || |
Sbjct: 334 tcgctcacaatgtctcaacgaagaagcgcaaggagatcgtggagcgtgctgcacagcttg 275
Query: 411 acatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
| |||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 274 atatcgtggtcaccaacaagcttgccaggcttcgcagccaggaggacgagt 224
>gb|D15957.2|D15957 RICC1675A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1675A, mRNA sequence
Length = 359
Score = 363 bits (183), Expect = 8e-098
Identities = 257/282 (91%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 44 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 103
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 104 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 163
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 164 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 223
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| ||||||| || |||||||
Sbjct: 224 cagacaagaagaccaggcactacctccccaacaagttcaagnagtttgtggtgcacaatg 283
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttact 341
|||| ||||||||| |||| |||||||||||||||| ||||
Sbjct: 284 tctctgagctggagttgctcatgatgcacaacaggacctact 325
>gb|C27659.1|C27659 C27659 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52521_2A, mRNA sequence
Length = 395
Score = 357 bits (180), Expect = 5e-096
Identities = 303/344 (88%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30 agatggcggtgc-gctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 88
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| |||||||||||||||| | |||||||||| |
Sbjct: 89 ggccccatagtgaccgctacctatgcctnaagccaagctggcgcaaggccaagggtattg 148
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 149 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 208
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| | |||||| || |||||||
Sbjct: 209 cagacaagaagaccaggcactacctccccaacaagttcaagangtttgtngtgcacaatg 268
Query: 300 tctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccaca 359
|||| ||||||||| |||| |||||||||||||||| ||||| | ||||| |||||||
Sbjct: 269 tctctgagctggagttgctcatgatgcacaacaggacctactgtnccgagattgcccaca 328
Query: 360 acgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcg 403
|||| || || |||||||||||||| || |||||| |||||
Sbjct: 329 acgtctctacgaagaagcgcaaggagatcgttgagcgttctgcg 372
>gb|C74957.1|C74957 C74957 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E61191_1A,
mRNA sequence
Length = 330
Score = 355 bits (179), Expect = 2e-095
Identities = 252/275 (91%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 56 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 115
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 116 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 175
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 176 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 235
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 236 cagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaatg 295
Query: 300 tctccgagctggagctgctgc-tgatgcacaacag 333
|||| ||||||||| |||| | |||||||||||||
Sbjct: 296 tctctgagctggagttgctccatgatgcacaacag 330
>gb|C74213.1|C74213 C74213 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30658_1A, mRNA sequence
Length = 403
Score = 347 bits (175), Expect = 5e-093
Identities = 314/359 (87%), Gaps = 4/359 (1%)
Strand = Plus / Plus
Query: 62 atggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaagagg 121
|||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||
Sbjct: 49 atggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaagagg 108
Query: 122 ccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcgac 181
|| || |||||||||| |||| ||| |||||||||||||||| |||||||| |||
Sbjct: 109 ccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggtattgac 168
Query: 182 tcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggctcc 241
|| || |||||| | |||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 169 tctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatatggttct 228
Query: 242 gacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatgtc 301
||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 229 gacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcacaatgtc 288
Query: 302 tccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccacaac 361
|| |||||||||||||| |||||||||||||||| |||||||||||||| || || ||
Sbjct: 289 tctgagctggagctgcttatgatgcacaacaggacatactgcgctgagattgctca-nac 347
Query: 362 gtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtggt 420
|| ||||||||||||||||||||||| || ||||| ||||| | |||||||||||||
Sbjct: 348 gtctccacccgcaagcgcaaggagatcgtcgagcgcgctgc---antggacatcgtggt 403
>gb|CF332452.1|CF332452 NACL--08-P10.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-P10, mRNA sequence
Length = 553
Score = 347 bits (175), Expect = 5e-093
Identities = 283/319 (88%)
Strand = Plus / Minus
Query: 143 tgccttaagccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttc 202
||||| ||||||||||||||||||||||||||||| |||||||| |||||| | ||||||
Sbjct: 553 tgcctcaagccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttc 494
Query: 203 aagggatgcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactac 262
|||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||
Sbjct: 493 aagggatgcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactac 434
Query: 263 cttcccaacaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctg 322
|| |||||||||||||| |||||||| || ||||||||||| ||||||||| |||| ||
Sbjct: 433 ctccccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatg 374
Query: 323 atgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaag 382
|||||||||||||| ||||| || ||||| ||||||||||| | || |||||||||
Sbjct: 373 atgcacaacaggacctactgtgccgagattgcccacaacgtctttacgaagaagcgcaag 314
Query: 383 gagattgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctc 442
||||| || |||||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 313 gagatcgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctc 254
Query: 443 cgcagccaagaggacgagt 461
|| ||||| ||||||||||
Sbjct: 253 cgtagccaggaggacgagt 235
>gb|C27466.1|C27466 C27466 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51946_1A, mRNA sequence
Length = 318
Score = 345 bits (174), Expect = 2e-092
Identities = 249/275 (90%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 39 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 98
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |
Sbjct: 99 ggccccatagtgaccgctacctatgcctcaagccaagctggcgcaggcccaagggtattg 158
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 159 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 218
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||| ||||||||||||| |||||||||||||| |||||||| || |||| ||
Sbjct: 219 cagacaagaagnccaggcactacctccccaacaagttcaagaagtttgtggtgcacantg 278
Query: 300 tctccgagctggagctgctgctgatgcacaacagg 334
|||| |||||| || |||| ||||||||||||||
Sbjct: 279 tctctgagctgnagttgctcatgatgcacaacagg 313
>gb|D23101.1|D23101 RICC2194A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2194_1A, mRNA sequence
Length = 328
Score = 323 bits (163), Expect = 7e-086
Identities = 262/295 (88%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| ||||||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 34 gcaaagatggtggtgccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 93
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||||| || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 94 aagaggccgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 153
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 154 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 213
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 214 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 273
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgaga 350
|||||||| |||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 274 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgctgaga 328
>gb|CV733382.1|CV733382 FLO--08-E10.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-E10,
mRNA sequence
Length = 491
Score = 321 bits (162), Expect = 3e-085
Identities = 267/302 (88%)
Strand = Plus / Minus
Query: 160 gcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgat 219
|||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||
Sbjct: 491 gcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgat 432
Query: 220 gcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaacaagttcaa 279
||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 431 gcccaacattggttacggctcagacaagaagaccaggcactacctccccaacaagttcaa 372
Query: 280 aaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacaggactta 339
|||||||| || |||||||||| ||||||||| |||| |||||||||||||||| ||
Sbjct: 371 gaagtttgtggtgcacaatgtctttgagctggagttgctcatgatgcacaacaggaccta 312
Query: 340 ctgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgc 399
||| || ||||| ||||||||||| || || |||||||||||||| || ||||||||
Sbjct: 311 ctgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgc 252
Query: 400 tgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacga 459
|||||| || ||||||||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct: 251 tgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacga 192
Query: 460 gt 461
||
Sbjct: 191 gt 190
>gb|D24666.1|D24666 RICR2341A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2341_1A, mRNA sequence
Length = 332
Score = 315 bits (159), Expect = 2e-083
Identities = 243/273 (89%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 50 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 109
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||||| ||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 110 ggccccatagtgaccgntacctatgcctcaagccaagctggcgnaggcccaagggtattn 169
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | ||||||||||| |||||||||||||||||||| | || ||||
Sbjct: 170 actcccgtgtcaggagaaagttcaagggntgcaccttgatgcccaacattngttacggct 229
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||| ||||||| |||||||||||||| |||||||| || |||||||
Sbjct: 230 cagacaagaagaccaggnactacctccccaacaagttcaagaagtttgtggtgcacaatg 289
Query: 300 tctccgagctggagctgctgctgatgcacaaca 332
|||| |||||||| |||| ||||||||||||
Sbjct: 290 tctcttagctggagttgctcatgatgcacaaca 322
>gb|AU092669.1|AU092669 AU092669 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52822, mRNA sequence
Length = 647
Score = 315 bits (159), Expect = 2e-083
Identities = 342/403 (84%)
Strand = Plus / Plus
Query: 59 aagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaag 118
||||||||||| || |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 47 aagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 106
Query: 119 aggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatc 178
||||| || |||||||||| |||| ||| ||||||||||||| || ||||||||
Sbjct: 107 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtatt 166
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
||||| || |||||| | ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 167 gactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatggt 226
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 227 tcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaac 286
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| |||||||||||||| ||||||||||||||| ||||| ||||| || || ||
Sbjct: 287 gtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcat 346
Query: 359 aacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtg 418
|| |||||||| || ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct: 347 aatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgtc 406
Query: 419 gtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
|||||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 407 gtcaccaacaagcttgccaggctacgcagccaggaggatgagt 449
>gb|CF315366.1|CF315366 HD--04-E05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-E05, mRNA sequence
Length = 635
Score = 315 bits (159), Expect = 2e-083
Identities = 342/403 (84%)
Strand = Plus / Plus
Query: 59 aagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaag 118
||||||||||| || |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 51 aagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 110
Query: 119 aggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatc 178
||||| || |||||||||| |||| ||| ||||||||||||| || ||||||||
Sbjct: 111 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtatt 170
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
||||| || |||||| | ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 171 gactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatggt 230
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 231 tcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaac 290
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| |||||||||||||| ||||||||||||||| ||||| ||||| || || ||
Sbjct: 291 gtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcat 350
Query: 359 aacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtg 418
|| |||||||| || ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct: 351 aatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgtc 410
Query: 419 gtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
|||||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 411 gtcaccaacaagcttgccaggctacgcagccaggaggatgagt 453
>gb|CF315473.1|CF315473 HD--04-G14.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-G14, mRNA sequence
Length = 578
Score = 315 bits (159), Expect = 2e-083
Identities = 342/403 (84%)
Strand = Plus / Plus
Query: 59 aagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaag 118
||||||||||| || |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 48 aagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 107
Query: 119 aggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatc 178
||||| || |||||||||| |||| ||| ||||||||||||| || ||||||||
Sbjct: 108 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtatt 167
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
||||| || |||||| | ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 168 gactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatggt 227
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 228 tcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaac 287
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| |||||||||||||| ||||||||||||||| ||||| ||||| || || ||
Sbjct: 288 gtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcat 347
Query: 359 aacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtg 418
|| |||||||| || ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct: 348 aatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgtc 407
Query: 419 gtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
|||||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 408 gtcaccaacaagcttgccaggctacgcagccaggaggatgagt 450
>gb|CF327396.1|CF327396 NACL--01-N21.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--01-N21, mRNA sequence
Length = 633
Score = 315 bits (159), Expect = 2e-083
Identities = 342/403 (84%)
Strand = Plus / Plus
Query: 59 aagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaag 118
||||||||||| || |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 47 aagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 106
Query: 119 aggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatc 178
||||| || |||||||||| |||| ||| ||||||||||||| || ||||||||
Sbjct: 107 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtatt 166
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
||||| || |||||| | ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 167 gactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatggt 226
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 227 tcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaac 286
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| |||||||||||||| ||||||||||||||| ||||| ||||| || || ||
Sbjct: 287 gtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcat 346
Query: 359 aacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtg 418
|| |||||||| || ||||||||||| |||||||| ||||| || || ||||| ||
Sbjct: 347 aatgtgtccacgaagaaacgcaaggagatagtggagcgcgctgctcagcttgacattgtc 406
Query: 419 gtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
|||||||||||||| |||||||| |||||||| ||||| ||||
Sbjct: 407 gtcaccaacaagcttgccaggctacgcagccaggaggatgagt 449
>gb|CF331585.1|CF331585 NACL--07-M09.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-M09, mRNA sequence
Length = 480
Score = 309 bits (156), Expect = 1e-081
Identities = 258/292 (88%)
Strand = Plus / Plus
Query: 170 aagggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatc 229
|||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1 aagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacatt 60
Query: 230 ggatatggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgtt 289
|| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 61 ggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtg 120
Query: 290 gttcacaatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgag 349
|| ||||||||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 121 gtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgag 180
Query: 350 atcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactg 409
|| ||||||||||| || || |||||||||||||| || |||||||||||||| ||
Sbjct: 181 attgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctc 240
Query: 410 gacatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 241 gacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 292
>gb|CF331586.1|CF331586 NACL--07-M09.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-M09, mRNA sequence
Length = 480
Score = 309 bits (156), Expect = 1e-081
Identities = 258/292 (88%)
Strand = Plus / Minus
Query: 170 aagggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatc 229
|||||||| |||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 480 aagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacatt 421
Query: 230 ggatatggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgtt 289
|| || ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 420 ggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtg 361
Query: 290 gttcacaatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgag 349
|| ||||||||||| ||||||||| |||| |||||||||||||||| ||||| || |||
Sbjct: 360 gtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgag 301
Query: 350 atcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactg 409
|| ||||||||||| || || |||||||||||||| || |||||||||||||| ||
Sbjct: 300 attgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctc 241
Query: 410 gacatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 240 gacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 189
>gb|D15873.1|D15873 RICC1449A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1449A, mRNA sequence
Length = 354
Score = 307 bits (155), Expect = 4e-081
Identities = 271/309 (87%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 56 gcaaagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttc 115
|||||||||| || |||| |||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 37 gcaaagatggtggngccgttgctgacgaagaagatcgtgaagaagcgggtgaagcagttc 96
Query: 116 aagaggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggt 175
|||||| | || |||||||||| |||| ||| |||||||||||||||| ||||||
Sbjct: 97 aagaggncgcacagcgaccgctacattggcctcaagacaagctggcgcaggccaaagggt 156
Query: 176 atcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatat 235
|| ||||| || |||||| | |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 157 attgactctcgtgtcaggagaaagttcaaaggatgcaccttgatgcccaacattggatat 216
Query: 236 ggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcac 295
|| || ||||||||||| |||||||||||||||||||||||||| |||||||| || |||
Sbjct: 217 ggttctgacaagaagacaaggcactaccttcccaacaagttcaagaagtttgtggtgcac 276
Query: 296 aatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgc-tgagatcgc 354
|||||||| |||||||||||||| |||||||||||||||| |||||||| |||||| ||
Sbjct: 277 aatgtctctgagctggagctgcttatgatgcacaacaggacatactgcgcttgagattgc 336
Query: 355 ccacaacgt 363
||||||||
Sbjct: 337 tcacaacgt 345
>gb|AU031182.1|AU031182 AU031182 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61114_2Z, mRNA sequence
Length = 474
Score = 301 bits (152), Expect = 3e-079
Identities = 263/299 (87%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 163 caggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcc 222
||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||
Sbjct: 1 caggcccaagggtattgactcccgtgtcaggagaaagttcaagggatgcaccttgatgcc 60
Query: 223 caacatcggatatggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaa 282
|||||| || || ||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 61 caacattggttacggctcagacaagaagaccaggcactacctccccaacaagttcaagaa 120
Query: 283 gtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaacaggacttactg 342
|||||| || ||||||||||| ||||||||| |||| |||||||||||||||| |||||
Sbjct: 121 gtttgtggtgcacaatgtctctgagctggagttgctcatgatgcacaacaggacctactg 180
Query: 343 cgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgc 402
|| ||||| ||||||||||| || || |||||||||||||| || |||||| |||
Sbjct: 181 tgccgagattgcccacaacgtctctacgaagaagcgcaaggagatcgttgagcgt-ntgc 239
Query: 403 gcaactggacatcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||| || ||||||||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 240 gcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 298
>gb|CX728710.1|CX728710 OSJNEf11I21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11I21 3', mRNA sequence
Length = 469
Score = 299 bits (151), Expect = 1e-078
Identities = 250/283 (88%)
Strand = Plus / Minus
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
|||||||| |||||| | |||||||||||||||||||||||||||||||| || || |||
Sbjct: 465 gactcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggc 406
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 405 tcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgcacaat 346
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| ||||||||| |||| |||||||||||||||| ||||| || ||||| ||||||
Sbjct: 345 gtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattgcccac 286
Query: 359 aacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtg 418
||||| || || |||||||||||||| || |||||||||||||| || |||||||||
Sbjct: 285 aacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgacatcgtg 226
Query: 419 gtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
|||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 225 gtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 183
>gb|CB683771.1|CB683771 OSJNEf12J22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf12J22 5', mRNA sequence
Length = 452
Score = 293 bits (148), Expect = 6e-077
Identities = 253/288 (87%)
Strand = Plus / Plus
Query: 174 gtatcgactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggat 233
|||| |||||||||| ||| | |||||||||||||||||||||||||||||||| || |
Sbjct: 1 gtattgactcccgcgctaggagaaagttcaagggatgcaccttgatgcccaacattggtt 60
Query: 234 atggctccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttc 293
| ||||| ||||||||||||||||||||||| |||||||||||||| |||||||| || |
Sbjct: 61 acggctcagacaagaagaccaggcactacctccccaacaagttcaagaagtttgtggtgc 120
Query: 294 acaatgtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcg 353
|||||||||| ||||||||| |||| |||||||||||||||| ||||| || ||||| |
Sbjct: 121 acaatgtctctgagctggagttgctcatgatgcacaacaggacctactgtgccgagattg 180
Query: 354 cccacaacgtgtccacccgcaagcgcaaggagattgtggagcgtgctgcgcaactggaca 413
|||||||||| || || |||||||||||||| || |||||||||||||| || ||||
Sbjct: 181 cccacaacgtctctacgaagaagcgcaaggagatcgttgagcgtgctgcgcagctcgaca 240
Query: 414 tcgtggtcaccaacaagctcgccaggctccgcagccaagaggacgagt 461
||||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 241 tcgtggtcaccaacaagcttgcaaggctccgtagccaggaggacgagt 288
>gb|C74132.1|C74132 C74132 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30472_1A, mRNA sequence
Length = 309
Score = 281 bits (142), Expect = 2e-073
Identities = 225/254 (88%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct: 41 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaancagttcaana 100
Query: 120 ggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatcg 179
|||||||| |||| | || ||||| ||||||||||||||||||||||||||||| |
Sbjct: 101 ggccccatantgacngnnacctatgcctcaagccaagctggcgcaggcccaagggtattg 160
Query: 180 actcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggct 239
||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||
Sbjct: 161 actcccgtgtcaggagaaagttcaagggatgcaccttgatgcccaacattggttacggct 220
Query: 240 ccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaatg 299
| ||||||||||||||||||||| | ||||| |||||||| ||||||| || | | ||||
Sbjct: 221 cagacaagaagaccaggcactacntccccaanaagttcaagaagtttg-tggtgaaaatg 279
Query: 300 tctccgagctggag 313
|||| |||||||||
Sbjct: 280 tctctgagctggag 293
>gb|C98358.1|C98358 C98358 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2194_6Z, mRNA sequence
Length = 628
Score = 281 bits (142), Expect = 2e-073
Identities = 245/273 (89%), Gaps = 5/273 (1%)
Strand = Plus / Plus
Query: 197 aagttcaagggatgcaccttgatgcccaacatcgg-atatggctccgacaagaagaccag 255
|||||||| |||||||||||||| |||||||| || |||||| || ||||||||||| ||
Sbjct: 111 aagttcaaaggatgcaccttgatccccaacattgggatatggttctgacaagaagacaag 170
Query: 256 gcactacc-ttcccaacaagttcaaaaagtttgttgttcacaatgtctccgagctggagc 314
|||||||| |||||||||||||||| |||||||| || ||||||||||| ||||||||||
Sbjct: 171 gcactacccttcccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagc 230
Query: 315 tg-ctgctgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacccgc 373
|| || |||||||||||||||| |||||||||||||| || |||||||| |||||||||
Sbjct: 231 tggcttatgatgcacaacaggacatactgcgctgagattgctcacaacgtctccacccgc 290
Query: 374 aagcgcaaggagattgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctc 433
|||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 291 aagcgcaaggagatcgtcgagcg-cntgcgcagctggacatcgtggtcaccaacaagctt 349
Query: 434 gccaggctccgcagccaagaggacgagtgaaat 466
|||||| |||||||||| |||||||||||||||
Sbjct: 350 gccagg-tccgcagccaggaggacgagtgaaat 381
>gb|AU184450.1|AU184450 AU184450 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2341, mRNA sequence
Length = 449
Score = 274 bits (138), Expect = 6e-071
Identities = 230/261 (88%)
Strand = Plus / Plus
Query: 201 tcaagggatgcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcact 260
||||||||||| |||||||||||||||| || || ||||| |||||||||||||||||||
Sbjct: 1 tcaagggatgcnccttgatgcccaacattggttacggctcagacaagaagaccaggcact 60
Query: 261 accttcccaacaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgc 320
|||| |||||||||||||| |||||||| || ||||||||||| ||||||||| ||||
Sbjct: 61 acctccccaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctca 120
Query: 321 tgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgca 380
|||||||||||||||| ||||| || ||||| ||||||||||| || || |||||||
Sbjct: 121 tgatgcacaacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgca 180
Query: 381 aggagattgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggc 440
||||||| || |||||||||||||| || ||||||||||||||||||||||| || ||||
Sbjct: 181 aggagatcgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggc 240
Query: 441 tccgcagccaagaggacgagt 461
|||| ||||| ||||||||||
Sbjct: 241 tccgtagccaggaggacgagt 261
>gb|AU172775.1|AU172775 AU172775 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30472, mRNA sequence
Length = 442
Score = 266 bits (134), Expect = 1e-068
Identities = 224/254 (88%)
Strand = Plus / Plus
Query: 208 atgcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcc 267
||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||
Sbjct: 1 atgcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctccc 60
Query: 268 caacaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgca 327
|||||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||
Sbjct: 61 caacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgca 120
Query: 328 caacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagat 387
||||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 121 caacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagat 180
Query: 388 tgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcag 447
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| ||
Sbjct: 181 cgttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtag 240
Query: 448 ccaagaggacgagt 461
||| ||||||||||
Sbjct: 241 ccaggaggacgagt 254
>gb|AU164951.1|AU164951 AU164951 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61866, mRNA sequence
Length = 455
Score = 260 bits (131), Expect = 9e-067
Identities = 266/311 (85%)
Strand = Plus / Plus
Query: 59 aagatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaag 118
||||||||||| || |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 76 aagatggcggttccattgctgacgaagaagatcgtgaagaagcgggtgaagcagttcaag 135
Query: 119 aggccccatcttgaccgctacaagtgccttaagccaagctggcgcaggcccaagggtatc 178
||||| || |||||||||| |||| ||| ||||||||||||| || ||||||||
Sbjct: 136 aggccgcacagcgaccgctacattggcctcaagacaagctggcgcagaccaaagggtatt 195
Query: 179 gactcccgcgtcaggcgtaagttcaagggatgcaccttgatgcccaacatcggatatggc 238
||||| || |||||| | ||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 196 gactcacgtgtcaggaggaagttcaagggatgcacattgatgcccaatattggatatggt 255
Query: 239 tccgacaagaagaccaggcactaccttcccaacaagttcaaaaagtttgttgttcacaat 298
|| ||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 256 tcggacaagaagaccaggcattacctgcccaacaagttcaagaagtttgtggtgcacaac 315
Query: 299 gtctccgagctggagctgctgctgatgcacaacaggacttactgcgctgagatcgcccac 358
||||| |||||||||||||| ||||||||||||||| ||||| ||||| || || ||
Sbjct: 316 gtctcagagctggagctgcttatgatgcacaacaggatgtactgtgctgaaattgctcat 375
Query: 359 aacgtgtccac 369
|| ||||||||
Sbjct: 376 aatgtgtccac 386
>gb|CF315474.1|CF315474 HD--04-G14.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-G14, mRNA sequence
Length = 513
Score = 244 bits (123), Expect = 5e-062
Identities = 264/310 (85%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 153 caagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggatgca 212
||||||||||||| || |||||||| ||||| || |||||| | ||||||||||||||||
Sbjct: 507 caagctggcgcagaccaaagggtattgactcacgtgtcaggaggaagttcaagggatgca 448
Query: 213 ccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttcccaaca 272
| ||||||||||| || |||||||| || ||||||||||||||||| ||||| |||||||
Sbjct: 447 cattgatgcccaatattggatatggttcggacaagaagaccaggcattacctgcccaaca 388
Query: 273 agttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcacaaca 332
||||||| |||||||| || ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 387 agttcaagaagtttgtggtgcacaacgtctcagagctggagctgcttatgatgcacaaca 328
Query: 333 ggact-tactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagattgtg 391
|| | ||||| ||||| || || || || |||||||| || ||||||||||| |||
Sbjct: 327 ggnatgtactgtgctgaaattgctcataatgtgtccacgaagaaacgcaaggagatagtg 268
Query: 392 gagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagccaa 451
||||| ||||| || || ||||| || |||||||||||||| |||||||| ||||||||
Sbjct: 267 gagcgcgctgctcagcttgacattgtcgtcaccaacaagcttgccaggctacgcagccag 208
Query: 452 gaggacgagt 461
||||| ||||
Sbjct: 207 gaggatgagt 198
>gb|AQ329713.1|AQ329713 nbxb0045J15f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0045J15f, DNA sequence
Length = 624
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Minus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 399 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 340
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 339 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 280
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 279 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 220
Query: 330 acagg 334
|||||
Sbjct: 219 acagg 215
Score = 75.8 bits (38), Expect = 3e-011
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 98 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 39
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaa 426
| |||||||||||||| || |||||||||||||||||
Sbjct: 38 gatgagcgtgctgcgcagctcgacatcgtggtcaccaa 1
>gb|AU062672.2|AU062672 AU062672 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30102, mRNA sequence
Length = 387
Score = 240 bits (121), Expect = 8e-061
Identities = 229/265 (86%), Gaps = 1/265 (0%)
Strand = Plus / Plus
Query: 197 aagttcaagggatgcaccttgatgcccaacatcggatatggctccgacaagaagaccagg 256
|||||||||||||||||| ||||||||||||| || || ||||| |||||||||||||||
Sbjct: 4 aagttcaagggatgcaccntgatgcccaacattggttacggctcagacaagaagaccagg 63
Query: 257 cactaccttcccaacaagttcaaaaagtttgttgttcacaatgtctccgagctggagctg 316
|||||||| |||||||||||| |||||||| || ||||||||||| ||||||||| ||
Sbjct: 64 cactacctntncaacaagttcaagaagtttgtggtgcacaatgtctctgagctggagttg 123
Query: 317 ctgctgatgcacaacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaag 376
|| |||||||||||||||| ||||| || ||||| ||||||||||| || || |||
Sbjct: 124 ctcatgatgcacaacaggacctactgtgccgagattgcccacaacgtctctacgaagaag 183
Query: 377 cgcaaggagattgtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgcc 436
||||||||||| || |||||||||||| | ||||||||||||||||||||||| ||
Sbjct: 184 cgcaaggagatcgttgagcgtgctgcg-antccgacatcgtggtcaccaacaagcttgca 242
Query: 437 aggctccgcagccaagaggacgagt 461
|||||||| ||||| ||||||||||
Sbjct: 243 aggctccgtagccaggaggacgagt 267
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1191_A10
Length = 140643
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Plus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 28940 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 28999
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 29000 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 29059
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 29060 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 29119
Query: 330 acagg 334
|||||
Sbjct: 29120 acagg 29124
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 27785 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 27844
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 27845 ggccccatagtgaccgctac 27864
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 29241 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 29300
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 29301 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 29360
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 29361 caggaggacgagt 29373
>gb|AACV01018885.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018885, whole
genome shotgun sequence
Length = 93413
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Minus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 89415 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 89356
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 89355 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 89296
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 89295 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 89236
Query: 330 acagg 334
|||||
Sbjct: 89235 acagg 89231
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 90570 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 90511
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 90510 ggccccatagtgaccgctac 90491
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Minus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 89114 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 89055
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 89054 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 88995
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 88994 caggaggacgagt 88982
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Plus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 25846922 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 25846981
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 25846982 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 25847041
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 25847042 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 25847101
Query: 330 acagg 334
|||||
Sbjct: 25847102 acagg 25847106
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25845767 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 25845826
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 25845827 ggccccatagtgaccgctac 25845846
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 25847223 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 25847282
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 25847283 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 25847342
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 25847343 caggaggacgagt 25847355
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Plus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 17307766 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 17307825
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 17307826 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 17307885
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 17307886 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 17307945
Query: 330 acagg 334
|||||
Sbjct: 17307946 acagg 17307950
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 17306611 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 17306670
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 17306671 ggccccatagtgaccgctac 17306690
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 17308067 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 17308126
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 17308127 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 17308186
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 17308187 caggaggacgagt 17308199
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Plus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 24909772 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 24909831
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 24909832 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 24909891
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 24909892 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 24909951
Query: 330 acagg 334
|||||
Sbjct: 24909952 acagg 24909956
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 24908617 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 24908676
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 24908677 ggccccatagtgaccgctac 24908696
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 24910073 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 24910132
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 24910133 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 24910192
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 24910193 caggaggacgagt 24910205
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 240 bits (121), Expect = 8e-061
Identities = 169/185 (91%)
Strand = Plus / Plus
Query: 150 agccaagctggcgcaggcccaagggtatcgactcccgcgtcaggcgtaagttcaagggat 209
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct: 26085009 agccaagctggcgcaggcccaagggtattgactcccgtgtcaggagaaagttcaagggat 26085068
Query: 210 gcaccttgatgcccaacatcggatatggctccgacaagaagaccaggcactaccttccca 269
||||||||||||||||||| || || ||||| ||||||||||||||||||||||| ||||
Sbjct: 26085069 gcaccttgatgcccaacattggttacggctcagacaagaagaccaggcactacctcccca 26085128
Query: 270 acaagttcaaaaagtttgttgttcacaatgtctccgagctggagctgctgctgatgcaca 329
|||||||||| |||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct: 26085129 acaagttcaagaagtttgtggtgcacaatgtctctgagctggagttgctcatgatgcaca 26085188
Query: 330 acagg 334
|||||
Sbjct: 26085189 acagg 26085193
Score = 135 bits (68), Expect = 4e-029
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 60 agatggcggtgccgctgctgacgcagaagatcgtgaagaagagggtcaagcagttcaaga 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 26083854 agatggcggtgccgctgctgacgaagaagatcgtgaagaagagggtcaagcagttcaaga 26083913
Query: 120 ggccccatcttgaccgctac 139
|||||||| ||||||||||
Sbjct: 26083914 ggccccatagtgaccgctac 26083933
Score = 121 bits (61), Expect = 5e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 329 aacaggacttactgcgctgagatcgcccacaacgtgtccacccgcaagcgcaaggagatt 388
|||||||| ||||| || ||||| ||||||||||| || || ||||||||||||||
Sbjct: 26085310 aacaggacctactgtgccgagattgcccacaacgtctctacgaagaagcgcaaggagatc 26085369
Query: 389 gtggagcgtgctgcgcaactggacatcgtggtcaccaacaagctcgccaggctccgcagc 448
|| |||||||||||||| || ||||||||||||||||||||||| || |||||||| |||
Sbjct: 26085370 gttgagcgtgctgcgcagctcgacatcgtggtcaccaacaagcttgcaaggctccgtagc 26085429
Query: 449 caagaggacgagt 461
|| ||||||||||
Sbjct: 26085430 caggaggacgagt 26085442
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 891,102
Number of Sequences: 438736
Number of extensions: 891102
Number of successful extensions: 5301
Number of sequences better than 0.5: 84
Number of HSP's better than 0.5 without gapping: 77
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4965
Number of HSP's gapped (non-prelim): 267
length of query: 691
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 670
effective length of database: 2,791,206,460
effective search space: 1870108328200
effective search space used: 1870108328200
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)