BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2618988.2.1
(631 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA... 377 e-102
gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) c... 377 e-102
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 377 e-102
ref|XM_463421.1| Oryza sativa (japonica cultivar-group), p... 377 e-102
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 377 e-102
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 377 e-102
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 377 e-102
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 377 e-102
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 377 e-102
dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-018
dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-018
dbj|AP002843.2| Oryza sativa (japonica cultivar-group) geno... 100 2e-018
gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) c... 100 2e-018
gb|AACV01002299.1| Oryza sativa (japonica cultivar-group) c... 100 2e-018
ref|NM_191562.1| Oryza sativa (japonica cultivar-group), p... 100 2e-018
ref|NM_192840.1| Oryza sativa (japonica cultivar-group), p... 100 2e-018
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 100 2e-018
dbj|AP003560.2| Oryza sativa (japonica cultivar-group) geno... 100 2e-018
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 100 2e-018
gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 ... 96 3e-017
ref|XM_469705.1| Oryza sativa (japonica cultivar-group), mRNA 96 3e-017
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 96 3e-017
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 96 3e-017
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 96 3e-017
gb|AC093094.3| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AK107291.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
dbj|AP003705.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
dbj|AP005296.5| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01016586.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
ref|NM_186324.2| Oryza sativa (japonica cultivar-group), mRNA 84 1e-013
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 84 1e-013
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 82 4e-013
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 82 4e-013
dbj|AP006525.2| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 82 4e-013
gb|AACV01007901.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
gb|AACV01020395.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 82 4e-013
gb|AACV01001935.1| Oryza sativa (japonica cultivar-group) c... 80 2e-012
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 80 2e-012
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 80 2e-012
ref|NM_192249.1| Oryza sativa (japonica cultivar-group), p... 80 2e-012
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 78 6e-012
gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 ... 78 6e-012
gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) c... 78 6e-012
ref|XM_470041.1| Oryza sativa (japonica cultivar-group), mRNA 78 6e-012
ref|XM_474134.1| Oryza sativa (japonica cultivar-group), p... 78 6e-012
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 78 6e-012
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 78 6e-012
emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromoso... 78 6e-012
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 78 6e-012
gb|CB672082.1|CB672082 OSJNEe05P01.r OSJNEe Oryza sativa (j... 76 3e-011
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-011
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 76 3e-011
dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbar... 74 1e-010
gb|AACV01006675.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|AU077934.1|AU077934 AU077934 Rice callus Oryza sativa (j... 72 4e-010
dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chro... 72 4e-010
dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chro... 72 4e-010
dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA... 72 4e-010
dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA... 72 4e-010
dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA... 72 4e-010
dbj|AP005186.4| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 72 4e-010
gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
gb|AACV01016313.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA 72 4e-010
dbj|AP003617.3| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
dbj|AP004571.3| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (... 70 2e-009
gb|CB637106.1|CB637106 OSJNEa03E20.r OSJNEa Oryza sativa (j... 70 2e-009
dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chro... 70 2e-009
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 70 2e-009
dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 70 2e-009
ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA 70 2e-009
ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA 70 2e-009
ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-... 70 2e-009
ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-... 70 2e-009
ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-... 70 2e-009
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 70 2e-009
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AK108266.1| Oryza sativa (japonica cultivar-group) cDNA... 68 6e-009
gb|AACV01001845.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
gb|AACV01010588.1| Oryza sativa (japonica cultivar-group) c... 68 6e-009
ref|NM_192834.1| Oryza sativa (japonica cultivar-group), p... 68 6e-009
dbj|AP003328.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-009
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 68 6e-009
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 66 2e-008
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 66 2e-008
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 66 2e-008
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 66 2e-008
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 66 2e-008
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 66 2e-008
gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (j... 66 2e-008
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 66 2e-008
gb|CA754538.1|CA754538 BR030001000_PLATE_C03_19_020.ab1 OA ... 64 1e-007
gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (j... 64 1e-007
gb|AC108756.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK064298.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK066551.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK099365.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK103355.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01020288.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01023672.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AC108761.2| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
ref|NM_191569.1| Oryza sativa (japonica cultivar-group), p... 64 1e-007
ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 64 1e-007
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 64 1e-007
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401265.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|CB648148.1|CB648148 OSJNEb11G14.r OSJNEb Oryza sativa (j... 62 4e-007
dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-007
gb|AACV01011018.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
ref|XM_476066.1| Oryza sativa (japonica cultivar-group), p... 62 4e-007
ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA 62 4e-007
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 62 4e-007
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|AC130610.3| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
dbj|AP005515.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
ref|NT_107236.1| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|AACV01013586.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01016244.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01016314.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01029669.1| Oryza sativa (japonica cultivar-group) C... 60 2e-006
dbj|AP006050.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
ref|XM_478152.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 60 2e-006
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|CH402161.1| Oryza sativa (japonica cultivar-group) scaff... 60 2e-006
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CB668004.1|CB668004 OSJNEd15K03.r OSJNEd Oryza sativa (j... 58 6e-006
dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA... 58 6e-006
dbj|AP004557.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|AC113332.2| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
dbj|AP003504.1| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|AACV01001757.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01012495.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
gb|AACV01018756.1| Oryza sativa (japonica cultivar-group) c... 58 6e-006
ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 58 6e-006
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 58 6e-006
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 58 6e-006
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 58 6e-006
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 58 6e-006
gb|AU078176.1|AU078176 AU078176 Rice callus Oryza sativa (j... 56 2e-005
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 56 2e-005
dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA... 56 2e-005
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
gb|AACV01001755.1| Oryza sativa (japonica cultivar-group) c... 56 2e-005
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 56 2e-005
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_463383.1| Oryza sativa (japonica cultivar-group), p... 56 2e-005
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-005
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 56 2e-005
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 56 2e-005
gb|AU097595.1|AU097595 AU097595 Rice callus Oryza sativa (j... 54 9e-005
dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK063307.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK071136.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK071910.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK099026.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK105398.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK105917.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK119905.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
dbj|AK121682.1| Oryza sativa (japonica cultivar-group) cDNA... 54 9e-005
gb|AC079887.17| Oryza sativa (japonica cultivar-group) chro... 54 9e-005
gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 ... 54 9e-005
gb|AC144738.2| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 54 9e-005
gb|AACV01007731.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01007956.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01011011.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01014443.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
gb|AACV01020286.1| Oryza sativa (japonica cultivar-group) c... 54 9e-005
ref|NM_191561.1| Oryza sativa (japonica cultivar-group), p... 54 9e-005
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 54 9e-005
ref|XM_469427.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|XM_469830.1| Oryza sativa (japonica cultivar-group), mRNA 54 9e-005
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 54 9e-005
gb|AC091670.7| Oryza sativa (japonica cultivar-group) chrom... 54 9e-005
gb|CB684577.1|CB684577 OSJNEf14D24.f OSJNEf Oryza sativa (j... 52 4e-004
dbj|AP003997.1| Oryza sativa (japonica cultivar-group) chro... 52 4e-004
dbj|AK060997.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK068336.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK072018.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK106006.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AP005643.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
dbj|AP004300.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|AACV01004805.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01013582.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01016249.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01016252.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01016995.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01018758.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
dbj|AP005695.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
ref|XM_466458.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|XM_469829.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|XM_478159.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|XM_478166.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|XM_479471.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 52 4e-004
ref|XM_506345.1| PREDICTED Oryza sativa (japonica cultivar-... 52 4e-004
dbj|AP005190.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 52 4e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|AQ843589.1|AQ843589 nbxb0024I17f CUGI Rice BAC Library O... 50 0.001
gb|AU032902.1|AU032902 AU032902 Rice green shoot Oryza sati... 50 0.001
gb|CB641583.1|CB641583 OSJNEb01E21.r OSJNEb Oryza sativa (j... 50 0.001
gb|AU067881.2|AU067881 AU067881 Rice callus Oryza sativa (j... 50 0.001
dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK110876.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbar... 50 0.001
gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 ... 50 0.001
gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbar... 50 0.001
dbj|AP004045.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
dbj|AP005008.3| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|AACV01003571.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01006094.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01007694.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
gb|AACV01016235.1| Oryza sativa (japonica cultivar-group) c... 50 0.001
ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478130.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|XM_478140.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.001
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 50 0.001
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 50 0.001
dbj|AP004348.4| Oryza sativa (japonica cultivar-group) geno... 50 0.001
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.001
gb|C72832.1|C72832 C72832 Rice panicle at flowering stage O... 48 0.006
gb|AU182357.1|AU182357 AU182357 Rice panicle at flowering s... 48 0.006
dbj|AP005677.1| Oryza sativa (japonica cultivar-group) chro... 48 0.006
dbj|AK063342.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AK070948.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.006
dbj|AP005178.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 48 0.006
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 48 0.006
gb|AACV01002757.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01010148.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01011010.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01015581.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01020281.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01022743.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
dbj|AP006860.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
ref|NM_186853.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.006
ref|NM_190780.1| Oryza sativa (japonica cultivar-group), p... 48 0.006
dbj|AP005183.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003235.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
dbj|AP003286.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromoso... 48 0.006
gb|AU055724.1|AU055724 AU055724 Oryza sativa mature leaf Ni... 46 0.023
gb|AU055875.1|AU055875 AU055875 Oryza sativa mature leaf Ni... 46 0.023
gb|CB645782.1|CB645782 OSJNEb07M02.r OSJNEb Oryza sativa (j... 46 0.023
gb|CB653368.1|CB653368 OSJNEc04F11.r OSJNEc Oryza sativa (j... 46 0.023
gb|CB659466.1|CB659466 OSJNEc16H18.r OSJNEc Oryza sativa (j... 46 0.023
gb|CB664715.1|CB664715 OSJNEd10J18.r OSJNEd Oryza sativa (j... 46 0.023
gb|CB666604.1|CB666604 OSJNEd13J04.r OSJNEd Oryza sativa (j... 46 0.023
gb|CB684060.1|CB684060 OSJNEf13D14.f OSJNEf Oryza sativa (j... 46 0.023
gb|CB684061.1|CB684061 OSJNEf13D14.r OSJNEf Oryza sativa (j... 46 0.023
gb|CO435680.1|CO435680 OsMR746 5MT resistant rice mutant cD... 46 0.023
gb|CV728477.1|CV728477 COLD--01-J03.b1 Cold treated rice le... 46 0.023
dbj|AK060965.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK109806.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
dbj|AK121202.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.023
emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC O... 46 0.023
gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 ... 46 0.023
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 ... 46 0.023
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 46 0.023
dbj|AP003514.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP004738.3| Oryza sativa (japonica cultivar-group) geno... 46 0.023
dbj|AP005917.2| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|AACV01002304.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01003586.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01003715.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01008121.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01008244.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01009084.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01010151.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01013201.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
gb|AACV01025266.1| Oryza sativa (japonica cultivar-group) c... 46 0.023
ref|NM_191572.1| Oryza sativa (japonica cultivar-group), p... 46 0.023
ref|XM_469828.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.023
ref|XM_470006.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.023
ref|XM_471491.1| Oryza sativa (japonica cultivar-group), p... 46 0.023
ref|XM_473231.1| Oryza sativa (japonica cultivar-group), p... 46 0.023
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 46 0.023
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 46 0.023
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromoso... 46 0.023
emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromoso... 46 0.023
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 46 0.023
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.023
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 44 0.090
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 44 0.090
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 44 0.090
gb|AU183565.1|AU183565 AU183565 Rice callus (2001) Oryza sa... 44 0.090
gb|CB647590.1|CB647590 OSJNEb10J08.r OSJNEb Oryza sativa (j... 44 0.090
gb|CB648866.1|CB648866 OSJNEb12H17.r OSJNEb Oryza sativa (j... 44 0.090
gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (j... 44 0.090
gb|CB679383.1|CB679383 OSJNEf02N03.r OSJNEf Oryza sativa (j... 44 0.090
gb|CF326158.1|CF326158 JMT1--05-E05.g1 AtJMT-overexpressing... 44 0.090
dbj|AK060228.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.090
dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.090
dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.090
dbj|AP005501.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-grou... 44 0.090
gb|AC131374.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbar... 44 0.090
dbj|AP004560.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 44 0.090
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 44 0.090
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01005446.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01011408.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01016231.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01016246.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01021221.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
gb|AACV01021651.1| Oryza sativa (japonica cultivar-group) c... 44 0.090
ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|NM_195768.1| Oryza sativa (japonica cultivar-group) put... 44 0.090
ref|NM_195769.1| Oryza sativa (japonica cultivar-group) put... 44 0.090
ref|NM_196703.1| Oryza sativa (japonica cultivar-group) put... 44 0.090
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 44 0.090
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.090
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|XM_478126.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|XM_478153.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|XM_480272.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.090
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.090
ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.090
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.090
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.090
gb|AQ860883.1|AQ860883 nbeb0015L24f CUGI Rice BAC Library (... 42 0.36
gb|AQ868140.1|AQ868140 nbeb0021H12r CUGI Rice BAC Library (... 42 0.36
gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (j... 42 0.36
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 42 0.36
gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (j... 42 0.36
gb|CB654109.1|CB654109 OSJNEc05M06.r OSJNEc Oryza sativa (j... 42 0.36
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 42 0.36
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 42 0.36
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 42 0.36
gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (j... 42 0.36
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 42 0.36
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 42 0.36
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 42 0.36
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 42 0.36
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 42 0.36
gb|CB682805.1|CB682805 OSJNEf10H21.f OSJNEf Oryza sativa (j... 42 0.36
gb|CB682806.1|CB682806 OSJNEf10H21.r OSJNEf Oryza sativa (j... 42 0.36
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 42 0.36
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 42 0.36
gb|CV721921.1|CV721921 YBH--05-M14.b1 Rice before heading y... 42 0.36
dbj|AP006053.1| Oryza sativa (japonica cultivar-group) chro... 42 0.36
dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK071127.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.36
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
dbj|AP004864.3| Oryza sativa (japonica cultivar-group) geno... 42 0.36
dbj|AP005171.3| Oryza sativa (japonica cultivar-group) geno... 42 0.36
ref|NT_107110.1| Oryza sativa (japonica cultivar-group) gen... 42 0.36
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 42 0.36
dbj|AP005915.3| Oryza sativa (japonica cultivar-group) geno... 42 0.36
gb|AACV01003584.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
gb|AACV01003585.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
gb|AACV01004348.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
gb|AACV01013614.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
gb|AACV01015374.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 42 0.36
dbj|AP005659.2| Oryza sativa (japonica cultivar-group) geno... 42 0.36
dbj|AP006584.3| Oryza sativa (japonica cultivar-group) geno... 42 0.36
ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.36
ref|XM_465758.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.36
ref|XM_477034.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.36
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 42 0.36
ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-... 42 0.36
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 42 0.36
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 42 0.36
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.36
>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
insert sequence
Length = 1727
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Minus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 1466 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 1407
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 1406 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 1347
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 1346 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 1287
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 1286 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 1227
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 1226 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 1167
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 1166 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 1107
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 1106 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 1047
Query: 623 gctccggcg 631
|||||||||
Sbjct: 1046 gctccggcg 1038
>gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002157, whole
genome shotgun sequence
Length = 8100
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 3133 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 3192
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 3193 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 3252
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 3253 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 3312
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 3313 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 3372
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 3373 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 3432
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 3433 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 3492
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 3493 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 3552
Query: 623 gctccggcg 631
|||||||||
Sbjct: 3553 gctccggcg 3561
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 28922182 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 28922241
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 28922242 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 28922301
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 28922302 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 28922361
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 28922362 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 28922421
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 28922422 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 28922481
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 28922482 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 28922541
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 28922542 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 28922601
Query: 623 gctccggcg 631
|||||||||
Sbjct: 28922602 gctccggcg 28922610
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 30741919 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 30741860
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 30741859 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 30741800
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 30741799 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 30741740
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30741739 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30741690
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 24815183 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 24815124
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 24815123 cgagttccacccgcagtgcgacacgaacccgccgacgg 24815086
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 30745725 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 30745667
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 30745666 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 30745607
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 30745606 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 30745548
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30745547 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30745501
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 25690976 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 25690917
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 25690916 agtgcgtgacgaacccgccgacgg 25690893
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 30750843 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 30750784
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 30750783 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 30750724
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 30750723 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 30750678
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 25673643 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 25673584
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 25673583 tgcgtcacgaacccgccgacgg 25673562
Score = 69.9 bits (35), Expect = 2e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| |||||||| |||||||| |||||| ||||
Sbjct: 28382768 gagttccacccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacgcgccgc 28382709
Query: 541 tgc 543
|||
Sbjct: 28382708 tgc 28382706
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 24787256 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 24787315
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 24787316 cgagttccacccgcagtgcgacaagaaccctcccacgg 24787353
Score = 63.9 bits (32), Expect = 1e-007
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 415 agccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcc 474
|||| |||||||||||| |||||||| | |||||||||||| | ||| | |||||||
Sbjct: 30769406 agcctctgctccgcgtacagcggccagcagatcatcggcacgccggacatgatcgcctcc 30769465
Query: 475 aggaccgagttccagccgcagtgcgtcacgaa 506
|| ||||||||| |||||||||||||||||
Sbjct: 30769466 agcgacgagttccacccgcagtgcgtcacgaa 30769497
Score = 58.0 bits (29), Expect = 6e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23539714 gcggccatgtcaccatcggcacgccggcgctcacggcctccagcgtcgagttccacccgc 23539655
Query: 494 agtgcgtcacgaa 506
||||||| |||||
Sbjct: 23539654 agtgcgttacgaa 23539642
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | |||||| || ||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23532171 gcggccaggtcaccattgggacgccggcgctcacggcctccagcgtcgagttccacccgc 23532112
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||||||||| ||||| ||||
Sbjct: 23532111 agtgcgtcacgaacccgccgacgg 23532088
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 465 caccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4150273 caccgcctccagcgtcgagttccacccgcagtgcgtcacgaagc 4150316
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 30730523 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 30730464
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 30730463 cgagttccacccgcagtgcgtcacgaa 30730437
Score = 54.0 bits (27), Expect = 9e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
||||||||||||| || ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 28378323 cggcacgcccgccgccagcgcctccgtggtcgagttccacccgcagtgcgtcacgaagc 28378265
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 479 ccgagttccagccgcagtgcgtcacgaa 506
|||||||||| |||||||||||||||||
Sbjct: 37756870 ccgagttccacccgcagtgcgtcacgaa 37756897
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 30786523 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 30786582
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 30786583 cgagttccacccgcagtgcgtgacgaa 30786609
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1455
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Minus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 1405 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 1346
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 1345 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 1286
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 1285 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 1226
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 1225 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 1166
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 1165 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 1106
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 1105 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 1046
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 1045 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 986
Query: 623 gctccggcg 631
|||||||||
Sbjct: 985 gctccggcg 977
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 3369565 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 3369624
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 3369625 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 3369684
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 3369685 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 3369744
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 3369745 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 3369804
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 3369805 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 3369864
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 3369865 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 3369924
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 3369925 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 3369984
Query: 623 gctccggcg 631
|||||||||
Sbjct: 3369985 gctccggcg 3369993
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 5189302 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 5189243
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 5189242 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 5189183
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 5189182 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 5189123
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 5189122 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 5189073
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 5193108 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 5193050
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 5193049 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 5192990
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 5192989 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 5192931
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 5192930 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 5192884
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 138359 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 138300
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 138299 agtgcgtgacgaacccgccgacgg 138276
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 5198226 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 5198167
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 5198166 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 5198107
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 5198106 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 5198061
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 121026 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 120967
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 120966 tgcgtcacgaacccgccgacgg 120945
Score = 69.9 bits (35), Expect = 2e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| |||||||| |||||||| |||||| ||||
Sbjct: 2830151 gagttccacccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacgcgccgc 2830092
Query: 541 tgc 543
|||
Sbjct: 2830091 tgc 2830089
Score = 63.9 bits (32), Expect = 1e-007
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 415 agccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcc 474
|||| |||||||||||| |||||||| | |||||||||||| | ||| | |||||||
Sbjct: 5216789 agcctctgctccgcgtacagcggccagcagatcatcggcacgccggacatgatcgcctcc 5216848
Query: 475 aggaccgagttccagccgcagtgcgtcacgaa 506
|| ||||||||| |||||||||||||||||
Sbjct: 5216849 agcgacgagttccacccgcagtgcgtcacgaa 5216880
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 5177906 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 5177847
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 5177846 cgagttccacccgcagtgcgtcacgaa 5177820
Score = 54.0 bits (27), Expect = 9e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
||||||||||||| || ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 2825706 cggcacgcccgccgccagcgcctccgtggtcgagttccacccgcagtgcgtcacgaagc 2825648
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 479 ccgagttccagccgcagtgcgtcacgaa 506
|||||||||| |||||||||||||||||
Sbjct: 12204253 ccgagttccacccgcagtgcgtcacgaa 12204280
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 5233906 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 5233965
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 5233966 cgagttccacccgcagtgcgtgacgaa 5233992
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1116_H09
Length = 110086
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 59555 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 59614
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 59615 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 59674
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 59675 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 59734
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 59735 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 59794
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 59795 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 59854
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 59855 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 59914
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 59915 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 59974
Query: 623 gctccggcg 631
|||||||||
Sbjct: 59975 gctccggcg 59983
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 3301406 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 3301465
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 3301466 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 3301525
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 3301526 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 3301585
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 3301586 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 3301645
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 3301646 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 3301705
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 3301706 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 3301765
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 3301766 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 3301825
Query: 623 gctccggcg 631
|||||||||
Sbjct: 3301826 gctccggcg 3301834
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 5102229 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 5102170
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 5102169 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 5102110
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 5102109 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 5102050
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 5102049 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 5102000
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 5106034 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 5105976
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 5105975 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 5105916
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 5105915 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 5105857
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 5105856 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 5105810
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 181065 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 181006
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 181005 agtgcgtgacgaacccgccgacgg 180982
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 5111152 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 5111093
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 5111092 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 5111033
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 5111032 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 5110987
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 140703 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 140644
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 140643 tgcgtcacgaacccgccgacgg 140622
Score = 67.9 bits (34), Expect = 6e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
|||||||| ||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 2763221 gagttccacccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacg 2763168
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 5090934 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 5090875
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 5090874 cgagttccacccgcagtgcgtcacgaa 5090848
Score = 54.0 bits (27), Expect = 9e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
||||||||||||| || ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 2758771 cggcacgcccgccgccagcgcctccgtggtcgagttccacccgcagtgcgtcacgaagc 2758713
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 479 ccgagttccagccgcagtgcgtcacgaa 506
|||||||||| |||||||||||||||||
Sbjct: 11934064 ccgagttccacccgcagtgcgtcacgaa 11934091
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 5129655 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 5129714
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 5129715 cgagttccacccgcagtgcgtgacgaa 5129741
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 28503127 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 28503186
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 28503187 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 28503246
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 28503247 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 28503306
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 28503307 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 28503366
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 28503367 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 28503426
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 28503427 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 28503486
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 28503487 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 28503546
Query: 623 gctccggcg 631
|||||||||
Sbjct: 28503547 gctccggcg 28503555
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 30303950 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 30303891
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 30303890 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 30303831
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 30303830 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 30303771
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30303770 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30303721
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 24348463 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 24348404
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 24348403 cgagttccacccgcagtgcgacacgaacccgccgacgg 24348366
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 30307755 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 30307697
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 30307696 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 30307637
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 30307636 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 30307578
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30307577 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30307531
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 25382786 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 25382727
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 25382726 agtgcgtgacgaacccgccgacgg 25382703
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 30312873 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 30312814
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 30312813 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 30312754
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 30312753 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 30312708
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 25342424 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 25342365
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 25342364 tgcgtcacgaacccgccgacgg 25342343
Score = 67.9 bits (34), Expect = 6e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
|||||||| ||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 27964942 gagttccacccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacg 27964889
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 24320197 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 24320256
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 24320257 cgagttccacccgcagtgcgacaagaaccctcccacgg 24320294
Score = 58.0 bits (29), Expect = 6e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23021102 gcggccatgtcaccatcggcacgccggcgctcacggcctccagcgtcgagttccacccgc 23021043
Query: 494 agtgcgtcacgaa 506
||||||| |||||
Sbjct: 23021042 agtgcgttacgaa 23021030
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | |||||| || ||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23011713 gcggccaggtcaccattgggacgccggcgctcacggcctccagcgtcgagttccacccgc 23011654
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||||||||| ||||| ||||
Sbjct: 23011653 agtgcgtcacgaacccgccgacgg 23011630
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 465 caccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4189996 caccgcctccagcgtcgagttccacccgcagtgcgtcacgaagc 4190039
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 30292655 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 30292596
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 30292595 cgagttccacccgcagtgcgtcacgaa 30292569
Score = 54.0 bits (27), Expect = 9e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
||||||||||||| || ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 27960492 cggcacgcccgccgccagcgcctccgtggtcgagttccacccgcagtgcgtcacgaagc 27960434
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 479 ccgagttccagccgcagtgcgtcacgaa 506
|||||||||| |||||||||||||||||
Sbjct: 37135785 ccgagttccacccgcagtgcgtcacgaa 37135812
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 30331376 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 30331435
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 30331436 cgagttccacccgcagtgcgtgacgaa 30331462
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 377 bits (190), Expect = e-102
Identities = 369/429 (86%), Gaps = 6/429 (1%)
Strand = Plus / Plus
Query: 209 cctccgactcaccgccctcacgcagcgcgtccttggcctgccgcatggccgccagcgtgc 268
|||||||||| ||||| || |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 28841512 cctccgactcgccgccgtcgcgcagcgccgccttcgcccgccgcatggccgccagcgtcc 28841571
Query: 269 gcttccggagcatcctcccgccatcggactccaagagccatcgcaccttggcagcaacct 328
||| | ||||| ||||||||| |||||||||| ||||| |||||||| || || ||||
Sbjct: 28841572 gctccaggagcgccctcccgccgtcggactccatcagccaccgcaccttcgccgccacct 28841631
Query: 329 cctcggccgccacgatgccctc------gtcgctgtcgtacccttccacggccacggcca 382
|||| ||| |||| | ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 28841632 cctccgccttcacggtcccctccccgacgtcgtcgtcgtacccttccaccgccacggcca 28841691
Query: 383 gctgcatctccttctccaggaacacccggttgagccgctgctccgcgtagagcggccacg 442
|| |||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||
Sbjct: 28841692 gccgcatctccttctccaggaacaccctgttcatccgctgctccgcgtacagcggccacg 28841751
Query: 443 ccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtca 502
||| |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||
Sbjct: 28841752 ccagcatcggcacgccggccacgatcgactccagcaccgagttccacccgcagtgcgtca 28841811
Query: 503 cgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgcccacgacctgacca 562
||||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 28841812 cgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgcggcgcccacgacttgacga 28841871
Query: 563 cgagacccctatccttggtccgggccaggaacccctccgggaggagcgcgtcaaggtccg 622
|||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||| |
Sbjct: 28841872 cgagccccctgcccttggtccgctccaggaaccccttggggaggagcgcgtccaggtcgg 28841931
Query: 623 gctccggcg 631
|||||||||
Sbjct: 28841932 gctccggcg 28841940
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 30661249 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 30661190
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 30661189 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 30661130
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 30661129 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 30661070
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30661069 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30661020
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 24736466 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 24736407
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 24736406 cgagttccacccgcagtgcgacacgaacccgccgacgg 24736369
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 30665055 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 30664997
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 30664996 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 30664937
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 30664936 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 30664878
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 30664877 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 30664831
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 25610756 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 25610697
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 25610696 agtgcgtgacgaacccgccgacgg 25610673
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 30670173 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 30670114
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 30670113 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 30670054
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 30670053 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 30670008
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 25593423 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 25593364
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 25593363 tgcgtcacgaacccgccgacgg 25593342
Score = 69.9 bits (35), Expect = 2e-009
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| |||||||| |||||||| |||||| ||||
Sbjct: 28302098 gagttccacccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacgcgccgc 28302039
Query: 541 tgc 543
|||
Sbjct: 28302038 tgc 28302036
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 24708539 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 24708598
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 24708599 cgagttccacccgcagtgcgacaagaaccctcccacgg 24708636
Score = 63.9 bits (32), Expect = 1e-007
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 415 agccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcc 474
|||| |||||||||||| |||||||| | |||||||||||| | ||| | |||||||
Sbjct: 30688736 agcctctgctccgcgtacagcggccagcagatcatcggcacgccggacatgatcgcctcc 30688795
Query: 475 aggaccgagttccagccgcagtgcgtcacgaa 506
|| ||||||||| |||||||||||||||||
Sbjct: 30688796 agcgacgagttccacccgcagtgcgtcacgaa 30688827
Score = 58.0 bits (29), Expect = 6e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23460997 gcggccatgtcaccatcggcacgccggcgctcacggcctccagcgtcgagttccacccgc 23460938
Query: 494 agtgcgtcacgaa 506
||||||| |||||
Sbjct: 23460937 agtgcgttacgaa 23460925
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | |||||| || ||||| || |||| |||||||| ||||||||| ||||
Sbjct: 23453454 gcggccaggtcaccattgggacgccggcgctcacggcctccagcgtcgagttccacccgc 23453395
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||||||||| ||||| ||||
Sbjct: 23453394 agtgcgtcacgaacccgccgacgg 23453371
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 465 caccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4152471 caccgcctccagcgtcgagttccacccgcagtgcgtcacgaagc 4152514
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 30649853 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 30649794
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 30649793 cgagttccacccgcagtgcgtcacgaa 30649767
Score = 54.0 bits (27), Expect = 9e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
||||||||||||| || ||||||| | ||||||||| |||||||||||||||||||
Sbjct: 28297653 cggcacgcccgccgccagcgcctccgtggtcgagttccacccgcagtgcgtcacgaagc 28297595
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 479 ccgagttccagccgcagtgcgtcacgaa 506
|||||||||| |||||||||||||||||
Sbjct: 37676200 ccgagttccacccgcagtgcgtcacgaa 37676227
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 30705853 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 30705912
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 30705913 cgagttccacccgcagtgcgtgacgaa 30705939
>dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D12, full
insert sequence
Length = 1658
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 1350 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 1291
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 1290 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 1231
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 1230 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 1171
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 1170 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 1121
>dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A02, full
insert sequence
Length = 1895
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 1264 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 1205
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 1204 cgagttccacccgcagtgcgacacgaacccgccgacgg 1167
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0407B12
Length = 148762
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 105043 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 104984
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 104983 cgagttccacccgcagtgcgacacgaacccgccgacgg 104946
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 77116 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 77175
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 77176 cgagttccacccgcagtgcgacaagaaccctcccacgg 77213
>gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001848, whole
genome shotgun sequence
Length = 5116
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 1335 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 1276
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 1275 cgagttccacccgcagtgcgacacgaacccgccgacgg 1238
>gb|AACV01002299.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002299, whole
genome shotgun sequence
Length = 23883
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Plus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 9728 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 9787
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 9788 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 9847
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 9848 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 9907
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 9908 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 9957
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 5923 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 5981
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 5982 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 6041
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 6042 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 6100
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 6101 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 6147
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 805 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 864
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 865 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 924
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 925 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 970
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 21023 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 21082
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 21083 cgagttccacccgcagtgcgtcacgaa 21109
>ref|NM_191562.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1416
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 1225 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 1166
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 1165 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 1106
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 1105 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 1046
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 1045 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 996
>ref|NM_192840.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1524
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 1200 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 1141
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 1140 cgagttccacccgcagtgcgacacgaacccgccgacgg 1103
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 7733415 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 7733356
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 7733355 cgagttccacccgcagtgcgacacgaacccgccgacgg 7733318
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 7705488 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 7705547
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 7705548 cgagttccacccgcagtgcgacaagaaccctcccacgg 7705585
Score = 58.0 bits (29), Expect = 6e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||| ||||
Sbjct: 6457946 gcggccatgtcaccatcggcacgccggcgctcacggcctccagcgtcgagttccacccgc 6457887
Query: 494 agtgcgtcacgaa 506
||||||| |||||
Sbjct: 6457886 agtgcgttacgaa 6457874
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | |||||| || ||||| || |||| |||||||| ||||||||| ||||
Sbjct: 6450403 gcggccaggtcaccattgggacgccggcgctcacggcctccagcgtcgagttccacccgc 6450344
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||||||||| ||||| ||||
Sbjct: 6450343 agtgcgtcacgaacccgccgacgg 6450320
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1060H01
Length = 157987
Score = 99.6 bits (50), Expect = 2e-018
Identities = 185/230 (80%)
Strand = Plus / Minus
Query: 356 tgtcgtacccttccacggccacggccagctgcatctccttctccaggaacacccggttga 415
|||| ||||||||||| |||||||||| ||||||| | | ||| ||||||| ||| |
Sbjct: 103526 tgtcatacccttccaccgccacggccaagcgcatctcttccaccaagaacaccttgttca 103467
Query: 416 gccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcca 475
|| |||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||| |
Sbjct: 103466 tcctctgctccgcgtataacggccatgccagcatgggcacccccgctgtgaccgcctcta 103407
Query: 476 ggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgt 535
||||||||||| || ||||| |||||||| || ||||| | | ||| ||||||| |
Sbjct: 103406 acaccgagttccatccacagtgtgtcacgaacccacccaccgcaccatgctccagcacct 103347
Query: 536 cccgctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| || ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 103346 cgcgttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 103297
Score = 85.7 bits (43), Expect = 3e-014
Identities = 185/227 (81%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 361 tacccttccacggccacggccagctgcatctccttct-ccaggaacacccggttgagccg 419
||||||||||| |||||||||| ||||||| |||| ||| ||||||| ||| | ||
Sbjct: 107332 tacccttccaccgccacggccaagcgcatctc-ttctaccaagaacaccttgttcatcct 107274
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | | ||||||||| |
Sbjct: 107273 ctgctccgcgtacaacggccatgccagcatgggcactcccgctgtgagcgcctccagcat 107214
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgc-gtgcgccagcacgtccc 538
||||||||| || ||||| |||||||| |||||||| | ||| ||| ||||||| | |
Sbjct: 107213 cgagttccatccacagtgtgtcacgaacccgcccaccg-cgctatgctccagcaccttgc 107155
Query: 539 gctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
| ||||| ||||||||| |||||||||| ||||| |||||||||||
Sbjct: 107154 gttgcggtgcccacgacatgaccacgagcccccttcccttggtccgg 107108
Score = 75.8 bits (38), Expect = 3e-011
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| | |||||| |||| ||| ||||| ||||| | |||||||||| ||
Sbjct: 112450 ctgctccgcgtacaacggccatgccagcatgggcacccccgctgtgaccgcctccaacac 112391
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| || ||||| | |||||| |||||||| | ||||| ||||||| || ||
Sbjct: 112390 cgagttccatccacagtgtgacacgaacccgcccaccgcaccgtgctccagcacctcgcg 112331
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgg 585
||||| | ||||| |||||||||| ||||| |||||||||||
Sbjct: 112330 ttgcggtgaacacgatatgaccacgagcccccttcccttggtccgg 112285
Score = 63.9 bits (32), Expect = 1e-007
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 415 agccgctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctcc 474
|||| |||||||||||| |||||||| | |||||||||||| | ||| | |||||||
Sbjct: 131013 agcctctgctccgcgtacagcggccagcagatcatcggcacgccggacatgatcgcctcc 131072
Query: 475 aggaccgagttccagccgcagtgcgtcacgaa 506
|| ||||||||| |||||||||||||||||
Sbjct: 131073 agcgacgagttccacccgcagtgcgtcacgaa 131104
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| ||||||| || ||||||||| |||||| | | ||||||| |
Sbjct: 92130 ctgctccgcgtactgcggccagcacagcatcggcacccccgccgtgatgccctccagcgc 92071
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 92070 cgagttccacccgcagtgcgtcacgaa 92044
Score = 46.1 bits (23), Expect = 0.023
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| || || |||||| |||||| | | | |||||||
Sbjct: 148130 ctgctccgcgtacagcggccagcacagcagcggcacccccgccgtgatcccctccagcgt 148189
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| ||||||||||| |||||
Sbjct: 148190 cgagttccacccgcagtgcgtgacgaa 148216
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 99.6 bits (50), Expect = 2e-018
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 7723340 ctgctcggcgtagagcggccacgccaccatcggcacgcccgccgccacggtctccagcgt 7723281
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| |||||| ||||| ||||
Sbjct: 7723280 cgagttccacccgcagtgcgacacgaacccgccgacgg 7723243
Score = 67.9 bits (34), Expect = 6e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | ||||||||||||| | |||||||||||||| | | ||||||||
Sbjct: 7695074 ctgctccgcgaacagcggccacgccagcgtcggcacgcccgccgacgcggcctccagcgt 7695133
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacgg 517
||||||||| |||||||||| || ||| || |||||||
Sbjct: 7695134 cgagttccacccgcagtgcgacaagaaccctcccacgg 7695171
Score = 58.0 bits (29), Expect = 6e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | ||||||||||||||| || |||| |||||||| ||||||||| ||||
Sbjct: 6395979 gcggccatgtcaccatcggcacgccggcgctcacggcctccagcgtcgagttccacccgc 6395920
Query: 494 agtgcgtcacgaa 506
||||||| |||||
Sbjct: 6395919 agtgcgttacgaa 6395907
Score = 56.0 bits (28), Expect = 2e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||| | |||||| || ||||| || |||| |||||||| ||||||||| ||||
Sbjct: 6386590 gcggccaggtcaccattgggacgccggcgctcacggcctccagcgtcgagttccacccgc 6386531
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||||||||| ||||| ||||
Sbjct: 6386530 agtgcgtcacgaacccgccgacgg 6386507
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
sequence
Length = 130359
Score = 95.6 bits (48), Expect = 3e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 109515 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 109574
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| ||||||||| || ||||||||||
Sbjct: 109575 cagtgcgacacgaaggcgcccaccgacgggtgggccagcacggccagctgcggcgc 109630
>ref|XM_469705.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1467
Score = 95.6 bits (48), Expect = 3e-017
Identities = 99/116 (85%)
Strand = Plus / Minus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 1154 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 1095
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| ||||||||| || ||||||||||
Sbjct: 1094 cagtgcgacacgaaggcgcccaccgacgggtgggccagcacggccagctgcggcgc 1039
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 95.6 bits (48), Expect = 3e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 3624338 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 3624397
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| ||||||||| || ||||||||||
Sbjct: 3624398 cagtgcgacacgaaggcgcccaccgacgggtgggccagcacggccagctgcggcgc 3624453
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||||||||||||||| |||| ||| ||||||||| |||||||||||
Sbjct: 1204682 cgagttccagccgcagtgggtcaggaacgcgcccacggcggcgtgcgccag 1204732
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 788379 cgcctccagggtggagttccagccgcagtgcgtgacgaagc 788339
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 95.6 bits (48), Expect = 3e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 30409257 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 30409316
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| ||||||||| || ||||||||||
Sbjct: 30409317 cagtgcgacacgaaggcgcccaccgacgggtgggccagcacggccagctgcggcgc 30409372
Score = 77.8 bits (39), Expect = 6e-012
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagcc 509
||||||||| ||| | |||||||||| ||||||||||| |||||||| |||||||| |
Sbjct: 33575649 cggcacgccggccgccgccgcctccagcaccgagttccacccgcagtgggtcacgaacgc 33575590
Query: 510 gcccacggacgcgtgcgccagcacgtcccgctgcggcgcccac 552
|||||| |||| ||| |||||||| || ||||||| ||||||
Sbjct: 33575589 gcccaccgacgggtgggccagcaccgccagctgcggggcccac 33575547
Score = 73.8 bits (37), Expect = 1e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||| ||||| |||||| || |||||||||| ||||||||| ||||
Sbjct: 13750345 gcggccacgccaccaccggcagccccgccgtcgccgcctccagcgtcgagttccacccgc 13750286
Query: 494 agtgcgtcacgaa 506
|||||||||||||
Sbjct: 13750285 agtgcgtcacgaa 13750273
Score = 54.0 bits (27), Expect = 9e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| |||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 31081627 cgagttccacccgcagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 31081681
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||||||||||||||| |||| ||| ||||||||| |||||||||||
Sbjct: 27994307 cgagttccagccgcagtgggtcaggaacgcgcccacggcggcgtgcgccag 27994357
Score = 52.0 bits (26), Expect = 4e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 472 tccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagc 531
|||| ||| ||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct: 31078985 tccacgacggagttccagccgcagtgggagacgaagcacgccgtggacgcgtgcgccagc 31079044
Query: 532 acgtcccgctgcgg 545
||| |||||||||
Sbjct: 31079045 acgcgccgctgcgg 31079058
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 27577982 cgcctccagggtggagttccagccgcagtgcgtgacgaagc 27577942
Score = 50.1 bits (25), Expect = 0.001
Identities = 106/133 (79%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | | ||||||||||| || |||||| || ||| | |||||||| ||
Sbjct: 5817574 ctgctccgcgaacaccggccacgccagcaccggcaccccggccgccgccgcctccgtcac 5817515
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|| | ||| ||||||||||||||||| ||||||| | ||||||| |||||| ||
Sbjct: 5817514 cgcgccccacccgcagtgcgtcacgaacgcgcccaccgccgcgtgcctcagcaccgccac 5817455
Query: 540 ctgcggcgcccac 552
|||||||||||||
Sbjct: 5817454 ctgcggcgcccac 5817442
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 35167087 cgagttccacccgcagtgcgtcacgaa 35167113
Score = 46.1 bits (23), Expect = 0.023
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
||||||||||||||||| ||| ||||||| | |||||||| ||||| ||| ||||||
Sbjct: 33385974 ccagccgcagtgcgtcaggaacgcgcccaccgcggcgtgcgcgagcacctccacctgcgg 33386033
Query: 546 cgcccac 552
| |||||
Sbjct: 33386034 cacccac 33386040
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| || ||||||| |||||||| |||||| |||||||||||||||
Sbjct: 31070828 cgagttccacccacagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 31070774
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 95.6 bits (48), Expect = 3e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 30317835 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 30317894
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| ||||||||| || ||||||||||
Sbjct: 30317895 cagtgcgacacgaaggcgcccaccgacgggtgggccagcacggccagctgcggcgc 30317950
Score = 77.8 bits (39), Expect = 6e-012
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagcc 509
||||||||| ||| | |||||||||| ||||||||||| |||||||| |||||||| |
Sbjct: 33485177 cggcacgccggccgccgccgcctccagcaccgagttccacccgcagtgggtcacgaacgc 33485118
Query: 510 gcccacggacgcgtgcgccagcacgtcccgctgcggcgcccac 552
|||||| |||| ||| |||||||| || ||||||| ||||||
Sbjct: 33485117 gcccaccgacgggtgggccagcaccgccagctgcggggcccac 33485075
Score = 73.8 bits (37), Expect = 1e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||| ||||| |||||| || |||||||||| ||||||||| ||||
Sbjct: 13755370 gcggccacgccaccaccggcagccccgccgtcgccgcctccagcgtcgagttccacccgc 13755311
Query: 494 agtgcgtcacgaa 506
|||||||||||||
Sbjct: 13755310 agtgcgtcacgaa 13755298
Score = 54.0 bits (27), Expect = 9e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| |||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 30991104 cgagttccacccgcagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 30991158
Score = 52.0 bits (26), Expect = 4e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 472 tccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagc 531
|||| ||| ||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct: 30988462 tccacgacggagttccagccgcagtgggagacgaagcacgccgtggacgcgtgcgccagc 30988521
Query: 532 acgtcccgctgcgg 545
||| |||||||||
Sbjct: 30988522 acgcgccgctgcgg 30988535
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 27486659 cgcctccagggtggagttccagccgcagtgcgtgacgaagc 27486619
Score = 50.1 bits (25), Expect = 0.001
Identities = 106/133 (79%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | | ||||||||||| || |||||| || ||| | |||||||| ||
Sbjct: 5818361 ctgctccgcgaacaccggccacgccagcaccggcaccccggccgccgccgcctccgtcac 5818302
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|| | ||| ||||||||||||||||| ||||||| | ||||||| |||||| ||
Sbjct: 5818301 cgcgccccacccgcagtgcgtcacgaacgcgcccaccgccgcgtgcctcagcaccgccac 5818242
Query: 540 ctgcggcgcccac 552
|||||||||||||
Sbjct: 5818241 ctgcggcgcccac 5818229
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 35077015 cgagttccacccgcagtgcgtcacgaa 35077041
Score = 46.1 bits (23), Expect = 0.023
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
||||||||||||||||| ||| ||||||| | |||||||| ||||| ||| ||||||
Sbjct: 33295464 ccagccgcagtgcgtcaggaacgcgcccaccgcggcgtgcgcgagcacctccacctgcgg 33295523
Query: 546 cgcccac 552
| |||||
Sbjct: 33295524 cacccac 33295530
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| || ||||||| |||||||| |||||| |||||||||||||||
Sbjct: 30980305 cgagttccacccacagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 30980251
>gb|AC093094.3| Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBb0088N21, 4 unordered pieces
Length = 137967
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 75785 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 75726
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 75725 gatgtccttctgcggcgcccac 75704
>dbj|AK107291.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B11, full
insert sequence
Length = 1688
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 1165 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 1106
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 1105 gatgtccttctgcggcgcccac 1084
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1112_E08
Length = 119926
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 25623 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 25564
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 25563 gatgtccttctgcggcgcccac 25542
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1720_F04
Length = 105227
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 88729 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 88670
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 88669 gatgtccttctgcggcgcccac 88648
>gb|AACV01016586.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016586, whole
genome shotgun sequence
Length = 11467
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 9848 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 9907
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 9908 gatgtccttctgcggcgcccac 9929
>ref|NM_186324.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1688
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 1165 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 1106
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 1105 gatgtccttctgcggcgcccac 1084
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 10158246 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 10158187
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 10158186 gatgtccttctgcggcgcccac 10158165
Score = 71.9 bits (36), Expect = 4e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 6616535 gctgctccgcgtagagcggccacggcaccatcggcacgcc 6616496
Score = 69.9 bits (35), Expect = 2e-009
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgccc-gccatcaccgcctccagg 477
||||||||||||| |||||||||| | ||||||||||||| |||| || ||||||
Sbjct: 6608662 gctgctccgcgtacagcggccacggcgccatcggcacgccgtgcca-caggctctccagc 6608604
Query: 478 accgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||||| |||| ||||||||||||||||||
Sbjct: 6608603 accgagttccacccgccgtgcgtcacgaagccgcc 6608569
Score = 61.9 bits (31), Expect = 4e-007
Identities = 109/135 (80%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| ||||||||||||||| ||||||| ||||| || || | ||||
Sbjct: 6631470 cgagttccacccgccgtgcgtcacgaagcctcccacggcggcgtgggcgaggatgtcctt 6631411
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | ||| | ||||| ||||||||| |||||||||||||
Sbjct: 6631410 ctgcggcgcccacgtcggccacaccatgcccctccccttggtcctctccaggaacccctc 6631351
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 6631350 cgggaggagctcgtc 6631336
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||| |||||||||| ||||| || || | |||| |
Sbjct: 7032422 gagttccacccgcagtgcgtcacgaacccgcccacggcggcgtgggcgaggatgtccttc 7032481
Query: 541 tgcggcgccc 550
||||||||||
Sbjct: 7032482 tgcggcgccc 7032491
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||||||| |||||||||| |||||||| || | |||
Sbjct: 6616474 cgagttccacccgccgtgcgtcacgaacccgcccacggcggcgtgcgcgaggatctcctt 6616415
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 6616414 ctgcggcgcccacg 6616401
Score = 60.0 bits (30), Expect = 2e-006
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 5683532 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 5683590
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 5683591 gctgcggcgcccac 5683604
Score = 58.0 bits (29), Expect = 6e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 6577870 cgctgctccgcgtacagcggccacggcaccagcggcacgcc 6577910
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
||||||||||||| |||||||||| | |||||||||||||
Sbjct: 6631531 gctgctccgcgtacagcggccacggcgccatcggcacgcc 6631492
Score = 54.0 bits (27), Expect = 9e-005
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||||||||| ||| | || ||||| || || | |||
Sbjct: 6577932 cgagttccacccgcagtgcgtcacgaagctgccgatggcggcgtgggcgaggatctcctt 6577991
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | |||||| ||||| ||||||||| ||||||||| |||
Sbjct: 6577992 ctgcggcgcccacgtcggccacacgagccccctccccttggtcctctccaggaaccactc 6578051
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 6578052 cgggaggagctcgtc 6578066
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
||||||||||||||| |||||| || || ||||| |||||| |||| |||||||||||
Sbjct: 15999746 cgccaccatcggcacccccgccgacatcgactccatcaccgagctccacccgcagtgcgt 15999805
Query: 501 ca 502
||
Sbjct: 15999806 ca 15999807
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||| ||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 5774178 cgagttccacccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 5774120
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 5774119 gctgcggcgcccac 5774106
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || |||||||||||
Sbjct: 5727947 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtccc 5727889
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 5727888 gctgcggcgcccac 5727875
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 5603673 cagcacgtcccgctgcggcgcccac 5603649
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 5544552 cagcacgtcccgctgcggcgcccac 5544528
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||||||
Sbjct: 5694677 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtcca 5694735
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 5694736 gctgcggcgcccac 5694749
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||| |||
Sbjct: 5516320 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgcccc 5516262
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 5516261 gctgcggcgcccac 5516248
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 587 ccaggaacccctccgggaggagcgcgtcaaggt 619
||||||||||||| ||||||||| |||| ||||
Sbjct: 6608494 ccaggaacccctcggggaggagctcgtcgaggt 6608462
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 7982319 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 7982260
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 7982259 gatgtccttctgcggcgcccac 7982238
Score = 71.9 bits (36), Expect = 4e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 4554333 gctgctccgcgtagagcggccacggcaccatcggcacgcc 4554294
Score = 69.9 bits (35), Expect = 2e-009
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgccc-gccatcaccgcctccagg 477
||||||||||||| |||||||||| | ||||||||||||| |||| || ||||||
Sbjct: 4546460 gctgctccgcgtacagcggccacggcgccatcggcacgccgtgcca-caggctctccagc 4546402
Query: 478 accgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||||| |||| ||||||||||||||||||
Sbjct: 4546401 accgagttccacccgccgtgcgtcacgaagccgcc 4546367
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||| |||||||||| ||||| || || | |||| |
Sbjct: 4961912 gagttccacccgcagtgcgtcacgaacccgcccacggcggcgtgggcgaggatgtccttc 4961971
Query: 541 tgcggcgccc 550
||||||||||
Sbjct: 4961972 tgcggcgccc 4961981
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| ||||||||||||||| ||||||| ||||| || || | ||||
Sbjct: 4568882 cgagttccacccgccgtgcgtcacgaagcctcccacggcggcgtgggcgaggatgtcctt 4568823
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 4568822 ctgcggcgcccacg 4568809
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||||||| |||||||||| |||||||| || | |||
Sbjct: 4554272 cgagttccacccgccgtgcgtcacgaacccgcccacggcggcgtgcgcgaggatctcctt 4554213
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 4554212 ctgcggcgcccacg 4554199
Score = 60.0 bits (30), Expect = 2e-006
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 3727886 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 3727944
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 3727945 gctgcggcgcccac 3727958
Score = 58.0 bits (29), Expect = 6e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 4521782 cgctgctccgcgtacagcggccacggcaccagcggcacgcc 4521822
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
||||||||||||| |||||||||| | |||||||||||||
Sbjct: 4568943 gctgctccgcgtacagcggccacggcgccatcggcacgcc 4568904
Score = 54.0 bits (27), Expect = 9e-005
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||||||||| ||| | || ||||| || || | |||
Sbjct: 4521844 cgagttccacccgcagtgcgtcacgaagctgccgatggcggcgtgggcgaggatctcctt 4521903
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | |||||| ||||| ||||||||| ||||||||| |||
Sbjct: 4521904 ctgcggcgcccacgtcggccacacgagccccctccccttggtcctctccaggaaccactc 4521963
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 4521964 cgggaggagctcgtc 4521978
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
||||||||||||||| |||||| || || ||||| |||||| |||| |||||||||||
Sbjct: 13971431 cgccaccatcggcacccccgccgacatcgactccatcaccgagctccacccgcagtgcgt 13971490
Query: 501 ca 502
||
Sbjct: 13971491 ca 13971492
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||| ||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 3802432 cgagttccacccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 3802374
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 3802373 gctgcggcgcccac 3802360
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || |||||||||||
Sbjct: 3776716 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtccc 3776658
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 3776657 gctgcggcgcccac 3776644
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 3656220 cagcacgtcccgctgcggcgcccac 3656196
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||||||
Sbjct: 3742157 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtcca 3742215
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 3742216 gctgcggcgcccac 3742229
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||| |||
Sbjct: 3626047 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgcccc 3625989
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 3625988 gctgcggcgcccac 3625975
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 587 ccaggaacccctccgggaggagcgcgtcaaggt 619
||||||||||||| ||||||||| |||| ||||
Sbjct: 4546292 ccaggaacccctcggggaggagctcgtcgaggt 4546260
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 21381758 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 21381699
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 21381698 gatgtccttctgcggcgcccac 21381677
Score = 71.9 bits (36), Expect = 4e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 17953772 gctgctccgcgtagagcggccacggcaccatcggcacgcc 17953733
Score = 69.9 bits (35), Expect = 2e-009
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgccc-gccatcaccgcctccagg 477
||||||||||||| |||||||||| | ||||||||||||| |||| || ||||||
Sbjct: 17945899 gctgctccgcgtacagcggccacggcgccatcggcacgccgtgcca-caggctctccagc 17945841
Query: 478 accgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||||| |||| ||||||||||||||||||
Sbjct: 17945840 accgagttccacccgccgtgcgtcacgaagccgcc 17945806
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||||||||||| ||| ||||| | || || ||||||||| |||||||
Sbjct: 7814432 cgagttccacccgcagtgcgtccagaacccgccgatggccgggtgcgccaggacgtccct 7814373
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 7814372 ctgcggcgccca 7814361
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||| |||||||||| ||||| || || | |||| |
Sbjct: 18361351 gagttccacccgcagtgcgtcacgaacccgcccacggcggcgtgggcgaggatgtccttc 18361410
Query: 541 tgcggcgccc 550
||||||||||
Sbjct: 18361411 tgcggcgccc 18361420
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| ||||||||||||||| ||||||| ||||| || || | ||||
Sbjct: 17968321 cgagttccacccgccgtgcgtcacgaagcctcccacggcggcgtgggcgaggatgtcctt 17968262
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 17968261 ctgcggcgcccacg 17968248
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||||||| |||||||||| |||||||| || | |||
Sbjct: 17953711 cgagttccacccgccgtgcgtcacgaacccgcccacggcggcgtgcgcgaggatctcctt 17953652
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 17953651 ctgcggcgcccacg 17953638
Score = 60.0 bits (30), Expect = 2e-006
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 17127325 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 17127383
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17127384 gctgcggcgcccac 17127397
Score = 58.0 bits (29), Expect = 6e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 17921221 cgctgctccgcgtacagcggccacggcaccagcggcacgcc 17921261
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
||||||||||||| |||||||||| | |||||||||||||
Sbjct: 17968382 gctgctccgcgtacagcggccacggcgccatcggcacgcc 17968343
Score = 54.0 bits (27), Expect = 9e-005
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||||||||| ||| | || ||||| || || | |||
Sbjct: 17921283 cgagttccacccgcagtgcgtcacgaagctgccgatggcggcgtgggcgaggatctcctt 17921342
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | |||||| ||||| ||||||||| ||||||||| |||
Sbjct: 17921343 ctgcggcgcccacgtcggccacacgagccccctccccttggtcctctccaggaaccactc 17921402
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 17921403 cgggaggagctcgtc 17921417
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
||||||||||||||| |||||| || || ||||| |||||| |||| |||||||||||
Sbjct: 27370870 cgccaccatcggcacccccgccgacatcgactccatcaccgagctccacccgcagtgcgt 27370929
Query: 501 ca 502
||
Sbjct: 27370930 ca 27370931
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||| ||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 17201871 cgagttccacccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 17201813
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17201812 gctgcggcgcccac 17201799
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || |||||||||||
Sbjct: 17176155 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtccc 17176097
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17176096 gctgcggcgcccac 17176083
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 17055659 cagcacgtcccgctgcggcgcccac 17055635
Score = 48.1 bits (24), Expect = 0.006
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||| ||||| ||||| | | |||| ||||||||| ||
Sbjct: 8287573 cgagttccacccgctgtgcgtcaggaagcaccccaccgccctgtgccgcagcacgtcgcg 8287632
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 8287633 ctgcggcgccca 8287644
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||||||
Sbjct: 17141596 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtcca 17141654
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17141655 gctgcggcgcccac 17141668
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||| |||
Sbjct: 17025486 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgcccc 17025428
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17025427 gctgcggcgcccac 17025414
Score = 44.1 bits (22), Expect = 0.090
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtc 501
||||||||||||||||||||||
Sbjct: 7749648 cgagttccagccgcagtgcgtc 7749627
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 587 ccaggaacccctccgggaggagcgcgtcaaggt 619
||||||||||||| ||||||||| |||| ||||
Sbjct: 17945731 ccaggaacccctcggggaggagctcgtcgaggt 17945699
Score = 42.1 bits (21), Expect = 0.36
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
||||||||||||||||| ||| |||| |||| |||||||||||
Sbjct: 5436699 ccagccgcagtgcgtcaggaacgcgccgacggcggcgtgcgccag 5436655
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 83.8 bits (42), Expect = 1e-013
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 471 ctccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 22545241 ctccagcaccgagttccagccgcagtgcgtcacgaacccgcccacggcggcgtgtcccag 22545182
Query: 531 cacgtcccgctgcggcgcccac 552
| |||| |||||||||||||
Sbjct: 22545181 gatgtccttctgcggcgcccac 22545160
Score = 71.9 bits (36), Expect = 4e-010
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 18993460 gctgctccgcgtagagcggccacggcaccatcggcacgcc 18993421
Score = 69.9 bits (35), Expect = 2e-009
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgccc-gccatcaccgcctccagg 477
||||||||||||| |||||||||| | ||||||||||||| |||| || ||||||
Sbjct: 18985587 gctgctccgcgtacagcggccacggcgccatcggcacgccgtgcca-caggctctccagc 18985529
Query: 478 accgagttccagccgcagtgcgtcacgaagccgcc 512
||||||||||| |||| ||||||||||||||||||
Sbjct: 18985528 accgagttccacccgccgtgcgtcacgaagccgcc 18985494
Score = 63.9 bits (32), Expect = 1e-007
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||||||||||| ||| ||||| | || || ||||||||| |||||||
Sbjct: 7945373 cgagttccacccgcagtgcgtccagaacccgccgatggccgggtgcgccaggacgtccct 7945314
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 7945313 ctgcggcgccca 7945302
Score = 61.9 bits (31), Expect = 4e-007
Identities = 109/135 (80%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| ||||||||||||||| ||||||| ||||| || || | ||||
Sbjct: 19008395 cgagttccacccgccgtgcgtcacgaagcctcccacggcggcgtgggcgaggatgtcctt 19008336
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | ||| | ||||| ||||||||| |||||||||||||
Sbjct: 19008335 ctgcggcgcccacgtcggccacaccatgcccctccccttggtcctctccaggaacccctc 19008276
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 19008275 cgggaggagctcgtc 19008261
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||| |||||||||| ||||| || || | |||| |
Sbjct: 19409347 gagttccacccgcagtgcgtcacgaacccgcccacggcggcgtgggcgaggatgtccttc 19409406
Query: 541 tgcggcgccc 550
||||||||||
Sbjct: 19409407 tgcggcgccc 19409416
Score = 60.0 bits (30), Expect = 2e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||||||| |||||||||| |||||||| || | |||
Sbjct: 18993399 cgagttccacccgccgtgcgtcacgaacccgcccacggcggcgtgcgcgaggatctcctt 18993340
Query: 540 ctgcggcgcccacg 553
||||||||||||||
Sbjct: 18993339 ctgcggcgcccacg 18993326
Score = 60.0 bits (30), Expect = 2e-006
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 18060457 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 18060515
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 18060516 gctgcggcgcccac 18060529
Score = 58.0 bits (29), Expect = 6e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 418 cgctgctccgcgtagagcggccacgccaccatcggcacgcc 458
|||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 18954795 cgctgctccgcgtacagcggccacggcaccagcggcacgcc 18954835
Score = 56.0 bits (28), Expect = 2e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 419 gctgctccgcgtagagcggccacgccaccatcggcacgcc 458
||||||||||||| |||||||||| | |||||||||||||
Sbjct: 19008456 gctgctccgcgtacagcggccacggcgccatcggcacgcc 19008417
Score = 54.0 bits (27), Expect = 9e-005
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||||||||| ||| | || ||||| || || | |||
Sbjct: 18954857 cgagttccacccgcagtgcgtcacgaagctgccgatggcggcgtgggcgaggatctcctt 18954916
Query: 540 ctgcggcgcccacgacctgaccacgagacccctatccttggtccgggccaggaacccctc 599
|||||||||||||| | |||||| ||||| ||||||||| ||||||||| |||
Sbjct: 18954917 ctgcggcgcccacgtcggccacacgagccccctccccttggtcctctccaggaaccactc 18954976
Query: 600 cgggaggagcgcgtc 614
|||||||||| ||||
Sbjct: 18954977 cgggaggagctcgtc 18954991
Score = 52.0 bits (26), Expect = 4e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
||||||||||||||| |||||| || || ||||| |||||| |||| |||||||||||
Sbjct: 28386741 cgccaccatcggcacccccgccgacatcgactccatcaccgagctccacccgcagtgcgt 28386800
Query: 501 ca 502
||
Sbjct: 28386801 ca 28386802
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcg-tgcgccagcacgtccc 538
||||||||| ||| |||||||| ||||| ||||||| |||| ||| |||||||||||
Sbjct: 18151103 cgagttccacccggcgtgcgtcaggaagcaccccacgg-cgcggtgccgcagcacgtccc 18151045
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 18151044 gctgcggcgcccac 18151031
Score = 52.0 bits (26), Expect = 4e-004
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || |||||||||||
Sbjct: 18104872 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtccc 18104814
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 18104813 gctgcggcgcccac 18104800
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 17980598 cagcacgtcccgctgcggcgcccac 17980574
Score = 50.1 bits (25), Expect = 0.001
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 528 cagcacgtcccgctgcggcgcccac 552
|||||||||||||||||||||||||
Sbjct: 17921477 cagcacgtcccgctgcggcgcccac 17921453
Score = 48.1 bits (24), Expect = 0.006
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| |||| |||||||| ||||| ||||| | | |||| ||||||||| ||
Sbjct: 8380212 cgagttccacccgctgtgcgtcaggaagcaccccaccgccctgtgccgcagcacgtcgcg 8380271
Query: 540 ctgcggcgccca 551
||||||||||||
Sbjct: 8380272 ctgcggcgccca 8380283
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||||||
Sbjct: 18071602 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgtcca 18071660
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 18071661 gctgcggcgcccac 18071674
Score = 44.1 bits (22), Expect = 0.090
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgc-cagcacgtccc 538
||||||||||||| |||||||| ||||| ||||||| |||| || ||||||| |||
Sbjct: 17893245 cgagttccagccggcgtgcgtcaggaagcaccccacgg-cgcggtggcgcagcacgcccc 17893187
Query: 539 gctgcggcgcccac 552
||||||||||||||
Sbjct: 17893186 gctgcggcgcccac 17893173
Score = 44.1 bits (22), Expect = 0.090
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtc 501
||||||||||||||||||||||
Sbjct: 7872134 cgagttccagccgcagtgcgtc 7872113
Score = 42.1 bits (21), Expect = 0.36
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 587 ccaggaacccctccgggaggagcgcgtcaaggt 619
||||||||||||| ||||||||| |||| ||||
Sbjct: 18985419 ccaggaacccctcggggaggagctcgtcgaggt 18985387
Score = 42.1 bits (21), Expect = 0.36
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
||||||||||||||||| ||| |||| |||| |||||||||||
Sbjct: 5530823 ccagccgcagtgcgtcaggaacgcgccgacggcggcgtgcgccag 5530779
>gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10G04 3', mRNA sequence
Length = 772
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 477 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 536
Query: 541 tgcgg 545
|||||
Sbjct: 537 tgcgg 541
>gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11G13 3', mRNA sequence
Length = 772
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 476 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 535
Query: 541 tgcgg 545
|||||
Sbjct: 536 tgcgg 540
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0498F03
Length = 54025
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 9324 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 9265
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 9264 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 9220
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 2492 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 2433
Query: 541 tgcgg 545
|||||
Sbjct: 2432 tgcgg 2428
>ref|NT_107075.1| Oryza sativa (japonica cultivar-group)
Length = 389359
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 344658 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 344599
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 344598 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 344554
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 330017 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 329958
Query: 541 tgcgg 545
|||||
Sbjct: 329957 tgcgg 329953
Score = 65.9 bits (33), Expect = 2e-008
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || | || ||||||| ||||||||| |||||||||||
Sbjct: 317670 cgccaccatcggcacgccggcgaccagcgcctccgccgtcgagttccacccgcagtgcgt 317611
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|| ||||| |||||||| | ||| |||||||| ||| |||||||
Sbjct: 317610 caggaagcagcccacggcggggtgggccagcacctccagctgcgg 317566
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 337826 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 337767
Query: 541 tgcgg 545
|||||
Sbjct: 337766 tgcgg 337762
>gb|AACV01007901.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007901, whole
genome shotgun sequence
Length = 11956
Score = 81.8 bits (41), Expect = 4e-013
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 3427 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 3486
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcg-ccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| | |||||||| || ||||||||||
Sbjct: 3487 cagtgcgacacgaaggcgcccaccgacgggtgggcccagcacggccagctgcggcgc 3543
>gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020393, whole
genome shotgun sequence
Length = 17450
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 4226 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 4167
Query: 541 tgcgg 545
|||||
Sbjct: 4166 tgcgg 4162
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 12036 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 11977
Query: 541 tgcgg 545
|||||
Sbjct: 11976 tgcgg 11972
>gb|AACV01020395.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020395, whole
genome shotgun sequence
Length = 3459
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 3187 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 3246
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 3247 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 3291
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0217C03
Length = 58309
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 42262 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 42203
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 42202 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 42158
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 27621 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 27562
Query: 541 tgcgg 545
|||||
Sbjct: 27561 tgcgg 27557
Score = 65.9 bits (33), Expect = 2e-008
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || | || ||||||| ||||||||| |||||||||||
Sbjct: 15274 cgccaccatcggcacgccggcgaccagcgcctccgccgtcgagttccacccgcagtgcgt 15215
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|| ||||| |||||||| | ||| |||||||| ||| |||||||
Sbjct: 15214 caggaagcagcccacggcggggtgggccagcacctccagctgcgg 15170
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 35430 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 35371
Query: 541 tgcgg 545
|||||
Sbjct: 35370 tgcgg 35366
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 9439709 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 9439650
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 9439649 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 9439605
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 9425348 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 9425289
Query: 541 tgcgg 545
|||||
Sbjct: 9425288 tgcgg 9425284
Score = 63.9 bits (32), Expect = 1e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 447 catcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||| | | | ||||||| ||||||||||| |||||||||||||||||
Sbjct: 7898578 catcggcacgcccgcggtgatcccctccagcaccgagttccacccgcagtgcgtcacgaa 7898637
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||| ||| |
Sbjct: 9410555 cgagttccacccgcagtgcgtcaggaagcagcccacggcggggtgggccagcacctccag 9410496
Query: 540 ctgcgg 545
||||||
Sbjct: 9410495 ctgcgg 9410490
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| | ||||||||| ||||| | | | |||| || ||
Sbjct: 7880573 ctgctccgcgtacagcggccagcagagcatcggcacccccgcggtgatcccctctagcac 7880632
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 7880633 cgagttccacccgcagtgcgtcacgaa 7880659
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 9433158 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 9433099
Query: 541 tgcgg 545
|||||
Sbjct: 9433098 tgcgg 9433094
Score = 48.1 bits (24), Expect = 0.006
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 447 catcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||| | | | | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 7854911 catcggcacgcccgcggtgatcccttccagtaccgagttccacccgcagtgtgtcacgaa 7854970
Score = 44.1 bits (22), Expect = 0.090
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 586 gccaggaacccctccgggaggagcgcgtcaaggt 619
|||| |||||||||||| ||||||||||| ||||
Sbjct: 7898717 gccaagaacccctccggtaggagcgcgtcgaggt 7898750
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 81.8 bits (41), Expect = 4e-013
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 4003712 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 4003771
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcg-ccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| | |||||||| || ||||||||||
Sbjct: 4003772 cagtgcgacacgaaggcgcccaccgacgggtgggcccagcacggccagctgcggcgc 4003828
Score = 77.8 bits (39), Expect = 6e-012
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagcc 509
||||||||| ||| | |||||||||| ||||||||||| |||||||| |||||||| |
Sbjct: 7202413 cggcacgccggccgccgccgcctccagcaccgagttccacccgcagtgggtcacgaacgc 7202354
Query: 510 gcccacggacgcgtgcgccagcacgtcccgctgcggcgcccac 552
|||||| |||| ||| |||||||| || ||||||| ||||||
Sbjct: 7202353 gcccaccgacgggtgggccagcaccgccagctgcggggcccac 7202311
Score = 54.0 bits (27), Expect = 9e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| |||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 4635785 cgagttccacccgcagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 4635839
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||||||||||||||| |||| ||| ||||||||| |||||||||||
Sbjct: 1682635 cgagttccagccgcagtgggtcaggaacgcgcccacggcggcgtgcgccag 1682685
Score = 52.0 bits (26), Expect = 4e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 472 tccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagc 531
|||| ||| ||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct: 4633143 tccacgacggagttccagccgcagtgggagacgaagcacgccgtggacgcgtgcgccagc 4633202
Query: 532 acgtcccgctgcgg 545
||| |||||||||
Sbjct: 4633203 acgcgccgctgcgg 4633216
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 1236250 cgcctccagggtggagttccagccgcagtgcgtgacgaagc 1236210
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 8799922 cgagttccacccgcagtgcgtcacgaa 8799948
Score = 46.1 bits (23), Expect = 0.023
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
||||||||||||||||| ||| ||||||| | |||||||| ||||| ||| ||||||
Sbjct: 7017790 ccagccgcagtgcgtcaggaacgcgcccaccgcggcgtgcgcgagcacctccacctgcgg 7017849
Query: 546 cgcccac 552
| |||||
Sbjct: 7017850 cacccac 7017856
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| || ||||||| |||||||| |||||| |||||||||||||||
Sbjct: 4624986 cgagttccacccacagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 4624932
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 18913520 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 18913461
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 18913460 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 18913416
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 18899159 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 18899100
Query: 541 tgcgg 545
|||||
Sbjct: 18899099 tgcgg 18899095
Score = 63.9 bits (32), Expect = 1e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 447 catcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||| | | | ||||||| ||||||||||| |||||||||||||||||
Sbjct: 17372389 catcggcacgcccgcggtgatcccctccagcaccgagttccacccgcagtgcgtcacgaa 17372448
Score = 60.0 bits (30), Expect = 2e-006
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
||||||||| ||||||||||||| ||||| |||||||| | ||| |||||||| ||| |
Sbjct: 18884366 cgagttccacccgcagtgcgtcaggaagcagcccacggcggggtgggccagcacctccag 18884307
Query: 540 ctgcgg 545
||||||
Sbjct: 18884306 ctgcgg 18884301
Score = 54.0 bits (27), Expect = 9e-005
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||||| |||||||| | ||||||||| ||||| | | | |||| || ||
Sbjct: 17354384 ctgctccgcgtacagcggccagcagagcatcggcacccccgcggtgatcccctctagcac 17354443
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 17354444 cgagttccacccgcagtgcgtcacgaa 17354470
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 18906969 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 18906910
Query: 541 tgcgg 545
|||||
Sbjct: 18906909 tgcgg 18906905
Score = 48.1 bits (24), Expect = 0.006
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 447 catcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||| | | | | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 17328722 catcggcacgcccgcggtgatcccttccagtaccgagttccacccgcagtgtgtcacgaa 17328781
Score = 44.1 bits (22), Expect = 0.090
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 586 gccaggaacccctccgggaggagcgcgtcaaggt 619
|||| |||||||||||| ||||||||||| ||||
Sbjct: 17372528 gccaagaacccctccggtaggagcgcgtcgaggt 17372561
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 81.8 bits (41), Expect = 4e-013
Identities = 99/117 (84%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 433 agcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccg 492
||||||||||||| || ||||||||| || | |||||||||| |||||| |||| |||
Sbjct: 31269875 agcggccacgccagcaccggcacgccggcggacgccgcctccagcaccgagctccacccg 31269934
Query: 493 cagtgcgtcacgaagccgcccacggacgcgtgcg-ccagcacgtcccgctgcggcgc 548
||||||| ||||||| ||||||| |||| ||| | |||||||| || ||||||||||
Sbjct: 31269935 cagtgcgacacgaaggcgcccaccgacgggtgggcccagcacggccagctgcggcgc 31269991
Score = 77.8 bits (39), Expect = 6e-012
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 450 cggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaagcc 509
||||||||| ||| | |||||||||| ||||||||||| |||||||| |||||||| |
Sbjct: 34468576 cggcacgccggccgccgccgcctccagcaccgagttccacccgcagtgggtcacgaacgc 34468517
Query: 510 gcccacggacgcgtgcgccagcacgtcccgctgcggcgcccac 552
|||||| |||| ||| |||||||| || ||||||| ||||||
Sbjct: 34468516 gcccaccgacgggtgggccagcaccgccagctgcggggcccac 34468474
Score = 73.8 bits (37), Expect = 1e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||| ||||| |||||| || |||||||||| ||||||||| ||||
Sbjct: 14415624 gcggccacgccaccaccggcagccccgccgtcgccgcctccagcgtcgagttccacccgc 14415565
Query: 494 agtgcgtcacgaa 506
|||||||||||||
Sbjct: 14415564 agtgcgtcacgaa 14415552
Score = 54.0 bits (27), Expect = 9e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| |||||||||| |||||||| |||||| |||||||||||||||
Sbjct: 31901948 cgagttccacccgcagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 31902002
Score = 54.0 bits (27), Expect = 9e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccag 530
|||||||||||||||||| |||| ||| ||||||||| |||||||||||
Sbjct: 28948798 cgagttccagccgcagtgggtcaggaacgcgcccacggcggcgtgcgccag 28948848
Score = 52.0 bits (26), Expect = 4e-004
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 472 tccaggaccgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagc 531
|||| ||| ||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct: 31899306 tccacgacggagttccagccgcagtgggagacgaagcacgccgtggacgcgtgcgccagc 31899365
Query: 532 acgtcccgctgcgg 545
||| |||||||||
Sbjct: 31899366 acgcgccgctgcgg 31899379
Score = 50.1 bits (25), Expect = 0.001
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 468 cgcctccaggaccgagttccagccgcagtgcgtcacgaagc 508
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 28502413 cgcctccagggtggagttccagccgcagtgcgtgacgaagc 28502373
Score = 50.1 bits (25), Expect = 0.001
Identities = 106/133 (79%)
Strand = Plus / Minus
Query: 420 ctgctccgcgtagagcggccacgccaccatcggcacgcccgccatcaccgcctccaggac 479
|||||||||| | | ||||||||||| || |||||| || ||| | |||||||| ||
Sbjct: 6043532 ctgctccgcgaacaccggccacgccagcaccggcaccccggccgccgccgcctccgtcac 6043473
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccg 539
|| | ||| ||||||||||||||||| ||||||| | ||||||| |||||| ||
Sbjct: 6043472 cgcgccccacccgcagtgcgtcacgaacgcgcccaccgccgcgtgcctcagcaccgccac 6043413
Query: 540 ctgcggcgcccac 552
|||||||||||||
Sbjct: 6043412 ctgcggcgcccac 6043400
Score = 46.1 bits (23), Expect = 0.023
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 480 cgagttccagccgcagtgcgtcacgaa 506
||||||||| |||||||||||||||||
Sbjct: 36066085 cgagttccacccgcagtgcgtcacgaa 36066111
Score = 46.1 bits (23), Expect = 0.023
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 486 ccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
||||||||||||||||| ||| ||||||| | |||||||| ||||| ||| ||||||
Sbjct: 34283953 ccagccgcagtgcgtcaggaacgcgcccaccgcggcgtgcgcgagcacctccacctgcgg 34284012
Query: 546 cgcccac 552
| |||||
Sbjct: 34284013 cacccac 34284019
Score = 46.1 bits (23), Expect = 0.023
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 480 cgagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacg 534
||||||||| || ||||||| |||||||| |||||| |||||||||||||||
Sbjct: 31891149 cgagttccacccacagtgcgacacgaagcacgccacggcggcgtgcgccagcacg 31891095
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 81.8 bits (41), Expect = 4e-013
Identities = 89/105 (84%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || |||||||||||| ||||||||| |||||||||||
Sbjct: 19935176 cgccaccatcggcacgccggcgctcaccgcctccaccgtcgagttccacccgcagtgcgt 19935117
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 19935116 cacgaagcacccgacggcgccgtgcgccagcacctccagctgcgg 19935072
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| ||
Sbjct: 19920535 gagttccagccgcagtgcgtcacgaagcagcccacggcggcgtgcgcgagcacctccagc 19920476
Query: 541 tgcgg 545
|||||
Sbjct: 19920475 tgcgg 19920471
Score = 65.9 bits (33), Expect = 2e-008
Identities = 87/105 (82%)
Strand = Plus / Minus
Query: 441 cgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgt 500
|||||||||||||||||| || | || ||||||| ||||||||| |||||||||||
Sbjct: 19908188 cgccaccatcggcacgccggcgaccagcgcctccgccgtcgagttccacccgcagtgcgt 19908129
Query: 501 cacgaagccgcccacggacgcgtgcgccagcacgtcccgctgcgg 545
|| ||||| |||||||| | ||| |||||||| ||| |||||||
Sbjct: 19908128 caggaagcagcccacggcggggtgggccagcacctccagctgcgg 19908084
Score = 63.9 bits (32), Expect = 1e-007
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 447 catcggcacgcccgccatcaccgcctccaggaccgagttccagccgcagtgcgtcacgaa 506
||||||||||||||| | | | ||||||| ||||||||||| |||||||||||||||||
Sbjct: 18488863 catcggcacgcccgcggtgatcccctccagcaccgagttccacccgcagtgcgtcacgaa 18488922
Score = 50.1 bits (25), Expect = 0.001
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 481 gagttccagccgcagtgcgtcacgaagccgcccacggacgcgtgcgccagcacgtcccgc 540
|||||||| ||||||||||||||||||| ||||| | | ||| |||||||| ||| ||
Sbjct: 19928344 gagttccacccgcagtgcgtcacgaagcaccccacagctgggtgtgccagcacctccagc 19928285
Query: 541 tgcgg 545
|||||
Sbjct: 19928284 tgcgg 19928280
Score = 44.1 bits (22), Expect = 0.090
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 586 gccaggaacccctccgggaggagcgcgtcaaggt 619
|||| |||||||||||| ||||||||||| ||||
Sbjct: 18489002 gccaagaacccctccggtaggagcgcgtcgaggt 18489035
>gb|AACV01001935.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001935, whole
genome shotgun sequence
Length = 8620
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 4834 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 4893
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 4894 agtgcgtgacgaacccgccgacgg 4917
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0004A09
Length = 158826
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 57562 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 57503
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 57502 agtgcgtgacgaacccgccgacgg 57479
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 40229 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 40170
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 40169 tgcgtcacgaacccgccgacgg 40148
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0696E01
Length = 194056
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 434 gcggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgc 493
||||||||||||||||||||||||| || |||| || ||||| || |||||||| ||||
Sbjct: 138359 gcggccacgccaccatcggcacgccagcgctcacggcttccagcacggagttccacccgc 138300
Query: 494 agtgcgtcacgaagccgcccacgg 517
||||||| ||||| ||||| ||||
Sbjct: 138299 agtgcgtgacgaacccgccgacgg 138276
Score = 75.8 bits (38), Expect = 3e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 436 ggccacgccaccatcggcacgcccgccatcaccgcctccaggaccgagttccagccgcag 495
||||||| ||||||||||||||| || |||| |||||||| ||||||||| ||||||
Sbjct: 121026 ggccacgtcaccatcggcacgccggcggtcacggcctccagcgtcgagttccacccgcag 120967
Query: 496 tgcgtcacgaagccgcccacgg 517
||||||||||| ||||| ||||
Sbjct: 120966 tgcgtcacgaacccgccgacgg 120945
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 892,006
Number of Sequences: 438736
Number of extensions: 892006
Number of successful extensions: 8855
Number of sequences better than 0.5: 466
Number of HSP's better than 0.5 without gapping: 524
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 5459
Number of HSP's gapped (non-prelim): 3296
length of query: 631
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 610
effective length of database: 2,791,206,460
effective search space: 1702635940600
effective search space used: 1702635940600
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)