BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591032.2.1
(735 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA... 305 2e-080
gb|AACV01005319.1| Oryza sativa (japonica cultivar-group) c... 305 2e-080
ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA 305 2e-080
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 305 2e-080
dbj|AP004179.3| Oryza sativa (japonica cultivar-group) geno... 305 2e-080
dbj|AP005113.3| Oryza sativa (japonica cultivar-group) geno... 305 2e-080
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 305 2e-080
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 305 2e-080
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 305 2e-080
dbj|AK100261.1| Oryza sativa (japonica cultivar-group) cDNA... 202 2e-049
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 202 2e-049
dbj|AP005761.2| Oryza sativa (japonica cultivar-group) geno... 202 2e-049
gb|AACV01013626.1| Oryza sativa (japonica cultivar-group) c... 202 2e-049
dbj|AP006860.2| Oryza sativa (japonica cultivar-group) geno... 202 2e-049
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 202 2e-049
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 202 2e-049
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 202 2e-049
dbj|AP004001.3| Oryza sativa (japonica cultivar-group) geno... 182 2e-043
dbj|AP005533.3| Oryza sativa (japonica cultivar-group) geno... 182 2e-043
gb|AACV01003918.1| Oryza sativa (japonica cultivar-group) c... 182 2e-043
ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA 182 2e-043
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 182 2e-043
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 182 2e-043
dbj|AK103656.1| Oryza sativa (japonica cultivar-group) cDNA... 174 4e-041
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 174 4e-041
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 174 4e-041
ref|XM_483096.1| Oryza sativa (japonica cultivar-group), mRNA 174 4e-041
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 174 4e-041
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 174 4e-041
dbj|AK101944.1| Oryza sativa (japonica cultivar-group) cDNA... 170 7e-040
gb|AACV01005055.1| Oryza sativa (japonica cultivar-group) c... 170 7e-040
ref|XM_467102.1| Oryza sativa (japonica cultivar-group), mRNA 170 7e-040
dbj|AP004676.3| Oryza sativa (japonica cultivar-group) geno... 170 7e-040
dbj|AP005759.3| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
gb|AACV01020253.1| Oryza sativa (japonica cultivar-group) c... 153 2e-034
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 153 2e-034
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 153 2e-034
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 153 2e-034
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 153 2e-034
gb|C96919.1|C96919 C96919 Rice callus Oryza sativa (japonic... 145 4e-032
dbj|AK100536.1| Oryza sativa (japonica cultivar-group) cDNA... 145 4e-032
gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A1... 145 4e-032
ref|NM_197757.1| Oryza sativa (japonica cultivar-group) put... 145 4e-032
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 145 4e-032
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 145 4e-032
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
gb|AACV01018773.1| Oryza sativa (japonica cultivar-group) c... 141 6e-031
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 141 6e-031
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 141 6e-031
dbj|AK064321.1| Oryza sativa (japonica cultivar-group) cDNA... 137 9e-030
gb|AACV01022113.1| Oryza sativa (japonica cultivar-group) c... 129 2e-027
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 129 2e-027
dbj|AK069983.1| Oryza sativa (japonica cultivar-group) cDNA... 125 4e-026
gb|AACV01000522.1| Oryza sativa (japonica cultivar-group) c... 125 4e-026
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 125 4e-026
ref|NM_188644.1| Oryza sativa (japonica cultivar-group), Oz... 125 4e-026
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 125 4e-026
dbj|AP002481.1| Oryza sativa (japonica cultivar-group) geno... 125 4e-026
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 125 4e-026
gb|AU097427.1|AU097427 AU097427 Rice shoot Oryza sativa (ja... 123 1e-025
dbj|AK102945.1| Oryza sativa (japonica cultivar-group) cDNA... 115 3e-023
gb|AACV01010227.1| Oryza sativa (japonica cultivar-group) c... 115 3e-023
ref|XM_473399.1| Oryza sativa (japonica cultivar-group), p... 115 3e-023
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 115 3e-023
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 115 3e-023
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 115 3e-023
emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC... 115 3e-023
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 115 3e-023
dbj|AK072256.1| Oryza sativa (japonica cultivar-group) cDNA... 113 1e-022
dbj|AK107045.1| Oryza sativa (japonica cultivar-group) cDNA... 113 1e-022
gb|AC118286.2| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|AC105768.2| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|AACV01011342.1| Oryza sativa (japonica cultivar-group) c... 113 1e-022
ref|NT_107226.1| Oryza sativa (japonica cultivar-group) 113 1e-022
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
gb|D15569.1|D15569 RICC0846A Rice callus Oryza sativa (japo... 101 5e-019
gb|C99619.1|C99619 C99619 Rice panicle (longer than 10cm) O... 96 3e-017
ref|NT_107134.1| Oryza sativa (japonica cultivar-group) 90 2e-015
gb|AACV01016684.1| Oryza sativa (japonica cultivar-group) c... 90 2e-015
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 90 2e-015
gb|AC120307.3| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|AU031829.1|AU031829 AU031829 Rice root Oryza sativa (jap... 86 3e-014
gb|C22471.1|C22471 C22471 Rice callus cDNA Oryza sativa (ja... 74 1e-010
dbj|AK122055.1| Oryza sativa (japonica cultivar-group) cDNA... 74 1e-010
emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC O... 74 1e-010
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|AACV01023973.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA... 72 5e-010
dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA... 72 5e-010
dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA... 72 5e-010
gb|AACV01000277.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
dbj|AP003215.3| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA 72 5e-010
ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA 72 5e-010
gb|AQ860104.1|AQ860104 nbeb0014M05f CUGI Rice BAC Library (... 68 7e-009
gb|AACV01001911.1| Oryza sativa (japonica cultivar-group) c... 62 4e-007
dbj|AP004317.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
dbj|AP007251.1| Oryza sativa (japonica cultivar-group) geno... 62 4e-007
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 62 4e-007
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 62 4e-007
gb|C22355.1|C22355 C22355 Rice callus cDNA Oryza sativa (ja... 56 3e-005
dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC O... 56 3e-005
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|AACV01025523.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01025524.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AU172504.1|AU172504 AU172504 Rice panicle at flowering s... 54 1e-004
gb|AU182374.1|AU182374 AU182374 Rice panicle at flowering s... 54 1e-004
gb|CB643769.1|CB643769 OSJNEb04K09.r OSJNEb Oryza sativa (j... 52 4e-004
dbj|AP005588.1| Oryza sativa (japonica cultivar-group) chro... 52 4e-004
dbj|AP005736.1| Oryza sativa (japonica cultivar-group) chro... 52 4e-004
dbj|AP005589.2| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
dbj|AP006441.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AACV01019273.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
ref|XM_450350.1| Oryza sativa (japonica cultivar-group), mRNA 52 4e-004
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 52 4e-004
gb|CH401236.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|AQ365786.2|AQ365786 nbxb0064B05f CUGI Rice BAC Library O... 48 0.007
dbj|AK107126.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Parti... 48 0.007
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 48 0.007
emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC O... 48 0.007
gb|AACV01024886.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
dbj|AK070835.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.11
dbj|AK065005.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.42
gb|AC113339.1| Genomic sequence for Oryza sativa (japonica ... 42 0.42
gb|AC120497.1| Genomic sequence for Oryza sativa, Nipponbar... 42 0.42
gb|AC134240.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|AACV01009691.1| Oryza sativa (japonica cultivar-group) c... 42 0.42
gb|AACV01021138.1| Oryza sativa (japonica cultivar-group) c... 42 0.42
gb|AACV01025337.1| Oryza sativa (japonica cultivar-group) c... 42 0.42
ref|NM_195538.1| Oryza sativa (japonica cultivar-group) put... 42 0.42
ref|NT_080063.1| Oryza sativa (japonica cultivar-group) chr... 42 0.42
ref|NT_107191.1| Oryza sativa (japonica cultivar-group) 42 0.42
gb|CH401249.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
gb|AC096783.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 42 0.42
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.42
>dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J15, full
insert sequence
Length = 2181
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 1940 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 1881
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 1880 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 1821
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 1820 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 1761
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 1760 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 1701
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 1700 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 1641
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1640 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 1581
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 1580 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 1527
>gb|AACV01005319.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005319, whole
genome shotgun sequence
Length = 20741
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 12569 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 12628
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 12629 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 12688
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 12689 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 12748
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 12749 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 12808
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 12809 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 12868
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 12869 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 12928
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 12929 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 12982
>ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2182
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 1941 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 1882
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 1881 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 1822
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 1821 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 1762
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 1761 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 1702
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 1701 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 1642
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1641 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 1582
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 1581 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 1528
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 5321908 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 5321849
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 5321848 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 5321789
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 5321788 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 5321729
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 5321728 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 5321669
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 5321668 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 5321609
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 5321608 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 5321549
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 5321548 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 5321495
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 1579636 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 1579577
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 1579576 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 1579517
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 1579516 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 1579457
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 1579456 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 1579397
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 1579396 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 1579337
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1579336 gccaggtactcgtgcgtccccacgaaggacattgaccg 1579299
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1124_G07
Length = 93240
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 29613 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 29554
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 29553 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 29494
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 29493 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 29434
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 29433 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 29374
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 29373 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 29314
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 29313 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 29254
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 29253 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 29200
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0685G12
Length = 149155
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 136506 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 136447
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 136446 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 136387
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 136386 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 136327
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 136326 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 136267
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 136266 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 136207
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 136206 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 136147
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 136146 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 136093
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 16651890 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 16651831
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 16651830 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 16651771
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 16651770 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 16651711
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 16651710 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 16651651
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 16651650 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 16651591
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 16651590 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 16651531
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 16651530 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 16651477
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 12877442 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 12877383
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 12877382 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 12877323
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 12877322 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 12877263
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 12877262 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 12877203
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 12877202 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 12877143
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 12877142 gccaggtactcgtgcgtccccacgaaggacattgaccg 12877105
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 30104954 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 30104895
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 30104894 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 30104835
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 30104834 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 30104775
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 30104774 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 30104715
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 30104714 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 30104655
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 30104654 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 30104595
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 30104594 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 30104541
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 10720110 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 10720169
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 10720170 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 10720229
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 10720230 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 10720289
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 10720290 acgaacgacatcgacc 10720305
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 26330506 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 26330447
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 26330446 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 26330387
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 26330386 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 26330327
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 26330326 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 26330267
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 26330266 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 26330207
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 26330206 gccaggtactcgtgcgtccccacgaaggacattgaccg 26330169
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 305 bits (154), Expect = 2e-080
Identities = 349/414 (84%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||||||||||||||||||||||||||||||||| || | || | ||||
Sbjct: 30156909 ggcctctcaatctcgacaggctttggtacctccggtgggcttgcacatcggatcaacgcc 30156850
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| || ||||| || ||||| ||||||||||| ||||| ||||| || || ||||| ||
Sbjct: 30156849 cagtttacgccttcgaagaacggatgctgctttatctctgtggcgccgcgtttgtaagct 30156790
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| ||| |||||||||||||||||||| ||||| || |||| ||| || || |||||||||
Sbjct: 30156789 aaccgatgctggggctccttcacaagtagacctcttatcaaatctcttgctgagaagctg 30156730
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||||||||||||||| |||| ||||||||||||||||| || |||| |
Sbjct: 30156729 acaattgggtactccgggaagcgcaatggctgaccaatgacattgaacagtgttgccctg 30156670
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|||| || |||||||| || ||||| || ||||| || || |||||||||| |||||||
Sbjct: 30156669 ttgccagagcccttgaatggtgtctttccaaacagaagttcatacaagaatatcccgaag 30156610
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||
Sbjct: 30156609 gtccaccaatcgacagcgctaccatggccctcgcctttgatgatctctggggccaagtac 30156550
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || || || ||||||||||| |||||||||
Sbjct: 30156549 tcatgtgttccaacaaatgacattgaacgagcatcgctgggctccgctatgagc 30156496
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 10725553 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 10725612
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 10725613 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 10725672
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 10725673 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 10725732
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 10725733 acgaacgacatcgacc 10725748
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 26414637 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 26414578
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 26414577 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 26414518
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 26414517 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 26414458
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 26414457 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 26414398
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 26414397 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 26414338
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 26414337 gccaggtactcgtgcgtccccacgaaggacattgaccg 26414300
>dbj|AK100261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D14, full
insert sequence
Length = 2198
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 1878 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 1819
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 1818 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 1759
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 1758 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 1699
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 1698 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 1639
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 1638 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 1579
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 1578 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 1519
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 1518 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 1465
>ref|NT_107237.1| Oryza sativa (japonica cultivar-group)
Length = 2924261
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 110400 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 110459
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 110460 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 110519
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 110520 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 110579
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 110580 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 110639
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 110640 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 110699
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 110700 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 110759
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 110760 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 110813
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1066D09
Length = 183999
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 70493 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 70552
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 70553 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 70612
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 70613 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 70672
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 70673 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 70732
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 70733 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 70792
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 70793 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 70852
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 70853 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 70906
>gb|AACV01013626.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013626, whole
genome shotgun sequence
Length = 58043
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Minus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 40440 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 40381
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 40380 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 40321
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 40320 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 40261
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 40260 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 40201
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 40200 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 40141
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 40140 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 40081
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 40080 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 40027
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1026E06
Length = 162784
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 110400 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 110459
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 110460 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 110519
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 110520 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 110579
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 110580 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 110639
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 110640 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 110699
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 110700 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 110759
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 110760 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 110813
>gb|CH401210.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000047 genomic
scaffold, whole genome shotgun sequence
Length = 2656042
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 1819154 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 1819213
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 1819214 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 1819273
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 1819274 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 1819333
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 1819334 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 1819393
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 1819394 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 1819453
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 1819454 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 1819513
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 1819514 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 1819567
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 10426806 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 10426865
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 10426866 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 10426925
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 10426926 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 10426985
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 10426986 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 10427045
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 10427046 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 10427105
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 10427106 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 10427165
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 10427166 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 10427219
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 202 bits (102), Expect = 2e-049
Identities = 336/414 (81%)
Strand = Plus / Plus
Query: 322 ggcctctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcc 381
|||||||| ||||| |||||| | || ||||| || ||||||||||| | ||| | |||
Sbjct: 10533786 ggcctctcaatctcaacaggcctgggaacctctggagggcttgcgcagcgtatcaatgcc 10533845
Query: 382 caattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggcc 441
|| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| | ||
Sbjct: 10533846 cagttcacaccctcaaaaaatggatgctgttttatctcagtggcaccacgcttacaaccc 10533905
Query: 442 agccgttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctg 501
| | ||| ||||||||||| || ||||| ||||| || ||||| || |||||||||||
Sbjct: 10533906 aatctttgttggggctccttgacgagcaggcccctaattagatctcttgccgagaagctc 10533965
Query: 502 acggccgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccgg 561
|| ||||||| || |||||||||||| ||||||||||||| |||||||| || || |||
Sbjct: 10533966 acaaccgggtattcagggaagcgcagcggctggccaatgacgttgaacagtgttgcacgg 10534025
Query: 562 ttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaag 621
|| | || || |||||||| || || || ||||| ||||| |||||||||| || |||
Sbjct: 10534026 tttcctgaccctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaag 10534085
Query: 622 gtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtac 681
||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 10534086 gtccaccagtcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtac 10534145
Query: 682 tcgtgcgtcccaacgaacgacatcgaccgtgcgtcgctgggctctgctatgagc 735
|| || || ||||| || ||||| || ||||| || || || || |||||||||
Sbjct: 10534146 tcatgtgtaccaacaaatgacattgagcgtgcatcactaggttccgctatgagc 10534199
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1115_D03
Length = 169378
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 65034 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 65093
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 65094 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 65153
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 65154 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 65213
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 65214 acgaacgacatcgacc 65229
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0018M09
Length = 157377
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 143243 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 143302
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 143303 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 143362
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 143363 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 143422
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 143423 acgaacgacatcgacc 143438
>gb|AACV01003918.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003918, whole
genome shotgun sequence
Length = 36154
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 7481 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 7540
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 7541 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 7600
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 7601 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 7660
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 7661 acgaacgacatcgacc 7676
>ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1494
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 1175 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 1116
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 1115 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 1056
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 1055 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 996
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 995 acgaacgacatcgacc 980
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 4758505 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 4758564
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 4758565 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 4758624
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 4758625 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 4758684
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 4758685 acgaacgacatcgacc 4758700
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 182 bits (92), Expect = 2e-043
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||| ||||||| | ||| |||||||||||||| ||||||| ||| |||
Sbjct: 10720110 tccgggaaccggagcggctggccgacgacgttgaacagcgtggcgcggttgccggagccc 10720169
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| ||||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 10720170 ttgaacggcgtcgtcccgtgcagcagctcgtacaggaacacgccgaacgtccaccagtcg 10720229
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
||||||||||| || |||||||| ||||||||| || ||||||||||||||||| ||
Sbjct: 10720230 acggcgctgccgtgcccctcgccgcggatgatctccggcgccaggtactcgtgcgtgccc 10720289
Query: 694 acgaacgacatcgacc 709
||||||||||||||||
Sbjct: 10720290 acgaacgacatcgacc 10720305
>dbj|AK103656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135F07, full
insert sequence
Length = 2455
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 2085 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 2026
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 2025 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 1966
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 1965 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 1906
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 1905 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 1846
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 1845 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 1786
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 1785 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 1726
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 1725 agtgccaacaaaggacatggaccg 1702
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0686H11
Length = 135273
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 10095 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 10036
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 10035 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 9976
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 9975 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 9916
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 9915 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 9856
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 9855 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 9796
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 9795 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 9736
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 9735 agtgccaacaaaggacatggaccg 9712
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0605H02
Length = 175547
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 136130 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 136071
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 136070 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 136011
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 136010 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 135951
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 135950 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 135891
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 135890 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 135831
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 135830 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 135771
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 135770 agtgccaacaaaggacatggaccg 135747
>ref|XM_483096.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2455
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 2085 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 2026
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 2025 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 1966
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 1965 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 1906
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 1905 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 1846
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 1845 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 1786
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 1785 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 1726
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 1725 agtgccaacaaaggacatggaccg 1702
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 24031704 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 24031645
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 24031644 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 24031585
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 24031584 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 24031525
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 24031524 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 24031465
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 24031464 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 24031405
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 24031404 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 24031345
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 24031344 agtgccaacaaaggacatggaccg 24031321
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 174 bits (88), Expect = 4e-041
Identities = 310/384 (80%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 24269791 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 24269732
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 24269731 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 24269672
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 24269671 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 24269612
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 24269611 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 24269552
Query: 567 ggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtcca 626
|||||||||||||| ||||| ||||||| || || |||| ||||| || ||||||||
Sbjct: 24269551 tgatcccttgaaaggggtcttaccgaacaagagttcatacaggaatatgccaaaggtcca 24269492
Query: 627 ccagtcgacggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtg 686
||| || || || ||||| || ||||| || |||||||| || || |||| |||||| ||
Sbjct: 24269491 ccaatccacagcactgccgtgaccctctcccttgatgatttctggtgccaagtactcatg 24269432
Query: 687 cgtcccaacgaacgacatcgaccg 710
|| ||||| || ||||| |||||
Sbjct: 24269431 agtgccaacaaaggacatggaccg 24269408
>dbj|AK101944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074L09, full
insert sequence
Length = 2603
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 2261 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 2202
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 2201 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 2142
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 2141 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 2082
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 2081 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 2022
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 2021 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 1962
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1961 gccaggtactcgtgcgtccccacgaaggacattgaccg 1924
>gb|AACV01005055.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005055, whole
genome shotgun sequence
Length = 43973
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 17553 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 17494
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 17493 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 17434
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 17433 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 17374
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 17373 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 17314
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 17313 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 17254
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 17253 gccaggtactcgtgcgtccccacgaaggacattgaccg 17216
>ref|XM_467102.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2602
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 2260 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 2201
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 2200 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 2141
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 2140 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 2081
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 2080 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 2021
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 2020 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 1961
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1960 gccaggtactcgtgcgtccccacgaaggacattgaccg 1923
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1003_B06
Length = 131956
Score = 170 bits (86), Expect = 7e-040
Identities = 275/338 (81%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccgtggctccacgc 432
||||||||||| || |||||||| |||||||| |||||||||||||| | ||| ||||||
Sbjct: 14553 atgagcgcccagttgacgccctcgaagaaggggtgctgcttgatctcggcggcgccacgc 14494
Query: 433 ttgtaggccagccgttgctggggctccttcacaagcagacccctgatcagatccctcgcc 492
|| | | ||||| ||||| ||||| ||||| || || |||||||| || |||||| |
Sbjct: 14493 ttcacgccgagccgctgctgcggctctttcaccaggaggcccctgatgaggtccctcccg 14434
Query: 493 gagaagctgacggccgggtactccgggaagcgcagctgctggccaatgacattgaacagc 552
| | |||| | ||| |||||||||| ||||||||||| || | || |||||||||
Sbjct: 14433 gcgtagctcgtcgacggcgactccgggaaccgcagctgctgcccgaccacgttgaacagc 14374
Query: 553 gtggcccggttgctggatcccttgaaaggcgtcttcccgaacagcagctcgtacaagaat 612
||||| ||||||| || |||||||| |||||||| ||| | || ||||||| | |||
Sbjct: 14373 gtggcgcggttgcccgaccccttgaacggcgtcttgccgtagaggagctcgtggaggaag 14314
Query: 613 accccgaaggtccaccagtcgacggcgctgccatggccctcgcctttgatgatctcgggg 672
| ||||| ||||||||||| ||||||||||| ||||| || || ||||||||||| ||
Sbjct: 14313 atgccgaacgtccaccagtccacggcgctgccgtggccttcccccttgatgatctccggc 14254
Query: 673 gccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|||||||||||||||||||| ||||| ||||| |||||
Sbjct: 14253 gccaggtactcgtgcgtccccacgaaggacattgaccg 14216
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0556A05
Length = 158189
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 137294 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 137235
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 137234 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 137175
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 137174 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 137115
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 137114 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 137055
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 137054 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 136995
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 136994 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 136942
>gb|AACV01020253.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020253, whole
genome shotgun sequence
Length = 20888
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Plus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 2309 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 2368
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 2369 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 2428
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 2429 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 2488
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 2489 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 2548
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 2549 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 2608
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 2609 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 2661
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 3980373 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 3980314
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 3980313 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 3980254
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 3980253 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 3980194
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 3980193 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 3980134
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 3980133 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 3980074
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 3980073 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 3980021
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0463G11
Length = 154188
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 3306 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 3247
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 3246 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 3187
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 3186 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 3127
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 3126 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 3067
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 3066 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 3007
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 3006 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 2954
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 7585967 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 7585908
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 7585907 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 7585848
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 7585847 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 7585788
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 7585787 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 7585728
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 7585727 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 7585668
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 7585667 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 7585615
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 17059778 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 17059719
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 17059718 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 17059659
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 17059658 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 17059599
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 17059598 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 17059539
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 17059538 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 17059479
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 17059478 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 17059426
Score = 52.0 bits (26), Expect = 4e-004
Identities = 107/134 (79%)
Strand = Plus / Plus
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
|||||||| ||||| || || || || || |||||||||| || || ||||||||||||
Sbjct: 3786908 ttgaaaggtgtcttgccaaaaagaagttcatacaagaatatgccaaaagtccaccagtcg 3786967
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| || || ||||| ||||| || || || ||||| || |||| |||||| || || |||
Sbjct: 3786968 acagcacttccatgcccctcaccctttataatctcaggtgccaagtactcatgggtgcca 3787027
Query: 694 acgaacgacatcga 707
|| || ||||||||
Sbjct: 3787028 acaaatgacatcga 3787041
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 153 bits (77), Expect = 2e-034
Identities = 284/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 18288570 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 18288511
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 18288510 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 18288451
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 18288450 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 18288391
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || |||| || ||||||||||| ||||| || ||||
Sbjct: 18288390 acgacattgaagagcgtcgctcgattgcctgaacccttgaaaggggtcttgccaaacaat 18288331
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 18288330 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 18288271
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 18288270 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 18288218
Score = 52.0 bits (26), Expect = 4e-004
Identities = 107/134 (79%)
Strand = Plus / Plus
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
|||||||| ||||| || || || || || |||||||||| || || ||||||||||||
Sbjct: 4329399 ttgaaaggtgtcttgccaaaaagaagttcatacaagaatatgccaaaagtccaccagtcg 4329458
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| || || ||||| ||||| || || || ||||| || |||| |||||| || || |||
Sbjct: 4329459 acagcacttccatgcccctcaccctttataatctcaggtgccaagtactcatgggtgcca 4329518
Query: 694 acgaacgacatcga 707
|| || ||||||||
Sbjct: 4329519 acaaatgacatcga 4329532
>gb|C96919.1|C96919 C96919 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50122_12Z, mRNA sequence
Length = 648
Score = 145 bits (73), Expect = 4e-032
Identities = 221/269 (82%), Gaps = 1/269 (0%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 403 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 344
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 343 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 284
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 283 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 224
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 223 tggggattccgggaaccgcag-ggctggccaacaacattgaagagtgtagcccggtttcc 165
Query: 567 ggatcccttgaaaggcgtcttcccgaaca 595
|||||||||||||| ||||| |||||||
Sbjct: 164 tgatcccttgaaaggggtcttaccgaaca 136
>dbj|AK100536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N17, full
insert sequence
Length = 2366
Score = 145 bits (73), Expect = 4e-032
Identities = 283/353 (80%)
Strand = Plus / Minus
Query: 358 gggcttgcgcaccttatgagcgcccaattcacgccctcaaagaagggatgctgcttgatc 417
||||| ||||| |||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct: 2071 gggctcgcgcatcttatgagcgcccagttgacaccctcaaagaatggatgctgttttatc 2012
Query: 418 tccgtggctccacgcttgtaggccagccgttgctggggctccttcacaagcagacccctg 477
|| || || |||||||||||| | || || ||||| || ||||| || |||| |||||
Sbjct: 2011 tcagtagccccacgcttgtagccaagtcggtgctgagggtccttgaccagcaatcccctt 1952
Query: 478 atcagatccctcgccgagaagctgacggccgggtactccgggaagcgcagctgctggcca 537
|||| ||||| ||||||||||| || ||| | || ||||| |||| ||||||||
Sbjct: 1951 atcatgtcccttgccgagaagctcactattggggattctgggaaccgcaagggctggcca 1892
Query: 538 atgacattgaacagcgtggcccggttgctggatcccttgaaaggcgtcttcccgaacagc 597
| ||||||||| ||||| || || || | || ||||||||||| ||||| || ||||
Sbjct: 1891 acgacattgaagagcgtcgctcgatttcctgaacccttgaaaggggtcttgccaaacaat 1832
Query: 598 agctcgtacaagaataccccgaaggtccaccagtcgacggcgctgccatggccctcgcct 657
||||| |||||||||| || ||||||||||| || || || ||||||||||||||||||
Sbjct: 1831 agctcatacaagaatatgccaaaggtccaccaatccaccgcactgccatggccctcgcct 1772
Query: 658 ttgatgatctcgggggccaggtactcgtgcgtcccaacgaacgacatcgaccg 710
|| || || || ||||||| |||||| || || || ||||| ||||| |||||
Sbjct: 1771 ttaattatttctggggccaagtactcatgggtgccgacgaaggacatggaccg 1719
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
sequence
Length = 132927
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||||||||||| | ||| |||||||||||||||||||| | |||
Sbjct: 104536 tccgggaaccggagctgctggccgacgacgttgaacagcgtggcccggttcgtctgcccc 104477
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| | ||| ||| ||||||| || ||| |||||||| |||||||||||
Sbjct: 104476 ttgaacggcgtcctgccgtacatgagctcgtgcaggaacaccccgaacgtccaccagtcc 104417
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| |||||||| || || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 104416 accgcgctgccgtgcccttcccccttgatgatctccggcgccaggtactcgtgcgtcccc 104357
Query: 694 acgaacgacatcgaccg 710
|||||||||||||||||
Sbjct: 104356 acgaacgacatcgaccg 104340
Score = 58.0 bits (29), Expect = 7e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccg 421
||||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct: 104677 atgagcgcccagttgacgccgtcgaagaaggggtgctgcttgatctccg 104629
>ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative protein kinase
(OSJNBb0089A17.15), mRNA
Length = 1956
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||||||||||| | ||| |||||||||||||||||||| | |||
Sbjct: 1601 tccgggaaccggagctgctggccgacgacgttgaacagcgtggcccggttcgtctgcccc 1542
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| | ||| ||| ||||||| || ||| |||||||| |||||||||||
Sbjct: 1541 ttgaacggcgtcctgccgtacatgagctcgtgcaggaacaccccgaacgtccaccagtcc 1482
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| |||||||| || || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 1481 accgcgctgccgtgcccttcccccttgatgatctccggcgccaggtactcgtgcgtcccc 1422
Query: 694 acgaacgacatcgaccg 710
|||||||||||||||||
Sbjct: 1421 acgaacgacatcgaccg 1405
Score = 58.0 bits (29), Expect = 7e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccg 421
||||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct: 1742 atgagcgcccagttgacgccgtcgaagaaggggtgctgcttgatctccg 1694
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||||||||||| | ||| |||||||||||||||||||| | |||
Sbjct: 3595226 tccgggaaccggagctgctggccgacgacgttgaacagcgtggcccggttcgtctgcccc 3595167
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| | ||| ||| ||||||| || ||| |||||||| |||||||||||
Sbjct: 3595166 ttgaacggcgtcctgccgtacatgagctcgtgcaggaacaccccgaacgtccaccagtcc 3595107
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| |||||||| || || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 3595106 accgcgctgccgtgcccttcccccttgatgatctccggcgccaggtactcgtgcgtcccc 3595047
Query: 694 acgaacgacatcgaccg 710
|||||||||||||||||
Sbjct: 3595046 acgaacgacatcgaccg 3595030
Score = 58.0 bits (29), Expect = 7e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccg 421
||||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct: 3595367 atgagcgcccagttgacgccgtcgaagaaggggtgctgcttgatctccg 3595319
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||||||||||| | ||| |||||||||||||||||||| | |||
Sbjct: 21672632 tccgggaaccggagctgctggccgacgacgttgaacagcgtggcccggttcgtctgcccc 21672573
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| | ||| ||| ||||||| || ||| |||||||| |||||||||||
Sbjct: 21672572 ttgaacggcgtcctgccgtacatgagctcgtgcaggaacaccccgaacgtccaccagtcc 21672513
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| |||||||| || || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 21672512 accgcgctgccgtgcccttcccccttgatgatctccggcgccaggtactcgtgcgtcccc 21672453
Query: 694 acgaacgacatcgaccg 710
|||||||||||||||||
Sbjct: 21672452 acgaacgacatcgaccg 21672436
Score = 58.0 bits (29), Expect = 7e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccg 421
||||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct: 21672773 atgagcgcccagttgacgccgtcgaagaaggggtgctgcttgatctccg 21672725
Score = 42.1 bits (21), Expect = 0.42
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 679 tactcgtgcgtcccaacgaacgacatcgaccgtgcgt 715
||||||||||| || |||||||| ||||||||||||
Sbjct: 7560428 tactcgtgcgtgccgacgaacgagctcgaccgtgcgt 7560392
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 514 tccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgctggatccc 573
|||||||| || ||||||||||| | ||| |||||||||||||||||||| | |||
Sbjct: 21684295 tccgggaaccggagctgctggccgacgacgttgaacagcgtggcccggttcgtctgcccc 21684236
Query: 574 ttgaaaggcgtcttcccgaacagcagctcgtacaagaataccccgaaggtccaccagtcg 633
||||| |||||| | ||| ||| ||||||| || ||| |||||||| |||||||||||
Sbjct: 21684235 ttgaacggcgtcctgccgtacatgagctcgtgcaggaacaccccgaacgtccaccagtcc 21684176
Query: 634 acggcgctgccatggccctcgcctttgatgatctcgggggccaggtactcgtgcgtccca 693
|| |||||||| || || || || ||||||||||| || ||||||||||||||||||||
Sbjct: 21684175 accgcgctgccgtgcccttcccccttgatgatctccggcgccaggtactcgtgcgtcccc 21684116
Query: 694 acgaacgacatcgaccg 710
|||||||||||||||||
Sbjct: 21684115 acgaacgacatcgaccg 21684099
Score = 58.0 bits (29), Expect = 7e-006
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 373 atgagcgcccaattcacgccctcaaagaagggatgctgcttgatctccg 421
||||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct: 21684436 atgagcgcccagttgacgccgtcgaagaaggggtgctgcttgatctccg 21684388
Score = 42.1 bits (21), Expect = 0.42
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 679 tactcgtgcgtcccaacgaacgacatcgaccgtgcgt 715
||||||||||| || |||||||| ||||||||||||
Sbjct: 7564627 tactcgtgcgtgccgacgaacgagctcgaccgtgcgt 7564591
>gb|AACV01018773.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018773, whole
genome shotgun sequence
Length = 57386
Score = 141 bits (71), Expect = 6e-031
Identities = 209/255 (81%)
Strand = Plus / Plus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 57131 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 57190
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 57191 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 57250
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 57251 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 57310
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 57311 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 57370
Query: 567 ggatcccttgaaagg 581
||||||||||||||
Sbjct: 57371 tgatcccttgaaagg 57385
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 141 bits (71), Expect = 6e-031
Identities = 209/255 (81%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 15500924 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 15500865
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 15500864 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 15500805
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 15500804 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 15500745
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 15500744 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 15500685
Query: 567 ggatcccttgaaagg 581
||||||||||||||
Sbjct: 15500684 tgatcccttgaaagg 15500670
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 141 bits (71), Expect = 6e-031
Identities = 209/255 (81%)
Strand = Plus / Minus
Query: 327 ctcgatctcgacaggctttggtacctccggtgggcttgcgcaccttatgagcgcccaatt 386
||||| ||| || ||||| |||| ||| || |||||||| || | |||||||||||||||
Sbjct: 23102930 ctcgagctcaactggcttgggtatctcaggagggcttgcacatcgtatgagcgcccaatt 23102871
Query: 387 cacgccctcaaagaagggatgctgcttgatctccgtggctccacgcttgtaggccagccg 446
||||||||||||||| ||||||||||| |||||||| || |||||||||||||| || ||
Sbjct: 23102870 cacgccctcaaagaatggatgctgctttatctccgtcgccccacgcttgtaggcaagacg 23102811
Query: 447 ttgctggggctccttcacaagcagacccctgatcagatccctcgccgagaagctgacggc 506
||||| || ||||| || |||| || || ||||| ||||| || |||||||| ||
Sbjct: 23102810 gtgctgcgggtccttgaccagcaatcctcttatcaggtccctggctgagaagctcaccat 23102751
Query: 507 cgggtactccgggaagcgcagctgctggccaatgacattgaacagcgtggcccggttgct 566
||| | |||||||| ||||| ||||||||| |||||||| || || |||||||| |
Sbjct: 23102750 tggggattccgggaaccgcaggggctggccaacaacattgaagagtgtagcccggtttcc 23102691
Query: 567 ggatcccttgaaagg 581
||||||||||||||
Sbjct: 23102690 tgatcccttgaaagg 23102676
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 931,374
Number of Sequences: 438736
Number of extensions: 931374
Number of successful extensions: 5758
Number of sequences better than 0.5: 154
Number of HSP's better than 0.5 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4739
Number of HSP's gapped (non-prelim): 967
length of query: 735
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 714
effective length of database: 2,791,206,460
effective search space: 1992921412440
effective search space used: 1992921412440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)